rna-TanjilR_22818
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR_HORVV (Soluble inorganic pyrophosphatase OS=Hordeum vulgare subsp. vulgare OX=112509 GN=IPP PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.560e-20 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDR+LYSSVVYPHNYGFIPRT+CED DPMDVLVLMQ
Sbjct: 79 VDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQ 114 HSP 2 Score: 46.2098 bits (108), Expect = 3.560e-20 Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPV+PGSFLRARAIG+MPMIDQ
Sbjct: 115 EPVIPGSFLRARAIGLMPMIDQ 136 HSP 3 Score: 56.225 bits (134), Expect = 2.242e-7 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRF 2572
L+ ++ QGE+DDKIIAVCADDPEYRHY+ L P RL EI+R
Sbjct: 130 LMPMIDQGEKDDKIIAVCADDPEYRHYSTSVSLLP-RLQEIKRL 172
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays OX=4577 GN=IPP PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.825e-20 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDR+LYSSVVYPHNYGF+PRT+CED DPMDVLVLMQ
Sbjct: 76 VDRVLYSSVVYPHNYGFVPRTLCEDNDPMDVLVLMQ 111 HSP 2 Score: 46.2098 bits (108), Expect = 4.825e-20 Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPV+PGSFLRARAIG+MPMIDQ
Sbjct: 112 EPVVPGSFLRARAIGLMPMIDQ 133 HSP 3 Score: 79.337 bits (194), Expect = 2.589e-15 Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVCADDPEYRHY D+ EL PHRL EI+RFFED
Sbjct: 127 LMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFED 173
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR3_ARATH (Soluble inorganic pyrophosphatase 3 OS=Arabidopsis thaliana OX=3702 GN=PPA3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.106e-19 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDRILYSSVVYPHNYGFIPRT+CED DP+DVLVLMQ
Sbjct: 78 VDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQ 113 HSP 2 Score: 45.4394 bits (106), Expect = 1.106e-19 Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPVLPG FLRARAIG+MPMIDQ
Sbjct: 114 EPVLPGCFLRARAIGLMPMIDQ 135 HSP 3 Score: 79.7221 bits (195), Expect = 2.295e-15 Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVCADDPEY+H+TD+K+L PHRL EIRRFFED
Sbjct: 129 LMPMIDQGEKDDKIIAVCADDPEYKHFTDIKQLAPHRLQEIRRFFED 175
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=PPA2 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.380e-19 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDR+LYSS+VYPHNYGFIPRTICED DPMDVLVLMQ
Sbjct: 80 VDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQ 115 HSP 2 Score: 44.2838 bits (103), Expect = 1.380e-19 Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPVL GSFLRARAIG+MPMIDQ
Sbjct: 116 EPVLTGSFLRARAIGLMPMIDQ 137 HSP 3 Score: 84.7297 bits (208), Expect = 4.770e-17 Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVCADDPE+RHY D+KELPPHRLAEIRRFFED
Sbjct: 131 LMPMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFED 177
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase PPA1 OS=Solanum tuberosum OX=4113 GN=PPA1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.718e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDRILYSSVVYP NYGFIPRT+CED DPMDVLVLMQ
Sbjct: 73 VDRILYSSVVYPQNYGFIPRTLCEDNDPMDVLVLMQ 108 HSP 2 Score: 45.0542 bits (105), Expect = 5.718e-19 Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPVLPG FLRARAIG+MPMIDQ
Sbjct: 109 EPVLPGCFLRARAIGLMPMIDQ 130 HSP 3 Score: 87.8113 bits (216), Expect = 3.788e-18 Identity = 39/47 (82.98%), Postives = 45/47 (95.74%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVCADDPEYRHYTD+K+LPPHRLAEIRRFFED
Sbjct: 124 LMPMIDQGEKDDKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFFED 170
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica OX=39947 GN=IPP PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.906e-19 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQVEM 1437
VDR+LYSSVVYPHNYGFIPRT+CEDGDPMDVLVLMQ ++
Sbjct: 76 VDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQV 114 HSP 2 Score: 40.817 bits (94), Expect = 5.906e-19 Identity = 18/22 (81.82%), Postives = 20/22 (90.91%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
E V+PG FLRARAIG+MPMIDQ
Sbjct: 112 EQVVPGCFLRARAIGLMPMIDQ 133 HSP 3 Score: 81.2629 bits (199), Expect = 5.911e-16 Identity = 36/47 (76.60%), Postives = 43/47 (91.49%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVCADDPEYRH+ D+KE+PPHRL EIRRFFED
Sbjct: 127 LMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFED 173
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica OX=39946 GN=IPP PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.906e-19 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQVEM 1437
VDR+LYSSVVYPHNYGFIPRT+CEDGDPMDVLVLMQ ++
Sbjct: 76 VDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQV 114 HSP 2 Score: 40.817 bits (94), Expect = 5.906e-19 Identity = 18/22 (81.82%), Postives = 20/22 (90.91%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
E V+PG FLRARAIG+MPMIDQ
Sbjct: 112 EQVVPGCFLRARAIGLMPMIDQ 133 HSP 3 Score: 81.2629 bits (199), Expect = 5.911e-16 Identity = 36/47 (76.60%), Postives = 43/47 (91.49%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVCADDPEYRH+ D+KE+PPHRL EIRRFFED
Sbjct: 127 LMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFED 173
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1 OS=Arabidopsis thaliana OX=3702 GN=PPA1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.435e-19 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDRILYSSVVYPHNYGF+PRT+CED DP+DVLV+MQ
Sbjct: 74 VDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQ 109 HSP 2 Score: 45.4394 bits (106), Expect = 7.435e-19 Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPVLPG FLRARAIG+MPMIDQ
Sbjct: 110 EPVLPGCFLRARAIGLMPMIDQ 131 HSP 3 Score: 84.3445 bits (207), Expect = 5.571e-17 Identity = 37/47 (78.72%), Postives = 44/47 (93.62%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVC DDPEY+HYTD+KELPPHRL+EIRRFFED
Sbjct: 125 LMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFED 171
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR5_ARATH (Soluble inorganic pyrophosphatase 5 OS=Arabidopsis thaliana OX=3702 GN=PPA5 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.403e-19 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDRILYSSVVYPHNYGF+PRT+CED DP+DVLV+MQ
Sbjct: 78 VDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQ 113 HSP 2 Score: 45.0542 bits (105), Expect = 8.403e-19 Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPVLPG FLRARAIG+MPMIDQ
Sbjct: 114 EPVLPGCFLRARAIGLMPMIDQ 135 HSP 3 Score: 78.5666 bits (192), Expect = 5.304e-15 Identity = 34/47 (72.34%), Postives = 42/47 (89.36%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVC DDPEY+H T++ ELPPHRL+EIRRFFED
Sbjct: 129 LMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFED 175
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Match: IPYR4_ARATH (Soluble inorganic pyrophosphatase 4 OS=Arabidopsis thaliana OX=3702 GN=PPA4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.524e-18 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1321 VDRILYSSVVYPHNYGFIPRTICEDGDPMDVLVLMQ 1428
VDRILYSSVVYPHNYGFIPRT+CED DP+DVLV+MQ
Sbjct: 78 VDRILYSSVVYPHNYGFIPRTLCEDSDPIDVLVIMQ 113 HSP 2 Score: 43.1282 bits (100), Expect = 2.524e-18 Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 3
Query: 1530 EPVLPGSFLRARAIGVMPMIDQ 1595
EPV+PG FLRA+AIG+MPMIDQ
Sbjct: 114 EPVIPGCFLRAKAIGLMPMIDQ 135 HSP 3 Score: 84.3445 bits (207), Expect = 5.798e-17 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 2
Query: 2441 LLLILVQGEEDDKIIAVCADDPEYRHYTDVKELPPHRLAEIRRFFED 2581
L+ ++ QGE+DDKIIAVCADDPEYRHY D+ ELPPHR+AEIRRFFED
Sbjct: 129 LMPMIDQGEKDDKIIAVCADDPEYRHYNDISELPPHRMAEIRRFFED 175 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_22818 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_22818_La_Tanjil_v1.0 ID=rna-TanjilR_22818_La_Tanjil_v1.0; Name=rna-TanjilR_22818; organism=Lupinus angustifolius; type=mRNA; length=2941bpback to top protein sequence of rna-TanjilR_22818_La_Tanjil_v1.0 >rna-TanjilR_22818_La_Tanjil_v1.0 ID=rna-TanjilR_22818_La_Tanjil_v1.0; Name=rna-TanjilR_22818_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=213bpback to top mRNA from alignment at Chr_LG06-CM007366.1:1303114..1306054+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_22818_La_Tanjil_v1.0 ID=rna-TanjilR_22818_La_Tanjil_v1.0; Name=rna-TanjilR_22818; organism=Lupinus angustifolius; type=mRNA; length=2941bp; location=Sequence derived from: Chr_LG06-CM007366.1:1303114..1306054+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG06-CM007366.1:1303114..1306054+ >rna-TanjilR_22818_La_Tanjil_v1.0 ID=rna-TanjilR_22818_La_Tanjil_v1.0; Name=rna-TanjilR_22818; organism=Lupinus angustifolius; type=CDS; length=642bp; location=Sequence derived from: Chr_LG06-CM007366.1:1303114..1306054+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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