Phvul.010G132400.1

Transcript Overview
NamePhvul.010G132400.1
Unique NamePhvul.010G132400.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10supercontigChr10:41436317..41438160 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR065Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR088Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL277Pisum sativum Cameor genome v1aPisum sativum
pvvuR074Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR105Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0146Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL187Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caipvL0875Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL798Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL809Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL681Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL686Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0491Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1277Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0016Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0019Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0255Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0364Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0412Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1352Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL597Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL796Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR087Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR106Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR103Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR097Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR116Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR068Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR091Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR138Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL650Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL655Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL178Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL228Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL568Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL004Cicer arietinum
carpvL654Cicer arietinum
carpvL659Cicer arietinum
ccapvL157Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL159Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL730Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR094Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR099Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR131Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR153Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR102Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR131Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR094Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR099Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR124Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR068Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR092Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR069Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR102Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_10032Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.01G492100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.01G341400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan04g012400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_02G02368.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_03883.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Tiffany.R1.4g047480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun03g395900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_11595Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_07119Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun10g166600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_09G01289.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014660585.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat04G0576500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.4g060800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cc_v2.0_18832.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_018255Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_01G03696.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_27683.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.09G115100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.02G210700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va01G094670.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
XM_058890972.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va04G005390.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va11G004540.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun10g166600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_18165.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
LR48_mrnaVigan07g140200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004510381.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014646301.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cc_v2.0_25548.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.09G196900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun03g395900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-KK1_004141Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_26071Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr03.1519Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr10.1000999Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.003G132700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr03.1000788Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.009G229000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.010G132400Phvul.010G132400_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.010G132400.1Phvul.010G132400.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.010G132400.1_Pv_G19833_v2.1Phvul.010G132400.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.010G132400.1.v2.1.three_prime_UTR.2Phvul.010G132400.1.v2.1.three_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR
Phvul.010G132400.1.v2.1.three_prime_UTR.1Phvul.010G132400.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.010G132400.1.v2.1.CDS.5Phvul.010G132400.1.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.010G132400.1.v2.1.CDS.4Phvul.010G132400.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.010G132400.1.v2.1.CDS.3Phvul.010G132400.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.010G132400.1.v2.1.CDS.2Phvul.010G132400.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.010G132400.1.v2.1.CDS.1Phvul.010G132400.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.010G132400.1.v2.1.five_prime_UTR.1Phvul.010G132400.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


Homology
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: VPS2A_ARATH (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS2.1 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 6.379e-110
Identity = 192/226 (84.96%), Postives = 204/226 (90.27%), Query Frame = 1
Query:    1 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSELLXXXXXXXXXXXXXXXXRVAQAESTGHEDS-GIDDDLQARLNNLRKM 675
            M+ +FG RKTPAELLRENKRMLDKSIREIERERQGLQ QEKKLI EIKK AKQGQMGAVK+MAKDLIRTRHQI+KFYKLKSQLQGVSLRIQTLKSTQ MGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKME+VSEVM DAIDDALEGDEEEEETE+LV+QVLDEIGIDIN EL+   A +     PAA N+V QAE+TG EDS GID DLQARL+NLRKM
Sbjct:    2 MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELV--NAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRKM 225          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: CM2A2_DICDI (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum OX=44689 GN=chmp2a2 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.085e-70
Identity = 116/178 (65.17%), Postives = 149/178 (83.71%), Query Frame = 1
Query:    7 FLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSELL 540
            FLFG +KTP E+LREN+R L+KS+REI+RER  LQNQEKK+I++IKK AKQGQM + K+MAKDL+RTR+ I KFY++K+QLQ VSLRIQTL+STQ M EAMKGVTKAM  MNRQMNLP   KIM EFE+Q++KM++  E+M D +D  +E D EEE+++ ++NQVLDEIGID+ S+L+
Sbjct:    2 FLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLV 179          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: CHM2A_DANRE (Charged multivesicular body protein 2a OS=Danio rerio OX=7955 GN=chmp2a PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.244e-60
Identity = 116/224 (51.79%), Postives = 165/224 (73.66%), Query Frame = 1
Query:    1 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSELLXXXXXXXXXXXXXXXXRVAQAESTGHEDSGIDDDLQARLNNLRK 672
            M  LFG RKTP E+LR+N+R L++++R+++RERQ L+ QEKK+I +IKK AKQGQM AVK+MAKDL+RTR  + KF  +++ +Q VSL+IQTLKS   M +AMKGVTKAM  MNRQ+ LP +QKIM EFERQ+E M++  E+M DAIDDA+  +++EEE++ +V+QVLDE+G+ ++ EL  +    +  +   A  + A+ + T  +    D DL+ RLNNLR+
Sbjct:    1 MESLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLSDEL--SNLPATGGSLSVAAGKKAEPQPTLAD---ADADLEERLNNLRR 219          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: CHM2A_XENTR (Charged multivesicular body protein 2a OS=Xenopus tropicalis OX=8364 GN=chmp2a PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.661e-60
Identity = 106/179 (59.22%), Postives = 144/179 (80.45%), Query Frame = 1
Query:    1 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSEL 537
            M FLFG RKTP E+LR+N+R L+K++RE++RERQ L+ QEKK+I +IKK AKQGQM AVK+MAKDL+RTR  + KF  +++ +Q VSL+IQTLKS   M +AMKGVTKAM  MNRQ+ LP +QKIM EFE+Q+E M++  E+M DAIDDA+  +++EEE++ +V+QVLDE+G+ +  EL
Sbjct:    1 MEFLFGRRKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDEL 179          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: CHM2A_XENLA (Charged multivesicular body protein 2a OS=Xenopus laevis OX=8355 GN=chmp2a PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.701e-60
Identity = 106/179 (59.22%), Postives = 144/179 (80.45%), Query Frame = 1
Query:    1 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSEL 537
            M FLFG RKTP ELLR+N+R L++++RE++RERQ L+ QEKK+I +IKK AKQGQM AVK+MAKDL+RTR  + KF  +++ +Q VSL+IQTLKS   M +AMKGVTKAM  MNRQ+ LP +QKIM EFE+Q+E M++  E+M DAIDDA+  +++EEE++ +V+QVLDE+G+ +  EL
Sbjct:    1 MEFLFGRRKTPEELLRQNQRALNRAMRELDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDEL 179          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: CHM2A_HUMAN (Charged multivesicular body protein 2a OS=Homo sapiens OX=9606 GN=CHMP2A PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.158e-60
Identity = 107/179 (59.78%), Postives = 143/179 (79.89%), Query Frame = 1
Query:    1 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSEL 537
            M  LFG RKTP ELLR+N+R L++++RE++RERQ L+ QEKK+I +IKK AKQGQM AV++MAKDL+RTR  + KF  +++ +Q VSL+IQTLKS   M +AMKGVTKAMG MNRQ+ LP +QKIM EFERQ E M++  E+M DAIDDA+  +E+EEE++ +V+QVLDE+G+ +  EL
Sbjct:    1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDEL 179          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: CHM2A_MOUSE (Charged multivesicular body protein 2a OS=Mus musculus OX=10090 GN=Chmp2a PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.790e-60
Identity = 107/179 (59.78%), Postives = 143/179 (79.89%), Query Frame = 1
Query:    1 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSEL 537
            M  LFG RKTP ELLR+N+R L++++RE++RERQ L+ QEKK+I +IKK AKQGQM AV++MAKDL+RTR  + KF  +++ +Q VSL+IQTLKS   M +AMKGVTKAMG MNRQ+ LP +QKIM EFERQ E M++  E+M DAIDDA+  +E+EEE++ +V+QVLDE+G+ +  EL
Sbjct:    1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDEL 179          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: CHM2A_CHICK (Charged multivesicular body protein 2a OS=Gallus gallus OX=9031 GN=CHMP2A PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.685e-51
Identity = 104/179 (58.10%), Postives = 141/179 (78.77%), Query Frame = 1
Query:    1 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSEL 537
            M  LFG RKTP ELLR+N+R L +++RE++RERQ L+ QEKK+I++IKK AKQGQM AVK+MAKDL+RTR  + KF  +++ +Q VSL+IQTLKS   M  AMKGVTKAM  MNRQ+ LP +QKIM EFE+Q   M++  E+M DAIDDA+  +++EEE++ +V+QVLDE+G+++  EL
Sbjct:    1 MDLLFGRRKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDEL 179          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: DID4_YEAST (DOA4-independent degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DID4 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 4.330e-47
Identity = 102/225 (45.33%), Postives = 151/225 (67.11%), Query Frame = 1
Query:    7 FLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXX-XXXXXXXXXXNLVNQVLDEIGIDINSELLXXXXXXXXXXX-XXXXXRVAQAESTGHEDSG-IDDDLQARLNNLRK 672
            ++FG   TP E L++N+R L+++ RE+ERE++ L+ Q+KKL+ EIKK+AK GQ+ A K+ AKDL+RTR+ I KF  +K+QLQ +SLRIQ ++S+  M  +M   T  +  MNR MNLP LQ+I  EFE+Q++ M    E M++AID+ + +  +E+EE + +VN+VLDEIG+D+NS+L + P +             + +    G E  G  DDDLQARLN L+K
Sbjct:    6 WVFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQLQSTPQNLVSNAPIAETAMGIPEPIGAGSEFHGNPDDDLQARLNTLKK 230          
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Match: DID4_SCHPO (ESCRT-III complex subunit did4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=did4 PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.261e-38
Identity = 79/178 (44.38%), Postives = 123/178 (69.10%), Query Frame = 1
Query:    4 SFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXNLVNQVLDEIGIDINSEL 537
            S+LFG  K+P E LR ++R L ++ RE++RER  L  +E+ LI EIK +AK G  GA ++ A+DL+R R+   K    K+QLQ +SLR+QT+++++ M ++M+G T+ +  MN+ MN+P++ +I Q+FER+NE ME   E M D   D    +++EEE + LVN+VLDEIG+D++  L
Sbjct:    5 SWLFGGGKSPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARIQARDLMRLRNSRKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPAMARITQQFERENEIMEQRQE-MIDENMDDALEEDDEEEADELVNKVLDEIGVDLSQGL 181          
The following BLAST results are available for this feature:
BLAST of Phvul.010G132400.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
VPS2A_ARATH6.379e-11084.96Vacuolar protein sorting-associated protein 2 homo... [more]
CM2A2_DICDI1.085e-7065.17Charged multivesicular body protein 2a homolog 2 O... [more]
CHM2A_DANRE2.244e-6051.79Charged multivesicular body protein 2a OS=Danio re... [more]
CHM2A_XENTR3.661e-6059.22Charged multivesicular body protein 2a OS=Xenopus ... [more]
CHM2A_XENLA3.701e-6059.22Charged multivesicular body protein 2a OS=Xenopus ... [more]
CHM2A_HUMAN4.158e-6059.78Charged multivesicular body protein 2a OS=Homo sap... [more]
CHM2A_MOUSE4.790e-6059.78Charged multivesicular body protein 2a OS=Mus musc... [more]
CHM2A_CHICK1.685e-5158.10Charged multivesicular body protein 2a OS=Gallus g... [more]
DID4_YEAST4.330e-4745.33DOA4-independent degradation protein 4 OS=Saccharo... [more]
DID4_SCHPO5.261e-3844.38ESCRT-III complex subunit did4 OS=Schizosaccharomy... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..146
NoneNo IPR availableCOILSCoilCoilcoord: 12..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..203
IPR005024Snf7 familyPFAMPF03357Snf7coord: 17..184
e-value: 5.9E-43
score: 146.4

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.010G132400.1_Pv_G19833_v2.1

>Phvul.010G132400.1_Pv_G19833_v2.1 ID=Phvul.010G132400.1_Pv_G19833_v2.1; Name=Phvul.010G132400.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=226bp
MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKN
AKQGQMGAVKMMAKDLIRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQVMG
EAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMEDAIDDA
LEGDEEEEETENLVNQVLDEIGIDINSELLNAPASTSVTTAPAANNRVAQ
AESTGHEDSGIDDDLQARLNNLRKM*
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mRNA from alignment at Chr10:41436317..41438160-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.010G132400.1_Pv_G19833_v2.1 ID=Phvul.010G132400.1_Pv_G19833_v2.1; Name=Phvul.010G132400.1; organism=Phaseolus vulgaris; type=mRNA; length=1844bp; location=Sequence derived from: Chr10:41436317..41438160- (Phaseolus vulgaris
AAATTGTTTATGCAAACTAGAAGAGTGAGAGTAAGAGGTGTTATCAAAAT TTGTGAGGCAAAACACAAGACACTGAAGAAAGGGTCTCTTGGTTCGAACC AACATGAGTTTTCTGTTCGGCAATAGAAAGACTCCCGCTGGTATCGTTTT TGTGATTACTTTCATTGAATAGAGAAAATTTTTGTTTGCATTCCCAGTTT AAAAAGATTGTGTCTTTAACTTGAATTGGGAATTGGGTTGGTTTGTTATT TGTGATAGAGCTTTTGAGGGAGAACAAAAGAATGCTGGACAAGTCCATTA GAGAAATTGAAAGGGAAAGGCAAGGCTTGCAGAATCAAGAAAAGAAGTTG ATTGTGGAGATTAAGAAGAATGCCAAACAAGGGCAGATGGTATCATTTAT TTATTTATTATGTTTCATTGTTATTTTGCATTCTTATGATGTTTGTGTCT GAGGATAAAGGTTGTTGCTTTTAAAGATTGTGATTTAGTGTACTGGGGTA GTGATGTCTAGGGTTCAGTTTACTTCATCGGGTATACTATGAGATAGATT TTGGTTATTGTTCAGAATTAAAACTGTTTTTTGGGGTTGCTTGAATTTGC TAGGGGGCAGTGAAAATGATGGCCAAGGATCTCATCAGGACTCGCCATCA GATTGACAAGTTTTACAAGCTCAAATCGCAACTTCAGGGTGTTTCCTTGA GAATTCAGGTTTGTTTTTGTGCGTTTTCATTGTTAAATTGCTGAACTTGA AAGTCTCCTCATGCTCAATCTGGTTTCTTGGAAACTAGCTGATAGTTTAA ATTAGTATATATGTTTAGCATTGTGTTAACTTGCACATTCTGAGCTTCAT GGGAAATAATAATAAACAAATGTTAAGTGGTTATGTTGCAGCAACTGTTT GTACTTTTAGTTGTCAAGTGATGAATTGATGTTGTTATGGCAATAATTTG TTTTGGAGGATTCCCAAAATTCACAATGTAGAAGGTCTGTTGATGCACAA GGCCACGGTACATCCATGGTCGTGTGCATCACTACTGTAGCTAGCGTGTT TTATGTCTTTCAGTTTAATTTAATCCAACCTACCTTACAATGTTAGAGTA TGTAATGTTTAAAAAGGACTCTGATGTCAATTTCAGACACTAAAATCCAC TCAAGTAATGGGGGAGGCTATGAAAGGAGTTACTAAAGCAATGGGTCAAA TGAATAGGCAGATGAATTTGCCTTCGTTACAGAAGATAATGCAAGAGTTT GAAAGGCAGAATGAGAAGATGGAACTGGTTTCTGAGGTAATGGAAGATGC AATTGACGATGCTTTGGAAGGTGATGAAGAGGAGGAAGAGACAGAAAATC TTGTCAATCAAGTTCTCGATGAGATCGGAATCGATATCAACTCTGAGGTA AGAAGTTATCAGAAAATAACTAGTTATAGATGATCAGGTTTATCATACTC CTAGCCGGATAAAAGTAAAAGTAATAATGACAATATGTATTTCATCTGTT CTATTTGCAGCTTCTGAATGCACCTGCATCAACCTCTGTCACTACTGCAC CAGCAGCAAATAACAGGGTTGCTCAAGCTGAATCAACCGGCCATGAAGAC AGTGGAATAGATGACGATCTACAGGCTAGGTTAAATAATCTGAGAAAGAT GTGAAGAGTCCGAGAGGAAGGTCTTCAAAGAACCACGAAAATAATGATTG TATATGAAATTAGGATGTGTTTTTTTTTTTTTTTTGCTATTATGTCTGAA GCTAACATGAATATGTAAAGAGTAATATCAGAAGTTGAATTTCATGAAAA GGATTTGTTAATTGTAAACTGTTTATCTCGTCTTTGTTTTTTAT
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Coding sequence (CDS) from alignment at Chr10:41436317..41438160-

>Phvul.010G132400.1_Pv_G19833_v2.1 ID=Phvul.010G132400.1_Pv_G19833_v2.1; Name=Phvul.010G132400.1; organism=Phaseolus vulgaris; type=CDS; length=678bp; location=Sequence derived from: Chr10:41436317..41438160- (Phaseolus vulgaris
ATGAGTTTTCTGTTCGGCAATAGAAAGACTCCCGCTGAGCTTTTGAGGGA
GAACAAAAGAATGCTGGACAAGTCCATTAGAGAAATTGAAAGGGAAAGGC
AAGGCTTGCAGAATCAAGAAAAGAAGTTGATTGTGGAGATTAAGAAGAAT
GCCAAACAAGGGCAGATGGGGGCAGTGAAAATGATGGCCAAGGATCTCAT
CAGGACTCGCCATCAGATTGACAAGTTTTACAAGCTCAAATCGCAACTTC
AGGGTGTTTCCTTGAGAATTCAGACACTAAAATCCACTCAAGTAATGGGG
GAGGCTATGAAAGGAGTTACTAAAGCAATGGGTCAAATGAATAGGCAGAT
GAATTTGCCTTCGTTACAGAAGATAATGCAAGAGTTTGAAAGGCAGAATG
AGAAGATGGAACTGGTTTCTGAGGTAATGGAAGATGCAATTGACGATGCT
TTGGAAGGTGATGAAGAGGAGGAAGAGACAGAAAATCTTGTCAATCAAGT
TCTCGATGAGATCGGAATCGATATCAACTCTGAGCTTCTGAATGCACCTG
CATCAACCTCTGTCACTACTGCACCAGCAGCAAATAACAGGGTTGCTCAA
GCTGAATCAACCGGCCATGAAGACAGTGGAATAGATGACGATCTACAGGC
TAGGTTAAATAATCTGAGAAAGATGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport