rna-TanjilR_26452

Transcript Overview
Namerna-TanjilR_26452
Unique Namerna-TanjilR_26452_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length4213
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG06-CM007366.1supercontigChr_LG06-CM007366.1:30039726..30043938 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL105Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL238Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL528Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR587Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR594Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1099Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1107Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0926Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1090Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR1140Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0830Pisum sativum Cameor genome v1aPisum sativum
anpsR0846Pisum sativum Cameor genome v1aPisum sativum
anpvR1076Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1168Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0931Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0995Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1058Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0931Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0955Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0969Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0944Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0951Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0932Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0887Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0949Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1038Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1052Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0858Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1015Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1084Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0892Cicer arietinum
ancarR0949Cicer arietinum
anccaR0914Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0953Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1137Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1142Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1005Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR1066Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1128Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1143Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1133Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1148Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0894Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1117Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0957Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1200Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014646878.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr05.2158.1.62113177Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_14149Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058923963.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan05g158800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cc_v2.0_23866.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_004487317.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigan.07G086800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
PvulFLAVERTChr05.751Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va05G045680.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.1g056480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat5g265400.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.005G113400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_07G00698.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.07G065400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigun05g225100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_01396.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun05g225100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Tiffany.R1.1g038120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0737800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_03095Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_06521Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_26452gene-TanjilG_26452_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_26452rna-TanjilR_26452_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_26452_La_Tanjil_v1.0rna-TanjilR_26452_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043851..30043938rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043851..30043938Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043586..30043722rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043586..30043722Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043431..30043469rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043431..30043469Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043265..30043357rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043265..30043357Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043050..30043166rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043050..30043166Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30042303..30042449rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30042303..30042449Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30041278..30041325rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30041278..30041325Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040869..30041019rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040869..30041019Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040371..30040536rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040371..30040536Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040064..30040133rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040064..30040133Lupinus angustifoliusCDS
rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30039726..30039986rna-TanjilR_26452_La_Tanjil_v1.0-CDS-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30039726..30039986Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043851..30043938rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043851..30043938Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043586..30043722rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043586..30043722Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043431..30043469rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043431..30043469Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043265..30043357rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043265..30043357Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043050..30043166rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30043050..30043166Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30042303..30042449rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30042303..30042449Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30041278..30041325rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30041278..30041325Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040869..30041019rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040869..30041019Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040371..30040536rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040371..30040536Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040064..30040133rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30040064..30040133Lupinus angustifoliusexon
rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30039726..30039986rna-TanjilR_26452_La_Tanjil_v1.0-exon-Chr_LG06-CM007366.1_La_Tanjil_v1.0-1579734366:30039726..30039986Lupinus angustifoliusexon


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_26452 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004342EXS, C-terminalPFAMPF03124EXScoord: 155..406
e-value: 1.1E-71
score: 241.9
IPR004342EXS, C-terminalPROSITEPS51380EXScoord: 234..434
score: 20.952

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_26452_La_Tanjil_v1.0 ID=rna-TanjilR_26452_La_Tanjil_v1.0; Name=rna-TanjilR_26452; organism=Lupinus angustifolius; type=mRNA; length=4213bp
ATGTTCGGAGGTGCTTCTGTTCCTGCTAGTAATCCTCACTTACGTAAGTC
TGGGAGCAGCAAATTTAAAGCTGTTGTCTCGGATCTTGGTAACTTCATCT
CTTCTATTTTAACATAATAATCTCTTTTATTTTAACATAATAATCACTTA
TATTTTAACTTTTGATTATATGTGTGTTCTATCAATACATCAACCATTTA
TTCCTACTATTCCCAGAGGCATATGATGTTGAAAACGATGCTGAGGATGG
TGTTTTTGGTTCCATGGAAGCAAATGATTCAAGGGGTGGTGGTAGCACAC
CCATGAGTTTCACTGCTATATTGCCCTCGCCCGTTTTGCTGTGGAGATTC
AAGGTTTTTATATTGTTTTAACTTTGAAGAAGCTTTAGGAATTTTCTTGT
AAATTGATCTTCTATTTCTATAATGCATTCTGCTATTTTCATTCATTTTT
TCCTGCTCTACTTGTCCAGGTACTATTGTTCCTTATTTGGGGCTTCATCT
GTTGCAAGGTTAGTAACACTTTCTCTATACAGCATTTCCCTGCAGCTTCA
CAATCTTATTGGCCATATGTGAAAATTGCAGATTGGATGGGATTCTGTCA
TGAGAATGAGTGCAGACAAACGGGGTTTGTTTCTATATGAAGCATTTTTG
TATTTTAACCCTCTTCTTCTTGCGGTTAGTTCTTTCTCCTCTTTTACACA
GCTTATGGTTTTGAAACTTTATTTACATATTTGTTGTATCATTGTGTTAC
ATCTCATTTTTTTATATTTCAGGCTTTGATGGTTTGGCTTTGGGGAATCA
ACTTATGGTTTTTTGCTCAGGCTGGTGTCAATTATGCAAAAATATTTGAT
CATGATCAAAATCATCTGACTCACAGAGAAATATGGAAGGTAATAACTAT
GGTCACTTTTACTATGTCATGTTTGGCACATAGTTATTTTTTATGGTCCT
ATAATCTCTGCCTTAGATTTTGCTAACTTTTCTGTTTATCATTGCAGTGT
GCCACATGGATGACAATTATTGTTCCAACCAGTTTGACAGCATATATTTA
TCTTTATTCTCAAGGAGAAGTCTCATATGCTGCATCACAACCAGTGTAAT
AGATGCATCCACTCTTAATTATGGGTTATTGTATAGTTTTGTCTGCATGG
TTATCACTTTTTCAATTATTACTGTACTATTGTCATTTCTCAACAATACT
TTATTTGATTGCAATGTTTTTTTAATAAATTTTTTTATTTCACTGATAAA
TTATAACAATGAATTATGATAAGCTAAGATGTAAATAAGATATCCAACAC
ACAAGAGTTTATATTTATTTATGTCATCAGTGAAAAATACTTTAGTCAGC
ATATATAACTTTTCATGTAGAAAACAAGTGAAGTTTTGTCCACTGCATTA
TTTATGATGAATTAATGAATATTTAATACCACTTGTGCTCCTTTTGTTTC
TTGTTGAAAGTGTTGAGTTTTCCTTGAATTTTTCTGCAGGTGCTATTGTA
TGCTGGTGTAGTTTTGGTTTTGATATTCCCCTTTGACATCTTTTACCTTT
CTTCTAGATTTTATTTCTTAAGGACACTTGGGCGCATAGTTTTCCCATTA
CAGGCAAGTTTTCTCTTATTTGAGTGTATTATGTTAGTAAGTTCTAGCAC
TTAGGTAAATAATATATATAAGCATGCACATAGAATATCATATACAATGT
AACTTATTCACATACTTCCTCTCTGAGTTCAGTGTTTATAACAACTTCAT
ATGTATCCATGCATCTCCCACTCCCACATTAGTGTTACGTATCCGTTTGC
AAGTTGAGTTTTGAAGGGGGAGAAATAAAGGGAAAAGAATAGTTTCATAG
TCATTTCGTAAATATATTTTATAACTCTCAATTATTCTCTCCGAAAACCA
ACTCGCAAAAAGACCCTTAGATAAAATGGTTGCATTGCAGACATAAAGGT
AAAATAAAATAAAAACTACGTGCTGACCCAAAATCAAAATCATTGTACTT
TATATGCAACCATGCTTGATTATTAATCCTATTTTTTTGTATTTTCTTGA
AACCAGGCAATATCATTCTCCGATTTTTTCTTGGCTGATATTTTAACTTC
AATGCCCAAGGTCTGATTCCTTTCAGTATTATCTTTCTCTAGAATGATAT
TTGTTGTATTCCATGTTAGTCTTTAGTTGTTTAAGATTGACTTTTACATA
ATAGGTTTTTAACCTAAACTACATGTTTATTTATAGATATGAAGCTATAT
ACTTTTGCATGCATTTAAATTGTTTGTTATTACAAAAAACTGAAAGAAAC
CTTCCTAGTAAAAGTTGGAAATCATATCCTACCGTAAGTTACTTTGAGTT
AATCATATAATACAATAAGCAGAAATGGAGGGAGATATAAATATATGATT
CAAAGAGGTAGATGAAATAGTGAAGTACTTTAGGTGTCATATGCTATGTG
TTTATACTGAGTTTCAACTTTCAACACTGACATGCAAAACCTTATAGTTT
AGACTTTAGAATTGATATAATTTGGTGATTTAAATGTTGGTTTTTTAACT
TCCTAGTGATGTACTACTATAATAATATTATATGGTGATTATGATTGCAA
TTTATATATGCAGGTGTTTTCTGATTTGGAGCGTTCTGTCTGTAGAATGG
TTCATAGACAGGTTTGGTTCTGAAAATTTTATGTATTTTAGTTACTAGTT
TTTCTAGCTTCCTGTTCTGGTTGTTATATAAAAGTGGGTTTAGCACCACA
TTTTGACCGAAAACCTTAAGGTATTAAGGTTTATCGGTCCATCCACTTAT
ATGTTTTTTAACTTATACATTTTTACATAATGTAAGATTTCTTCATTAAC
ACTTGGAATATCCAACACATTCGATATATCGACATTTTATAAATAAATAA
ATAAAAAACTGTTTTGTAGGTTGCAACAATTGATTGGTTAGAAGCTGATT
CAGTTTGTGGTAGTCACTCAGTGGCAATTCCTTTAGTTCTTGTTTTACCT
TACATTTTCCGTTTAAATCAATGTCTCCGACAATACAAAGATAGTGGAGA
CAAAACTTCTCTTCTCAATGGTAACACCTTTTCCTTTAAGAACTTGTATC
AGTTACTCATGCAAACTAGTTAAGAATCTGACTAGTCATGTTCAATTTTT
AAGGCCACTTTTGTTTACAATTATACCTGAGTTTTATACATTGTCTTACA
TCATCCACCATTCATATTTAATCATCACTAACTATTCAAAAAAAGTTGTA
CAAATGATTGGTATATGATATAATGAATGTGTATAAATCTTTAGGCTGAC
AAATATTACACTCAATTAGATTAAATTATTGAGTCATATTTTCTTTACCA
AATGATATTACTGCTTAATAATGATATTATTTTCCTTTGATTATGGTTTC
AGCTTTAAAATATTCAACAGCAGTGCCAGTGATTTTTCTTTCTGCCCTTA
AGTATCACATCTTCCCTGATAAGTGGACAAACTTTTATAGGCCTCTATGG
CTTCTTTCAAGTGTTATAAACTCATTATACTCTTTCTACTGGGATGTGAA
TAGAGATTGGGACCTAAGGTATGCCAAAAATGTTTGTCCTACTATACCAA
ACACATTTAATGGTATCTTTGAAACATAGCTTTTTTCTAAATGCAGACAT
GTAGATTCTACTGTCAAGAGTGATTTTATAACTTAGCCAAGAACTTAAAG
GCAGAAAATTTTGGTTTTATTGACATTATCAGTGAGGATGTTATTTCTGT
TGTAAGATTATGAATGTCTTGTAACATGTGATAAGATTTCTTTCTATTTC
CGCAGCAGCTTCACTCGAATATTCAAGTTCAGCAAGCCGCATCGACTTTC
GCATCTGTTACATGGAAGGAGATGGGTAAGGATTGTTATGGGAACAACTT
GAGAAAAGACTACTACTAGATCAAAAAATAAAACAACAGATTGTGATTGC
AGGTTTATTTTTGGGTGATTGGGAGTAATCTGGTTTTGCGCTGCACTTGG
ACATACAAGTTATCTTCCCATCTTCGCCATAATTATCGCACGGTGTTCAC
AATCGCTGCCTTGGAGATTTTCCGCCGCTTCCAATGGATCTTTTTTCGCG
TAGAAAATGAGTGGAACAAGATGAATTCCAAATCACACATTCAGCTCTCA
GGAGATGAAATGTCAAATGAAGAAGAGAAGTTACTTGATTACAGTAACAA
CCACAGTGTATAG
back to top

protein sequence of rna-TanjilR_26452_La_Tanjil_v1.0

>rna-TanjilR_26452_La_Tanjil_v1.0 ID=rna-TanjilR_26452_La_Tanjil_v1.0; Name=rna-TanjilR_26452_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=438bp
MFGGASVPASNPHLRKSGSSKFKAVVSDLEAYDVENDAEDGVFGSMEAND
SRGGGSTPMSFTAILPSPVLLWRFKVLLFLIWGFICCKIGWDSVMRMSAD
KRGLFLYEAFLYFNPLLLAALMVWLWGINLWFFAQAGVNYAKIFDHDQNH
LTHREIWKVLLYAGVVLVLIFPFDIFYLSSRFYFLRTLGRIVFPLQASFL
LFECIMLVFSDLERSVCRMVHRQVATIDWLEADSVCGSHSVAIPLVLVLP
YIFRLNQCLRQYKDSGDKTSLLNALKYSTAVPVIFLSALKYHIFPDKWTN
FYRPLWLLSSVINSLYSFYWDVNRDWDLSSFTRIFKFSKPHRLSHLLHGR
