rna-TanjilR_04541
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: ALMT9_ARATH (Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana OX=3702 GN=ALMT9 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.849e-87 Identity = 137/267 (51.31%), Postives = 166/267 (62.17%), Query Frame = 2
Query: 866 MCISISFSLTILAGATLSKGLNRAVGTLSAGGIALGMAKLSKLVGEWEEVAIIISIFLVGLIFHSFAFLVKQGSXXXXXXXXXXX*LIGFCATYAKLYPTMKAYEYGIRVFMITYCLVTVSGYRTGDFIITATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFIGVASSLEGCL*YCFRFXXXXXXXXXXXXXXXXXXXXG*ITLLSLFSGVVNSYLNCIEYERVPSKILTYQASDDPVYSGYRSVVESTSKEDALVLYA 1666
+ + + F TI GATLSKG NRA+GTLSAGG+ALGMA+LS L G+WEE+ +SIF IGF AT+ KLYP+MKAYEYG RVF++TYC + +SG+RTG FI A RF+LIALGA VSLGVN+FI+PIWAGEDLH LV KNF+ VA+SLEGC VN YL C+EYER+PSKILTYQAS+DPVY GYRS VESTS+E++L+ +A
Sbjct: 123 LTVVVVFEFTI--GATLSKGFNRALGTLSAGGLALGMAELSTLFGDWEEIFCTLSIFC-----------------------------IGFLATFMKLYPSMKAYEYGFRVFLLTYCYILISGFRTGQFIEVAISRFLLIALGAGVSLGVNMFIYPIWAGEDLHNLVVKNFMNVATSLEGC---------------------------------------VNGYLRCLEYERIPSKILTYQASEDPVYKGYRSAVESTSQEESLMSFA 319 HSP 2 Score: 94.3597 bits (233), Expect = 2.849e-87 Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query: 1741 LSFAVWEPPHGRYKMLRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQV 1890
+SFA+WEPPHG YK YPWKNYVK+SGAL+HCAF VMA+HGCILSEIQ
Sbjct: 316 MSFAIWEPPHGPYKSFNYPWKNYVKLSGALKHCAFTVMALHGCILSEIQA 365 HSP 3 Score: 189.504 bits (480), Expect = 2.213e-49 Identity = 115/234 (49.15%), Postives = 149/234 (63.68%), Query Frame = 2
Query: 2981 AGTFLFILKCLLAFK*APPEKRHVFRNELKKVCSEGAKVLREIGNKVKKMEKLGDEDILFDVQEAVEELQRKIDKKSFLLVNSESWEIGNRPSHEVEPQDLLNNDE----ETH---FLEYKSLSEAMLDLRAVRVPKLWGENGAPEVKPAVPAAIVEENMFKKQISWQAQRSFQADAILSKAES------KTYENASSLSVATFTTLLIEFVARLPYLVDSFEELGEVAKFKDP 3643
A T + + C+L+ AP E+R VFR EL++V EGAK+LRE+G KVKKMEKLG D+LF+V A EELQ KIDKKS+LLVNSE WEIGNR + E EPQ+LL+ ++ E H +KSLSEA+L+ +P WGE E A+ F KQ+SW A+ + S KTYE+AS+LS+ATF +LLIEFVARL +VD+F+EL + A FK+P
Sbjct: 349 AFTVMALHGCILSEIQAPEERRQVFRQELQRVGVEGAKLLRELGEKVKKMEKLGPVDLLFEVHLAAEELQHKIDKKSYLLVNSECWEIGNRATKESEPQELLSLEDSDPPENHAPPIYAFKSLSEAVLE-----IPPSWGEKNHRE-------ALNHRPTFSKQVSWPARLVLPPHLETTNGASPLVETTKTYESASALSLATFASLLIEFVARLQNVVDAFKELSQKANFKEP 570 HSP 4 Score: 94.3597 bits (233), Expect = 2.653e-18 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 19 KLGSFRHSFKERKERLLSMKGGGYSQIGIVLPESDDDADVTVARRWWRRC--------SDGVVKGWNKVKHVAVSAWEMGHSDPRKVIFSAKVGFALMLITLLIFLNEPFKDVSRYFXXXXXXXXXXFEFSIG 393
K GSFRH E++ERLLS G+S ES+D + R R C S+ + ++ K VA AWEMG SDPRK++FSAK+G AL ++ LLIF EP D+SRY VWA+LTVVVVFEF+IG
Sbjct: 4 KQGSFRHGILEKRERLLS--NNGFSDFRFTDIESNDLLENENCGRRTRLCCCCSCGNLSEKISGVYDDAKDVARKAWEMGVSDPRKIVFSAKIGLALTIVALLIFYQEPNPDLSRYSVWAILTVVVVFEFTIG 134
