rna-TanjilR_01345

Transcript Overview
Namerna-TanjilR_01345
Unique Namerna-TanjilR_01345_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1988
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG06-CM007366.1supercontigChr_LG06-CM007366.1:29864012..29865999 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL105Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL238Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL528Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR587Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR594Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1099Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1106Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1189Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1196Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1198Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0926Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1090Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1128Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0830Pisum sativum Cameor genome v1aPisum sativum
anpvR1076Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1168Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0931Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0995Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1058Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0931Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0969Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0944Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0951Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0984Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1017Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1024Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1024Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1031Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0920Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0932Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0887Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0949Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1038Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1052Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0858Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1015Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1084Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0892Cicer arietinum
ancarR0922Cicer arietinum
ancarR0949Cicer arietinum
anccaR0914Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0942Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0953Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1137Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1142Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1066Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1128Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1143Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1133Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1148Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0894Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1117Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0957Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1200Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr11.1143Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun11g117400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat05G0734800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat5g263600.1Pisum sativum Cameor genome v1aPisum sativum
Vigst.06G141300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_004487359.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014636081.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.6g015400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg5491.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.1g039600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.1g058200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_00710.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Va08G056160.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg44047.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigan.06G151500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_06G00993.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_07121Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Phvul.011G103300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun11g117400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat07G0542600-T2Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cr_08201.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-KK1_030051Cajanus cajan Asha genome v1.0Cajanus cajan
PvulFLAVERTChr11.1000654Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Tiffany.R1.6g011360.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan08g120400Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_24164Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_03108Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_07228Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_01345gene-TanjilG_01345_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01345rna-TanjilR_01345_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_01345_La_Tanjil_v1.0rna-TanjilR_01345_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865963..29865999rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865963..29865999Lupinus angustifoliusCDS
rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865584..29865651rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865584..29865651Lupinus angustifoliusCDS
rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865277..29865329rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865277..29865329Lupinus angustifoliusCDS
rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864211..29864329rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864211..29864329Lupinus angustifoliusCDS
rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864012..29864109rna-TanjilR_01345_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864012..29864109Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865963..29865999rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865963..29865999Lupinus angustifoliusexon
rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865584..29865651rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865584..29865651Lupinus angustifoliusexon
rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865277..29865329rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29865277..29865329Lupinus angustifoliusexon
rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864211..29864329rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864211..29864329Lupinus angustifoliusexon
rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864012..29864109rna-TanjilR_01345_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:29864012..29864109Lupinus angustifoliusexon


Homology
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.612e-23
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNN 1773
            +YLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV N
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN 83          

HSP 2 Score: 63.5438 bits (153), Expect = 1.612e-23
Identity = 27/31 (87.10%), Postives = 31/31 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFGII 1982
            AA+MSA+YEENKDEDGFLYMTYSGENTFG++
Sbjct:   89 AALMSAIYEENKDEDGFLYMTYSGENTFGLL 119          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.612e-23
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNN 1773
            +YLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV N
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN 83          

HSP 2 Score: 63.5438 bits (153), Expect = 1.612e-23
Identity = 27/31 (87.10%), Postives = 31/31 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFGII 1982
            AA+MSA+YEENKDEDGFLYMTYSGENTFG++
Sbjct:   89 AALMSAIYEENKDEDGFLYMTYSGENTFGLL 119          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.586e-23
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNNI 1776
            +YLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV NI
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNI 84          

HSP 2 Score: 60.8474 bits (146), Expect = 4.586e-23
Identity = 26/30 (86.67%), Postives = 30/30 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFGI 1979
            AA+MSA+YEE+KDEDGFLYM+YSGENTFGI
Sbjct:   89 AAIMSAIYEEHKDEDGFLYMSYSGENTFGI 118          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.172e-22
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNN 1773
            +YLVPADLTVGQFVYVVRKRIKLSPEKAIF+FV N
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKN 83          

HSP 2 Score: 61.2326 bits (147), Expect = 1.172e-22
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFG 1976
            A++MSA+YEENKDEDGFLYMTYSGENTFG
Sbjct:   89 ASLMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.172e-22
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNN 1773
            +YLVPADLTVGQFVYVVRKRIKLSPEKAIF+FV N
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKN 83          

HSP 2 Score: 61.2326 bits (147), Expect = 1.172e-22
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFG 1976
            A++MSA+YEENKDEDGFLYMTYSGENTFG
Sbjct:   89 ASLMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.551e-22
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNN 1773
            +YLVPADLTVGQFVYVVRKRIKLS EKAIFIFV N
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 83          

HSP 2 Score: 63.929 bits (154), Expect = 1.551e-22
Identity = 27/32 (84.38%), Postives = 31/32 (96.88%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFGIII 1985
            AA+MSA+YEENKDEDGFLYMTYSGENTFG+ +
Sbjct:   89 AALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 1.551e-22
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNN 1773
            +YLVPADLTVGQFVYVVRKRIKLS EKAIFIFV N
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 83          

HSP 2 Score: 63.929 bits (154), Expect = 1.551e-22
Identity = 27/32 (84.38%), Postives = 31/32 (96.88%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFGIII 1985
            AA+MSA+YEENKDEDGFLYMTYSGENTFG+ +
Sbjct:   89 AALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.228e-22
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNN 1773
            +YLVPADLTVGQFVYVVRKRIKLS EKAIF+FV N
Sbjct:   49 KYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKN 83          

HSP 2 Score: 63.929 bits (154), Expect = 2.228e-22
Identity = 27/31 (87.10%), Postives = 31/31 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFGII 1982
            AAMMSA+Y+ENKDEDGFLYMTYSGENTFG++
Sbjct:   89 AAMMSAIYDENKDEDGFLYMTYSGENTFGLV 119          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8_GIBZE (Autophagy-related protein 8 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) OX=229533 GN=ATG8 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.633e-21
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNNI 1776
            +YLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV+ +
Sbjct:   48 KYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEV 83          

HSP 2 Score: 57.7658 bits (138), Expect = 1.633e-21
Identity = 24/29 (82.76%), Postives = 29/29 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFG 1976
            AA+MS++YEE+KDEDGFLY+TYSGENTFG
Sbjct:   88 AALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=apg-6 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.701e-21
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 1669 RYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNNI 1776
            +YLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV+ +
Sbjct:   48 KYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEV 83          

HSP 2 Score: 57.7658 bits (138), Expect = 1.701e-21
Identity = 24/29 (82.76%), Postives = 29/29 (100.00%), Query Frame = 3
Query: 1890 AAMMSALYEENKDEDGFLYMTYSGENTFG 1976
            AA+MS++YEE+KDEDGFLY+TYSGENTFG
Sbjct:   88 AALMSSIYEEHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01345 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ATG8B_ORYSJ1.612e-2394.29Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI1.612e-2394.29Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8D_ARATH4.586e-2394.44Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8A_ORYSJ1.172e-2291.43Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI1.172e-2291.43Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8C_ORYSJ1.551e-2291.43Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI1.551e-2291.43Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ARATH2.228e-2288.57Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8_GIBZE1.633e-2186.11Autophagy-related protein 8 OS=Gibberella zeae (st... [more]
ATG8_NEUCR1.701e-2186.11Autophagy-related protein 8 OS=Neurospora crassa (... [more]
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..121
e-value: 7.5E-58
score: 195.7
NoneNo IPR availableCDDcd16128Ubl_ATG8coord: 17..118
e-value: 8.97632E-71
score: 205.002
IPR004241Autophagy protein Atg8 ubiquitin-likePFAMPF02991Atg8coord: 18..121
e-value: 3.7E-52
score: 174.9
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 14..121

