rna-TanjilR_04399
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGFC_ARATH (Rop guanine nucleotide exchange factor 12 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF12 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 8.256e-111 Identity = 85/111 (76.58%), Postives = 102/111 (91.89%), Query Frame = 3
Query: 1416 LLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKST--WSSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFN 1742
L +NGRASLGD +Y++ITV+FFDPDQFLS+MD+SSEHKI+DLKN+IEASI+IWKRKM KD+KS+ W+S VSLEKRE+FEERAETILL+LK R+PGI QS+LDISKIQFN
Sbjct: 293 LPKNGRASLGDQMYKNITVDFFDPDQFLSSMDMSSEHKIVDLKNRIEASIIIWKRKMVYKDNKSSAPWASGVSLEKREVFEERAETILLILKQRYPGISQSSLDISKIQFN 403 HSP 2 Score: 140.198 bits (352), Expect = 8.256e-111 Identity = 67/91 (73.63%), Postives = 77/91 (84.62%), Query Frame = 2
Query: 1055 CLDNFKDQNEFYYVSKDSEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPK 1327
CL+NFKDQ+EF Y+SKDS D D +NDEKWW+PT KVP +GLS+ +R+FLQYQKD VNQVLKAAMAINAQVL EMEIPESYI+SLPK
Sbjct: 209 CLENFKDQSEFSYISKDSPDLDG----KRNDEKWWIPTVKVPPDGLSEASRRFLQYQKDCVNQVLKAAMAINAQVLFEMEIPESYIDSLPK 295 HSP 3 Score: 99.3673 bits (246), Expect = 8.256e-111 Identity = 42/54 (77.78%), Postives = 50/54 (92.59%), Query Frame = 2
Query: 614 SASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
+AS+FGEQRRLEPM AER++RWRKEIDWLLSVTDY+VE PSQQK+KDG+ ME+
Sbjct: 130 AASVFGEQRRLEPMPAERRARWRKEIDWLLSVTDYVVEFAPSQQKNKDGTNMEI 183 HSP 4 Score: 49.2914 bits (116), Expect = 8.256e-111 Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
IMTTRQRTDL MNIPAL KLDAMLI
Sbjct: 183 IMTTRQRTDLHMNIPALKKLDAMLI 207 HSP 5 Score: 102.834 bits (255), Expect = 1.493e-21 Identity = 71/137 (51.82%), Postives = 82/137 (59.85%), Query Frame = 2
Query: 2003 QDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQAQNSVGRRSNARSSVSKPSSREEVIDKGSVET-PGSMTLLDFMGWGADQGGAVLTKKESFAASDDFHKELDSKQQKLQNVVTNKKVSYLENLGVMRSPTSRH 2410
+DVGQAVLESYSRILESLA+TVLSRIDDVL+AD R N R++ P EE ET GSMTL DFMGW DQ + + D KE KL +VVT KK SYLE LG ++SPT+RH
Sbjct: 404 EDVGQAVLESYSRILESLAYTVLSRIDDVLEAD--------RAGNKRNT---PLEAEE-------ETLVGSMTLSDFMGWDFDQAANAELESKKDLPDDPLIKE------KL-SVVTTKKTSYLETLGGVKSPTARH 515 HSP 6 Score: 73.9442 bits (180), Expect = 2.443e-12 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 3
Query: 363 SEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAG 485
++MEQMKERF+KLLLGED SGGGKGVSSALALSNA TNLA
Sbjct: 91 ADMEQMKERFSKLLLGEDNSGGGKGVSSALALSNAITNLAA 131
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGF9_ARATH (Rop guanine nucleotide exchange factor 9 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF9 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.825e-101 Identity = 100/185 (54.05%), Postives = 129/185 (69.73%), Query Frame = 3
Query: 1416 LLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKSTWSSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNRVRACPISNLSYIQYLHTCE*Q*RGSFGLKI*SH--NMIYVHIFFILCCTISESNKLGRVI*YTSSISVDMLE*SG 1964