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: ALMT5_ARATH (Aluminum-activated malate transporter 5 OS=Arabidopsis thaliana OX=3702 GN=ALMT5 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.213e-80 Identity = 126/254 (49.61%), Postives = 153/254 (60.24%), Query Frame = 2
Query: 905 GATLSKGLNRAVGTLSAGGIALGMAKLSKLVGEWEEVAIIISIFLVGLIFHSFAFLVKQGSXXXXXXXXXXX*LIGFCATYAKLYPTMKAYEYGIRVFMITYCLVTVSGYRTGDFIITATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFIGVASSLEGCL*YCFRFXXXXXXXXXXXXXXXXXXXXG*ITLLSLFSGVVNSYLNCIEYERVPSKILTYQASDDPVYSGYRSVVESTSKEDALVLYA 1666
GATL KG NRA+GT+ AGG+ALG+A+LS L GE+EEV I+I IFL G F A+Y KLY +MK YEY RVF +TYC+V VSG + DF+ TA +R +LI LGA + L VN+F+FPIWAGEDLH LVAKNF VA+SLEGC VN YL C+EYER+PSKILTYQASDDP+YSGYRS V+STS+ED+L+ +A
Sbjct: 103 GATLVKGFNRALGTMLAGGLALGVAQLSVLAGEFEEVIIVICIFLAG-----------------------------FGASYLKLYASMKPYEYAFRVFKLTYCIVLVSGNNSRDFLSTAYYRILLIGLGATICLLVNVFLFPIWAGEDLHKLVAKNFKNVANSLEGC---------------------------------------VNGYLQCVEYERIPSKILTYQASDDPLYSGYRSAVQSTSQEDSLLDFA 288 HSP 2 Score: 94.3597 bits (233), Expect = 1.213e-80 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query: 1741 LSFAVWEPPHGRYKMLRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQV 1890
L FA+WEPPHG YK +PWKNYVK+SGA+RHCAF VMAMHGCILSEIQ
Sbjct: 285 LDFAIWEPPHGPYKTFNHPWKNYVKLSGAVRHCAFTVMAMHGCILSEIQA 334 HSP 3 Score: 137.887 bits (346), Expect = 1.494e-32 Identity = 101/228 (44.30%), Postives = 132/228 (57.89%), Query Frame = 2
Query: 2981 AGTFLFILKCLLAFK*APPEKRHVFRNELKKVCSEGAKVLREIGNKVKKMEKLGDE--DILFDVQEAVEELQRKIDKKSFLLVNSESWEIGNRPSHEVEP--QDLLNNDEETHFLEYKSLSEAMLDLRAVRVPKLWGENGAPEVKPAVPAAIVEENMFKKQISWQAQRSFQADAILSKAESKTYENASSLSVATFTTLLIEFVARLPYLVDSFEELGEVAKFKDPLKQ 3652
A T + + C+L+ A PEKRHVF NEL++V +EGAKVLR G KV+KMEKL +IL DVQ A E LQ KID KS+LLVNSESW + E D D+ET + KSLS+ + D + N + + E M K + W + SF ++++ E K YE+ASSLS+ATF +LLIEFVARL +V++FEEL A FKD + Q
Sbjct: 318 AFTVMAMHGCILSEIQASPEKRHVFSNELRRVGNEGAKVLRLFGEKVEKMEKLSLSLGEILKDVQRAAEALQMKIDSKSYLLVNSESWAAIKEQAEAEEARENDQEAKDDETKVI--KSLSQ-IWDTNNNNNHQ---SNDQSQHWMST-----ESMMLKNREMWPSM-SFIDGTVVNEIECKVYESASSLSLATFASLLIEFVARLQNIVNAFEELSTKAGFKDAVDQ 533
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: ALMT4_ARATH (Aluminum-activated malate transporter 4 OS=Arabidopsis thaliana OX=3702 GN=ALMT4 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 9.504e-80 Identity = 130/254 (51.18%), Postives = 156/254 (61.42%), Query Frame = 2
Query: 905 GATLSKGLNRAVGTLSAGGIALGMAKLSKLVGEWEEVAIIISIFLVGLIFHSFAFLVKQGSXXXXXXXXXXX*LIGFCATYAKLYPTMKAYEYGIRVFMITYCLVTVSGYRTGDFIITATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFIGVASSLEGCL*YCFRFXXXXXXXXXXXXXXXXXXXXG*ITLLSLFSGVVNSYLNCIEYERVPSKILTYQASDDPVYSGYRSVVESTSKEDALVLYA 1666