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_01345_La_Tanjil_v1.0 ID=rna-TanjilR_01345_La_Tanjil_v1.0; Name=rna-TanjilR_01345; organism=Lupinus angustifolius; type=mRNA; length=1988bp
ATGGCTAAGAGTTCTTTCAAGCTCCAACACCCTCTTGGTTCGTTTACTCT
TCTTTTTATTTCTCCAATTTCTCTTTTCGATAATTCATAGATTATCAAAT
CATAGTTAATCATACTCTAGGCCATTTTAATTTTGTGGAATTGGGAATTG
GTGGTTTAGTTATTGATGCATGATTTATAACATTGTGTTTTCTTCATGAA
GTTTAGTTATTGATTTGTAACGTTGTGTTTATCACAATTTGACAATATAA
AACTTTGGTTTTCTCCAAGCATCATATCCAAGTGCAAATAAACTCATTTT
CTTGTATATATTACTATATTGGACTTATGTTCTATGATTTGTGCAAAGTT
GATGTGGTAGAGAGGAGGCAGGTTGAAGCTGCTCGTATAAGGGAAAAGTA
TCCTGATAGAATTCCAGTAAGATTTGTGTCCTGTTCTGTACATATATCGG
AACCACATCTTCTGTCCCAAAATATTGTGTCACTCCATGTGCCATGAGTT
ATTATTGGTCAAAAAAATACTTAATAATTAAATTTTTAACTTAAATATAT
TTTTTAACCAATCATAACTCATAATATGTAGTGAGACATGGGAAAGAAGA
TGTGCTCTCACATATATAATGATGGTATCACTTCTTGATTATTAATTTTC
TTTTCATCTTTTGTGTGTAGGTAATTGTTGAAAAGGCTGAGAAGAGTGAT
GTTCCTGAAATTGATAAGAAAAAGTAAGTTTTTTTCTAGTTTTTGCAAAT
AGCAAGTATAATAAGTATAGTTGTAGTTTATGAAATCTGGTTTTCTTCTC
AAGTATTGTTACCTATGTTATTTTACGATGAAGCTTATTAGCATTTATTT
TTGCTTGAGAGATTGCAAGCATACTTAATTTGGGGTTGAGGTGTTACCTG
TTCTGAAGACTGATAAAATTTGGTTGCTTTTCCATGAATTTTTTGGCATG
AAATTGAAATGTTCGGGGATAGAAGTTAGACAAATAAGCTGTTGATTAAT
TTTTAATATGATGAACAGAGGAAGAAGCTTTGTCTTCGGTTCTTTGGTTA
ACAATAGTAGTGAGTAGAAAAACCCAATTACGATCTGAATTGGAAAAAAC
AAGGTTCAATGCTATGCTGATTTATACCGGTATATGTCTGTCGTTGTTCT
ATTGATGTGAAATCCTACTAATAGATTTCTACATTGCTTCAGTTATACCA
TTTGAAGGTAAGAGAGTGGCGAAATCTGGGATGTTGTAAGTATGGATTCG
AATTATGTGTATCCTCAGTCTCATTTCTGAGTGGATTACAATTTTACATA
TGCTTATTATTTCTTCTCCAACAGCCTTTTGGTTCAGTTTCACAGCTTTC
ACTATAAATATAAGAGGTTGGATGACCAAAAATTAAAATGGTTTTAAAAA
GTGATCTTTGAATATGGAGAAAGTAAGCAACGAAAGGGACCCCAGAAGCC
GGTTCTTTAGTAGATATGGGCATATTTTAGGAAGCCTTATGTTTAAATTT
GCCTTTGAAATGATAATTTTAGATGCATTAAATTCTTATTCTACTCAAAA
TATGGACACTAGTCAGAATATTCTACCGTGTATTACAAATTCTAGATACT
AATTTTCTTCATTCATGACGATGCTTTTTTCTCCCGTTCATTTATATTGT
TCCGTGTTGTATGATTATAGGTATCTGGTTCCTGCTGATCTGACTGTTGG
CCAGTTCGTTTACGTGGTGAGAAAGCGAATCAAACTGAGTCCTGAGAAGG
CCATCTTCATCTTTGTCAATAACATTTTACCGCCAACAGGTAATACACAT
GGATTACTTTTGTTATTATCATTGCTGCTTCATAGTATTTAACATTGTAG
TTAATTTTGTGAACTGAGTATTGGGTTTCTGTTTATGCAGCGGCTATGAT
GTCGGCACTATATGAGGAAAACAAGGACGAGGATGGATTCCTGTATATGA
CTTACAGCGGGGAGAACACATTTGGGATCATCATATGA
back to top

protein sequence of rna-TanjilR_01345_La_Tanjil_v1.0

>rna-TanjilR_01345_La_Tanjil_v1.0 ID=rna-TanjilR_01345_La_Tanjil_v1.0; Name=rna-TanjilR_01345_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=124bp
MAKSSFKLQHPLVDVVERRQVEAARIREKYPDRIPVIVEKAEKSDVPEID
KKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVNNILPPTAAMMSALY
EENKDEDGFLYMTYSGENTFGIII
back to top

