rna-TanjilR_07713

Transcript Overview
Namerna-TanjilR_07713
Unique Namerna-TanjilR_07713_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1094
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG07-CM007367.1supercontigChr_LG07-CM007367.1:14727997..14729090 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL176Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL244Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvR1196Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1237Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1245Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1071Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anzwsR1014Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvrvR1047Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1021Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ancanR0955Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0964Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1143Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1153Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1009Cicer arietinum
ancarR1022Cicer arietinum
anccaR1018Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1152Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1154Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1176Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1105Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR1164Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1178Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1199Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1201Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1214Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1216Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anpvfR1233Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1272Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
XM_058868310.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_07713gene-TanjilG_07713_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07713rna-TanjilR_07713_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_07713_La_Tanjil_v1.0rna-TanjilR_07713_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07713_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14728761..14729090rna-TanjilR_07713_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14728761..14729090Lupinus angustifoliusCDS
rna-TanjilR_07713_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14727997..14728053rna-TanjilR_07713_La_Tanjil_v1.0-CDS-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14727997..14728053Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_07713_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14728761..14729090rna-TanjilR_07713_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14728761..14729090Lupinus angustifoliusexon
rna-TanjilR_07713_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14727997..14728053rna-TanjilR_07713_La_Tanjil_v1.0-exon-Chr_LG07-CM007367.1_La_Tanjil_v1.0-1579734366:14727997..14728053Lupinus angustifoliusexon


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_07713 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..66

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_07713_La_Tanjil_v1.0 ID=rna-TanjilR_07713_La_Tanjil_v1.0; Name=rna-TanjilR_07713; organism=Lupinus angustifolius; type=mRNA; length=1094bp
ATGGAAGCATGCTCTACATTCCATCCTAAACCTCAACCTTGTCCATGGCG
ACCAACCCTTTTCAACCCAAAACCCATTTCCCATTATCGCATCTCTTGCT
CCAACAACAACAACAACAATATCCCACGTTGGGATTCCAATGCTGAAACC
TCTTCACCCAGAAATTTCAGCTTCAACAATTTCAAAGCCAAACGTCCTCC
TCAGCAAGACCAACAAGAAGAATTCGGAAAGAAGAGACGGTGGTGGTCTG
ATGAAGCTGAATCTCCGTCGTTTGAGGAAGAAACTAGTGGGGGTTGGGAG
GAAGTTATAGATTCTCTCTGGATTTTCAAGGTAATTTGTCTCTTTCGTTT
CTGTAGTTAACTTCAAGTGTGTCAAATTTGTTTTTTTTAACTATGCCCTT
TATTTTAATACAAGTCCAATGACAAGGTTTTGGTTAATAACAATAGATCA
CGGGTTCAAGTAAATTGTATGAGAAGTTGGGTTCGTTTATGAGTTGAGTT
TTGGATGAGAGAAATGAAAAAAAACTTTAAAATCATTTCATTTATGACTC
TTCAACCTTTCATTTCTCTTTCTCCCCCTCCACAACTTAATTCGCAAAAG
GACTCATACCCTACCAGACTCCACTAGGTGAGAGTAATAGACCACCTTTT
TTATGATAAGGAGTTAAAATGGGATAAAGATGGGTTGAAAAACTAAATCC
ATGGAAATATTAAACATGTCTTTTCCCAATACAAAGTTACTTTTGAATTC
CTTATCCTAGGCCCTTAAAATTTCCCTTAGTTTAGTGTGGAAGACGAATA
AACTGTTTATGGCATTTGGTTTTATTAATTTATTTATTTTGGACTTGTGG
ATGTAGGTGGTAATATATTGAAAGATGAGTATTTGATTACTACGTGCCTC
ACTATTTAAGATTAGTTTCTCTTCTACGTGAGGCTTCTAATGATAGTTTA
AGCTTTTTTCTCTGTGTCTGACATAAAGCAAAGTGATTGTTTATAAAATT
GGCAGACCAATTATTTTCAATGGAATCTTTGTTGAAGGCATCTCTTGAGC
AATCAAGCAAAAGCAACGCACCTGGCCAGCATTGTCTCGGCTAA
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protein sequence of rna-TanjilR_07713_La_Tanjil_v1.0

