rna-TanjilR_22797
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BEH2_ARATH (BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana OX=3702 GN=BEH2 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.259e-29 Identity = 109/194 (56.19%), Postives = 132/194 (68.04%), Query Frame = 3 Query: 456 NPSSFLLLPFIRNM------NLPPLRISNXXXXXXXXXXXXXXXXXKRKANFESFVIPNASTLNPFIHPLFXXXXXXXXXXXXXXXVGTFTIPEHDESDASTI-DSGRWVSFHNSPAPPSPTFNLMNPAIMHHQQHMIIPKDSSADMQWGAVGERGIGGSDFDFENGSVKAWEGERIHEVGMDELDLTLGFGKA 1016 NPSS+LLLPF+ N+ NLPPLRISNSAPVTPPLSSPTSR S KRK E +PN +L+ HPLFA SAPSSP+RR H+ TIPE DES+ +I DSGRW++F ++ AP SPTFNL+ Q M I S WG G G G++F+FENG+VK WEGE IHEVG+++L+LTLG KA Sbjct: 138 NPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPTSRGS-KRKLTSEQ--LPNGGSLHVLRHPLFAISAPSSPTRRAGHQTPP-TIPECDESEEDSIEDSGRWINFQST-APTSPTFNLV------QQTSMAIDMKRS---DWGMSGMNG-RGAEFEFENGTVKPWEGEMIHEVGVEDLELTLGGTKA 316 HSP 2 Score: 93.5893 bits (231), Expect = 2.024e-20 Identity = 61/67 (91.04%), Postives = 65/67 (97.01%), Query Frame = 1 Query: 25 RLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 R PTWKERENNK+RERRRRAI AKIYSGLR+QGN+KLPKHCDNNEVLKALCLEAGWIVE+DGTTYRK Sbjct: 16 RTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRK 82
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BZR1_ORYSJ (Protein BZR1 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BZR1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.247e-28 Identity = 93/188 (49.47%), Postives = 117/188 (62.23%), Query Frame = 3 Query: 456 NPSSFLLLPFIRNM-NLPPLRISNXXXXXXXXXXXXXXXXXK-RKANFESFVIPNASTLNPFIHPLFXXXXXXXXXXXXXXXVGTFTIPEHDESDASTIDSGRWVSFH-NSPAPPSPTFNLMNPAIMHHQQHMIIPKDSSADMQWGAVGERGIGGSDFDFENGSVKAWEGERIHEVGMDELDLTLGFG 1010 NPS+ LLPF+R + NLPPLR+S+SAPVTPPLSSPT+ K RK +++ ++PF HP FA SAP+SP+R TIPE DESD ST+DSGRW+SF + AP SPT+NL+NP I G G GG++F+F+ G V WEGERIHEV +EL+LTLG G Sbjct: 132 NPSASCLLPFLRGLPNLPPLRVSSSAPVTPPLSSPTASRPPKIRKPDWD---------VDPFRHPFFAVSAPASPTRGRRLE-HPDTIPECDESDVSTVDSGRWISFQMATTAPTSPTYNLVNPGASTSNSMEI-------------EGTAGRGGAEFEFDKGRVTPWEGERIHEVAAEELELTLGVG 296 HSP 2 Score: 87.8113 bits (216), Expect = 1.740e-18 Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 1 Query: 4 TGGVSSGRLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 +G ++GR PTWKERENNKRRERRRRAIAAKI++GLR+ GN+ LPKHCDNNEVLKALC EAGW+VE+DGTTYRK Sbjct: 3 SGAAAAGRTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYNLPKHCDNNEVLKALCREAGWVVEDDGTTYRK 76
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BZR1_ORYSI (Protein BZR1 homolog 1 OS=Oryza sativa subsp. indica OX=39946 GN=BZR1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.247e-28 Identity = 93/188 (49.47%), Postives = 117/188 (62.23%), Query Frame = 3 Query: 456 NPSSFLLLPFIRNM-NLPPLRISNXXXXXXXXXXXXXXXXXK-RKANFESFVIPNASTLNPFIHPLFXXXXXXXXXXXXXXXVGTFTIPEHDESDASTIDSGRWVSFH-NSPAPPSPTFNLMNPAIMHHQQHMIIPKDSSADMQWGAVGERGIGGSDFDFENGSVKAWEGERIHEVGMDELDLTLGFG 1010 NPS+ LLPF+R + NLPPLR+S+SAPVTPPLSSPT+ K RK +++ ++PF HP FA SAP+SP+R TIPE DESD ST+DSGRW+SF + AP SPT+NL+NP I G G GG++F+F+ G V WEGERIHEV +EL+LTLG G Sbjct: 132 NPSASCLLPFLRGLPNLPPLRVSSSAPVTPPLSSPTASRPPKIRKPDWD---------VDPFRHPFFAVSAPASPTRGRRLE-HPDTIPECDESDVSTVDSGRWISFQMATTAPTSPTYNLVNPGASTSNSMEI-------------EGTAGRGGAEFEFDKGRVTPWEGERIHEVAAEELELTLGVG 296 HSP 2 Score: 87.8113 bits (216), Expect = 1.740e-18 Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 1 Query: 4 TGGVSSGRLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 +G ++GR PTWKERENNKRRERRRRAIAAKI++GLR+ GN+ LPKHCDNNEVLKALC EAGW+VE+DGTTYRK Sbjct: 3 SGAAAAGRTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYNLPKHCDNNEVLKALCREAGWVVEDDGTTYRK 76
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BEH1_ARATH (BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana OX=3702 GN=BEH1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.822e-21 Identity = 62/71 (87.32%), Postives = 69/71 (97.18%), Query Frame = 1 Query: 13 VSSGRLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 ++GR+PTWKERENNK+RERRRRAIAAKI++GLRSQGN+KLPKHCDNNEVLKALCLEAGWIV EDGTTYRK Sbjct: 10 AATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRK 80 HSP 2 Score: 62.3882 bits (150), Expect = 7.260e-10 Identity = 66/191 (34.55%), Postives = 90/191 (47.12%), Query Frame = 3 Query: 456 NPSSFLLLPFIRNM----NLPPLRISNXXXXXXXXXXXXXXXXXKRKANFESFVIPNASTLNPFIHPLFXXXXXXXXXXXXXXXVGTFTIPEHDESDASTIDSGRWVSFH----NSPAPPSPTFNLMNPAIMHHQQHMIIPKDSSADMQWGAVGERGIGGSDFDFENGSVKAWEGERIHEVGMDELDLTLG 1004 N SS L+P+++N+ NL PLRISNSAPVTPP+SSP + +F + S+ +H +IPE DESD ST+DS RW +F + PPSPTFNL+ ++ + SVK WEGE+IH+VG+D+L+LTLG Sbjct: 128 NQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNPRLPRWQSSNFPVSAPSSPTRRLHHYT-------------------SIPECDESDVSTVDSCRWGNFQSVNVSQTCPPSPTFNLVGKSVSSVGVDV------------------------------SVKPWEGEKIHDVGIDDLELTLG 269
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BZR2_ARATH (Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana OX=3702 GN=BZR2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 8.478e-21 Identity = 92/199 (46.23%), Postives = 116/199 (58.29%), Query Frame = 3 Query: 474 LLPFIRN----MNLPPLRISNXXXXXXXXXXXXXXXXXKRKANFESFVIPNAS-----TLNPFIHPLFXXXXXXXXXXXXXXXVGTFTIPEHDESDASTIDSGRWVSFHN---------SPAPPSPTFNLMNPAIMHHQQHMIIPKDSSADMQWGAVGERGIGGSDFDFENGSVKAWEGERIHEVGMDELDLTLGFGKA 1016 + PF+RN +LPPLRISNSAPVTPP+SSPTSR K +ESF + S ++ +P +A SAP+SP+ TIPE DESD+ST+DSG W+SF S P SPTFNL+ PA P+ S + A+ E G S+F FEN VK WEGERIH+V M++L+LTLG GKA Sbjct: 150 IFPFLRNGGIPSSLPPLRISNSAPVTPPVSSPTSRNP-KPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAPA-TIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPA----------PQQLSPNT--AAIQEIG-QSSEFKFENSQVKPWEGERIHDVAMEDLELTLGNGKA 333 HSP 2 Score: 88.5817 bits (218), Expect = 1.370e-18 Identity = 56/67 (83.58%), Postives = 64/67 (95.52%), Query Frame = 1 Query: 25 RLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 R P+W+ERENN+RRERRRRA+AAKIY+GLR+QGN+ LPKHCDNNEVLKALC EAGW+VEEDGTTYRK Sbjct: 22 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEEDGTTYRK 88
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BZR1_ARATH (Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana OX=3702 GN=BZR1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.696e-20 Identity = 56/112 (50.00%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 708 TIPEHDESDASTIDSGRWVSFHN---------SPAPPSPTFNLMNPAIMHHQQHMIIPKDSSADMQWGAVGERGIGGSDFDFENGSVKAWEGERIHEVGMDELDLTLGFGKA 1016 TIPE DESD+ST+DSG W+SF S P SPTFNL+ PA P+ S + A E G S+F FEN VK WEGERIH+VGM++L+LTLG GKA Sbjct: 236 TIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPA----------PQQMSPNT--AAFQEIG-QSSEFKFENSQVKPWEGERIHDVGMEDLELTLGNGKA 334 HSP 2 Score: 87.8113 bits (216), Expect = 2.610e-18 Identity = 55/67 (82.09%), Postives = 65/67 (97.01%), Query Frame = 1 Query: 25 RLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 R P+W+ERENN+RRERRRRA+AAKIY+GLR+QG++ LPKHCDNNEVLKALC+EAGW+VEEDGTTYRK Sbjct: 23 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEEDGTTYRK 89
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BZR4_ORYSJ (Protein BZR1 homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BZR4 PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.791e-17 Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 1 MTGGVSSGRLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 M G GR+PTW+ERENN+RRERRRRAIAAKIY+GLR+ GN+ LPKHCDNNEVLKALC EAGW VE DGTTYRK Sbjct: 1 MMNGGGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRK 75
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana OX=3702 GN=BEH3 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.927e-17 Identity = 62/75 (82.67%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 1 MTGGVSSGRLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 MT G R PTWKERENNKRRERRRRAIAAKI++GLR GNFKLPKHCDNNEVLKALC EAGW VE+DGTTYRK Sbjct: 1 MTSGT---RTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRK 72
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana OX=3702 GN=BEH4 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.758e-17 Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 1 MTGGVSSGRLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 MT G R+PTW+ERENNKRRERRRRAIAAKI++GLR GN++LPKHCDNNEVLKALC EAGWIVE DGTTYRK Sbjct: 1 MTSGT---RMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRK 72
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Match: BZR2_ORYSJ (Protein BZR1 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BZR2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.484e-16 Identity = 56/67 (83.58%), Postives = 63/67 (94.03%), Query Frame = 1 Query: 25 RLPTWXXXXXXXXXXXXXXXXXXXXYSGLRSQGNFKLPKHCDNNEVLKALCLEAGWIVEEDGTTYRK 225 R+PTW+ERENNKRRERRRRAIAAKI++GLR+ G +KLPKHCDNNEVLKALC EAGW+VE DGTTYRK Sbjct: 31 RMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRK 97 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_22797 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_22797_La_Tanjil_v1.0 ID=rna-TanjilR_22797_La_Tanjil_v1.0; Name=rna-TanjilR_22797; organism=Lupinus angustifolius; type=mRNA; length=1019bpback to top protein sequence of rna-TanjilR_22797_La_Tanjil_v1.0 >rna-TanjilR_22797_La_Tanjil_v1.0 ID=rna-TanjilR_22797_La_Tanjil_v1.0; Name=rna-TanjilR_22797_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=309bpback to top mRNA from alignment at Chr_LG06-CM007366.1:1128222..1129240+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_22797_La_Tanjil_v1.0 ID=rna-TanjilR_22797_La_Tanjil_v1.0; Name=rna-TanjilR_22797; organism=Lupinus angustifolius; type=mRNA; length=1019bp; location=Sequence derived from: Chr_LG06-CM007366.1:1128222..1129240+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG06-CM007366.1:1128222..1129240+ >rna-TanjilR_22797_La_Tanjil_v1.0 ID=rna-TanjilR_22797_La_Tanjil_v1.0; Name=rna-TanjilR_22797; organism=Lupinus angustifolius; type=CDS; length=930bp; location=Sequence derived from: Chr_LG06-CM007366.1:1128222..1129240+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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