mRNA from alignment at Chr_LG06-CM007366.1:29864012..29865999-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_01345_La_Tanjil_v1.0 ID=rna-TanjilR_01345_La_Tanjil_v1.0; Name=rna-TanjilR_01345; organism=Lupinus angustifolius; type=mRNA; length=1988bp; location=Sequence derived from: Chr_LG06-CM007366.1:29864012..29865999- (Lupinus angustifolius
ATGGCTAAGAGTTCTTTCAAGCTCCAACACCCTCTTGGTTCGTTTACTCT TCTTTTTATTTCTCCAATTTCTCTTTTCGATAATTCATAGATTATCAAAT CATAGTTAATCATACTCTAGGCCATTTTAATTTTGTGGAATTGGGAATTG GTGGTTTAGTTATTGATGCATGATTTATAACATTGTGTTTTCTTCATGAA GTTTAGTTATTGATTTGTAACGTTGTGTTTATCACAATTTGACAATATAA AACTTTGGTTTTCTCCAAGCATCATATCCAAGTGCAAATAAACTCATTTT CTTGTATATATTACTATATTGGACTTATGTTCTATGATTTGTGCAAAGTT GATGTGGTAGAGAGGAGGCAGGTTGAAGCTGCTCGTATAAGGGAAAAGTA TCCTGATAGAATTCCAGTAAGATTTGTGTCCTGTTCTGTACATATATCGG AACCACATCTTCTGTCCCAAAATATTGTGTCACTCCATGTGCCATGAGTT ATTATTGGTCAAAAAAATACTTAATAATTAAATTTTTAACTTAAATATAT TTTTTAACCAATCATAACTCATAATATGTAGTGAGACATGGGAAAGAAGA TGTGCTCTCACATATATAATGATGGTATCACTTCTTGATTATTAATTTTC TTTTCATCTTTTGTGTGTAGGTAATTGTTGAAAAGGCTGAGAAGAGTGAT GTTCCTGAAATTGATAAGAAAAAGTAAGTTTTTTTCTAGTTTTTGCAAAT AGCAAGTATAATAAGTATAGTTGTAGTTTATGAAATCTGGTTTTCTTCTC AAGTATTGTTACCTATGTTATTTTACGATGAAGCTTATTAGCATTTATTT TTGCTTGAGAGATTGCAAGCATACTTAATTTGGGGTTGAGGTGTTACCTG TTCTGAAGACTGATAAAATTTGGTTGCTTTTCCATGAATTTTTTGGCATG AAATTGAAATGTTCGGGGATAGAAGTTAGACAAATAAGCTGTTGATTAAT TTTTAATATGATGAACAGAGGAAGAAGCTTTGTCTTCGGTTCTTTGGTTA ACAATAGTAGTGAGTAGAAAAACCCAATTACGATCTGAATTGGAAAAAAC AAGGTTCAATGCTATGCTGATTTATACCGGTATATGTCTGTCGTTGTTCT ATTGATGTGAAATCCTACTAATAGATTTCTACATTGCTTCAGTTATACCA TTTGAAGGTAAGAGAGTGGCGAAATCTGGGATGTTGTAAGTATGGATTCG AATTATGTGTATCCTCAGTCTCATTTCTGAGTGGATTACAATTTTACATA TGCTTATTATTTCTTCTCCAACAGCCTTTTGGTTCAGTTTCACAGCTTTC ACTATAAATATAAGAGGTTGGATGACCAAAAATTAAAATGGTTTTAAAAA GTGATCTTTGAATATGGAGAAAGTAAGCAACGAAAGGGACCCCAGAAGCC GGTTCTTTAGTAGATATGGGCATATTTTAGGAAGCCTTATGTTTAAATTT GCCTTTGAAATGATAATTTTAGATGCATTAAATTCTTATTCTACTCAAAA TATGGACACTAGTCAGAATATTCTACCGTGTATTACAAATTCTAGATACT AATTTTCTTCATTCATGACGATGCTTTTTTCTCCCGTTCATTTATATTGT TCCGTGTTGTATGATTATAGGTATCTGGTTCCTGCTGATCTGACTGTTGG CCAGTTCGTTTACGTGGTGAGAAAGCGAATCAAACTGAGTCCTGAGAAGG CCATCTTCATCTTTGTCAATAACATTTTACCGCCAACAGGTAATACACAT GGATTACTTTTGTTATTATCATTGCTGCTTCATAGTATTTAACATTGTAG TTAATTTTGTGAACTGAGTATTGGGTTTCTGTTTATGCAGCGGCTATGAT GTCGGCACTATATGAGGAAAACAAGGACGAGGATGGATTCCTGTATATGA CTTACAGCGGGGAGAACACATTTGGGATCATCATATGA
back to top

Coding sequence (CDS) from alignment at Chr_LG06-CM007366.1:29864012..29865999-

>rna-TanjilR_01345_La_Tanjil_v1.0 ID=rna-TanjilR_01345_La_Tanjil_v1.0; Name=rna-TanjilR_01345; organism=Lupinus angustifolius; type=CDS; length=375bp; location=Sequence derived from: Chr_LG06-CM007366.1:29864012..29865999- (Lupinus angustifolius
ATGGCTAAGAGTTCTTTCAAGCTCCAACACCCTCTTGTTGATGTGGTAGA
GAGGAGGCAGGTTGAAGCTGCTCGTATAAGGGAAAAGTATCCTGATAGAA
TTCCAGTAATTGTTGAAAAGGCTGAGAAGAGTGATGTTCCTGAAATTGAT
AAGAAAAAGTATCTGGTTCCTGCTGATCTGACTGTTGGCCAGTTCGTTTA
CGTGGTGAGAAAGCGAATCAAACTGAGTCCTGAGAAGGCCATCTTCATCT
TTGTCAATAACATTTTACCGCCAACAGCGGCTATGATGTCGGCACTATAT
GAGGAAAACAAGGACGAGGATGGATTCCTGTATATGACTTACAGCGGGGA
GAACACATTTGGGATCATCATATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004241Atg8-like
IPR029071Ubiquitin-like_domsf