RWVYFWVIGSNLVLRCTWTYKLSSHLRHNYRTVFTIAALEIFRRFQWIFF
RVENEWNKMNSKSHIQLSGDEMSNEEEKLLDYSNNHSV
back to top

mRNA from alignment at Chr_LG06-CM007366.1:30039726..30043938-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_26452_La_Tanjil_v1.0 ID=rna-TanjilR_26452_La_Tanjil_v1.0; Name=rna-TanjilR_26452; organism=Lupinus angustifolius; type=mRNA; length=4213bp; location=Sequence derived from: Chr_LG06-CM007366.1:30039726..30043938- (Lupinus angustifolius
ATGTTCGGAGGTGCTTCTGTTCCTGCTAGTAATCCTCACTTACGTAAGTC
TGGGAGCAGCAAATTTAAAGCTGTTGTCTCGGATCTTGGTAACTTCATCT
CTTCTATTTTAACATAATAATCTCTTTTATTTTAACATAATAATCACTTA
TATTTTAACTTTTGATTATATGTGTGTTCTATCAATACATCAACCATTTA
TTCCTACTATTCCCAGAGGCATATGATGTTGAAAACGATGCTGAGGATGG
TGTTTTTGGTTCCATGGAAGCAAATGATTCAAGGGGTGGTGGTAGCACAC
CCATGAGTTTCACTGCTATATTGCCCTCGCCCGTTTTGCTGTGGAGATTC
AAGGTTTTTATATTGTTTTAACTTTGAAGAAGCTTTAGGAATTTTCTTGT
AAATTGATCTTCTATTTCTATAATGCATTCTGCTATTTTCATTCATTTTT
TCCTGCTCTACTTGTCCAGGTACTATTGTTCCTTATTTGGGGCTTCATCT
GTTGCAAGGTTAGTAACACTTTCTCTATACAGCATTTCCCTGCAGCTTCA
CAATCTTATTGGCCATATGTGAAAATTGCAGATTGGATGGGATTCTGTCA
TGAGAATGAGTGCAGACAAACGGGGTTTGTTTCTATATGAAGCATTTTTG
TATTTTAACCCTCTTCTTCTTGCGGTTAGTTCTTTCTCCTCTTTTACACA
GCTTATGGTTTTGAAACTTTATTTACATATTTGTTGTATCATTGTGTTAC
ATCTCATTTTTTTATATTTCAGGCTTTGATGGTTTGGCTTTGGGGAATCA
ACTTATGGTTTTTTGCTCAGGCTGGTGTCAATTATGCAAAAATATTTGAT
CATGATCAAAATCATCTGACTCACAGAGAAATATGGAAGGTAATAACTAT
GGTCACTTTTACTATGTCATGTTTGGCACATAGTTATTTTTTATGGTCCT
ATAATCTCTGCCTTAGATTTTGCTAACTTTTCTGTTTATCATTGCAGTGT
GCCACATGGATGACAATTATTGTTCCAACCAGTTTGACAGCATATATTTA
TCTTTATTCTCAAGGAGAAGTCTCATATGCTGCATCACAACCAGTGTAAT
AGATGCATCCACTCTTAATTATGGGTTATTGTATAGTTTTGTCTGCATGG
TTATCACTTTTTCAATTATTACTGTACTATTGTCATTTCTCAACAATACT
TTATTTGATTGCAATGTTTTTTTAATAAATTTTTTTATTTCACTGATAAA
TTATAACAATGAATTATGATAAGCTAAGATGTAAATAAGATATCCAACAC
ACAAGAGTTTATATTTATTTATGTCATCAGTGAAAAATACTTTAGTCAGC
ATATATAACTTTTCATGTAGAAAACAAGTGAAGTTTTGTCCACTGCATTA
TTTATGATGAATTAATGAATATTTAATACCACTTGTGCTCCTTTTGTTTC
TTGTTGAAAGTGTTGAGTTTTCCTTGAATTTTTCTGCAGGTGCTATTGTA
TGCTGGTGTAGTTTTGGTTTTGATATTCCCCTTTGACATCTTTTACCTTT
CTTCTAGATTTTATTTCTTAAGGACACTTGGGCGCATAGTTTTCCCATTA
CAGGCAAGTTTTCTCTTATTTGAGTGTATTATGTTAGTAAGTTCTAGCAC
TTAGGTAAATAATATATATAAGCATGCACATAGAATATCATATACAATGT
AACTTATTCACATACTTCCTCTCTGAGTTCAGTGTTTATAACAACTTCAT
ATGTATCCATGCATCTCCCACTCCCACATTAGTGTTACGTATCCGTTTGC
AAGTTGAGTTTTGAAGGGGGAGAAATAAAGGGAAAAGAATAGTTTCATAG
TCATTTCGTAAATATATTTTATAACTCTCAATTATTCTCTCCGAAAACCA
ACTCGCAAAAAGACCCTTAGATAAAATGGTTGCATTGCAGACATAAAGGT
AAAATAAAATAAAAACTACGTGCTGACCCAAAATCAAAATCATTGTACTT
TATATGCAACCATGCTTGATTATTAATCCTATTTTTTTGTATTTTCTTGA
AACCAGGCAATATCATTCTCCGATTTTTTCTTGGCTGATATTTTAACTTC
AATGCCCAAGGTCTGATTCCTTTCAGTATTATCTTTCTCTAGAATGATAT
TTGTTGTATTCCATGTTAGTCTTTAGTTGTTTAAGATTGACTTTTACATA
ATAGGTTTTTAACCTAAACTACATGTTTATTTATAGATATGAAGCTATAT
ACTTTTGCATGCATTTAAATTGTTTGTTATTACAAAAAACTGAAAGAAAC
CTTCCTAGTAAAAGTTGGAAATCATATCCTACCGTAAGTTACTTTGAGTT
AATCATATAATACAATAAGCAGAAATGGAGGGAGATATAAATATATGATT
CAAAGAGGTAGATGAAATAGTGAAGTACTTTAGGTGTCATATGCTATGTG
TTTATACTGAGTTTCAACTTTCAACACTGACATGCAAAACCTTATAGTTT
AGACTTTAGAATTGATATAATTTGGTGATTTAAATGTTGGTTTTTTAACT
TCCTAGTGATGTACTACTATAATAATATTATATGGTGATTATGATTGCAA
TTTATATATGCAGGTGTTTTCTGATTTGGAGCGTTCTGTCTGTAGAATGG
TTCATAGACAGGTTTGGTTCTGAAAATTTTATGTATTTTAGTTACTAGTT
TTTCTAGCTTCCTGTTCTGGTTGTTATATAAAAGTGGGTTTAGCACCACA
TTTTGACCGAAAACCTTAAGGTATTAAGGTTTATCGGTCCATCCACTTAT