GATL KG NRA+GTLSAGG+ALG+A+LS GE+EE+ IIISIF+ G F A+Y KLYP MK+YEY RVF++TYC+V VSG + DF TA +RF+LI +GA + LGVNIFI PIWAGEDLH LV KNF VA+SLEGC VN YL C+EYER+PSKILTYQASDDP+YSGYRSVV+STS+ED+L+ +A
Sbjct: 114 GATLVKGFNRAIGTLSAGGLALGIARLSVSAGEFEELIIIISIFIAG-----------------------------FSASYLKLYPAMKSYEYAFRVFLLTYCIVLVSGNNSRDFFSTAYYRFLLILVGAGICLGVNIFILPIWAGEDLHKLVVKNFKSVANSLEGC---------------------------------------VNGYLQCVEYERIPSKILTYQASDDPLYSGYRSVVQSTSQEDSLLDFA 299 HSP 2 Score: 94.3597 bits (233), Expect = 9.504e-80 Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query: 1741 LSFAVWEPPHGRYKMLRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQV 1890
L FAVWEPPHG YK +PW NYVK+SGA+RHCAFMVMAMHGCILSEIQ
Sbjct: 296 LDFAVWEPPHGPYKTFHHPWANYVKLSGAVRHCAFMVMAMHGCILSEIQA 345 HSP 3 Score: 136.732 bits (343), Expect = 4.680e-32 Identity = 91/217 (41.94%), Postives = 130/217 (59.91%), Query Frame = 2
Query: 3008 CLLAFK*APPEKRHVFRNELKKVCSEGAKVLREIGNKVKKMEKLGDEDILFDVQEAVEELQRKIDKKSFLLVNSESWEIGNRPSHEVEPQDLLN--NDEETHFLEYKSLSEAMLDLRAVRVPKLWGENGAPEVKPAVPAAIVEENMFKKQISWQAQRSFQADAILSKAESKTYENASSLSVATFTTLLIEFVARLPYLVDSFEELGEVAKFKDPLKQ 3652
C+L+ A PEKR FR EL++V +EGAKVLR G KV+KMEKL ++L DVQ A EELQ KID SFLLVNSESW + E Q + D+E+ ++ SLS+ + D + ++ + E M + + +W + SF +++++ ESK YE+ASSLS+ATF +LLIEFVARL +V+++EEL A FK+ + +
Sbjct: 338 CILSEIQAAPEKRQAFRQELQRVGNEGAKVLRLFGEKVEKMEKLSPGNVLKDVQRAAEELQMKIDSNSFLLVNSESWAAMKEKAEAEEAQQNYHEAKDDESKVIQ--SLSQ-IWDNNNNPHHQNQHAGNDSQLWIS-----TESMMLRNRENWPSV-SFIGGSMINEIESKVYESASSLSLATFASLLIEFVARLQNIVNAYEELSTKADFKEQVSE 545 HSP 4 Score: 74.3294 bits (181), Expect = 3.952e-12 Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 151 RWWRRCSDGVVKGWNKVKHVAVSAWEMGHSDPRKVIFSAKVGFALMLITLLIFLNEPFKDVSRYFXXXXXXXXXXFEFSIGIKVL 405
R +R CSDG+ W + + +EMG SD RKV FS K+G AL L + +I+L EP +D S+Y VWA+LTVVVVFE+SIG ++
Sbjct: 34 RCFRFCSDGITASWKALYDIGAKLYEMGRSDRRKVYFSVKMGMALALCSFVIYLKEPLRDASKYAVWAILTVVVVFEYSIGATLV 118
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: ALMT3_ARATH (Putative aluminum-activated malate transporter 3 OS=Arabidopsis thaliana OX=3702 GN=ALMT3 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 8.338e-78 Identity = 124/256 (48.44%), Postives = 153/256 (59.77%), Query Frame = 2
Query: 905 GATLSKGLNRAVGTLSAGGIALGMAKLSKLVGEWEEVAIIISIFLVGLIFHSFAFLVKQGSXXXXXXXXXXX*LIGFCATYAKLYPTMKAYEYGIRVFMITYCLVTVSGYRTGDFIITATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFIGVASSLEGCL*YCFRFXXXXXXXXXXXXXXXXXXXXG*ITLLSLFSGVVNSYLNCIEYERVPSKILTYQA-SDDPVYSGYRSVVESTSKEDALVLYAS 1669