L +NGR SLGDS+Y+SIT E+FDP+QFLST+DLS+EHK+LD+KN+IEASIVIWKRK++ KD+KS+W SAVSLEKRELFEERAETIL+LLK +FPG+PQS+LDISKIQ+N+ + SY + L S G S +++Y CT E++ G++ T S S SG
Sbjct: 278 LPKNGRVSLGDSLYKSITEEWFDPEQFLSTLDLSTEHKVLDVKNRIEASIVIWKRKLHLKDNKSSWGSAVSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQYNKDVGHAVLE-SYSRILE--------SLGYTEMSRIDDVLYADSLARKQCTGEETSDGGKIATETDSASAGSSNYSG 453 HSP 2 Score: 120.939 bits (302), Expect = 3.825e-101 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 2
Query: 1055 CLDNFKDQNEFYYVSKDSEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPK 1327
LDNF+ NEF+YVS+DSE+ + + D KWWLP KVP GLS+ AR+ L +QKDSV+QV KAAMAINAQVL+EM IP+SYIESLPK
Sbjct: 191 TLDNFRGHNEFWYVSRDSEEGKQARNERTKD-KWWLPPVKVPPNGLSESARRMLHFQKDSVSQVQKAAMAINAQVLSEMAIPDSYIESLPK 280 HSP 3 Score: 83.9593 bits (206), Expect = 3.825e-101 Identity = 37/54 (68.52%), Postives = 47/54 (87.04%), Query Frame = 2
Query: 614 SASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
+ASIFGEQ +L+PMA +R++RW+KEIDWLLSVTD+IVE VPSQQ SK+G E+
Sbjct: 112 AASIFGEQTKLQPMAPDRRARWKKEIDWLLSVTDHIVEFVPSQQISKEGVCTEI 165 HSP 4 Score: 47.7506 bits (112), Expect = 3.825e-101 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
IM TRQR DLLMNIPAL KLDAMLI
Sbjct: 165 IMVTRQRGDLLMNIPALRKLDAMLI 189 HSP 5 Score: 73.559 bits (179), Expect = 3.457e-12 Identity = 61/149 (40.94%), Postives = 73/149 (48.99%), Query Frame = 2
Query: 2003 QDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQAQNSV--------GRRSNARSSVSKPSS--REEVIDKGSVETPGSMTLLDFMGWGADQGGAVLTKKESFAASDDFHKELDSKQQKLQNVVTNKKVSY---LENLGVMRSPTSRH 2410
+DVG AVLESYSRILESL +T +SRIDDVL AD A+ G+ + S S SS E I+K + TLLDF+GW SD+ K K K +T KK+SY LENL RSP RH
Sbjct: 387 KDVGHAVLESYSRILESLGYTEMSRIDDVLYADSLARKQCTGEETSDGGKIATETDSASAGSSNYSGEEIEKLESQNSSKTTLLDFIGW-----------------SDNSSKGQSEKPPKSPR-MTPKKLSYLEKLENLNGFRSPKDRH 517 HSP 6 Score: 72.4034 bits (176), Expect = 7.559e-12 Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 3
Query: 363 SEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAG 485
SE E MK+RF KLLLGEDMSGGGKGVSSALALSNA TNLA
Sbjct: 73 SETEMMKDRFTKLLLGEDMSGGGKGVSSALALSNAITNLAA 113
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGFB_ARATH (Rop guanine nucleotide exchange factor 11 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF11 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 2.672e-60 Identity = 67/91 (73.63%), Postives = 77/91 (84.62%), Query Frame = 2
Query: 1055 CLDNFKDQNEFYYVSKDSEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPK 1327
CLD FKDQ+EFYYV KDS DS +++NDEKWWLP KVP GLS+I+R+FLQ QK+ VNQVLKAAMAINAQVL+EMEIPESY+ESLPK
Sbjct: 221 CLDKFKDQDEFYYVKKDSPDS----CETRNDEKWWLPAVKVPPNGLSEISRRFLQSQKECVNQVLKAAMAINAQVLSEMEIPESYLESLPK 307 HSP 2 Score: 89.3521 bits (220), Expect = 2.672e-60 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 2
Query: 614 SASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
+AS FGEQRRLEPMA +RK+RWR+EI WL+SV DYIVE P+QQ +KDG+ MEV
Sbjct: 142 AASAFGEQRRLEPMAVDRKTRWRREIGWLISVADYIVEFAPTQQTNKDGTSMEV 195 HSP 3 Score: 46.9802 bits (110), Expect = 2.672e-60 Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
