Phvul.009G020300.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum OX=3888 GN=PETE PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 3.042e-69 Identity = 126/168 (75.00%), Postives = 138/168 (82.14%), Query Frame = 1 Query: 1 MAAVTSAAVAIPSFTGLKASGPTXXXXXXXX-XXXPQAPRFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MA VTS VAIPSF+GLK + TKVSA A S Q+PR ++ASLKD G A+VATAASAVLASNA+A+EVLLG+ DG L FVPS V +GE IVFKNNAGFPHNVVFDEDEIPAGVDA KISMPEE+LLNAPGETY V LD KGTY FYCSPHQGAGMVG+VTVN Sbjct: 1 MATVTSTTVAIPSFSGLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.491e-66 Identity = 122/170 (71.76%), Postives = 133/170 (78.24%), Query Frame = 1 Query: 1 MAAVTSAAVAIPSFTGLKASGPTXXXXXXXXXXXPQAP---RFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MA VTSAAVAIPSFTGLKA + + + A R +KASLKD+GA V ATA SA+LASNAMALEVLLG DGSL F+P FSV +GEKI FKNNAGFPHNVVFDEDEIPAGVDA KISM EE+LLNA GETY VTL KGTY+FYC+PHQGAGMVGKVTVN Sbjct: 1 MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS_PHAVU (Plastocyanin OS=Phaseolus vulgaris OX=3885 GN=PETE PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.735e-66 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 Query: 208 EVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 EVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN Sbjct: 2 EVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 99
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS_SILLB (Plastocyanin, chloroplastic OS=Silene latifolia subsp. alba OX=52853 GN=PETE PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 9.275e-66 Identity = 121/168 (72.02%), Postives = 132/168 (78.57%), Query Frame = 1 Query: 1 MAAVTS-AAVAIPSFTGLKASGPTXXXXXXXXXXXPQAPRFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MA VTS AAVAIPSF GLKAS T+ + V V+ P R IKASLKD+G V ATAA+ +LA NAMA EVLLGS DG L FVPS+ S+ SGEKI FKNNAGFPHNVVFDEDE+PAGVD KISMPEE+LLNAPGE Y VTL KGTY FYC+PH GAGMVGKVTVN Sbjct: 1 MATVTSSAAVAIPSFAGLKASSTTRAATVKVAVATP---RMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 2.767e-65 Identity = 125/168 (74.40%), Postives = 140/168 (83.33%), Query Frame = 1 Query: 1 MAAVTSAAVAIPSFTGLKA-SGPTXXXXXXXXXXXPQAPRFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MA VTSAAV+IPSFTGLKA S +A+ KVS PR IKAS+KD+GAAVVATAASA++ASNAMA++VLLG+ DGSL FVPSEFS+ GEKIVFKNNAGFPHN+VFDED IP+GVDA KISM EE+LLNA GET+ V L KG YSFYCSPHQGAGMVGKVTVN Sbjct: 1 MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 1.239e-64 Identity = 124/168 (73.81%), Postives = 141/168 (83.93%), Query Frame = 1 Query: 1 MAAVTSAAVAIPSFTGLKA-SGPTXXXXXXXXXXXPQAPRFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MAAVTSAAV+IPSFTGLKA S +A+ KVS PR IKASLK++GAAVVATAASA++ASNAMA++VLLG+ DGSL FVPSEFSVP+GEKIVFKNNAGFPHNV+FDED +P+GVD KISM EE+LLNA GET+ V L KG Y+FYCSPHQGAGMVGKV VN Sbjct: 1 MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT112 PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 2.496e-64 Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = 1 Query: 1 MAAVTSAAVAIPSFTGLKASGPTXXXXXXXXXXXPQAPRFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MA+VTSA VAIPSFTGLKAS + ++ + +P+ +K+SLK+ G A VA AAS LA NAMA+EVLLG GDGSL F+P++FS+ GEKIVFKNNAG+PHNVVFDEDEIP+GVD KISM E++LLN GETY V L GTYSFYC+PHQGAGMVGKVTVN Sbjct: 1 MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PETE PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 9.511e-63 Identity = 117/171 (68.42%), Postives = 131/171 (76.61%), Query Frame = 1 Query: 1 MAAVTSAAVAIPSFTGLK---ASGPTXXXXXXXXXXXPQAP-RFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MAA+TSA V IPSFTGLK +S P +S + S +AP + +K+SLKD G VATAAS VLA NAMA+EVLLGS DGSL FVPSEF+V GEKIVFKNNAGFPHNVVFDEDEIP+GVDA KISM E LLN GETY VTL G+Y FYC+PHQGAGMVGK+TV Sbjct: 1 MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTVK 171
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 1.218e-61 Identity = 115/154 (74.68%), Postives = 129/154 (83.77%), Query Frame = 1 Query: 40 FTGLKASGPTXXXXXXXXXXXPQAPRFGIKASLKDLGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 FTGLKASG K + A + + PR +KASLK++GAAVVATAA+ +LA NAMA+EVLLG GDGSL F+P +FSV SGE+IVFKNNAGFPHNVVFDEDEIP+GVDA KISM EE+LLNAPGETY VTL KGTY FYCSPHQGAGMVGKVTVN Sbjct: 15 FTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis OX=64177 GN=PETE PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.616e-59 Identity = 114/169 (67.46%), Postives = 130/169 (76.92%), Query Frame = 1 Query: 1 MAAVTSAAVAIPSFTGLKA-SGPTXXXXXXXXXXXPQAPRFGIKASLKD-LGXXXXXXXXXXXXXXXXXXXEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 501 MA++TSAAV IPSFTGLKA PT S + P F +KAS K+ +G A+VATAA AVLASNA+A+EVLLG DGSL FVPS V +GE +VFKNNAGFPHNV+FDEDE+P GVDA ISM EE+LLNAPGET+ VTL KGTYS YCSPHQGAGM GK+TVN Sbjct: 1 MASLTSAAVTIPSFTGLKAGRAPTTPSTSIKP---PTPMSFSVKASFKEAIGTALVATAAGAVLASNALAVEVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIYCSPHQGAGMAGKITVN 166 The following BLAST results are available for this feature:
BLAST of Phvul.009G020300.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.009G020300.1_Pv_G19833_v2.1 >Phvul.009G020300.1_Pv_G19833_v2.1 ID=Phvul.009G020300.1_Pv_G19833_v2.1; Name=Phvul.009G020300.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=168bpback to top mRNA from alignment at Chr09:4000040..4001216- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.009G020300.1_Pv_G19833_v2.1 ID=Phvul.009G020300.1_Pv_G19833_v2.1; Name=Phvul.009G020300.1; organism=Phaseolus vulgaris; type=mRNA; length=1177bp; location=Sequence derived from: Chr09:4000040..4001216- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr09:4000040..4001216- >Phvul.009G020300.1_Pv_G19833_v2.1 ID=Phvul.009G020300.1_Pv_G19833_v2.1; Name=Phvul.009G020300.1; organism=Phaseolus vulgaris; type=CDS; length=504bp; location=Sequence derived from: Chr09:4000040..4001216- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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