Phvul.009G059900.1

Transcript Overview
NamePhvul.009G059900.1
Unique NamePhvul.009G059900.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr09supercontigChr09:10960538..10961354 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL056Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL559Pisum sativum Cameor genome v1aPisum sativum
pspvL697Pisum sativum Cameor genome v1aPisum sativum
pvvuR783Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR790Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0514Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0670Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL591Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL410Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL517Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL1305Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0389Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0444Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL252Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL864Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvvfhR803Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR838Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR797Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR833Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR732Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR759Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR679Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR706Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR911Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR951Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjpvL622Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL816Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ccapvL719Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR850Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR893Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR912Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR872Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR929Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR890Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR909Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvunR727Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR736Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.02G034200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_019210Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.2g201200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cc_v2.0_15205.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
evm.model.Chr09.1288Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat5g016320.1Pisum sativum Cameor genome v1aPisum sativum
XM_058924763.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Tiffany.R1.2g163720.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_14596.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun09g247700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Ca_04933Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_12375Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014643906.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan09g026000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_14105.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vum_02G00293.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun09g247700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va04G069220.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg55851.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.009G059900Phvul.009G059900_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.009G059900.1Phvul.009G059900.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.009G059900.1_Pv_G19833_v2.1Phvul.009G059900.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.009G059900.1.v2.1.five_prime_UTR.1Phvul.009G059900.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.009G059900.1.v2.1.CDS.1Phvul.009G059900.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.009G059900.1.v2.1.three_prime_UTR.1Phvul.009G059900.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Phvul.009G059900.1 vs.
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

protein sequence of Phvul.009G059900.1_Pv_G19833_v2.1

>Phvul.009G059900.1_Pv_G19833_v2.1 ID=Phvul.009G059900.1_Pv_G19833_v2.1; Name=Phvul.009G059900.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=233bp
MRRFQRKLNLENIFHLFNVGAAILLFSHSFSFPITLQTLSHLHHTLISLF
HNSFYAFLLLNAIILFLFALSNNNNKNNNSNNNVGACTDLYNEILNHDES
RLIVTAPQEQPRTAEKEFEETVTAVTETTTACSCTTVTTVTEGEAVSVSE
KKRYRRVQSESYERRMVVAAARGELKRWKTVGLRRPFESELRCVEELSEE
EFNRAVEEFIAVHKRMQWEEQLTQNLACTPPN*
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mRNA from alignment at Chr09:10960538..10961354+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.009G059900.1_Pv_G19833_v2.1 ID=Phvul.009G059900.1_Pv_G19833_v2.1; Name=Phvul.009G059900.1; organism=Phaseolus vulgaris; type=mRNA; length=817bp; location=Sequence derived from: Chr09:10960538..10961354+ (Phaseolus vulgaris
GCCAATGCCATGAGAAGGTTCCAAAGAAAACTAAACCTCGAAAACATCTT
TCATTTGTTCAACGTTGGTGCCGCAATTTTGCTCTTCTCACACTCCTTTT
CCTTCCCCATCACCCTCCAAACACTCTCCCATCTCCACCACACATTAATT
TCACTCTTCCACAATTCTTTCTACGCTTTTCTTCTCCTAAACGCCATTAT
CCTCTTCCTCTTCGCACTCTCCAATAACAACAACAAAAACAATAATAGCA
ACAACAACGTTGGTGCCTGCACTGATCTCTACAACGAAATCCTCAACCAC
GACGAGTCTCGCCTCATCGTAACCGCGCCACAGGAACAACCTCGTACCGC
GGAGAAAGAATTCGAGGAAACTGTCACGGCAGTTACCGAGACGACGACGG
CGTGCAGTTGTACAACAGTGACAACGGTGACGGAGGGAGAGGCGGTTTCA
GTGTCGGAGAAGAAGCGGTACCGGAGAGTCCAGTCGGAGAGTTACGAGCG
GCGGATGGTGGTTGCGGCAGCGCGGGGAGAGTTAAAGAGATGGAAGACGG
TGGGATTGAGGAGGCCGTTTGAGAGTGAATTGCGGTGCGTGGAAGAGTTG
AGTGAAGAGGAATTCAATCGTGCGGTTGAGGAATTCATCGCTGTGCATAA
GAGAATGCAATGGGAGGAACAACTAACACAGAATTTGGCATGCACTCCCC
CAAATTAAAAAAAAATGAAAAAATAAATAAATAAATTAGGGGATTAGAGA
AGGATATAATTTATTTTTCATTTTCCATTTTTCATCCACTATTGTACAGT
AATTTATCCAATTTCTG
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Coding sequence (CDS) from alignment at Chr09:10960538..10961354+

>Phvul.009G059900.1_Pv_G19833_v2.1 ID=Phvul.009G059900.1_Pv_G19833_v2.1; Name=Phvul.009G059900.1; organism=Phaseolus vulgaris; type=CDS; length=699bp; location=Sequence derived from: Chr09:10960538..10961354+ (Phaseolus vulgaris
ATGAGAAGGTTCCAAAGAAAACTAAACCTCGAAAACATCTTTCATTTGTT
CAACGTTGGTGCCGCAATTTTGCTCTTCTCACACTCCTTTTCCTTCCCCA
TCACCCTCCAAACACTCTCCCATCTCCACCACACATTAATTTCACTCTTC
CACAATTCTTTCTACGCTTTTCTTCTCCTAAACGCCATTATCCTCTTCCT
CTTCGCACTCTCCAATAACAACAACAAAAACAATAATAGCAACAACAACG
TTGGTGCCTGCACTGATCTCTACAACGAAATCCTCAACCACGACGAGTCT
CGCCTCATCGTAACCGCGCCACAGGAACAACCTCGTACCGCGGAGAAAGA
ATTCGAGGAAACTGTCACGGCAGTTACCGAGACGACGACGGCGTGCAGTT
GTACAACAGTGACAACGGTGACGGAGGGAGAGGCGGTTTCAGTGTCGGAG
AAGAAGCGGTACCGGAGAGTCCAGTCGGAGAGTTACGAGCGGCGGATGGT
GGTTGCGGCAGCGCGGGGAGAGTTAAAGAGATGGAAGACGGTGGGATTGA
GGAGGCCGTTTGAGAGTGAATTGCGGTGCGTGGAAGAGTTGAGTGAAGAG
GAATTCAATCGTGCGGTTGAGGAATTCATCGCTGTGCATAAGAGAATGCA
ATGGGAGGAACAACTAACACAGAATTTGGCATGCACTCCCCCAAATTAA
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