+M+TRQRTDLL NIPAL KLDAML+
Sbjct: 195 VMSTRQRTDLLCNIPALKKLDAMLL 219 HSP 4 Score: 181.03 bits (458), Expect = 1.545e-47 Identity = 95/133 (71.43%), Postives = 103/133 (77.44%), Query Frame = 3
Query: 1347 VIAEKLVPESIF*HLFHRT*NFILLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKSTWSSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
V++E +PES L +NGRASLGD IYR ITVE FD DQFL MDLSSEHKILDLKN+IEASIVIWKRKM QKD+KS W S VS+EKRE FEERAETILLLLK FPGI QS+LDISKIQFNR
Sbjct: 291 VLSEMEIPESYLESL---------PKNGRASLGDVIYRMITVEMFDADQFLIEMDLSSEHKILDLKNRIEASIVIWKRKMVQKDTKSPWGSTVSIEKREQFEERAETILLLLKQGFPGISQSSLDISKIQFNR 414 HSP 5 Score: 85.5001 bits (210), Expect = 5.546e-16 Identity = 65/138 (47.10%), Postives = 78/138 (56.52%), Query Frame = 2
Query: 2003 QDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQAQNSVGRR-SNARSSVSKPSS-REEVIDKGSVETPGSMTLLDFMGWGADQGGAVLTKKESFAASDDFHKELDSKQQKLQNVVTNKKVSYLENLGVMRSPTSRH 2410
+DVG A+LESYSR+LESLA TV+SRI+DVL AD Q S R S+ + REE + E S TL D M WG KKESF D K L SK + + NKK SYL+NLG MRSPT+R+
Sbjct: 414 RDVGLAILESYSRVLESLAHTVMSRIEDVLYADQLTQEPTNNAPSKNRYSLKENEKLREERL--SFTEDMASGTLSDVMQWGNKNNE---MKKESFFG--DREKPLLSKVTGI--MTNNKKSSYLDNLGAMRSPTARY 542 HSP 6 Score: 77.411 bits (189), Expect = 1.942e-13 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 3
Query: 315 PALDLSISLIFMVGFNSEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAG 485
P + S S+ ++ + MEQMKE+F+KLLLGEDMSGGGKGVSSALALSNA TNLA
Sbjct: 87 PRVSSSDSMEALIILQAAMEQMKEKFSKLLLGEDMSGGGKGVSSALALSNAITNLAA 143
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGF8_ARATH (Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF8 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.375e-53 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 2
Query: 1055 CLDNFKDQNEFYYVSKDSEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPK 1327
LDNF+ NEF+YVS+DSE+ + ND KWWLP KVP GLS+ +R+ L +QKDSV QV KAAMAINAQVL+EMEIPESYI+SLPK
Sbjct: 202 TLDNFRGHNEFWYVSRDSEEGQQARNDRTND-KWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPK 291 HSP 2 Score: 83.9593 bits (206), Expect = 4.375e-53 Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 2
Query: 614 SASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
+ASIFGEQ +L+PM +R++RW+KEIDWLLSVTD+IVE VPSQQ SKDG E+
Sbjct: 123 AASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEI 176 HSP 3 Score: 47.7506 bits (112), Expect = 4.375e-53 Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
IM TRQR DLLMNIPAL KLDAMLI
Sbjct: 176 IMVTRQRGDLLMNIPALRKLDAMLI 200 HSP 4 Score: 184.496 bits (467), Expect = 6.111e-49 Identity = 89/133 (66.92%), Postives = 112/133 (84.21%), Query Frame = 3
Query: 1347 VIAEKLVPESIF*HLFHRT*NFILLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKSTWSSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
V++E +PES L +NGRASLGDSIY+SIT E+FDP+QFL+ +D+S+EHK+LDLKN+IEAS+VIWKRK++ KD+KS+W SAVSLEKRELFEERAETIL+LLK +FPG+PQS+LDISKIQFN+