>rna-TanjilR_07713_La_Tanjil_v1.0 ID=rna-TanjilR_07713_La_Tanjil_v1.0; Name=rna-TanjilR_07713_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=128bp
MEACSTFHPKPQPCPWRPTLFNPKPISHYRISCSNNNNNNIPRWDSNAET
SSPRNFSFNNFKAKRPPQQDQQEEFGKKRRWWSDEAESPSFEEETSGGWE
EVIDSLWIFKASLEQSSKSNAPGQHCLG
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mRNA from alignment at Chr_LG07-CM007367.1:14727997..14729090-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_07713_La_Tanjil_v1.0 ID=rna-TanjilR_07713_La_Tanjil_v1.0; Name=rna-TanjilR_07713; organism=Lupinus angustifolius; type=mRNA; length=1094bp; location=Sequence derived from: Chr_LG07-CM007367.1:14727997..14729090- (Lupinus angustifolius
ATGGAAGCATGCTCTACATTCCATCCTAAACCTCAACCTTGTCCATGGCG
ACCAACCCTTTTCAACCCAAAACCCATTTCCCATTATCGCATCTCTTGCT
CCAACAACAACAACAACAATATCCCACGTTGGGATTCCAATGCTGAAACC
TCTTCACCCAGAAATTTCAGCTTCAACAATTTCAAAGCCAAACGTCCTCC
TCAGCAAGACCAACAAGAAGAATTCGGAAAGAAGAGACGGTGGTGGTCTG
ATGAAGCTGAATCTCCGTCGTTTGAGGAAGAAACTAGTGGGGGTTGGGAG
GAAGTTATAGATTCTCTCTGGATTTTCAAGGTAATTTGTCTCTTTCGTTT
CTGTAGTTAACTTCAAGTGTGTCAAATTTGTTTTTTTTAACTATGCCCTT
TATTTTAATACAAGTCCAATGACAAGGTTTTGGTTAATAACAATAGATCA
CGGGTTCAAGTAAATTGTATGAGAAGTTGGGTTCGTTTATGAGTTGAGTT
TTGGATGAGAGAAATGAAAAAAAACTTTAAAATCATTTCATTTATGACTC
TTCAACCTTTCATTTCTCTTTCTCCCCCTCCACAACTTAATTCGCAAAAG
GACTCATACCCTACCAGACTCCACTAGGTGAGAGTAATAGACCACCTTTT
TTATGATAAGGAGTTAAAATGGGATAAAGATGGGTTGAAAAACTAAATCC
ATGGAAATATTAAACATGTCTTTTCCCAATACAAAGTTACTTTTGAATTC
CTTATCCTAGGCCCTTAAAATTTCCCTTAGTTTAGTGTGGAAGACGAATA
AACTGTTTATGGCATTTGGTTTTATTAATTTATTTATTTTGGACTTGTGG
ATGTAGGTGGTAATATATTGAAAGATGAGTATTTGATTACTACGTGCCTC
ACTATTTAAGATTAGTTTCTCTTCTACGTGAGGCTTCTAATGATAGTTTA
AGCTTTTTTCTCTGTGTCTGACATAAAGCAAAGTGATTGTTTATAAAATT
GGCAGACCAATTATTTTCAATGGAATCTTTGTTGAAGGCATCTCTTGAGC
AATCAAGCAAAAGCAACGCACCTGGCCAGCATTGTCTCGGCTAA
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Coding sequence (CDS) from alignment at Chr_LG07-CM007367.1:14727997..14729090-

>rna-TanjilR_07713_La_Tanjil_v1.0 ID=rna-TanjilR_07713_La_Tanjil_v1.0; Name=rna-TanjilR_07713; organism=Lupinus angustifolius; type=CDS; length=387bp; location=Sequence derived from: Chr_LG07-CM007367.1:14727997..14729090- (Lupinus angustifolius
ATGGAAGCATGCTCTACATTCCATCCTAAACCTCAACCTTGTCCATGGCG
ACCAACCCTTTTCAACCCAAAACCCATTTCCCATTATCGCATCTCTTGCT
CCAACAACAACAACAACAATATCCCACGTTGGGATTCCAATGCTGAAACC
TCTTCACCCAGAAATTTCAGCTTCAACAATTTCAAAGCCAAACGTCCTCC
TCAGCAAGACCAACAAGAAGAATTCGGAAAGAAGAGACGGTGGTGGTCTG
ATGAAGCTGAATCTCCGTCGTTTGAGGAAGAAACTAGTGGGGGTTGGGAG
GAAGTTATAGATTCTCTCTGGATTTTCAAGGCATCTCTTGAGCAATCAAG
CAAAAGCAACGCACCTGGCCAGCATTGTCTCGGCTAA
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