GAT SKG NR +GTLSAGG+ALGM+ +S++ G W +V SIF+V F ATYAKLYPTMK YEYG RVF++TYC V VSGY+TG+F+ TA RF+LIALGA+V L VN I+PIWAGEDLH LVAKNF+ VA+SLEGC VN YL C+ Y+ +PS+IL Y+A ++DPVYSGYRS V+STS+ED L+ +AS
Sbjct: 138 GATFSKGCNRGLGTLSAGGLALGMSWISEMTGNWADVFNAASIFVVA-----------------------------FFATYAKLYPTMKPYEYGFRVFLLTYCYVIVSGYKTGEFMETAVSRFLLIALGASVGLIVNTCIYPIWAGEDLHNLVAKNFVNVATSLEGC---------------------------------------VNGYLECVAYDTIPSRILVYEAVAEDPVYSGYRSAVQSTSQEDTLMSFAS 325 HSP 2 Score: 90.1225 bits (222), Expect = 8.338e-78 Identity = 39/50 (78.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 1741 LSFAVWEPPHGRYKMLRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQV 1890
+SFA WEPPHG YK RYPW YVKV GALRHCA MVMA+HGCILSEIQ
Sbjct: 321 MSFASWEPPHGPYKSFRYPWALYVKVGGALRHCAIMVMALHGCILSEIQA 370 HSP 3 Score: 153.68 bits (387), Expect = 1.524e-37 Identity = 100/224 (44.64%), Postives = 139/224 (62.05%), Query Frame = 2
Query: 3008 CLLAFK*APPEKRHVFRNELKKVCSEGAKVLREIGNKVKKMEKLGD-EDILFDVQEAVEELQRKIDKKSFLLVNSESWEIGNRPSHE--VEPQDLLNNDEE-THFLEYKSLSEAMLDLRAVRVPKLWGE-NGAPEVKPAVPAAIVEE-NMFKKQISWQAQRSFQADAILS---KAESKTYENASSLSVATFTTLLIEFVARLPYLVDSFEELGEVAKFKDPLKQ 3652
C+L+ A ++R FRNEL++V EGAKVLR IG +KKMEKL EDIL+++ +A EELQ KIDKKS+LLVN+++WEIGNRP + Q + N D + + L +KS SEA L R PK W + A + A ++ M KQ SW ++ S ++L K YE+AS+LS+ATF +LLIEFVARL LV++++EL A FK+ + +
Sbjct: 363 CILSEIQAAEDRRREFRNELQRVGIEGAKVLRYIGESLKKMEKLNPIEDILYEIHQAAEELQSKIDKKSYLLVNAKNWEIGNRPRVRDLTDEQKISNLDSDLSRILAHKSQSEATL-----RPPKNWDDVTTAANLSSATMLPYLQSRTMIHKQPSWPSRISITPGSMLQPPLGEPGKMYESASNLSLATFASLLIEFVARLENLVNAYDELSVKANFKEAVSE 581 HSP 4 Score: 79.7221 bits (195), Expect = 7.663e-14 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 25 GSFRHSFKERKERLLSMKGGGYSQIGIVLPESDDDADVTVARRWWRRCSDGVVKGWNKVKHVAVSAWEMGHSDPRKVIFSAKVGFALMLITLLIFLNEPFKDVSRYFXXXXXXXXXXFEFSIG 393
GSFR S ++R L ++ GYS + +DD +V + SD + K+K V V+AWEMG +DPRK+IFSAK+G AL L ++LIF P ++S +++WA+LTVVV+FEFSIG
Sbjct: 27 GSFRQSMRDR----LILQSRGYSNV-------NDDDKTSVRCCSYSYFSDKITGVVKKLKDVLVTAWEMGTADPRKMIFSAKMGLALTLTSILIFFKIPGLELSGHYLWAILTVVVIFEFSIG 138
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: ALMT6_ARATH (Aluminum-activated malate transporter 6 OS=Arabidopsis thaliana OX=3702 GN=ALMT6 PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.185e-77 Identity = 121/254 (47.64%), Postives = 150/254 (59.06%), Query Frame = 2
Query: 905 GATLSKGLNRAVGTLSAGGIALGMAKLSKLVGEWEEVAIIISIFLVGLIFHSFAFLVKQGSXXXXXXXXXXX*LIGFCATYAKLYPTMKAYEYGIRVFMITYCLVTVSGYRTGDFIITATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFIGVASSLEGCL*YCFRFXXXXXXXXXXXXXXXXXXXXG*ITLLSLFSGVVNSYLNCIEYERVPSKILTYQASDDPVYSGYRSVVESTSKEDALVLYA 1666
GATL KG NRA+GT+SAGG+ALG+A+LS L ++E+ II IFL G F A+Y+KL+P MK YEY RVF++T+C+V VSG TGDF TA +RF+ I +GA L VNIFIFPIWAGEDLH LVA NF VA+SLEGC VN YL C+EYERVPSKILTYQ SDDP+YSGYRS ++ST++E++L+ +A
Sbjct: 86 GATLVKGFNRAIGTVSAGGLALGIARLSVLSRDFEQTIIITCIFLAG-----------------------------FIASYSKLHPAMKPYEYAFRVFLLTFCIVLVSGNNTGDFFSTAYYRFLFIVVGATTCLVVNIFIFPIWAGEDLHKLVANNFKSVANSLEGC---------------------------------------VNGYLQCVEYERVPSKILTYQTSDDPLYSGYRSAIQSTNQEESLLDFA 271 HSP 2 Score: 91.6633 bits (226), Expect = 2.185e-77 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query: 1741 LSFAVWEPPHGRYKMLRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQV 1890
L FA+WEPPHG Y+ +PWKNYVK+SGA+RHCAF VMA+HGCILSEIQ
Sbjct: 268 LDFAIWEPPHGPYRTFNHPWKNYVKLSGAVRHCAFTVMAIHGCILSEIQA 317 HSP 3 Score: 143.665 bits (361), Expect = 1.910e-34 Identity = 98/231 (42.42%), Postives = 136/231 (58.87%), Query Frame = 2
Query: 2981 AGTFLFILKCLLAFK*APPEKRHVFRNELKKVCSEGAKVLREIGNKVKKMEKLGDEDILFDVQEAVEELQRKIDKKSFLLVNSESWEIGNRPSHEVEPQDLLNNDEETHFLEYKSLSEAMLDLRAVRVPKLWGENGAPEVKPAVPAAIVEEN---------MFKKQISWQAQRSFQADAILSKAESKTYENASSLSVATFTTLLIEFVARLPYLVDSFEELGEVAKFKDPL 3646
A T + I C+L+ A PEKR FR+EL++V +EGAKVLR IG KV+KME LG +IL DVQ A EELQ KID KS+LLVNSESW + E ++ + + KSLS+ +W N + + PA+ +E+ M + + +W + SF +++++ K YE+ASSLS+ATF +LLIEFVARL LV++FEEL A F+DP+
Sbjct: 301 AFTVMAIHGCILSEIQAAPEKRQAFRHELQRVGNEGAKVLRLIGEKVEKMENLGPGEILNDVQRAAEELQMKIDSKSYLLVNSESWAATKEKAEAEEYEEEAHETKVI-----KSLSQ------------IWDTNSSSNNQN--PASGNDESQIWESTESMMLRNRETWPSV-SFIGGSVVNETVYKVYESASSLSLATFASLLIEFVARLENLVNAFEELSTKADFRDPV 511
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: ALMTC_ARATH (Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana OX=3702 GN=ALMT12 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.537e-28 Identity = 77/261 (29.50%), Postives = 118/261 (45.21%), Query Frame = 2
Query: 890 LTILAGATLSKGLNRAVGTLSAGGIALGMAKLSKLVGEWEEVAIIISIFLVGLIFHSFAFLVKQGSXXXXXXXXXXX*LIGFCATYAKLYPTMKA-YEYGIRVFMITYCLVTVSGYRTGDFIITATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFIGVASSLEGCL*YCFRFXXXXXXXXXXXXXXXXXXXXG*ITLLSLFSGVVNSYLNCIEYERVPSKILTYQASDDPVYSGYRSVVESTSKEDALVLYAS 1669
L AGATL KGLNR +GTL AG +A + ++ G+ ++ +IF+ +F +IG ATY + P +K Y+YG+ +F++T+ L+TVS YR I A RF IA+G + L +++ +FPIW+GEDLH G++ S+E C V+ Y E E+ SK D +Y GY++V++S S ++ L LYA+
Sbjct: 89 LEFSAGATLCKGLNRGLGTLIAGSLAFFIEFVANDSGK-----VLRAIFIGTAVF-----------------------IIGAAATYIRFIPYIKKNYDYGVVIFLLTFNLITVSSYRVDSVINIAHDRFYTIAVGCGICLFMSLLVFPIWSGEDLHKTTVGKLQGLSRSIEAC---------------------------------------VDEYFEEKEKEKTDSK--------DRIYEGYQAVLDSKSTDETLALYAN 274 HSP 2 Score: 47.7506 bits (112), Expect = 9.537e-28 Identity = 21/48 (43.75%), Postives = 30/48 (62.50%), Query Frame = 1
