rna-TanjilR_04577

Transcript Overview
Namerna-TanjilR_04577
Unique Namerna-TanjilR_04577_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length2565
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG03-CM007363.1supercontigChr_LG03-CM007363.1:2645514..2648078 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL089Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR535Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0922Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0931Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0934Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR0917Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0920Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0986Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0994Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0784Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0788Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0789Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0796Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR0951Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0611Pisum sativum Cameor genome v1aPisum sativum
anpvR0848Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0852Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0866Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0877Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0725Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0730Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0732Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0825Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0879Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0687Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0713Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0718Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0783Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0793Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0682Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0685Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0726Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0736Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0691Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0695Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0699Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0796Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0880Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0881Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0726Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0728Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0734Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0764Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0781Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0787Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0836Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0763Cicer arietinum
ancarR0773Cicer arietinum
anvumR0797Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0804Vigna umbellata FF25 genome v1.0Vigna umbellata
anccaR0753Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0818Vigna umbellata FF25 genome v1.0Vigna umbellata
anccaR0769Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0773Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0776Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0844Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0794Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0820Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR0805Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0815Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0812Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0823Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0820Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0830Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0846Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0857Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0693Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0697Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0888Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0892Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0907Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0918Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun03g004000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va01G000520.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_23089.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014659324.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg27058.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr03.973Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_023794Cajanus cajan Asha genome v1.0Cajanus cajan
Vigst.01G003800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.01G005500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun03g004000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_01G00045.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.002G329500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
XM_058876441.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Hedin2.R1.6g198680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004503224.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_10352Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Tiffany.R1.6g153600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
PvulFLAVERTChr02.1001964Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_06123Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_21965Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_04577gene-TanjilG_04577_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04577rna-TanjilR_04577_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_04577_La_Tanjil_v1.0rna-TanjilR_04577_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647886..2648078rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647886..2648078Lupinus angustifoliusCDS
rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647306..2647485rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647306..2647485Lupinus angustifoliusCDS
rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2646706..2646785rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2646706..2646785Lupinus angustifoliusCDS
rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2645514..2646041rna-TanjilR_04577_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2645514..2646041Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647886..2648078rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647886..2648078Lupinus angustifoliusexon
rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647306..2647485rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2647306..2647485Lupinus angustifoliusexon
rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2646706..2646785rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2646706..2646785Lupinus angustifoliusexon
rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2645514..2646041rna-TanjilR_04577_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:2645514..2646041Lupinus angustifoliusexon


Homology
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.705e-29
Identity = 68/100 (68.00%), Postives = 80/100 (80.00%), Query Frame = 2 
Query:  575 FEYELIATMADHSRRDQFNFV-----PPVVVSSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMES 859
            F   ++   A+ ++R+          PPV+VSSRWNPTP+QLR LEELYR+GTRTPSA+ IQ ITAQLRR+GKIEGKNVFYWFQNHKARERQKRRRQME+
Sbjct:   43 FNMAVVTMTAEQNKRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMET 142
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX3_ARATH (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.863e-20
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 2 
Query:  647 VVSSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQM 853
            V S+RW PTPEQL  LEE+YR G RTP+A QIQ ITA L  +G+IEGKNVFYWFQNHKAR+RQK R+++
Sbjct:    4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQKLRKKL 72
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX4_ARATH (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.017e-19
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 2 
Query:  653 SSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRR 847
             +RWNPT EQ+  LE LY+ G RTP+A+QI+HIT QL ++GKIEGKNVFYWFQNHKARERQK++R
Sbjct:   88 GTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKR 152
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX2_ORYSI (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.157e-19
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 2 
Query:  653 SSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQM 853
            ++RW PTPEQL  LEE+YR G RTP+A QIQ ITA L  +G+IEGKNVFYWFQNHKAR+RQK RR++
Sbjct:   25 TTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQKLRRRL 91
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX2_ORYSJ (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.610e-19
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 2 
Query:  653 SSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQM 853
            ++RW PTPEQL  LEE+YR G RTP+A QIQ ITA L  +G+IEGKNVFYWFQNHKAR+RQK RR++
Sbjct:   25 TTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQKLRRRL 91
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX2_ARATH (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.394e-19
Identity = 45/66 (68.18%), Postives = 56/66 (84.85%), Query Frame = 2 
Query:  653 SSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ 850
            SSRWNPT +Q+  LE LY+ G RTPSA+QIQ IT +LR +G IEGKNVFYWFQNHKAR+RQK++++
Sbjct:   12 SSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQE 77
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX6_ARATH (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.309e-18
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 2 
Query:  587 LIATMADHSRRDQFNFVPPVVVSSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKA 823
            + A+  +H   ++ N +P    + RWNPTPEQ+  LEELYR GTRTP+ EQIQ I ++LR++G+IEGKNVFYWFQNHKA
Sbjct:   38 ITASSGEHDIDERKNNIP-AAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WUS_SOLLC (Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.094e-18
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 2 
Query:  653 SSRWNPTPEQX-XXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRR 844
            SSRW PT +Q+    +  Y  G R+P+AEQIQ I+A+LR++GKIEGKNVFYWFQNHKARERQK+R
Sbjct:   24 SSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKKR 88
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX4_ORYSJ (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.471e-18
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 2 
Query:  641 PVVVSSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRR 847
            P   ++RWNP+ EQ++ LE LYR G RTP++ QI+ IT +L ++G+IEGKNVFYWFQNHKARERQK++R
Sbjct:   86 PAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKR 154
[Close]
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Match: WOX4_ORYSI (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.471e-18
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 2 
Query:  641 PVVVSSRWNPTPEQXXXXXXXXXXGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRR 847
            P   ++RWNP+ EQ++ LE LYR G RTP++ QI+ IT +L ++G+IEGKNVFYWFQNHKARERQK++R
Sbjct:   86 PAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKR 154
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_04577 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
WOX1_ARATH3.705e-2968.00WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana... [more]
WOX3_ARATH6.863e-2069.57WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana... [more]
WOX4_ARATH1.017e-1970.77WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana... [more]
WOX2_ORYSI4.157e-1970.15Putative WUSCHEL-related homeobox 2 OS=Oryza sativ... [more]
WOX2_ORYSJ4.610e-1970.15Putative WUSCHEL-related homeobox 2 OS=Oryza sativ... [more]
WOX2_ARATH5.394e-1968.18WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana... [more]
WOX6_ARATH3.309e-1858.23WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana... [more]
WUS_SOLLC8.094e-1866.15Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN... [more]
WOX4_ORYSJ8.471e-1862.32WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. ... [more]
WOX4_ORYSI8.471e-1862.32WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. ... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 86..121
e-value: 8.0E-9
score: 35.2
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 87..121
e-value: 0.00404426
score: 32.9857
NoneNo IPR availableGENE3D1.10.10.60coord: 85..142
e-value: 4.5E-5
score: 25.1
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 86..139

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_04577_La_Tanjil_v1.0 ID=rna-TanjilR_04577_La_Tanjil_v1.0; Name=rna-TanjilR_04577; organism=Lupinus angustifolius; type=mRNA; length=2565bp
ATGTGGATGATGGGTTATGATGAAGATGGTGAGTTCAACATGGTGGATCC
TTCATTCCATGAAAGGAAACTCAGGACTCTAATGCCAAGGCCAATGACTA
ATTATCCTAATAACACTTCAACAACAGCAACAATCACTCCTTGCTTAAAT
CTTATTCATGGCAATGACTTATTTTCACAATATCACCATCTTGGTATGTT
GTTTTTACACTTTTTTCCTCTCTTTCTTTTACTGTCTAGTTGGATATGTT
GTTTTCATCTGTTTGTAATTTCTCTTTTAGAGATGGAAAAATGATCATCT
CATACCCCTTTTCTCCAACACCATCTTTCATGCTTACTTTATAACCATTA
TCATTGATTAACATATATCTACTGTTGTTTACAAAGCAAAATTCACTTTG
GTCAAAGATTATAAAATTGGTGCATAAAAAAGTGTGATGAAAAATAATGT
GAGAATATCATTTTTGGTTATGTATATAAGTTATAACACTTGGTGTTAGA
CCTTATGTTTGTTGTTTATTATTTCTGAGAAAATAATCCTTATTTTTTTT
CCAAAATTTTAATCTTTATAAGATTTTGAATATGAACTTATAGCAACAAT
GGCAGATCATAGCAGGAGAGATCAGTTCAATTTTGTTCCACCAGTTGTGG
TGAGTTCTAGGTGGAATCCAACTCCAGAACAGCTAAGAGAACTTGAAGAA
TTGTATAGAAGAGGAACAAGAACACCATCTGCAGAACAAATTCAACACAT
CACTGCACAGCTTAGAAGGTTTGGTAAGATTGAAGGGAAGAATGTTTTCT
ATTGGTTTCAAAATCACAAAGCCAGAGAAAGGCAGAAGCGCCGCCGTCAA
ATGGAATCTGCTGCTGCTGATCATGGTGATCATCACCACCATGATTCTGA
CACTCCACAGAAAAAGGAATTAAGTAACACCCCACATACCCTTCTTTACT
TCTTAGTTCATAATATATTTTTTATGAAAAATGACATTTTCACTTATTTT
TTATATACCTTATAAATTTATTTTATAACTACTGATCACATTTTTGTTTT
GGAAATATCTACTGGTAAATAATTAATGATTGTAAGATAGGTGCAAAAAA
TGGTGTGACTAAATTGAATCTGTGAATATCATTACTCTATTTTGATAACA
AAGATAGAATAAACTATGAGTATTTTGAATCTTCTCTGATACTTAGGGTT
TTAATGTATGACTTATATTCCTTTGAGTTTTGTTTGTTAGAGATCTGAAA
AGTTGTATTTCTGAATTTTTTTCTCTGTTTAATCTGTCTACAGCTGCAAG
TAGAACAGTGTTTGAAGTTGAACAGACCAAGAACTGGGTACCCTCTACAC
ATTGCACTAGTACTCTTGGAGAGGTGAGTCTAATATATCATATCTTGCTG
TGCCTTTATTCTTGGAATTCATTCATAGACTAAACTGAACTAAACCCTTT
TATTTTTCAACTTATGATTCACTTAATTGATCAAAAATTCATAAGCATTC
ATTAAGAGGGTAATTATTTGCATATGATTAGAGTTAGAGGTATGCACTGT
AGCTGCTATATGAAAAGGACTCTAAGAAAAGCTTTGTTTGTTGGGAAATG
AAAAGGATCTAAAAGCTGCATTCCTTCCTTTCTGTCGGGTCTGTTGTTAT
GAAACTTAGCTGGGCTATTGGAGATTGTGCTTGTTCATTGATTTAGGTAT
CAAGTAGTTTGTAGGGCACCCCATAATATTCTATGCAATTGAGCACCCTT
TATAATGGAAAAGACCAACTTCACCCTACTATAATTTCACTTCACTATAA
GAGCGTGAGAGTTTTTATTTGGAAAAGAAATCTTCTTTATCCACTATTTT
ATGTTTCTTATTCTTTAACTAGTATCTTTAATATAAAAAAATTATTTTTT
TTCTTCCTCTTTATATACACGCACTTTAAATTAACAAAGATGTATATTGT
ACTTTGTTGTGCATAAAATATTTTGTTTTTGCTATATAGCATGTTAGAGT
TTTCATGAGTTTGCATGCCTGCAATTAAAATCTACAGGAATCTGTCTCAA
TACAAATGGCAGAAAAAGCAGAAAATGCAGTGTGTAAAACATATGGATGG
CTCCAATTCAATGAGAGGGAATTACAACAAAGAAGAAACTTTATGGAAAA
GAATGACACATGTCATGTGATGCAGTTTTCTTGTCCTTCTCCTGCACCTG
CCACCAACCTCATAAACACCCCTCCTTATTGTAATAATAATAATAATGCA
TCAAACACAACAGTAACAACAAGAACAATGGACCCTACAAATCACATTAA
GACACATAATGATCTTAGCTTCTTTATTTCACCTCAGAGAGAAAATGGTG
TTATCCACTTAAGTAGTTATAGCAACAACAGTATTGAATATGATGATCAT
AACTGTGTGGAATCTAATCAAACACTTCAACTTTTCCCTCTAAGGAATGG
TGATGGAAGCTGCAGCCATAACATTAATGATAAAGTGACTGAGATATCTG
CCTCAGCAATGAATGCTAACTTGGCCCCTAGCCAGTTTTTTGAGTTCCTT
CCATTGAAAAATTAA
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protein sequence of rna-TanjilR_04577_La_Tanjil_v1.0

>rna-TanjilR_04577_La_Tanjil_v1.0 ID=rna-TanjilR_04577_La_Tanjil_v1.0; Name=rna-TanjilR_04577_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=326bp
MWMMGYDEDGEFNMVDPSFHERKLRTLMPRPMTNYPNNTSTTATITPCLN
LIHGNDLFSQYHHLATMADHSRRDQFNFVPPVVVSSRWNPTPEQLRELEE
LYRRGTRTPSAEQIQHITAQLRRFAASRTVFEVEQTKNWVPSTHCTSTLG
EESVSIQMAEKAENAVCKTYGWLQFNERELQQRRNFMEKNDTCHVMQFSC
PSPAPATNLINTPPYCNNNNNASNTTVTTRTMDPTNHIKTHNDLSFFISP
QRENGVIHLSSYSNNSIEYDDHNCVESNQTLQLFPLRNGDGSCSHNINDK
VTEISASAMNANLAPSQFFEFLPLKN
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mRNA from alignment at Chr_LG03-CM007363.1:2645514..2648078-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_04577_La_Tanjil_v1.0 ID=rna-TanjilR_04577_La_Tanjil_v1.0; Name=rna-TanjilR_04577; organism=Lupinus angustifolius; type=mRNA; length=2565bp; location=Sequence derived from: Chr_LG03-CM007363.1:2645514..2648078- (Lupinus angustifolius
ATGTGGATGATGGGTTATGATGAAGATGGTGAGTTCAACATGGTGGATCC
TTCATTCCATGAAAGGAAACTCAGGACTCTAATGCCAAGGCCAATGACTA
ATTATCCTAATAACACTTCAACAACAGCAACAATCACTCCTTGCTTAAAT
CTTATTCATGGCAATGACTTATTTTCACAATATCACCATCTTGGTATGTT
GTTTTTACACTTTTTTCCTCTCTTTCTTTTACTGTCTAGTTGGATATGTT
GTTTTCATCTGTTTGTAATTTCTCTTTTAGAGATGGAAAAATGATCATCT
CATACCCCTTTTCTCCAACACCATCTTTCATGCTTACTTTATAACCATTA
TCATTGATTAACATATATCTACTGTTGTTTACAAAGCAAAATTCACTTTG
GTCAAAGATTATAAAATTGGTGCATAAAAAAGTGTGATGAAAAATAATGT
GAGAATATCATTTTTGGTTATGTATATAAGTTATAACACTTGGTGTTAGA
CCTTATGTTTGTTGTTTATTATTTCTGAGAAAATAATCCTTATTTTTTTT
CCAAAATTTTAATCTTTATAAGATTTTGAATATGAACTTATAGCAACAAT
GGCAGATCATAGCAGGAGAGATCAGTTCAATTTTGTTCCACCAGTTGTGG
TGAGTTCTAGGTGGAATCCAACTCCAGAACAGCTAAGAGAACTTGAAGAA
TTGTATAGAAGAGGAACAAGAACACCATCTGCAGAACAAATTCAACACAT
CACTGCACAGCTTAGAAGGTTTGGTAAGATTGAAGGGAAGAATGTTTTCT
ATTGGTTTCAAAATCACAAAGCCAGAGAAAGGCAGAAGCGCCGCCGTCAA
ATGGAATCTGCTGCTGCTGATCATGGTGATCATCACCACCATGATTCTGA
CACTCCACAGAAAAAGGAATTAAGTAACACCCCACATACCCTTCTTTACT
TCTTAGTTCATAATATATTTTTTATGAAAAATGACATTTTCACTTATTTT
TTATATACCTTATAAATTTATTTTATAACTACTGATCACATTTTTGTTTT
GGAAATATCTACTGGTAAATAATTAATGATTGTAAGATAGGTGCAAAAAA
TGGTGTGACTAAATTGAATCTGTGAATATCATTACTCTATTTTGATAACA
AAGATAGAATAAACTATGAGTATTTTGAATCTTCTCTGATACTTAGGGTT
TTAATGTATGACTTATATTCCTTTGAGTTTTGTTTGTTAGAGATCTGAAA
AGTTGTATTTCTGAATTTTTTTCTCTGTTTAATCTGTCTACAGCTGCAAG
TAGAACAGTGTTTGAAGTTGAACAGACCAAGAACTGGGTACCCTCTACAC
ATTGCACTAGTACTCTTGGAGAGGTGAGTCTAATATATCATATCTTGCTG
TGCCTTTATTCTTGGAATTCATTCATAGACTAAACTGAACTAAACCCTTT
TATTTTTCAACTTATGATTCACTTAATTGATCAAAAATTCATAAGCATTC
ATTAAGAGGGTAATTATTTGCATATGATTAGAGTTAGAGGTATGCACTGT
AGCTGCTATATGAAAAGGACTCTAAGAAAAGCTTTGTTTGTTGGGAAATG
AAAAGGATCTAAAAGCTGCATTCCTTCCTTTCTGTCGGGTCTGTTGTTAT
GAAACTTAGCTGGGCTATTGGAGATTGTGCTTGTTCATTGATTTAGGTAT
CAAGTAGTTTGTAGGGCACCCCATAATATTCTATGCAATTGAGCACCCTT
TATAATGGAAAAGACCAACTTCACCCTACTATAATTTCACTTCACTATAA
GAGCGTGAGAGTTTTTATTTGGAAAAGAAATCTTCTTTATCCACTATTTT
ATGTTTCTTATTCTTTAACTAGTATCTTTAATATAAAAAAATTATTTTTT
TTCTTCCTCTTTATATACACGCACTTTAAATTAACAAAGATGTATATTGT
ACTTTGTTGTGCATAAAATATTTTGTTTTTGCTATATAGCATGTTAGAGT
TTTCATGAGTTTGCATGCCTGCAATTAAAATCTACAGGAATCTGTCTCAA
TACAAATGGCAGAAAAAGCAGAAAATGCAGTGTGTAAAACATATGGATGG
CTCCAATTCAATGAGAGGGAATTACAACAAAGAAGAAACTTTATGGAAAA
GAATGACACATGTCATGTGATGCAGTTTTCTTGTCCTTCTCCTGCACCTG
CCACCAACCTCATAAACACCCCTCCTTATTGTAATAATAATAATAATGCA
TCAAACACAACAGTAACAACAAGAACAATGGACCCTACAAATCACATTAA
GACACATAATGATCTTAGCTTCTTTATTTCACCTCAGAGAGAAAATGGTG
TTATCCACTTAAGTAGTTATAGCAACAACAGTATTGAATATGATGATCAT
AACTGTGTGGAATCTAATCAAACACTTCAACTTTTCCCTCTAAGGAATGG
TGATGGAAGCTGCAGCCATAACATTAATGATAAAGTGACTGAGATATCTG
CCTCAGCAATGAATGCTAACTTGGCCCCTAGCCAGTTTTTTGAGTTCCTT
CCATTGAAAAATTAA
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Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:2645514..2648078-

>rna-TanjilR_04577_La_Tanjil_v1.0 ID=rna-TanjilR_04577_La_Tanjil_v1.0; Name=rna-TanjilR_04577; organism=Lupinus angustifolius; type=CDS; length=981bp; location=Sequence derived from: Chr_LG03-CM007363.1:2645514..2648078- (Lupinus angustifolius
ATGTGGATGATGGGTTATGATGAAGATGGTGAGTTCAACATGGTGGATCC
TTCATTCCATGAAAGGAAACTCAGGACTCTAATGCCAAGGCCAATGACTA
ATTATCCTAATAACACTTCAACAACAGCAACAATCACTCCTTGCTTAAAT
CTTATTCATGGCAATGACTTATTTTCACAATATCACCATCTTGCAACAAT
GGCAGATCATAGCAGGAGAGATCAGTTCAATTTTGTTCCACCAGTTGTGG
TGAGTTCTAGGTGGAATCCAACTCCAGAACAGCTAAGAGAACTTGAAGAA
TTGTATAGAAGAGGAACAAGAACACCATCTGCAGAACAAATTCAACACAT
CACTGCACAGCTTAGAAGGTTTGCTGCAAGTAGAACAGTGTTTGAAGTTG
AACAGACCAAGAACTGGGTACCCTCTACACATTGCACTAGTACTCTTGGA
GAGGAATCTGTCTCAATACAAATGGCAGAAAAAGCAGAAAATGCAGTGTG
TAAAACATATGGATGGCTCCAATTCAATGAGAGGGAATTACAACAAAGAA
GAAACTTTATGGAAAAGAATGACACATGTCATGTGATGCAGTTTTCTTGT
CCTTCTCCTGCACCTGCCACCAACCTCATAAACACCCCTCCTTATTGTAA
TAATAATAATAATGCATCAAACACAACAGTAACAACAAGAACAATGGACC
CTACAAATCACATTAAGACACATAATGATCTTAGCTTCTTTATTTCACCT
CAGAGAGAAAATGGTGTTATCCACTTAAGTAGTTATAGCAACAACAGTAT
TGAATATGATGATCATAACTGTGTGGAATCTAATCAAACACTTCAACTTT
TCCCTCTAAGGAATGGTGATGGAAGCTGCAGCCATAACATTAATGATAAA
GTGACTGAGATATCTGCCTCAGCAATGAATGCTAACTTGGCCCCTAGCCA
GTTTTTTGAGTTCCTTCCATTGAAAAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001356HD
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding