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Transcript Overview
Name | rna-TanjilR_01336 |
Unique Name | rna-TanjilR_01336_La_Tanjil_v1.0 |
Type | mRNA |
Organism | Lupinus angustifolius (blue lupin) |
Sequence length | 4166 |
Product | hypothetical protein |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_01336 | rna-TanjilR_01336_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
rna-TanjilR_01336_La_Tanjil_v1.0 | rna-TanjilR_01336_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778080..29778113 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778080..29778113 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778213..29778279 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778213..29778279 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778648..29778683 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778648..29778683 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778830..29778974 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778830..29778974 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779126..29779284 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779126..29779284 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779413..29779483 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779413..29779483 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779563..29779641 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779563..29779641 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779756..29779871 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779756..29779871 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29780165..29780312 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29780165..29780312 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29781065..29781134 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29781065..29781134 | Lupinus angustifolius | exon |
rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29782088..29782245 | rna-TanjilR_01336_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29782088..29782245 | Lupinus angustifolius | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778080..29778113 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778080..29778113 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778213..29778279 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778213..29778279 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778648..29778683 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778648..29778683 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778830..29778974 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29778830..29778974 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779126..29779284 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779126..29779284 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779413..29779483 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779413..29779483 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779563..29779641 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779563..29779641 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779756..29779871 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29779756..29779871 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29780165..29780312 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29780165..29780312 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29781065..29781134 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29781065..29781134 | Lupinus angustifolius | CDS |
rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29782088..29782245 | rna-TanjilR_01336_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29782088..29782245 | Lupinus angustifolius | CDS |
Homology
BLAST of rna-TanjilR_01336 vs. DB:Swiss
Match: OEP80_ARATH (Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP80 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.143e-8 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 2
Query: 2087 LTGGSIVGDMAPYQAFSIGGLGSVRGYGEGAVGSGRSCLVANSELTLPL 2233
L+GG +VG +P++AF IGG SVRGY EGAVGSGRS +V + EL+ P+
Sbjct: 610 LSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPV 658
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000184 | Bacterial surface antigen (D15) | PFAM | PF01103 | Bac_surface_Ag | coord: 53..352 e-value: 2.2E-22 score: 80.0 |
None | No IPR available | GENE3D | 2.40.160.50 | | coord: 43..357 e-value: 7.5E-16 score: 60.6 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01336_La_Tanjil_v1.0 ID=rna-TanjilR_01336_La_Tanjil_v1.0; Name=rna-TanjilR_01336; organism=Lupinus angustifolius; type=mRNA; length=4166bp ATGGGAGCTCAGAAGAGCATCCTTGCTGGAAAAGGTTAGTGTTCAATTCA TAATCCTTCATTTTTGTTCCCTTAATtgcaaaaaaaatctaatttttgTT GCATTCTAATATATGTTATGGGTTGTTTAACAGCCAAAATTGATGTTAAT GTTGATCTTACTCATAAGCTATGCGCTTCTTTGATGTTTCCTACCCTCAG GTTTGTCTTCTCAATTCCATCTTTAAGAGAgaaatttttactttttgttg ttcAGAGAAAAACTCTAGTTTTTGTTATTCAAATTGCAAGCATATGTTAT ATTTGTCCATGATTCtagaaaattattatattatattagtcCTTAAAATT GTAAGCTTTGGTGTATGTATTAGTTCCTCATTAGTTTACTCATATTAATC CATGCATATGGACCAATTTGATTGACATGTATAATAGTTTTAGTGACTAA TGTTAATTTCCCAAAATCTGACTTATATAATGTTAGAAATTGGAATGATG AGTGGTGATTTGTTACTTTGTTTACTTAATTTATCTTGCTGGTTATGACA TTTCGTTTTCGTGAACAGGAGTTCTAGCAGTCCGCTTTCACTGGTAATTG GGAGGTAAGAATATTATTTTGCTTCGTTCATGTTACTAATTGTATGAGGT TTCCATGATTAAGTTATTATCATGTTGTACTCTTAGAACTGTGTTGTTCT ACATTGGTTCTTTACTCCTTAAATAAATACTTTTACTTCTCCATGATTAG TCTTTGCGTCAAACACCCAAACTTATTTGGTGGAAGTGAGAAGCTCGATG TTTCGTGGGACAAGGGTTTATATGATTCGAATATCTTGGTTGCATACAGA AGGCCTCGACCTGAATGGCTTGCTCAGCAATCTTTTGTATTGCAggttgg atttatttttttatgatcattattatattttacgGCATAAGACTAAGACA TGATGCTGTACAATAATCTCTAAAATCTACAAAATTGAGTAAAAGTGTAT agcatattctgaaattatatttgttgtCACCCTTTTGTGTTTTCAGCATT CTCTTTCACCTGAGATTGGAGTCCACGGTATCCCTGTAGACAATTTCTCT CGATCTGGAAGTGGAGGTGTAAATTTATCTCGATTGTCAATGGGGCTGGA CCTGAAAGAACCCGTGAGTTCAAAATGGAGCAGCACAACCAGCATAAAGT TTGAGGTTCCGCCATACTTTTCACAAAACTGTCATTATACTATATTGGCC TGCATGTGTTTCCTTTCTTTACCTTAACCTTTTGATTTGGTTTTACGCAA AGTGGATACTAATTATTGCAAACCTTCATGCAGCATGTTCGTCCATTGAG TGATGATGGCCACGCTATAAGTAGAGATTATGATGGGTTTCCTTTGACTT GCAGGTAATGAAGGATCCTATTATTTCAGTTCTGAAAATTTTCCCACTGA TTTTGATCATATGATGTACATTGCTTGTTGCAGTGGCAATCCACATGACA GTATGGTAGTGTTAAAGCAGGAGTCTCGATTTGCGAAGGCGACTGATCGT AGTTTTTTCCATGTAACATATTCTTATTTCCACTTGCTTCCTATTATCTA TGAGTAATTGTCTGTGTTTATTTCGCAACATAAATTTTGATTGTGTTCCA CTTGATTGAATGCCTATCCTTTTCAGTTCAATCTACAAATAGAACAAGGT ATTCCAGTTCTTTCTAAGTGGCTAATCTTCAACCGATTTAAATTTGCTGC TTCGAAAGGAATCAAACTTGGACCAGCATTTCTCTTGACAAGGTTGGTAT TCTCCAAGAAGGTCTATTTGATATAGTTAAGAGGCTAGAAACGGTGAATG CTAATAATGTAAACCTATGAAATGGTTAATGTGTGTTGTATGAGGCTCAA ACTCATTAAGAAACTGTGATATGATTGATACCAATGGGATTCATCACACT TTAAGTAAGAATTACTAATTTGATGGGGAATTGTGTGCGTATGTGAGGGC GGATCCATTTACGCCACTATAAACCGTTTTCTACTTGCACTCAtagatgt tattttattatcatcacTACCTTTTCTATTGCCAGACTCACTGGTGGTTC AATTGTGGGGGACATGGCACCTTACCAAGCATTTTCCATTGGAGGTCTCG GAAGTGTTCGAGGGTATGGCGAAGGAGCAGTCGGATCTGGACGATCATGT TTGGTGGCTAATAGTGAACTGACACTCCCTTTGGTAAGTAATACCTTAAT ATTCTGCATCCTTATAAGTTGAAATTGGACATATTAGTAGCTTTCTTTAT TACTCATGGTTTTGTTGGCTTTAAAGTTTAAAGTCTGAATCTTTAGTGTC ATATCTTCCttgataaattaattttaaggtTTCATTTATGTGGAAAATTT CACTTTTCTCCATTATTGTAACATCCcagttctgacatgcgacctcccag ACCCATGAATATGAATATAACGAGTGTGTCACTGGTAACACCTCAGTCTT GACATGCGACTTTCCCGGCTCATGAATACACTAAGCGTGCCACCCaccag cttaaatactccctgcagtattttattccctaCAAAGGGAGCCTTCCAcg actcgaacccgtgacctcaggGACAAATAGTCATTATTCACGTGAGTCGC TGCCATTAAGCATACGGTTGATTGTCACTTTTGGAATTGAAATCTTACCC AATGTATCAGAATCAGCCCATCCTGCCCTTCCACTCTGCTTCCATGAGTC ACAATGAGAATACCTTGTATATGATTGAAATGTTTAATATTCAGGTCTTT TATGAACTAATGCCatctattttcattaaaattagttttatttttcattt tcccaGTGCGCTGTAACAAGCACAAGACAGGTTTAAACATGTGAACGTTT ACGTGCTAATCTTTTGAATGTTATcacatatattgttatattgaAATGTC CTATACTAAACTACTTGATATCTTCTTTACTATAGAATAACATGTTAGAA GGTGCCCTTTTCTTGGATTGTGGAACAGACTTGCGGTCTGGTCATCTTGT ACCGGGTGAGTTCACGAGTTCTCGAACTGTTTCAAGCTGTTAAGGTTATC TAATCACAGTGACTTTCTCTGTATAGAGTAAACTACTATTATGGTTGATA ATTGATTGATATTATAATGCCTAAAGAAATCTGTTTATTACTTCCAAAAG CATTGACTGGTTCGAAGAACCTTCATTGAAGAACCAAGTAAAAAGGCTTG ATCGGGGTCGAGAGCTTCTTGTATTAGGGAATACCATATTAGCAAAAACA CTGCATGCAataaattaacatccaaaatttAGCCTTTGTACTTGAAGTAA TTACAACAGTTTCTTCTCCTGCATAAGTTTAAATCAGACTTTAGTAGGCG ACATTCATTCTCGGCCTTTCCCCAATTATCTTACTGTTTTTGTTTACATT TCTAGTTCCAAGTTGTGCAAGTCCATATAGAAAAACACCATTTTATGGAT TTGATGGAATGAAAAGGTTCCATTATGCAGAGAGAATAGCCCAACAGGTA TATAAACCATCCCGAGACGATGAGGCAGGTGATATGAGACTTACTTCCTC TTATTTTGTCATTCCGGTGGTAGGAGAAAGTTGCTAGGAGCCACATTTTC CATGGTAAAATAAGGGCTAGAATTCTAAGAAACCAAGGGCTAGACCATAT ACCTCATTATCTAAAGTTCCATCATGGAGTTTTATGAAGAGTTGAGTATC CAAGTCTGAAACAAATTATAGTGTCTTATGAGTGGAATCAATCATCTAAA AGCATATATTCAATTGCAACTATATATCCAAAACAACAGTCATTATATTT CAATTCTACTTTAATGAGTTTCCTTAAAAAGATTTCATTTTTGGTCTTTC TTCGGAGCTGGTGTGTTTAATTGTCAATTTGTCATAACTTGCAATTAGTT TTGTTCTGTTTTATTCTTGGATTGCTCTCATGGTGTTGTTAATGTgttgg aaattcaggaaatccAGCCTTAAGGCATGGTAAACCAGGATCTGGTGTTG GATTGGGATACGGACTTCGATTTAAATCACAGTTTGGTCACTTTCAAGTC GATTATGCAGTCAATGCATTTCAGCAGAAAACTCTCTATTTTGGCCTCAG CAACCTTGCTTCTTGA back to topprotein sequence of rna-TanjilR_01336_La_Tanjil_v1.0 >rna-TanjilR_01336_La_Tanjil_v1.0 ID=rna-TanjilR_01336_La_Tanjil_v1.0; Name=rna-TanjilR_01336_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=360bp MGAQKSILAGKAKIDVNVDLTHKLCASLMFPTLRSSSSPLSLVIGSLCVK HPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPE IGVHGIPVDNFSRSGSGGVNLSRLSMGLDLKEPVSSKWSSTTSIKFEHVR PLSDDGHAISRDYDGFPLTCSGNPHDSMVVLKQESRFAKATDRSFFHFNL QIEQGIPVLSKWLIFNRFKFAASKGIKLGPAFLLTRLTGGSIVGDMAPYQ AFSIGGLGSVRGYGEGAVGSGRSCLVANSELTLPLNNMLEGALFLDCGTD LRSGHLVPGNPALRHGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKT LYFGLSNLAS back to topmRNA from alignment at Chr_LG06-CM007366.1:29778080..29782245+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_01336_La_Tanjil_v1.0 ID=rna-TanjilR_01336_La_Tanjil_v1.0; Name=rna-TanjilR_01336; organism=Lupinus angustifolius; type=mRNA; length=4166bp; location=Sequence derived from: Chr_LG06-CM007366.1:29778080..29782245+ (Lupinus angustifolius ATGGGAGCTCAGAAGAGCATCCTTGCTGGAAAAGGTTAGTGTTCAATTCA
TAATCCTTCATTTTTGTTCCCTTAATtgcaaaaaaaatctaatttttgTT
GCATTCTAATATATGTTATGGGTTGTTTAACAGCCAAAATTGATGTTAAT
GTTGATCTTACTCATAAGCTATGCGCTTCTTTGATGTTTCCTACCCTCAG
GTTTGTCTTCTCAATTCCATCTTTAAGAGAgaaatttttactttttgttg
ttcAGAGAAAAACTCTAGTTTTTGTTATTCAAATTGCAAGCATATGTTAT
ATTTGTCCATGATTCtagaaaattattatattatattagtcCTTAAAATT
GTAAGCTTTGGTGTATGTATTAGTTCCTCATTAGTTTACTCATATTAATC
CATGCATATGGACCAATTTGATTGACATGTATAATAGTTTTAGTGACTAA
TGTTAATTTCCCAAAATCTGACTTATATAATGTTAGAAATTGGAATGATG
AGTGGTGATTTGTTACTTTGTTTACTTAATTTATCTTGCTGGTTATGACA
TTTCGTTTTCGTGAACAGGAGTTCTAGCAGTCCGCTTTCACTGGTAATTG
GGAGGTAAGAATATTATTTTGCTTCGTTCATGTTACTAATTGTATGAGGT
TTCCATGATTAAGTTATTATCATGTTGTACTCTTAGAACTGTGTTGTTCT
ACATTGGTTCTTTACTCCTTAAATAAATACTTTTACTTCTCCATGATTAG
TCTTTGCGTCAAACACCCAAACTTATTTGGTGGAAGTGAGAAGCTCGATG
TTTCGTGGGACAAGGGTTTATATGATTCGAATATCTTGGTTGCATACAGA
AGGCCTCGACCTGAATGGCTTGCTCAGCAATCTTTTGTATTGCAggttgg
atttatttttttatgatcattattatattttacgGCATAAGACTAAGACA
TGATGCTGTACAATAATCTCTAAAATCTACAAAATTGAGTAAAAGTGTAT
agcatattctgaaattatatttgttgtCACCCTTTTGTGTTTTCAGCATT
CTCTTTCACCTGAGATTGGAGTCCACGGTATCCCTGTAGACAATTTCTCT
CGATCTGGAAGTGGAGGTGTAAATTTATCTCGATTGTCAATGGGGCTGGA
CCTGAAAGAACCCGTGAGTTCAAAATGGAGCAGCACAACCAGCATAAAGT
TTGAGGTTCCGCCATACTTTTCACAAAACTGTCATTATACTATATTGGCC
TGCATGTGTTTCCTTTCTTTACCTTAACCTTTTGATTTGGTTTTACGCAA
AGTGGATACTAATTATTGCAAACCTTCATGCAGCATGTTCGTCCATTGAG
TGATGATGGCCACGCTATAAGTAGAGATTATGATGGGTTTCCTTTGACTT
GCAGGTAATGAAGGATCCTATTATTTCAGTTCTGAAAATTTTCCCACTGA
TTTTGATCATATGATGTACATTGCTTGTTGCAGTGGCAATCCACATGACA
GTATGGTAGTGTTAAAGCAGGAGTCTCGATTTGCGAAGGCGACTGATCGT
AGTTTTTTCCATGTAACATATTCTTATTTCCACTTGCTTCCTATTATCTA
TGAGTAATTGTCTGTGTTTATTTCGCAACATAAATTTTGATTGTGTTCCA
CTTGATTGAATGCCTATCCTTTTCAGTTCAATCTACAAATAGAACAAGGT
ATTCCAGTTCTTTCTAAGTGGCTAATCTTCAACCGATTTAAATTTGCTGC
TTCGAAAGGAATCAAACTTGGACCAGCATTTCTCTTGACAAGGTTGGTAT
TCTCCAAGAAGGTCTATTTGATATAGTTAAGAGGCTAGAAACGGTGAATG
CTAATAATGTAAACCTATGAAATGGTTAATGTGTGTTGTATGAGGCTCAA
ACTCATTAAGAAACTGTGATATGATTGATACCAATGGGATTCATCACACT
TTAAGTAAGAATTACTAATTTGATGGGGAATTGTGTGCGTATGTGAGGGC
GGATCCATTTACGCCACTATAAACCGTTTTCTACTTGCACTCAtagatgt
tattttattatcatcacTACCTTTTCTATTGCCAGACTCACTGGTGGTTC
AATTGTGGGGGACATGGCACCTTACCAAGCATTTTCCATTGGAGGTCTCG
GAAGTGTTCGAGGGTATGGCGAAGGAGCAGTCGGATCTGGACGATCATGT
TTGGTGGCTAATAGTGAACTGACACTCCCTTTGGTAAGTAATACCTTAAT
ATTCTGCATCCTTATAAGTTGAAATTGGACATATTAGTAGCTTTCTTTAT
TACTCATGGTTTTGTTGGCTTTAAAGTTTAAAGTCTGAATCTTTAGTGTC
ATATCTTCCttgataaattaattttaaggtTTCATTTATGTGGAAAATTT
CACTTTTCTCCATTATTGTAACATCCcagttctgacatgcgacctcccag
ACCCATGAATATGAATATAACGAGTGTGTCACTGGTAACACCTCAGTCTT
GACATGCGACTTTCCCGGCTCATGAATACACTAAGCGTGCCACCCaccag
cttaaatactccctgcagtattttattccctaCAAAGGGAGCCTTCCAcg
actcgaacccgtgacctcaggGACAAATAGTCATTATTCACGTGAGTCGC
TGCCATTAAGCATACGGTTGATTGTCACTTTTGGAATTGAAATCTTACCC
AATGTATCAGAATCAGCCCATCCTGCCCTTCCACTCTGCTTCCATGAGTC
ACAATGAGAATACCTTGTATATGATTGAAATGTTTAATATTCAGGTCTTT
TATGAACTAATGCCatctattttcattaaaattagttttatttttcattt
tcccaGTGCGCTGTAACAAGCACAAGACAGGTTTAAACATGTGAACGTTT
ACGTGCTAATCTTTTGAATGTTATcacatatattgttatattgaAATGTC
CTATACTAAACTACTTGATATCTTCTTTACTATAGAATAACATGTTAGAA
GGTGCCCTTTTCTTGGATTGTGGAACAGACTTGCGGTCTGGTCATCTTGT
ACCGGGTGAGTTCACGAGTTCTCGAACTGTTTCAAGCTGTTAAGGTTATC
TAATCACAGTGACTTTCTCTGTATAGAGTAAACTACTATTATGGTTGATA
ATTGATTGATATTATAATGCCTAAAGAAATCTGTTTATTACTTCCAAAAG
CATTGACTGGTTCGAAGAACCTTCATTGAAGAACCAAGTAAAAAGGCTTG
ATCGGGGTCGAGAGCTTCTTGTATTAGGGAATACCATATTAGCAAAAACA
CTGCATGCAataaattaacatccaaaatttAGCCTTTGTACTTGAAGTAA
TTACAACAGTTTCTTCTCCTGCATAAGTTTAAATCAGACTTTAGTAGGCG
ACATTCATTCTCGGCCTTTCCCCAATTATCTTACTGTTTTTGTTTACATT
TCTAGTTCCAAGTTGTGCAAGTCCATATAGAAAAACACCATTTTATGGAT
TTGATGGAATGAAAAGGTTCCATTATGCAGAGAGAATAGCCCAACAGGTA
TATAAACCATCCCGAGACGATGAGGCAGGTGATATGAGACTTACTTCCTC
TTATTTTGTCATTCCGGTGGTAGGAGAAAGTTGCTAGGAGCCACATTTTC
CATGGTAAAATAAGGGCTAGAATTCTAAGAAACCAAGGGCTAGACCATAT
ACCTCATTATCTAAAGTTCCATCATGGAGTTTTATGAAGAGTTGAGTATC
CAAGTCTGAAACAAATTATAGTGTCTTATGAGTGGAATCAATCATCTAAA
AGCATATATTCAATTGCAACTATATATCCAAAACAACAGTCATTATATTT
CAATTCTACTTTAATGAGTTTCCTTAAAAAGATTTCATTTTTGGTCTTTC
TTCGGAGCTGGTGTGTTTAATTGTCAATTTGTCATAACTTGCAATTAGTT
TTGTTCTGTTTTATTCTTGGATTGCTCTCATGGTGTTGTTAATGTgttgg
aaattcaggaaatccAGCCTTAAGGCATGGTAAACCAGGATCTGGTGTTG
GATTGGGATACGGACTTCGATTTAAATCACAGTTTGGTCACTTTCAAGTC
GATTATGCAGTCAATGCATTTCAGCAGAAAACTCTCTATTTTGGCCTCAG
CAACCTTGCTTCTTGA back to topCoding sequence (CDS) from alignment at Chr_LG06-CM007366.1:29778080..29782245+ >rna-TanjilR_01336_La_Tanjil_v1.0 ID=rna-TanjilR_01336_La_Tanjil_v1.0; Name=rna-TanjilR_01336; organism=Lupinus angustifolius; type=CDS; length=1083bp; location=Sequence derived from: Chr_LG06-CM007366.1:29778080..29782245+ (Lupinus angustifolius ATGGGAGCTCAGAAGAGCATCCTTGCTGGAAAAGCCAAAATTGATGTTAA TGTTGATCTTACTCATAAGCTATGCGCTTCTTTGATGTTTCCTACCCTCA GGAGTTCTAGCAGTCCGCTTTCACTGGTAATTGGGAGTCTTTGCGTCAAA CACCCAAACTTATTTGGTGGAAGTGAGAAGCTCGATGTTTCGTGGGACAA GGGTTTATATGATTCGAATATCTTGGTTGCATACAGAAGGCCTCGACCTG AATGGCTTGCTCAGCAATCTTTTGTATTGCAgCATTCTCTTTCACCTGAG ATTGGAGTCCACGGTATCCCTGTAGACAATTTCTCTCGATCTGGAAGTGG AGGTGTAAATTTATCTCGATTGTCAATGGGGCTGGACCTGAAAGAACCCG TGAGTTCAAAATGGAGCAGCACAACCAGCATAAAGTTTGAGCATGTTCGT CCATTGAGTGATGATGGCCACGCTATAAGTAGAGATTATGATGGGTTTCC TTTGACTTGCAGTGGCAATCCACATGACAGTATGGTAGTGTTAAAGCAGG AGTCTCGATTTGCGAAGGCGACTGATCGTAGTTTTTTCCATTTCAATCTA CAAATAGAACAAGGTATTCCAGTTCTTTCTAAGTGGCTAATCTTCAACCG ATTTAAATTTGCTGCTTCGAAAGGAATCAAACTTGGACCAGCATTTCTCT TGACAAGACTCACTGGTGGTTCAATTGTGGGGGACATGGCACCTTACCAA GCATTTTCCATTGGAGGTCTCGGAAGTGTTCGAGGGTATGGCGAAGGAGC AGTCGGATCTGGACGATCATGTTTGGTGGCTAATAGTGAACTGACACTCC CTTTGAATAACATGTTAGAAGGTGCCCTTTTCTTGGATTGTGGAACAGAC TTGCGGTCTGGTCATCTTGTACCGGgaaatccAGCCTTAAGGCATGGTAA ACCAGGATCTGGTGTTGGATTGGGATACGGACTTCGATTTAAATCACAGT TTGGTCACTTTCAAGTCGATTATGCAGTCAATGCATTTCAGCAGAAAACT CTCTATTTTGGCCTCAGCAACCTTGCTTCTTGA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: INTERPRO
Term | Definition |
IPR000184 | Bac_surfAg_D15 |
Vocabulary: Cellular Component
Term | Definition |
GO:0019867 | outer membrane |
|