ATGTTTTTTAACTTATACATTTTTACATAATGTAAGATTTCTTCATTAAC
ACTTGGAATATCCAACACATTCGATATATCGACATTTTATAAATAAATAA
ATAAAAAACTGTTTTGTAGGTTGCAACAATTGATTGGTTAGAAGCTGATT
CAGTTTGTGGTAGTCACTCAGTGGCAATTCCTTTAGTTCTTGTTTTACCT
TACATTTTCCGTTTAAATCAATGTCTCCGACAATACAAAGATAGTGGAGA
CAAAACTTCTCTTCTCAATGGTAACACCTTTTCCTTTAAGAACTTGTATC
AGTTACTCATGCAAACTAGTTAAGAATCTGACTAGTCATGTTCAATTTTT
AAGGCCACTTTTGTTTACAATTATACCTGAGTTTTATACATTGTCTTACA
TCATCCACCATTCATATTTAATCATCACTAACTATTCAAAAAAAGTTGTA
CAAATGATTGGTATATGATATAATGAATGTGTATAAATCTTTAGGCTGAC
AAATATTACACTCAATTAGATTAAATTATTGAGTCATATTTTCTTTACCA
AATGATATTACTGCTTAATAATGATATTATTTTCCTTTGATTATGGTTTC
AGCTTTAAAATATTCAACAGCAGTGCCAGTGATTTTTCTTTCTGCCCTTA
AGTATCACATCTTCCCTGATAAGTGGACAAACTTTTATAGGCCTCTATGG
CTTCTTTCAAGTGTTATAAACTCATTATACTCTTTCTACTGGGATGTGAA
TAGAGATTGGGACCTAAGGTATGCCAAAAATGTTTGTCCTACTATACCAA
ACACATTTAATGGTATCTTTGAAACATAGCTTTTTTCTAAATGCAGACAT
GTAGATTCTACTGTCAAGAGTGATTTTATAACTTAGCCAAGAACTTAAAG
GCAGAAAATTTTGGTTTTATTGACATTATCAGTGAGGATGTTATTTCTGT
TGTAAGATTATGAATGTCTTGTAACATGTGATAAGATTTCTTTCTATTTC
CGCAGCAGCTTCACTCGAATATTCAAGTTCAGCAAGCCGCATCGACTTTC
GCATCTGTTACATGGAAGGAGATGGGTAAGGATTGTTATGGGAACAACTT
GAGAAAAGACTACTACTAGATCAAAAAATAAAACAACAGATTGTGATTGC
AGGTTTATTTTTGGGTGATTGGGAGTAATCTGGTTTTGCGCTGCACTTGG
ACATACAAGTTATCTTCCCATCTTCGCCATAATTATCGCACGGTGTTCAC
AATCGCTGCCTTGGAGATTTTCCGCCGCTTCCAATGGATCTTTTTTCGCG
TAGAAAATGAGTGGAACAAGATGAATTCCAAATCACACATTCAGCTCTCA
GGAGATGAAATGTCAAATGAAGAAGAGAAGTTACTTGATTACAGTAACAA
CCACAGTGTATAG
back to top

Coding sequence (CDS) from alignment at Chr_LG06-CM007366.1:30039726..30043938-

>rna-TanjilR_26452_La_Tanjil_v1.0 ID=rna-TanjilR_26452_La_Tanjil_v1.0; Name=rna-TanjilR_26452; organism=Lupinus angustifolius; type=CDS; length=1317bp; location=Sequence derived from: Chr_LG06-CM007366.1:30039726..30043938- (Lupinus angustifolius
ATGTTCGGAGGTGCTTCTGTTCCTGCTAGTAATCCTCACTTACGTAAGTC
TGGGAGCAGCAAATTTAAAGCTGTTGTCTCGGATCTTGAGGCATATGATG
TTGAAAACGATGCTGAGGATGGTGTTTTTGGTTCCATGGAAGCAAATGAT
TCAAGGGGTGGTGGTAGCACACCCATGAGTTTCACTGCTATATTGCCCTC
GCCCGTTTTGCTGTGGAGATTCAAGGTACTATTGTTCCTTATTTGGGGCT
TCATCTGTTGCAAGATTGGATGGGATTCTGTCATGAGAATGAGTGCAGAC
AAACGGGGTTTGTTTCTATATGAAGCATTTTTGTATTTTAACCCTCTTCT
TCTTGCGGCTTTGATGGTTTGGCTTTGGGGAATCAACTTATGGTTTTTTG
CTCAGGCTGGTGTCAATTATGCAAAAATATTTGATCATGATCAAAATCAT
CTGACTCACAGAGAAATATGGAAGGTGCTATTGTATGCTGGTGTAGTTTT
GGTTTTGATATTCCCCTTTGACATCTTTTACCTTTCTTCTAGATTTTATT
TCTTAAGGACACTTGGGCGCATAGTTTTCCCATTACAGGCAAGTTTTCTC
TTATTTGAGTGTATTATGTTAGTGTTTTCTGATTTGGAGCGTTCTGTCTG
TAGAATGGTTCATAGACAGGTTGCAACAATTGATTGGTTAGAAGCTGATT
CAGTTTGTGGTAGTCACTCAGTGGCAATTCCTTTAGTTCTTGTTTTACCT
TACATTTTCCGTTTAAATCAATGTCTCCGACAATACAAAGATAGTGGAGA
CAAAACTTCTCTTCTCAATGCTTTAAAATATTCAACAGCAGTGCCAGTGA
TTTTTCTTTCTGCCCTTAAGTATCACATCTTCCCTGATAAGTGGACAAAC
TTTTATAGGCCTCTATGGCTTCTTTCAAGTGTTATAAACTCATTATACTC
TTTCTACTGGGATGTGAATAGAGATTGGGACCTAAGCAGCTTCACTCGAA
TATTCAAGTTCAGCAAGCCGCATCGACTTTCGCATCTGTTACATGGAAGG
AGATGGGTTTATTTTTGGGTGATTGGGAGTAATCTGGTTTTGCGCTGCAC
TTGGACATACAAGTTATCTTCCCATCTTCGCCATAATTATCGCACGGTGT
TCACAATCGCTGCCTTGGAGATTTTCCGCCGCTTCCAATGGATCTTTTTT
CGCGTAGAAAATGAGTGGAACAAGATGAATTCCAAATCACACATTCAGCT
CTCAGGAGATGAAATGTCAAATGAAGAAGAGAAGTTACTTGATTACAGTA
ACAACCACAGTGTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004342EXS_C
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane