rna-TanjilR_04524

Transcript Overview
Namerna-TanjilR_04524
Unique Namerna-TanjilR_04524_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length3459
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG03-CM007363.1supercontigChr_LG03-CM007363.1:2154993..2158451 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL089Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL098Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR522Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR530Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0857Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0921Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0933Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR0917Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0729Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0944Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0989Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0784Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0799Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR0884Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0886Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0949Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0606Pisum sativum Cameor genome v1aPisum sativum
anpsR0610Pisum sativum Cameor genome v1aPisum sativum
anpsR0627Pisum sativum Cameor genome v1aPisum sativum
anpsR0662Pisum sativum Cameor genome v1aPisum sativum
anpvR0837Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0848Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0866Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0874Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0711Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0725Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0732Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0737Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0826Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0831Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0862Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0687Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0752Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0713Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0718Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0755Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0775Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0776Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0786Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0678Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0682Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0716Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0738Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0682Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0691Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0699Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0704Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0796Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0820Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0869Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0670Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0722Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0736Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0764Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0776Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0781Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0806Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0820Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0703Cicer arietinum
ancarR0760Cicer arietinum
ancarR0773Cicer arietinum
anccaR0701Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0707Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0797Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0809Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0818Vigna umbellata FF25 genome v1.0Vigna umbellata
anccaR0769Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0773Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0872Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0759Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0794Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0810Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR0805Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0815Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0820Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0830Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0851Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0878Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0892Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0882Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0897Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0679Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0690Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0697Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0703Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0879Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0888Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0907Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0915Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Ca_05972Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun04g015600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
XM_058880118.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.07G020400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va01G002590.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.002G313400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
XM_058866394.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_22937.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.005G167500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cc_v2.0_25376.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_01G00217.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan05g213400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_12969Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun04g015600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va05G054660.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014645284.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan11g082400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_15726.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_004512913.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_02825Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg9832.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014660550.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigan.11G244400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_022786243.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014654936.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun05g285700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va10G002020.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan10g015900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.07G015200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat5g298680.1Pisum sativum Cameor genome v1aPisum sativum
XM_058924550.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun03g020700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va11G001960.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_000383Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr03.828Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.004G163100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr04.1001069Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg46959.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr04.123.1.62113169Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_17578.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_09G01453.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.01G018600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.01G025900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.11G132900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Hedin2.R1.6g188880.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004503377.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun03g020700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun05g285700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.010G150200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_04387.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.1g159200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.6g145600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigst.09G131700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_004486678.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_00945.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg27420.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_23305.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_11G01611.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr05.1001199Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Psat1g042440.1Pisum sativum Cameor genome v1aPisum sativum
Ca_00183.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_07G00157.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat01G0107800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_028975Cajanus cajan Asha genome v1.0Cajanus cajan
PvulFLAVERTChr02.1833Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr10.1731Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.1g121880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat7g014240.1Pisum sativum Cameor genome v1aPisum sativum
Cr_21344.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-KK1_016109Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.5g006560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat07G0039900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_30097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_04524gene-TanjilG_04524_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04524rna-TanjilR_04524_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_04524_La_Tanjil_v1.0rna-TanjilR_04524_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2154993..2154997rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2154993..2154997Lupinus angustifoliusexon
rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2155071..2155203rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2155071..2155203Lupinus angustifoliusexon
rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2156361..2156464rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2156361..2156464Lupinus angustifoliusexon
rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157106..2157208rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157106..2157208Lupinus angustifoliusexon
rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157297..2157437rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157297..2157437Lupinus angustifoliusexon
rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157579..2158451rna-TanjilR_04524_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157579..2158451Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2154993..2154997rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2154993..2154997Lupinus angustifoliusCDS
rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2155071..2155203rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2155071..2155203Lupinus angustifoliusCDS
rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2156361..2156464rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2156361..2156464Lupinus angustifoliusCDS
rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157106..2157208rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157106..2157208Lupinus angustifoliusCDS
rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157297..2157437rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157297..2157437Lupinus angustifoliusCDS
rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157579..2158451rna-TanjilR_04524_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2157579..2158451Lupinus angustifoliusCDS


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04524 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042277Vacuolar protein sorting-associated protein IST1-likeGENE3D1.20.1260.60coord: 2..155
e-value: 8.5E-28
score: 99.1
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 3..143
e-value: 1.1E-26
score: 93.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..375

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_04524_La_Tanjil_v1.0 ID=rna-TanjilR_04524_La_Tanjil_v1.0; Name=rna-TanjilR_04524; organism=Lupinus angustifolius; type=mRNA; length=3459bp
ATGCGGTTTAACTTGTTGTAATTAGCGTTCTCTTTTTTCGTTTTacgttt
ttatttatttatttatttgatttttcagCAAATCATTGATCAAGTTGACG
AAGAATCGGATTGATGTGATAAGGAGACGGAGGAAAGCGACGGAGAGGTT
TCTGAAGAAAGACGTCGCTGAGCTATTGATGAATGGTTTAGATGCCAATG
CTTATGGAAAGGTAattgattcttttatttttgttattattttgtttggt
gCAATTTAATGTTTCGGTTATGTCAATTTTATATAATCGTTTGAGATTTC
TTGTTGAAAAGAGTATGTGATTTATGGTCTTGCTTTATTCTACTGCTAGT
CAAAGCAATGATGAACGTGTTTAGTGcaattgattattattttagttgtt
taGTGCAATTTATAGATTCGGTTATGTGAGATTCTTCACTAGAATGGATT
TCTGAGATCAATGCACCTTGCACAGGTTTGAATATTCTGTTTGTTATTTA
AGGTTGAAAAGGGCATGTGACTTAATCATGCTGGATTCTACTGCTAGTCG
AAGGATGAAGAATGCGTAATGAATTCTGAtaatcttttgttgatttaaaa
aactattttttttagtttaggATGGATCTAGAGTGTCCTTAAAAAAAGTG
GAACAAGAGTGAGATGAGAACTGTTTTCCACTTAAAGTATCTAAAAATGT
GTTCTGATAAACTATTGTAACTGTTAATGTTTGATTAAAAGCTACCATAG
ATAACTTCAAAGTGTTCCAATAATTCCTGTATTTGTAAATTGCTACACAA
TATTTTCTCAATTTAACTTTTGAATCCTTTGTTTGATATATCACGTTGAA
AAGAGTATGTGAGTATTGGTCTTGCTTAATGCTATTGCTAGTCAAAGGAT
GAAGAATGCATTCTGAATTGTGATaatcttttgttgattttgaaTGTTCG
GTTTTCTTTAGTATAGAATGGAACAAGAATGAAATGAGAACTCCTTTTCC
ACTTAGTTTTCTGTTCCGATGGTTGTGTTCTAATAATCTTTTGTAACTGT
TGTTGTTCGATTAAACAGATATTCAGTTTTGTTCCAATGGGAATTTATAC
ACTGCACATGAACTGATGTGATTAGATAGGTTTTATATTCTCTTTTACCT
TTTAGGTGTTCGTCTACACATAATTTCTGCCAAATTCAACTGATTGCAAC
TCATTTCATAATGATCCATACGCTTCTTGTTCATACTATGTATCACAGCC
CTTGATAAAAAGGGACCATATAAACCTTTAAATTGTGCAAATAATTCTtg
tatttgaaaatttcaacaCTGTATTTTCTCAATTTAACTTTTGTCTTGCT
TGTGGGGTGGTTATACAGGCTGAAGGAATCATTGTTGATTTGACATTGTC
ATCTTGTTATGATTATGTTGAGCAATCCTGTGAGTTTGTGTTGAAGCACC
TCTCAGTGCTGCAGAAGCTGAGGTATGAATATAATTGATAAAGCCATAAA
GGTAGTCTGCAAGGCTTCATGTGTCTATTATAATTGCTCATGTAGGAAAG
TAAAGTCGTGCTATTAGGtgtaaaaaaaaagtgattatgAACATGTGCAA
CAGTTGCATATTACCGGGCACCATcaacaaatatacatatttacAAATTC
TCATATGCAAATTCAACAGTCATATTCTAGGACACTTCTTTTTTGGTGGT
TAGATGAAAGAAGCAATCAATCAAGTTCTTAAACTATTCAAACTCTACCA
GATCTTTCTCATCATGTTCCTAATTTAGTTGAGTGTCtaatttcattatc
ttttttaattttcattgtcTTGTGATTTCTCTTTCTAAATCATTActcat
tatttcaaaataaaccTTGGAACCATTTCTGTCTGTCTGATAATAATTAG
ACACCCTTAACAAATCTCCCACATTGTTTTCCAGCCATTACTTTATTGGG
ATTGGATGCCAAAACCTTAGAAGcgattttgttttttttatgcaCGCAGT
GTCTAAGTATCCCTAATTCTTGTGGTTGGGtagacatttcaaacttttCC
TCATGTCAAACTAGATTactaacatcattttttttaaatcagtGAATGCC
CTCGGGAATGCAGGGAGGCCATATCCTCTTTGATGATTGCTGCTGCAAGA
TTTTCTGATCTATCAGAATTACGTGAGAGATATGGGAATTCCATAGAATG
TTATGTCAATCAAGAGGTCACTCTTCACATCTATTTTTTCCCATTAGAAT
TTTACATATTTGTGACTTATCCCTTAATTGACTCACTAAATTGCTTATCA
TCAGTTTGctgcaaatttgaatttgaagtcCGCTGCATTGGAGAAAAAGG
TCCTCTTGATGCAGGATATTGCTTCAGAGTTTTCAATAAAGTGGGACTCC
AAAGCTTTTGAGCTGAGGATGCCAAAATCCTCTGCATTTGCACAGGTGTT
GTCTTCcaccttttctctttttcacctTTGATTAGTTCCATTgtcaaatt
gaaaatatatgcaATGCTCCAAGAAGAGCGATAGAGGTTATTGGAAGCCC
GGTAGTATGCTAAAACCACTTGAATTTTCATCACAGGATAAAAAAGTGGA
AAAAATTGAAGGTGGTTCCAATCTTCATGATAGTTGGGGGAATGCCACCC
CTCTAAGAGCAAGCCAAGACACTGCAACTGCTATGAAGTCTCCTGGTCAT
GCAGGATTTCATTCAAAGAACAATTTGAACGAGCCATTTTCTGTTAATAA
TGGTGATCTACTTGATGCTGGTAATATCACAGAGAGAAAAGTTGAAAAGG
ATGACACACCTAGGTTAAAACCACCCTACTACAATAATGCTATCCCACCT
CCTTATGTAAAGTCTAACTCTAAACTGAAGATCTGCACACGTGAAACTGA
TTTATCATCTTCACATATTGACAGTGAGGATATCATTCTATATCCTTCTG
TGCATGGAAAACCTTATGCTGCTTCTACATCAGAGAGGATCCGGTTAGGT
TTGGATAAGAAAGACAGTGGACATGAAAGACCGAGTAAAGAGGGTCATGA
AAAAGAACTGTCTACCCATGATGCTGCTGCAGAAATCCCTGTATTAACAC
AAAAATCAATGAGGCGGAGGCACTCAAAGTCGCAATCCAGTGACAATGAT
GCCAGTAATAATGACGCTGAAGTTGAGAGAAAACCGAGGAGCAGGAGACG
AGACGAAACAAGACACAGTCTGCAAATTATGTTTGATGATAAGCAGCATG
AAACTGATGAAGATGAAAGGGTAATAGATAGATTACTGATCCATTACAGC
AATAAGCCTCCCATTCCGGTGCCTGAAAAAGCGAGAAGGTCTAAAAGTCG
CCATGCTCATTGGACCAGGGAATCCCTAAGAATGAAAACGATGATGGGTC
TGATCAGTCACCGCATCCATGATCAGCTTCCCTTCCACAACCAAGAGCAG
TGTAAGTGA
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protein sequence of rna-TanjilR_04524_La_Tanjil_v1.0

>rna-TanjilR_04524_La_Tanjil_v1.0 ID=rna-TanjilR_04524_La_Tanjil_v1.0; Name=rna-TanjilR_04524_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=452bp
MRKSLIKLTKNRIDVIRRRRKATERFLKKDVAELLMNGLDANAYGKAEGI
IVDLTLSSCYDYVEQSCEFVLKHLSVLQKLREAISSLMIAAARFSDLSEL
RERYGNSIECYVNQEFAANLNLKSAALEKKVLLMQDIASEFSIKWDSKAF
ELRMPKSSAFAQDKKVEKIEGGSNLHDSWGNATPLRASQDTATAMKSPGH
AGFHSKNNLNEPFSVNNGDLLDAGNITERKVEKDDTPRLKPPYYNNAIPP
PYVKSNSKLKICTRETDLSSSHIDSEDIILYPSVHGKPYAASTSERIRLG
LDKKDSGHERPSKEGHEKELSTHDAAAEIPVLTQKSMRRRHSKSQSSDND
ASNNDAEVERKPRSRRRDETRHSLQIMFDDKQHETDEDERVIDRLLIHYS
NKPPIPVPEKARRSKSRHAHWTRESLRMKTMMGLISHRIHDQLPFHNQEQ
CK
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mRNA from alignment at Chr_LG03-CM007363.1:2154993..2158451+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_04524_La_Tanjil_v1.0 ID=rna-TanjilR_04524_La_Tanjil_v1.0; Name=rna-TanjilR_04524; organism=Lupinus angustifolius; type=mRNA; length=3459bp; location=Sequence derived from: Chr_LG03-CM007363.1:2154993..2158451+ (Lupinus angustifolius
ATGCGGTTTAACTTGTTGTAATTAGCGTTCTCTTTTTTCGTTTTacgttt ttatttatttatttatttgatttttcagCAAATCATTGATCAAGTTGACG AAGAATCGGATTGATGTGATAAGGAGACGGAGGAAAGCGACGGAGAGGTT TCTGAAGAAAGACGTCGCTGAGCTATTGATGAATGGTTTAGATGCCAATG CTTATGGAAAGGTAattgattcttttatttttgttattattttgtttggt gCAATTTAATGTTTCGGTTATGTCAATTTTATATAATCGTTTGAGATTTC TTGTTGAAAAGAGTATGTGATTTATGGTCTTGCTTTATTCTACTGCTAGT CAAAGCAATGATGAACGTGTTTAGTGcaattgattattattttagttgtt taGTGCAATTTATAGATTCGGTTATGTGAGATTCTTCACTAGAATGGATT TCTGAGATCAATGCACCTTGCACAGGTTTGAATATTCTGTTTGTTATTTA AGGTTGAAAAGGGCATGTGACTTAATCATGCTGGATTCTACTGCTAGTCG AAGGATGAAGAATGCGTAATGAATTCTGAtaatcttttgttgatttaaaa aactattttttttagtttaggATGGATCTAGAGTGTCCTTAAAAAAAGTG GAACAAGAGTGAGATGAGAACTGTTTTCCACTTAAAGTATCTAAAAATGT GTTCTGATAAACTATTGTAACTGTTAATGTTTGATTAAAAGCTACCATAG ATAACTTCAAAGTGTTCCAATAATTCCTGTATTTGTAAATTGCTACACAA TATTTTCTCAATTTAACTTTTGAATCCTTTGTTTGATATATCACGTTGAA AAGAGTATGTGAGTATTGGTCTTGCTTAATGCTATTGCTAGTCAAAGGAT GAAGAATGCATTCTGAATTGTGATaatcttttgttgattttgaaTGTTCG GTTTTCTTTAGTATAGAATGGAACAAGAATGAAATGAGAACTCCTTTTCC ACTTAGTTTTCTGTTCCGATGGTTGTGTTCTAATAATCTTTTGTAACTGT TGTTGTTCGATTAAACAGATATTCAGTTTTGTTCCAATGGGAATTTATAC ACTGCACATGAACTGATGTGATTAGATAGGTTTTATATTCTCTTTTACCT TTTAGGTGTTCGTCTACACATAATTTCTGCCAAATTCAACTGATTGCAAC TCATTTCATAATGATCCATACGCTTCTTGTTCATACTATGTATCACAGCC CTTGATAAAAAGGGACCATATAAACCTTTAAATTGTGCAAATAATTCTtg tatttgaaaatttcaacaCTGTATTTTCTCAATTTAACTTTTGTCTTGCT TGTGGGGTGGTTATACAGGCTGAAGGAATCATTGTTGATTTGACATTGTC ATCTTGTTATGATTATGTTGAGCAATCCTGTGAGTTTGTGTTGAAGCACC TCTCAGTGCTGCAGAAGCTGAGGTATGAATATAATTGATAAAGCCATAAA GGTAGTCTGCAAGGCTTCATGTGTCTATTATAATTGCTCATGTAGGAAAG TAAAGTCGTGCTATTAGGtgtaaaaaaaaagtgattatgAACATGTGCAA CAGTTGCATATTACCGGGCACCATcaacaaatatacatatttacAAATTC TCATATGCAAATTCAACAGTCATATTCTAGGACACTTCTTTTTTGGTGGT TAGATGAAAGAAGCAATCAATCAAGTTCTTAAACTATTCAAACTCTACCA GATCTTTCTCATCATGTTCCTAATTTAGTTGAGTGTCtaatttcattatc ttttttaattttcattgtcTTGTGATTTCTCTTTCTAAATCATTActcat tatttcaaaataaaccTTGGAACCATTTCTGTCTGTCTGATAATAATTAG ACACCCTTAACAAATCTCCCACATTGTTTTCCAGCCATTACTTTATTGGG ATTGGATGCCAAAACCTTAGAAGcgattttgttttttttatgcaCGCAGT GTCTAAGTATCCCTAATTCTTGTGGTTGGGtagacatttcaaacttttCC TCATGTCAAACTAGATTactaacatcattttttttaaatcagtGAATGCC CTCGGGAATGCAGGGAGGCCATATCCTCTTTGATGATTGCTGCTGCAAGA TTTTCTGATCTATCAGAATTACGTGAGAGATATGGGAATTCCATAGAATG TTATGTCAATCAAGAGGTCACTCTTCACATCTATTTTTTCCCATTAGAAT TTTACATATTTGTGACTTATCCCTTAATTGACTCACTAAATTGCTTATCA TCAGTTTGctgcaaatttgaatttgaagtcCGCTGCATTGGAGAAAAAGG TCCTCTTGATGCAGGATATTGCTTCAGAGTTTTCAATAAAGTGGGACTCC AAAGCTTTTGAGCTGAGGATGCCAAAATCCTCTGCATTTGCACAGGTGTT GTCTTCcaccttttctctttttcacctTTGATTAGTTCCATTgtcaaatt gaaaatatatgcaATGCTCCAAGAAGAGCGATAGAGGTTATTGGAAGCCC GGTAGTATGCTAAAACCACTTGAATTTTCATCACAGGATAAAAAAGTGGA AAAAATTGAAGGTGGTTCCAATCTTCATGATAGTTGGGGGAATGCCACCC CTCTAAGAGCAAGCCAAGACACTGCAACTGCTATGAAGTCTCCTGGTCAT GCAGGATTTCATTCAAAGAACAATTTGAACGAGCCATTTTCTGTTAATAA TGGTGATCTACTTGATGCTGGTAATATCACAGAGAGAAAAGTTGAAAAGG ATGACACACCTAGGTTAAAACCACCCTACTACAATAATGCTATCCCACCT CCTTATGTAAAGTCTAACTCTAAACTGAAGATCTGCACACGTGAAACTGA TTTATCATCTTCACATATTGACAGTGAGGATATCATTCTATATCCTTCTG TGCATGGAAAACCTTATGCTGCTTCTACATCAGAGAGGATCCGGTTAGGT TTGGATAAGAAAGACAGTGGACATGAAAGACCGAGTAAAGAGGGTCATGA AAAAGAACTGTCTACCCATGATGCTGCTGCAGAAATCCCTGTATTAACAC AAAAATCAATGAGGCGGAGGCACTCAAAGTCGCAATCCAGTGACAATGAT GCCAGTAATAATGACGCTGAAGTTGAGAGAAAACCGAGGAGCAGGAGACG AGACGAAACAAGACACAGTCTGCAAATTATGTTTGATGATAAGCAGCATG AAACTGATGAAGATGAAAGGGTAATAGATAGATTACTGATCCATTACAGC AATAAGCCTCCCATTCCGGTGCCTGAAAAAGCGAGAAGGTCTAAAAGTCG CCATGCTCATTGGACCAGGGAATCCCTAAGAATGAAAACGATGATGGGTC TGATCAGTCACCGCATCCATGATCAGCTTCCCTTCCACAACCAAGAGCAG TGTAAGTGA
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Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:2154993..2158451+

>rna-TanjilR_04524_La_Tanjil_v1.0 ID=rna-TanjilR_04524_La_Tanjil_v1.0; Name=rna-TanjilR_04524; organism=Lupinus angustifolius; type=CDS; length=1359bp; location=Sequence derived from: Chr_LG03-CM007363.1:2154993..2158451+ (Lupinus angustifolius
ATGCGCAAATCATTGATCAAGTTGACGAAGAATCGGATTGATGTGATAAG
GAGACGGAGGAAAGCGACGGAGAGGTTTCTGAAGAAAGACGTCGCTGAGC
TATTGATGAATGGTTTAGATGCCAATGCTTATGGAAAGGCTGAAGGAATC
ATTGTTGATTTGACATTGTCATCTTGTTATGATTATGTTGAGCAATCCTG
TGAGTTTGTGTTGAAGCACCTCTCAGTGCTGCAGAAGCTGAGGGAGGCCA
TATCCTCTTTGATGATTGCTGCTGCAAGATTTTCTGATCTATCAGAATTA
CGTGAGAGATATGGGAATTCCATAGAATGTTATGTCAATCAAGAGTTTGc
tgcaaatttgaatttgaagtcCGCTGCATTGGAGAAAAAGGTCCTCTTGA
TGCAGGATATTGCTTCAGAGTTTTCAATAAAGTGGGACTCCAAAGCTTTT
GAGCTGAGGATGCCAAAATCCTCTGCATTTGCACAGGATAAAAAAGTGGA
AAAAATTGAAGGTGGTTCCAATCTTCATGATAGTTGGGGGAATGCCACCC
CTCTAAGAGCAAGCCAAGACACTGCAACTGCTATGAAGTCTCCTGGTCAT
GCAGGATTTCATTCAAAGAACAATTTGAACGAGCCATTTTCTGTTAATAA
TGGTGATCTACTTGATGCTGGTAATATCACAGAGAGAAAAGTTGAAAAGG
ATGACACACCTAGGTTAAAACCACCCTACTACAATAATGCTATCCCACCT
CCTTATGTAAAGTCTAACTCTAAACTGAAGATCTGCACACGTGAAACTGA
TTTATCATCTTCACATATTGACAGTGAGGATATCATTCTATATCCTTCTG
TGCATGGAAAACCTTATGCTGCTTCTACATCAGAGAGGATCCGGTTAGGT
TTGGATAAGAAAGACAGTGGACATGAAAGACCGAGTAAAGAGGGTCATGA
AAAAGAACTGTCTACCCATGATGCTGCTGCAGAAATCCCTGTATTAACAC
AAAAATCAATGAGGCGGAGGCACTCAAAGTCGCAATCCAGTGACAATGAT
GCCAGTAATAATGACGCTGAAGTTGAGAGAAAACCGAGGAGCAGGAGACG
AGACGAAACAAGACACAGTCTGCAAATTATGTTTGATGATAAGCAGCATG
AAACTGATGAAGATGAAAGGGTAATAGATAGATTACTGATCCATTACAGC
AATAAGCCTCCCATTCCGGTGCCTGAAAAAGCGAGAAGGTCTAAAAGTCG
CCATGCTCATTGGACCAGGGAATCCCTAAGAATGAAAACGATGATGGGTC
TGATCAGTCACCGCATCCATGATCAGCTTCCCTTCCACAACCAAGAGCAG
TGTAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR042277IST1-like
IPR005061Ist1
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport