Phvul.009G106300.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: SIP_ARATH (Signal peptide peptidase OS=Arabidopsis thaliana OX=3702 GN=SPP PE=2 SV=1) HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0 Identity = 280/339 (82.60%), Postives = 311/339 (91.74%), Query Frame = 1 Query: 1 MKKTERIANLALTGLTLAPLVVKVDPNLNVILTACLTVFVGCYRSVKPTPPTETMSNEHAMRFPFVGSAMXXXXXXXXXXXXXDLVNTVLTGYFFVLGIVALSATILPFIKRFLPKNWNEDTIVWRFPYFRSLEIEFTRSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSVRPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESKAANSPEEDDKSSKKVE 1017 MK ER ANLAL GLTLAPLVV+V+PNLNVILTAC+TV+VGC+RSVK TPPTETMS EHAMRFP VGSAMLLSLFLLFKFLSKDLVN VLT YFFVLGIVALSAT+LP I+RFLP WN++ IVWRFPYF+SLE+EFT+SQVVAGIPGTFFCAWYA +KHWLANNILGL+FCIQGIEMLSLGSFKTGAILLAGLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPT D++RP+SMLGLGDIVIPGIFVALALRFDVSR +QPQYF SAF+GY VG++LTI+VMNWFQAAQPALLYIVP+VIGFLA+HCIWNGD+K LL FDESK + ++ K+S++V Sbjct: 1 MKNCERFANLALAGLTLAPLVVRVNPNLNVILTACITVYVGCFRSVKDTPPTETMSKEHAMRFPLVGSAMLLSLFLLFKFLSKDLVNAVLTAYFFVLGIVALSATLLPAIRRFLPNPWNDNLIVWRFPYFKSLEVEFTKSQVVAGIPGTFFCAWYAWKKHWLANNILGLSFCIQGIEMLSLGSFKTGAILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTGDALRPYSMLGLGDIVIPGIFVALALRFDVSRRRQPQYFTSAFIGYAVGVILTIVVMNWFQAAQPALLYIVPAVIGFLASHCIWNGDIKPLLAFDESKTEEATTDESKTSEEVN 339
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: SIP2_ORYSJ (Signal peptide peptidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SPP2 PE=2 SV=1) HSP 1 Score: 529.635 bits (1363), Expect = 0.000e+0 Identity = 273/343 (79.59%), Postives = 298/343 (86.88%), Query Frame = 1 Query: 1 MKKTERIANLALTGLTLAPLVVKVDPNLNVILTACLTVFVGCYRSVKPTPPTETMSNEHAMRFPFVGSAMXXXXXXXXXXXXXDLVNTVLTGYFFVLGIVALSATILPFIKRFLPKNWNEDTIVWRFPYFRSLEIEFTRSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSVRPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESK----AANSPEEDDKSSKKVE 1017 MK ER ANLAL GL+LAPLVVKV+PN NVILTACL V+VGCYRSVKPTPP ETMS EHAMRFP VGSAMLLSLFLLFKFLSKDLVNTVLT YFF+LGI AL AT+LP IKRFLPK WN++ IVWR P F SL +EFTRSQVVA IPG FFC WYA +KHWLANN+LG++FCIQGIEMLSLGSFKTGAILL+GLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPT D+ RPFSMLGLGDIVIPGIFVALALRFDVSRG + +YF SAF+GYTVGL +TIIVMNWFQAAQPALLYIVP VIGF+A HC+WNG+VK LLE++ESK A + D K +KK E Sbjct: 1 MKTHERAANLALAGLSLAPLVVKVNPNANVILTACLAVYVGCYRSVKPTPPAETMSKEHAMRFPLVGSAMLLSLFLLFKFLSKDLVNTVLTAYFFILGIAALCATLLPSIKRFLPKEWNDNAIVWRAPLFHSLSVEFTRSQVVASIPGFFFCIWYAAKKHWLANNVLGISFCIQGIEMLSLGSFKTGAILLSGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTGDAARPFSMLGLGDIVIPGIFVALALRFDVSRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQAAQPALLYIVPGVIGFVAVHCLWNGEVKPLLEYNESKAEEEEACEEDTDSKQNKKKE 343
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: SIP1_ORYSJ (Signal peptide peptidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPP1 PE=2 SV=1) HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0 Identity = 271/343 (79.01%), Postives = 299/343 (87.17%), Query Frame = 1 Query: 1 MKKTERIANLALTGLTLAPLVVKVDPNLNVILTACLTVFVGCYRSVKPTPPTETMSNEHAMRFPFVGSAMXXXXXXXXXXXXXDLVNTVLTGYFFVLGIVALSATILPFIKRFLPKNWNEDTIVWRFPYFRSLEIEFTRSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSVRPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESK----AANSPEEDDKSSKKVE 1017 MK ER ANLAL GL+LAPLVVKV+PN+NVILTACL V+VGCYRSVKPTPP+ETMS EHAMRFP VGSAMLLSLFLLFKFLSKDLVN VLT YFF+LGI AL AT+LP IKRFLPK WN++ IVW P+F SL +EFT+SQVVA IPG FFC WYA +KHWLANN+LG++FCIQGIEMLSLGSFKTGAILLAGLF YDIFWVFFTPVMVSVAKSFDAPIKLLFPT D+ RPFSMLGLGDIVIPGIFVALALRFDVSRG + +YF SAF+GYTVGL +TIIVMNWFQAAQPALLYIVP VIGF+A HC+WNG+VK LLE++ESK A + D K +KK E Sbjct: 1 MKTHERAANLALAGLSLAPLVVKVEPNVNVILTACLAVYVGCYRSVKPTPPSETMSKEHAMRFPLVGSAMLLSLFLLFKFLSKDLVNAVLTAYFFILGIAALCATLLPSIKRFLPKEWNDNAIVWCAPFFHSLSVEFTKSQVVASIPGFFFCIWYAAKKHWLANNVLGISFCIQGIEMLSLGSFKTGAILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTGDAARPFSMLGLGDIVIPGIFVALALRFDVSRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQAAQPALLYIVPGVIGFVAVHCLWNGEVKPLLEYNESKAEEEDAVEEDTDSKQNKKEE 343
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: HM13_MOUSE (Minor histocompatibility antigen H13 OS=Mus musculus OX=10090 GN=Hm13 PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 6.687e-76 Identity = 145/316 (45.89%), Postives = 195/316 (61.71%), Query Frame = 1 Query: 85 NVILTACLTVFVGCYRSVK------PTPPTETMSNEHAMRFPFVGSAMXXXXXXXXXXXXXDLVNTVLTGYFFVLGIVALSATILPFIKRFLPKNWNEDTIVWRFPYFRS------LEIEFTRSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPT--------ADSVRPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQ-YFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESK 969 +++L A L +F G RSV+ + ET+++ A RFP + S LL L+L FK S++ +N +L+ YFFVLGI+ALS TI PF+ +F P N+ F + EF +V + WY LRKHW+ANN+ GLAF + G+E+L L + TG ILL GLF+YDIFWVF T VMV+VAKSF+APIKL+FP AD+ F+MLGLGDIVIPGIF+AL LRFD+S K YF ++F Y GL LTI +M+ F+ AQPALLY+VP+ IGF + G+V ++ ++ES Sbjct: 38 SLLLMALLPIFFGALRSVRCARGKSSSDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTISPFMNKFFPANFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSVVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEKGLEADN---FAMLGLGDIVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVAEMFSYEESN 350
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: HM13_HUMAN (Minor histocompatibility antigen H13 OS=Homo sapiens OX=9606 GN=HM13 PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 2.623e-74 Identity = 144/333 (43.24%), Postives = 199/333 (59.76%), Query Frame = 1 Query: 85 NVILTACLTVFVGCYRSVK------PTPPTETMSNEHAMRFPFVGSAMXXXXXXXXXXXXXDLVNTVLTGYFFVLGIVALSATILPFIKRFLPKNWNEDTIVWRFPYFRS------LEIEFTRSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPT-----ADSVRPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQ-YFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESKAAN------SPEEDDKSSKK 1011 +++L A L +F G RSV+ + ET+++ A RFP + S LL L+L FK S++ +N +L+ YFFVLGI+ALS TI PF+ +F P ++ F + EF +V + WY LRKHW+ANN+ GLAF + G+E+L L + TG ILL GLF+YD+FWVF T VMV+VAKSF+APIKL+FP F+MLGLGD+VIPGIF+AL LRFD+S K YF ++F Y GL LTI +M+ F+ AQPALLY+VP+ IGF + G+V ++ ++ES + S E + S+ K Sbjct: 38 SLLLMALLPIFFGALRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTESKEGTEASASK 370
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: IMP2_CAEEL (Intramembrane protease 2 OS=Caenorhabditis elegans OX=6239 GN=imp-2 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.100e-48 Identity = 102/226 (45.13%), Postives = 132/226 (58.41%), Query Frame = 1 Query: 400 EIEFTRSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSVR-------PFSMLGLGDIVIPGIFVALALRFD------VSRGKQPQ-------YFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESKAANSPEEDDK--SSKK 1011 +I+F R ++A + + + L++HW+ NNI+G++F I GIE L L SFK G++LL GLF YDIFWVF T VM SVAK DAPI L FP D R SMLGLGDIVIPGIF+AL RFD + K PQ YF V Y GL +T+ VM+ F+AAQPALLY+VP + + G++ L +DES+ ++ E K S KK Sbjct: 242 KIDFDRYDIIALLMCSPILISHLLKRHWITNNIIGVSFSILGIERLHLASFKAGSLLLVGLFFYDIFWVFGTDVMTSVAKGIDAPILLQFPQ-DIYRNGIMEASKHSMLGLGDIVIPGIFIALLRRFDYRVVQTTAESKAPQGSLKGRYYFVVTVVAYMAGLFITMAVMHHFKAAQPALLYLVPCCLFVPLLLAVIRGELSALWNYDESRHVDNEENRKKVDSGKK 466
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: YL8H_SCHPO (Probable intramembrane protease C25B8.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC25B8.17 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.326e-42 Identity = 104/311 (33.44%), Postives = 161/311 (51.77%), Query Frame = 1 Query: 97 TACLTVFVGCYRSVKPTPPTET--MSNEHAMRFPFVGSAMXXXXXXXXXXXXXDLVNTVLTGYFFVLGIVALSATILPFIKRFLPKNWNEDTIVWRFPYFRSLEIEFTRSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSVRPFSMLGLGDIVIPGIFVALALRFD----VSRGKQPQ----YFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESKAANSPEEDDK 999 +A TV++G S + P E ++ A+ FP G L+ ++L ++LSK+ + +L GY A A+I+ F++ F PK T ++ A + +Y KHW+A+NIL A I ++ + S+ TGA+LL LF YDI++VF T VMV+VA D P K + P + SMLGLGDIV+PG+ +AL RFD ++ QP+ YF++ F+ Y +GL +T + +F+AAQPALLY+ P+ I + ++K L F S+ + +E DK Sbjct: 9 SALFTVYIGAKWSAQEEEPEEKQLINKRLAVLFPIFGGVTLVLMYLALRYLSKEYIQLILQGY-------ASLASIICFVRSFNPKT--------------------TFGKITATMSSIAIALFYFKTKHWMASNILAWALAANSISIMRIDSYNTGALLLGALFFYDIYFVFGTEVMVTVATGIDIPAKYVLPQFKNPTRLSMLGLGDIVMPGLMLALMYRFDLHYYINSTSQPKKHSTYFRNTFIAYGLGLGVTNFALYYFKAAQPALLYLSPACIVAPLLTAWYRDELKTLFSF-RSETEDETDEQDK 291
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: YKK0_YEAST (Probable intramembrane protease YKL100C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YKL100C PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.891e-29 Identity = 77/197 (39.09%), Postives = 106/197 (53.81%), Query Frame = 1 Query: 481 WLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFP----TADSVRPFSMLGLGDIVIPGIFVALALRFDVSRGKQP---------------QYFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPS-VIGFLAAHCIWNGDVKQLLEFDESKAANSPEEDDKSSKK 1011 WL +N + + I I L L + K+GA++L LF YDI +VF T VMV+VA + D P+KL P TA + FS+LGLGDI +PG+F+A+ ++D+ + +YF +A V Y LV ++ ++ F AQPALLYIVPS +I + C WN D KQ F E DKS KK Sbjct: 329 WLISNAVSMNMAIWSIAQLKLKNLKSGALILIALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQNNFNFSILGLGDIALPGMFIAMCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALLYIVPSLLISTILVAC-WNKDFKQFWNFQYDTI-----EVDKSLKK 519
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: SIPL1_ORYSJ (Signal peptide peptidase-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPPL1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.850e-26 Identity = 83/223 (37.22%), Postives = 108/223 (48.43%), Query Frame = 1 Query: 391 RSLEIEFTRSQ--VVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTP------VMVSVA------------------------KSFDAPIKLLFPTA--------DSVRPFSMLGLGDIVIPGIFVALALRFDVSR------------GKQPQYFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVIG 903 R FTR Q +VA GT AW + HWL NN+LG++ CI + + L + K A+LL LFVYD+FWVFF+ VMVSVA K + P+KL+FP + S + MLGLGD+ IPG+ +AL L FD + KQ +Y A GY VGLV + Q+ QPALLY+VPS +G Sbjct: 119 RCCSKPFTRLQGLLVAICVGTVV-AWL-VSGHWLLNNLLGISICIAFVSHVRLPNIKICALLLVCLFVYDVFWVFFSERFFGANVMVSVATQKASNPVHTVANKLSLPGLQLITKKLELPVKLVFPRSLMGGLAPGSSPGDYMMLGLGDMAIPGMLLALVLSFDHRKIKDMSVSQDMPPSKQRKYVWYALTGYGVGLVTALAAGILSQSPQPALLYLVPSTLG 339
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Match: SPP2B_CHICK (Signal peptide peptidase-like 2B OS=Gallus gallus OX=9031 GN=SPPL2B PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.034e-25 Identity = 76/247 (30.77%), Postives = 115/247 (46.56%), Query Frame = 1 Query: 265 VLTGYFFVLGIVALSATILPFIKRF------LPKNWNEDTIVWRFPYFRSLEIEFTRSQVVAGIPGTFFCA----WYALRKH----WLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSF---------------DAPIKLLFPTADSV------RPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFVGYTVGLVLTIIVMNWFQAAQPALLYIVPSVI 900 V+ G F + + L + + PF++RF +P N PYF R QV + F + W R W+ + LG+AFC+ ++ + L +FK +LL LFVYD+F+VF TP + +S P+ L P +S RPFS+LG GDI++PG+ VA RFD+ YF + + Y +GL++T + + Q QPALLY+VP + Sbjct: 246 VIIGIFCLAASIGLYSCLSPFVRRFPLGKCRIPDN--------NLPYFHK------RPQVRILLLAVFCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTL 478 The following BLAST results are available for this feature:
BLAST of Phvul.009G106300.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.009G106300.2_Pv_G19833_v2.1 >Phvul.009G106300.2_Pv_G19833_v2.1 ID=Phvul.009G106300.2_Pv_G19833_v2.1; Name=Phvul.009G106300.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=340bpback to top mRNA from alignment at Chr09:16494747..16499995+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.009G106300.2_Pv_G19833_v2.1 ID=Phvul.009G106300.2_Pv_G19833_v2.1; Name=Phvul.009G106300.2; organism=Phaseolus vulgaris; type=mRNA; length=5249bp; location=Sequence derived from: Chr09:16494747..16499995+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr09:16494747..16499995+ >Phvul.009G106300.2_Pv_G19833_v2.1 ID=Phvul.009G106300.2_Pv_G19833_v2.1; Name=Phvul.009G106300.2; organism=Phaseolus vulgaris; type=CDS; length=1020bp; location=Sequence derived from: Chr09:16494747..16499995+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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