Query: 1747 FAVWEPPHGRYKMLRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQV 1890
+A WEP H + R+P + YVKV LR + V+A+HGC+ +EIQ
Sbjct: 272 YANWEPRH-TLRCHRFPCQQYVKVGAVLRQFGYTVVALHGCLQTEIQT 318
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: ALMTD_ARATH (Aluminum-activated malate transporter 13 OS=Arabidopsis thaliana OX=3702 GN=ALMT13 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 9.940e-26 Identity = 76/263 (28.90%), Postives = 111/263 (42.21%), Query Frame = 2
Query: 890 LTILAGATLSKGLNRAVGTLSAGGIALGMAKLSKLVGEWEEVAIIISIFLVGLIFHSFAFLVKQGSXXXXXXXXXXX*LIGFCATYAKLYPTMKA-YEYGIRVFMITYCLVTVSGYRTGDFIITATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFIGVASSLEGCL*YCFRFXXXXXXXXXXXXXXXXXXXXG*ITLLSLFSGVVNSYLNCIEYERVPSKILTYQASDDP--VYSGYRSVVESTSKEDALVLYAS 1669
L AGATL KGLNR +GTL AG +A + EW VAI L G+ + F IG TY + P +K Y+YG+ VF++T+ L+TVS YR I A R I +G + L +++ FPIW+G+DLH G++ +E C V+ Y E++ + SDD +Y+GY +V++S S ++AL +YA
Sbjct: 92 LEFSAGATLRKGLNRGLGTLIAGSLAFFI--------EW--VAIHSGKILGGIFIGTSVFT------------------IGSMITYMRFIPYIKKNYDYGMLVFLLTFNLITVSSYRVDTVIKIAHERLYTIGMGIGICLFMSLLFFPIWSGDDLHKSTITKLQGLSRCIEAC---------------------------------------VSEYFE----EKLKDNETSDSESDDEDLIYNGYNTVLDSKSADEALAMYAK 283 HSP 2 Score: 48.521 bits (114), Expect = 9.940e-26 Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 1747 FAVWEPPHGRYKMLRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQV 1890
+A WEP H R + ++P + Y+KV LR + V+A+HGC+ +EIQ
Sbjct: 281 YAKWEPRHTR-RCNKFPSQQYIKVGSVLRKFGYTVVALHGCLQTEIQT 327
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: RPOA_TOBAC (DNA-directed RNA polymerase subunit alpha OS=Nicotiana tabacum OX=4097 GN=rpoA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.803e-23 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = -1
Query: 488 HSIHPYMNGNEKQ*IIFLEMWTNGSLTRTETIFEAARNFID*FIPFL 628
HSIH Y NGNEKQ I+FLE+WTNGSLT E + EA+RN ID FIPFL
Sbjct: 184 HSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL 230 HSP 2 Score: 41.9726 bits (97), Expect = 1.803e-23 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = -2
Query: 697 QHVANLTEPINFCIGLQISIDP*YSIKT 780
QH+A+LTEPI+FCIGLQI + Y IKT
Sbjct: 134 QHIASLTEPIDFCIGLQIERNRGYLIKT 161 HSP 3 Score: 38.5058 bits (88), Expect = 1.803e-23 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -3
Query: 633 FQDGSYPIDVVFTPVRNA 686
FQDGSYPID VF PVRNA
Sbjct: 165 FQDGSYPIDAVFMPVRNA 182
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: RPOA_NICSY (DNA-directed RNA polymerase subunit alpha OS=Nicotiana sylvestris OX=4096 GN=rpoA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.803e-23 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = -1
Query: 488 HSIHPYMNGNEKQ*IIFLEMWTNGSLTRTETIFEAARNFID*FIPFL 628
HSIH Y NGNEKQ I+FLE+WTNGSLT E + EA+RN ID FIPFL
Sbjct: 184 HSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL 230 HSP 2 Score: 41.9726 bits (97), Expect = 1.803e-23 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = -2
Query: 697 QHVANLTEPINFCIGLQISIDP*YSIKT 780
QH+A+LTEPI+FCIGLQI + Y IKT
Sbjct: 134 QHIASLTEPIDFCIGLQIERNRGYLIKT 161 HSP 3 Score: 38.5058 bits (88), Expect = 1.803e-23 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -3
Query: 633 FQDGSYPIDVVFTPVRNA 686
FQDGSYPID VF PVRNA
Sbjct: 165 FQDGSYPIDAVFMPVRNA 182
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Match: RPOA_ATRBE (DNA-directed RNA polymerase subunit alpha OS=Atropa belladonna OX=33113 GN=rpoA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.956e-23 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = -1
Query: 488 HSIHPYMNGNEKQ*IIFLEMWTNGSLTRTETIFEAARNFID*FIPFL 628
HSIH Y NGNEKQ I+FLE+WTNGSLT E + EA+RN ID FIPFL
Sbjct: 184 HSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL 230 HSP 2 Score: 41.9726 bits (97), Expect = 1.956e-23 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = -2
Query: 697 QHVANLTEPINFCIGLQISIDP*YSIKT 780
QH+A+LTEPI+FCIGLQI + Y IKT
Sbjct: 134 QHIASLTEPIDFCIGLQIERNRGYLIKT 161 HSP 3 Score: 38.5058 bits (88), Expect = 1.956e-23 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -3
Query: 633 FQDGSYPIDVVFTPVRNA 686
FQDGSYPID VF PVRNA
Sbjct: 165 FQDGSYPIDAVFMPVRNA 182 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04541 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_04541_La_Tanjil_v1.0 ID=rna-TanjilR_04541_La_Tanjil_v1.0; Name=rna-TanjilR_04541; organism=Lupinus angustifolius; type=mRNA; length=3682bpback to top protein sequence of rna-TanjilR_04541_La_Tanjil_v1.0 >rna-TanjilR_04541_La_Tanjil_v1.0 ID=rna-TanjilR_04541_La_Tanjil_v1.0; Name=rna-TanjilR_04541_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=578bpback to top mRNA from alignment at Chr_LG03-CM007363.1:2326167..2329848- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_04541_La_Tanjil_v1.0 ID=rna-TanjilR_04541_La_Tanjil_v1.0; Name=rna-TanjilR_04541; organism=Lupinus angustifolius; type=mRNA; length=3682bp; location=Sequence derived from: Chr_LG03-CM007363.1:2326167..2329848- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:2326167..2329848- >rna-TanjilR_04541_La_Tanjil_v1.0 ID=rna-TanjilR_04541_La_Tanjil_v1.0; Name=rna-TanjilR_04541; organism=Lupinus angustifolius; type=CDS; length=1737bp; location=Sequence derived from: Chr_LG03-CM007363.1:2326167..2329848- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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