Sbjct: 275 VLSEMEIPESYI---------DSLPKNGRASLGDSIYKSITEEWFDPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTKSSWGSAVSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNK 398 HSP 5 Score: 81.2629 bits (199), Expect = 1.214e-14 Identity = 63/149 (42.28%), Postives = 76/149 (51.01%), Query Frame = 2
Query: 2003 QDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQA--------QNSVGRRSNARSSVSKPSSREEVIDKGSVETPGSMTLLDFMGW--GADQGGAVLTKKESFAASDDFHKELDSKQQKLQNVVTNKKVSY---LENLGVMRSPTSRH 2410
+DVGQAVLESYSRILESLA+TV+SRI+DVL D A + S G R+ S S SS ++ P S TLLDFMGW + +GG TK + +T KK+SY LENL RSP RH
Sbjct: 398 KDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQTLLAEETSDGGRTTETDSESAGSSNSG--EEAEKHDPHSKTLLDFMGWNDNSSKGGDKPTKSPN---------------------LTPKKLSYLEKLENLNGFRSPKDRH 523 HSP 6 Score: 74.3294 bits (181), Expect = 1.746e-12 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 3
Query: 363 SEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAG 485
++ME MK+RFAKLLLGEDMSGGGKGVSSALALSNA TNLA
Sbjct: 84 ADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAA 124
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGFD_ARATH (Rop guanine nucleotide exchange factor 13 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF13 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.835e-49 Identity = 57/91 (62.64%), Postives = 74/91 (81.32%), Query Frame = 2
Query: 1055 CLDNFKDQNEFYYVSKDSEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPK 1327
CLD FKDQ+EFYYV+ S +S+ N+ ++ND+KWWLP KVP +GLS+ ++FL Q++ V QVL +AMAIN+QVLTEMEIPESYI+SLPK
Sbjct: 245 CLDKFKDQDEFYYVTPGSPESENSNS-TRNDDKWWLPIVKVPPKGLSETLKRFLLSQRECVCQVLNSAMAINSQVLTEMEIPESYIDSLPK 334 HSP 2 Score: 75.485 bits (184), Expect = 3.835e-49 Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 2
Query: 614 SASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
+AS FGE RRLE ++ ++K RWR+EI WLLSVTD+IVE P+ Q ++DGS MEV
Sbjct: 166 AASAFGEIRRLEAISEDKKERWRREIGWLLSVTDHIVEFSPTHQTNEDGSSMEV 219 HSP 3 Score: 41.2022 bits (95), Expect = 3.835e-49 Identity = 17/25 (68.00%), Postives = 22/25 (88.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
+MTT+QRTDL+ NIP+L KLD ML+
Sbjct: 219 VMTTKQRTDLVSNIPSLKKLDEMLL 243 HSP 4 Score: 150.214 bits (378), Expect = 9.705e-37 Identity = 81/135 (60.00%), Postives = 97/135 (71.85%), Query Frame = 3
Query: 1347 VIAEKLVPESIF*HLFHRT*NFILLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKST--WSSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
V+ E +PES L + GRASLGD IYR IT+E FD +QFL MDLSSEHKILDLKNK EAS+VIW+RK+ Q D+KS+ WS+ +S++KR+ EERA TIL L+K FPGI QS LDISKIQFNR
Sbjct: 318 VLTEMEIPESYIDSLPKK---------GRASLGDMIYRMITLEMFDAEQFLLEMDLSSEHKILDLKNKFEASVVIWQRKIVQIDNKSSSPWSTNLSMDKRQQLEERAATILQLIKQEFPGISQSTLDISKIQFNR 443 HSP 5 Score: 74.3294 bits (181), Expect = 2.145e-12 Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 3
Query: 354 GFNSEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAG 485
+ +E+EQMK++FAKLLLGEDMSGG KGVSSALALSNA TNLA
Sbjct: 124 AYVTELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAA 167 HSP 6 Score: 60.8474 bits (146), Expect = 3.041e-8 Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 2
Query: 2003 QDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQAQN------SVGRRSNARSSVSKPSSREEVIDKGSVETPGSMTLLDFMGWGADQG--------GAVLTKKESFAASDDFHKELDSKQQKLQNVVTNKKVSYLENLGVMRSPTS 2404
+D+G A++ESYSRILESLA TV+SRI+DVL+AD QN + S + +++ + +++L + M W + +LT+ S S+ NKK +YLE+LG RSPT+
Sbjct: 443 RDIGLAIVESYSRILESLAHTVMSRIEDVLEADQLTQNPELAMCKIHIVKETESPEKEEEPNFCLLEDRPKKQKPTISLSEVMQWNIETNEPRKEKSDKKLLTRVSSMIMSN------------------NKKTTYLESLGTTRSPTA 572
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGFA_ARATH (Rop guanine nucleotide exchange factor 10 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF10 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.187e-45 Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = 2
Query: 1055 CLDNFKDQNEFYYVSKDSEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKVRKTKTSNC*KVST*VDILTSISQNI----KFYSFAEWKSESRGFDL 1456
LDNFKDQ +F+YV +D ED+D N + DE WWLP KVP +GLS+ +R++LQ QKDSV QVLKAA AINA VL+EM +PE+YI+SLPK KT + + SI++ F SF + +E + DL
Sbjct: 161 TLDNFKDQKDFWYVPRDMEDADH-NGDWRRDENWWLPVVKVPTDGLSEESRRWLQNQKDSVAQVLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGDF--------LYKSITEESFDPDYFVSFLDLSTEHKVLDL 289 HSP 2 Score: 65.855 bits (159), Expect = 3.187e-45 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 2
Query: 620 SIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
S+FGEQ +L+PM E K WRKE+ WLLSV D+IV+ VPS+Q K+G E+
Sbjct: 84 SMFGEQMKLQPMYPETKENWRKEMGWLLSVIDHIVQFVPSRQMGKNGQFTEI 135 HSP 3 Score: 39.2762 bits (90), Expect = 3.187e-45 Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
IM T+QR DLL NIPAL KLD++L+
Sbjct: 135 IMVTKQRDDLLTNIPALRKLDSVLL 159 HSP 4 Score: 159.844 bits (403), Expect = 1.661e-40 Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 3
Query: 1347 VIAEKLVPESIF*HLFHRT*NFI--LLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQ--KDSKSTWSSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
V++E VPE N+I L +NG+ SLGD +Y+SIT E FDPD F+S +DLS+EHK+LDLKN+IEAS+VIWKRKM Q KD KS W S VSLEKRELFE RAETIL++LK +FPGIPQS+L++SKI+ N+
Sbjct: 234 VLSEMHVPE-----------NYIDSLPKNGKTSLGDFLYKSITEESFDPDYFVSFLDLSTEHKVLDLKNRIEASMVIWKRKMCQKEKDGKSQWGSTVSLEKRELFEVRAETILVMLKQQFPGIPQSSLEVSKIKNNK 359 HSP 5 Score: 80.1073 bits (196), Expect = 2.621e-14 Identity = 57/138 (41.30%), Postives = 76/138 (55.07%), Query Frame = 2
Query: 2003 QDVGQAVLESYSRILESLAFTVLSRIDDVLQADYQAQNSVGRRSNARSSVSKPSSREEVIDKGSVETPGSMTLLDFMGWGADQGGAVLTKKESFAASDDFHKELDSKQQKLQNV--VTNKKVSYLENLGVMRSPTSRH 2410
+DVGQA+LESYSR+LESLA ++SRI+DVL+AD Q + + RS S EE + ETP S L DF+GW + + K S + + FHK K++ + KK SYL L MRSP+ RH
Sbjct: 359 KDVGQAILESYSRVLESLASKIMSRIEDVLEADRLVQRQLMGEAETRSESEAESEYEETEKVVAAETPNSRKLSDFIGW---RLSSDTKKHSSMSDIEFFHKVEQEKEKPMMKSPRALPKKFSYLAKLENMRSPSDRH 493 HSP 6 Score: 67.3958 bits (163), Expect = 2.464e-10 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 3
Query: 363 SEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLA 482
S+ME MKERFAKLLLGEDMSGGG G +SALALSNA T LA
Sbjct: 43 SDMEVMKERFAKLLLGEDMSGGGTGETSALALSNAITKLA 82
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGF3_ARATH (Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF3 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.278e-41 Identity = 50/103 (48.54%), Postives = 72/103 (69.90%), Query Frame = 2
Query: 1058 LDNFKDQNEFYY-----VSKDSEDSDKGNAK----SKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKVRKT 1339
LD+F++ EF+Y +S S S G+ + + +EKWWLP P VP+EGLSD ARK L+ +++S NQ+ KAAMAIN+ +L+EMEIP+SY+ +LPK K+
Sbjct: 222 LDSFQN-TEFWYAEEGSLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKARKQLKNKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPKCGKS 323 HSP 2 Score: 95.9005 bits (237), Expect = 5.278e-41 Identity = 49/119 (41.18%), Postives = 78/119 (65.55%), Query Frame = 3
Query: 1416 LLQNGRASLGDSIYR--SITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKSTW-------SSAVSLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
L + G++S+GDSIYR S + FF P+Q L +++SSEH+ + L +++EAS+ W+RK +SK++W S+ +K + ERAET+L LK R+P + Q++LDI KIQ+N+
Sbjct: 317 LPKCGKSSVGDSIYRYMSGSGRFF-PEQLLDCLNISSEHEAVQLADRVEASMYTWRRKSCLSNSKNSWNMVKDLMSTTERTDKNYVMAERAETLLFCLKQRYPELSQTSLDICKIQYNK 434 HSP 3 Score: 61.2326 bits (147), Expect = 1.076e-12 Identity = 24/53 (45.28%), Postives = 39/53 (73.58%), Query Frame = 2
Query: 617 ASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
A++FG+ RLEP+ E+++ W++E++ LLSV DYIVE +P Q +G+ +EV
Sbjct: 143 ATVFGQNLRLEPLETEKRALWKREMNCLLSVCDYIVEFIPRCQNLSNGATVEV 195 HSP 4 Score: 35.4242 bits (80), Expect = 1.076e-12 Identity = 13/25 (52.00%), Postives = 20/25 (80.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
+M +R R D+ +N+PAL KLD+ML+
Sbjct: 195 VMESRPRADIYINLPALRKLDSMLM 219 HSP 5 Score: 65.0846 bits (157), Expect = 1.226e-9 Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 3
Query: 366 EMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNL 479
E+E MKERFAKLLLGEDMSG GKGV +A+ +SNA TNL
Sbjct: 104 ELETMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNL 141
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGF1_ARATH (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.870e-40 Identity = 46/121 (38.02%), Postives = 77/121 (63.64%), Query Frame = 3
Query: 1416 LLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSK------STWSSAVSL-----EKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
L ++G+ LG+ IY+ +T F P+ L +DLSSEH+ L++ N+IEA++ +W++K ++ K S+W V E+ + +RAET+L L+ RFPG+PQ+ LD++KIQ+N+
Sbjct: 300 LPKSGKECLGEIIYQYLTANKFSPECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRRHKKQAKLKLSSWGGKVKGLVNDNERNDFLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNK 420 HSP 2 Score: 93.9745 bits (232), Expect = 2.870e-40 Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 2
Query: 1058 LDNFKDQNEFYYVSKD------SEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPKVRK 1336
LD F D EF+Y + +DS A + ++KWWLP PKVP GLS+ ARK LQ +D NQ+LKAA+AIN+ VL EMEIP+ Y+E+LPK K
Sbjct: 208 LDAFSD-TEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSEEARKKLQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGK 305 HSP 3 Score: 65.855 bits (159), Expect = 1.549e-15 Identity = 27/54 (50.00%), Postives = 41/54 (75.93%), Query Frame = 2
Query: 614 SASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
SA++FGE RLEP+A ++K+ WR+E++WLL V+D IVE++PS Q+ G E+
Sbjct: 128 SATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTYEI 181 HSP 4 Score: 40.0466 bits (92), Expect = 1.549e-15 Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
IM TR R+DL N+PAL KLDAMLI
Sbjct: 181 IMETRPRSDLYANLPALKKLDAMLI 205 HSP 5 Score: 71.2478 bits (173), Expect = 2.002e-11 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 3
Query: 363 SEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLA 482
SE+E MKERFAKLLLGEDMSGGGKGV +ALA+SNA TNL+
Sbjct: 89 SEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLS 128
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROGF5_ARATH (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF5 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.334e-39 Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 3
Query: 1416 LLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQK----------DSKSTWSSAVSL----EKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
L +NGR+ LGD IYR +T + F + L +DLSSEH LD+ N++EASI +W+R++ K K TW L +KR L ER+ET+L LK RFP + Q++LDISKIQ+N+
Sbjct: 312 LPKNGRSCLGDVIYRYVTSDKFSAESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNK 435 HSP 2 Score: 83.5741 bits (205), Expect = 1.334e-39 Identity = 41/96 (42.71%), Postives = 64/96 (66.67%), Query Frame = 2
Query: 1058 LDNFKDQNEFYYVSKDSEDSDKGNAKS------KNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPK 1327
L +FK + EF+YV + S+ + S + +EKWWLP P++ GL++ AR L ++++ Q+LKAAMAIN+ LTEM++P+SY+E+LPK
Sbjct: 220 LASFK-KTEFWYVDQGIVASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEARTELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPK 314 HSP 3 Score: 69.3218 bits (168), Expect = 1.959e-15 Identity = 28/53 (52.83%), Postives = 43/53 (81.13%), Query Frame = 2
Query: 617 ASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
A+IFG+ RLEP+++E+K WR+E++W+LSV+D+IVE+ PS Q DG++ EV
Sbjct: 141 ATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEV 193 HSP 4 Score: 36.5798 bits (83), Expect = 1.959e-15 Identity = 15/25 (60.00%), Postives = 19/25 (76.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
+MT R R DL +N+PAL KLD ML+
Sbjct: 193 VMTCRPRFDLFINLPALRKLDNMLL 217 HSP 5 Score: 67.0106 bits (162), Expect = 3.879e-10 Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 3
Query: 360 NSEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAG 485
++++E MKERFAKLLLGEDMSG GKGV +ALA+SNA TNL
Sbjct: 100 SADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCA 141
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Match: ROFG6_ARATH (Rop guanine nucleotide exchange factor 6 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF6 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 6.710e-25 Identity = 29/53 (54.72%), Postives = 43/53 (81.13%), Query Frame = 2
Query: 617 ASIFGEQRRLEPMAAERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSQMEV 775
A+I G+Q RLEP+ +E+K WR+EI+ LLSV+D+IVE+VPS Q +G+++EV
Sbjct: 146 AAILGQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPSFQNFPNGNKIEV 198 HSP 2 Score: 60.4622 bits (145), Expect = 6.710e-25 Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 3
Query: 360 NSEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAGIYIDIL 503
SE+E +KER AKLLLGEDMSG G+GV ALA+SNA TNL Y IL
Sbjct: 105 TSEIELLKERMAKLLLGEDMSGSGEGVCPALAISNAITNL---YAAIL 149 HSP 3 Score: 33.8834 bits (76), Expect = 6.710e-25 Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query: 861 IMTTRQRTDLLMNIPALHKLDAMLI 935
+M R R+DL +PAL KLD MLI
Sbjct: 198 VMNCRPRSDLFTCLPALRKLDNMLI 222 HSP 4 Score: 105.145 bits (261), Expect = 4.623e-22 Identity = 56/149 (37.58%), Postives = 89/149 (59.73%), Query Frame = 3
Query: 1344 LVIAEKLVPESIF*HLFHRT*NFILLQNGRASLGDSIYRSITVEFFDPDQFLSTMDLSSEHKILDLKNKIEASIVIWKRKMNQ-------KDSKSTWSSAV--------SLEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNR 1745
+ +AE VP+S L +NGR+ LGD +YR+IT + F D L ++DLSSE ++++ N++EAS+ +W+R+ + + + + W V +KRE+F ERAE++L+ LK RFPG+ Q+ALD SKIQ+N+
Sbjct: 298 IALAEMEVPQSYL---------EALPKNGRSCLGDFLYRNITSDNFSADHLLESIDLSSELAVVEMANRVEASMYVWRRRAHSRHLISLYRSTSTRWGMIVKEMMMHQTDGDKREIFAERAESLLIRLKQRFPGLRQTALDTSKIQYNK 437 HSP 5 Score: 90.8929 bits (224), Expect = 1.459e-17 Identity = 41/92 (44.57%), Postives = 67/92 (72.83%), Query Frame = 2
Query: 1058 LDNFKDQNEFYYVSKD--SEDSDKGNAKSKNDEKWWLPTPKVPAEGLSDIARKFLQYQKDSVNQVLKAAMAINAQVLTEMEIPESYIESLPK 1327
LD+F + EF+YV + + +S + N+ ++ +KWWLP P+VP++GL++ RK L + ++ NQ+LKA M+IN+ L EME+P+SY+E+LPK
Sbjct: 225 LDSF-GETEFWYVDQGIVAAESARSNSFREDGDKWWLPLPRVPSDGLTEQTRKKLDHTREFTNQILKACMSINSIALAEMEVPQSYLEALPK 315 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04399 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_04399_La_Tanjil_v1.0 ID=rna-TanjilR_04399_La_Tanjil_v1.0; Name=rna-TanjilR_04399; organism=Lupinus angustifolius; type=mRNA; length=2413bpback to top protein sequence of rna-TanjilR_04399_La_Tanjil_v1.0 >rna-TanjilR_04399_La_Tanjil_v1.0 ID=rna-TanjilR_04399_La_Tanjil_v1.0; Name=rna-TanjilR_04399_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=533bpback to top mRNA from alignment at Chr_LG03-CM007363.1:1202279..1204691+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_04399_La_Tanjil_v1.0 ID=rna-TanjilR_04399_La_Tanjil_v1.0; Name=rna-TanjilR_04399; organism=Lupinus angustifolius; type=mRNA; length=2413bp; location=Sequence derived from: Chr_LG03-CM007363.1:1202279..1204691+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:1202279..1204691+ >rna-TanjilR_04399_La_Tanjil_v1.0 ID=rna-TanjilR_04399_La_Tanjil_v1.0; Name=rna-TanjilR_04399; organism=Lupinus angustifolius; type=CDS; length=1602bp; location=Sequence derived from: Chr_LG03-CM007363.1:1202279..1204691+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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