rna-TanjilR_23600
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: NCRK_ARATH (Receptor-like serine/threonine-protein kinase NCRK OS=Arabidopsis thaliana OX=3702 GN=NCRK PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 2.172e-63 Identity = 119/219 (54.34%), Postives = 139/219 (63.47%), Query Frame = 1 Query: 2212 VGCF-PNASFMFGSRKETFRGNIIQFSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV 2865
GCF NAS S+ ET G I QFS+ ELE AT FS++++IG GGSS VYRG LKDG A+KRL G + D+ F EV ELLSRLHH+H+VPL+GYCSE GK +RLLVFEYM G+LRDCLDG GE M W R+++A+GAARGLEYLHEAAAPRILHRDVKS+NILLDENW AK+
Sbjct: 173 AGCFFQNASLFCVSKPETIHGAIFQFSYTELEQATNKFSSNSVIGHGGSSCVYRGQLKDGKTAAIKRLNTPKGDDTDTLFSTEV------------------------------------ELLSRLHHYHVVPLIGYCSEFHGKHAERLLVFEYMSYGSLRDCLDGELGEKMTWNIRISVALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWHAKI 355 HSP 2 Score: 116.701 bits (291), Expect = 1.888e-25 Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 1 Query: 3703 AVPRLQDSRRVITELVDPKLKGNFPEEEVQIMAYLAKDCLLLDPDNRPTMTEVVQILSSISPGKSRKRRNISAS-LFQVN 3939
AVPRLQDS+RVI EL DP+L G F EEE+QIMAYLAK+CLLLDP++RPTM EVVQILS+I+P S +RRN + LFQ N
Sbjct: 436 AVPRLQDSKRVIEELPDPRLNGKFAEEEMQIMAYLAKECLLLDPESRPTMREVVQILSTITPDTSSRRRNFPINYLFQSN 515 HSP 3 Score: 108.612 bits (270), Expect = 8.815e-23 Identity = 59/88 (67.05%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 3128 QNINLQITDLGMAKSLRSDDLPSCSNSPAR-MQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTGK--EESLVIWV 3382
+N + +ITDLGMAK L SD L S S+SP +QGTFGYFAPEYAI G AS SDVFSFGVVLLELI+GR PI K + EESLVIW
Sbjct: 349 ENWHAKITDLGMAKCLSSDGLQSGSSSPTTGLQGTFGYFAPEYAIAGCASQMSDVFSFGVVLLELITGRKPIQKPSNNKGEESLVIWA 436
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PERK7_ARATH (Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana OX=3702 GN=PERK7 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.986e-34 Identity = 85/213 (39.91%), Postives = 116/213 (54.46%), Query Frame = 1 Query: 2272 NIIQFSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV*VFKMRNQFRVDNRT 2910
N F+++EL +AT+ FS L+G GG YV++G L +G +AVK LK G + + F EV E++SR+HH HLV L+GYCS G QRLLV+E++ N L L G G M W TR+ IA+G+A+GL YLHE P+I+HRD+K+SNILLD N++AKV F + + DN T
Sbjct: 320 NNSTFTYEELASATQGFSKDRLLGQGGFGYVHKGILPNGKEIAVKSLK-AGSGQGEREFQAEV------------------------------------EIISRVHHRHLVSLVGYCSNAGG---QRLLVYEFLPNDTLEFHLHGKSGTVMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDHNFEAKVADFGLA-KLSQDNNT 491 HSP 2 Score: 77.411 bits (189), Expect = 5.930e-13 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 3128 QNINLQITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTGKEESLVIWV 3382
N ++ D G+AK L D+ S R+ GTFGY APEYA G+ + +SDVFSFGV+LLELI+GR P+ S E+SLV W
Sbjct: 471 HNFEAKVADFGLAK-LSQDNNTHVS---TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRGPVDLSGDMEDSLVDWA 551
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PERK1_ARATH (Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.110e-32 Identity = 84/214 (39.25%), Postives = 116/214 (54.21%), Query Frame = 1 Query: 2224 PNASFMFGSRKETFRGNIIQFSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV 2865
P+ + G K TF +++EL AT FS +NL+G GG YV++G L G VAVK+LK G + + F EV E++SR+HH HLV L+GYC + G VQRLLV+E++ N NL L G M W+TR+ IA+G+A+GL YLHE P+I+HRD+K+SNIL+D ++AKV
Sbjct: 255 PSPGLVLGFSKSTF-------TYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLK-AGSGQGEREFQAEV------------------------------------EIISRVHHRHLVSLIGYC--MAG--VQRLLVYEFVPNNNLEFHLHGKGRPTMEWSTRLKIALGSAKGLSYLHEDCNPKIIHRDIKASNILIDFKFEAKV 420 HSP 2 Score: 71.633 bits (174), Expect = 4.166e-11 Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 3143 QITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIH-KSTGKEESLVIWV 3382
++ D G+AK + SD + ++ R+ GTFGY APEYA G+ + +SDVFSFGVVLLELI+GR P+ + ++SLV W
Sbjct: 419 KVADFGLAK-IASD---TNTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWA 495
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PERK6_ARATH (Putative proline-rich receptor-like protein kinase PERK6 OS=Arabidopsis thaliana OX=3702 GN=PERK6 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 5.651e-31 Identity = 80/203 (39.41%), Postives = 113/203 (55.67%), Query Frame = 1 Query: 2272 NIIQFSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV*VFKM 2880
N F++DEL AT+ FS S L+G GG YV++G L +G +AVK LK G + + F EV +++SR+HH LV L+GYC + G QR+LV+E++ N L L G G+ + W TR+ IA+G+A+GL YLHE PRI+HRD+K+SNILLDE+++AKV F +
Sbjct: 321 NKSTFTYDELAAATQGFSQSRLLGQGGFGYVHKGILPNGKEIAVKSLK-AGSGQGEREFQAEV------------------------------------DIISRVHHRFLVSLVGYC--IAGG--QRMLVYEFLPNDTLEFHLHGKSGKVLDWPTRLKIALGSAKGLAYLHEDCHPRIIHRDIKASNILLDESFEAKVADFGL 482 HSP 2 Score: 76.2554 bits (186), Expect = 1.699e-12 Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 3128 QNINLQITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTGKEESLVIWV 3382
++ ++ D G+AK L D++ S R+ GTFGY APEYA G+ + SDVFSFGV+LLEL++GR P+ + E+SLV W
Sbjct: 471 ESFEAKVADFGLAK-LSQDNVTHVS---TRIMGTFGYLAPEYASSGKLTDRSDVFSFGVMLLELVTGRRPVDLTGEMEDSLVDWA 551
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PERK5_ARATH (Proline-rich receptor-like protein kinase PERK5 OS=Arabidopsis thaliana OX=3702 GN=PERK5 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.626e-31 Identity = 86/217 (39.63%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 2260 TFRGNIIQFSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV*VFKMRNQFRVDNRT 2910
T N F++DEL ATE F+ SNL+G GG YV++G L G VAVK LK G + + F EV +++SR+HH HLV L+GYC + G QRLLV+E++ N L L G + W TRV IA+G+ARGL YLHE PRI+HRD+K++NILLD +++ KV F + + DN T
Sbjct: 292 TLGHNQSTFTYDELSIATEGFAQSNLLGQGGFGYVHKGVLPSGKEVAVKSLK-LGSGQGEREFQAEV------------------------------------DIISRVHHRHLVSLVGYC--ISGG--QRLLVYEFIPNNTLEFHLHGKGRPVLDWPTRVKIALGSARGLAYLHEDCHPRIIHRDIKAANILLDFSFETKVADFGLA-KLSQDNYT 466 HSP 2 Score: 75.485 bits (184), Expect = 2.687e-12 Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 3143 QITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTGKEESLVIWV 3382
++ D G+AK L D+ S R+ GTFGY APEYA G+ S +SDVFSFGV+LLELI+GR P+ + E+SLV W
Sbjct: 451 KVADFGLAK-LSQDNYTHVS---TRVMGTFGYLAPEYASSGKLSDKSDVFSFGVMLLELITGRPPLDLTGEMEDSLVDWA 526
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PERK8_ARATH (Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana OX=3702 GN=PERK8 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.556e-31 Identity = 81/194 (41.75%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 2284 FSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV 2865
FS+DEL T FS NL+G GG VY+G L DG VAVK+LK GG++ + F EV E++SR+HH HLV L+GYC + RLLV++Y+ N L L M W TRV +A GAARG+ YLHE PRI+HRD+KSSNILLD +++A V
Sbjct: 327 FSYDELSQVTSGFSEKNLLGEGGFGCVYKGVLSDGREVAVKQLK-IGGSQGEREFKAEV------------------------------------EIISRVHHRHLVTLVGYCISEQ----HRLLVYDYVPNNTLHYHLHAPGRPVMTWETRVRVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDNSFEALV 479 HSP 2 Score: 72.0182 bits (175), Expect = 3.118e-11 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 3146 ITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTG-KEESLVIWV 3382
+ D G+AK + DL ++ R+ GTFGY APEYA G+ S ++DV+S+GV+LLELI+GR P+ S +ESLV W
Sbjct: 479 VADFGLAKIAQELDL--NTHVSTRVMGTFGYMAPEYATSGKLSEKADVYSYGVILLELITGRKPVDTSQPLGDESLVEWA 556
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PTI11_ARATH (PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PTI11 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.686e-30 Identity = 78/220 (35.45%), Postives = 110/220 (50.00%), Query Frame = 1 Query: 2251 RKETFRGNIIQFSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDG-------VCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV*VFKMRNQ 2889
+KE + S DE++ TENF + LIG G VY L DG VA+K+L AE D+ F Q+ ++SRL H +L+ LLG+C + G L R+L +E+ G+L D L G G + W TRV IA+ AARGLEYLHE + P ++HRD++SSN+LL E+++AK+ F + NQ
Sbjct: 45 KKEALPIEVPPLSLDEVKEKTENFGSKALIGEGSYGRVYYATLNDGVAVALKKLDVAPEAETDTEFLS------------------------------------QVSMVSRLKHENLIQLLGFC--VDGNL--RVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWITRVKIAVEAARGLEYLHEKSQPPVIHRDIRSSNVLLFEDYKAKIADFNLSNQ 224 HSP 2 Score: 69.707 bits (169), Expect = 5.766e-11 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 2 Query: 3125 FQNINLQITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPI-HKSTGKEESLVIW 3379
F++ +I D ++ + + R+ GTFGY APEYA+ G+ + +SDV+SFGVVLLEL++GR P+ H ++SLV W
Sbjct: 209 FEDYKAKIADFNLSNQAPDN---AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTW 291
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.231e-30 Identity = 84/194 (43.30%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 2284 FSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV 2865
FS++EL AT FS NL+G GG VY+G L DG VAVK+LK GG + D F EV E LSR+HH HLV ++G+C + G +RLL+++Y+ N +L L G + WATRV IA GAARGL YLHE PRI+HRD+KSSNILL++N+ A+V
Sbjct: 365 FSYEELVKATNGFSQENLLGEGGFGCVYKGILPDGRVVAVKQLK-IGGGQGDREFKAEV------------------------------------ETLSRIHHRHLVSIVGHC--ISGD--RRLLIYDYVSNNDLYFHLHGE-KSVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDARV 516 HSP 2 Score: 72.7886 bits (177), Expect = 1.581e-11 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 3131 NINLQITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTG-KEESLVIWV 3382
N + +++D G+A+ L ++ R+ GTFGY APEYA G+ + +SDVFSFGVVLLELI+GR P+ S +ESLV W
Sbjct: 511 NFDARVSDFGLARLA----LDCNTHITTRVIGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDTSQPLGDESLVEWA 591
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PERK2_ARATH (Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana OX=3702 GN=PERK2 PE=2 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 3.690e-30 Identity = 75/194 (38.66%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 2284 FSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV 2865
F+++EL AT FS +NL+G GG YV++G L++G VAVK+LK +G ++ + F EV ++SR+HH HLV L+GYC QRLLV+E++ N L L G M W++R+ IA+G+A+GL YLHE P+I+HRD+K+SNIL+D ++AKV
Sbjct: 342 FNYEELSRATNGFSEANLLGQGGFGYVFKGMLRNGKEVAVKQLK-EGSSQGEREFQAEV------------------------------------GIISRVHHRHLVALVGYCI----ADAQRLLVYEFVPNNTLEFHLHGKGRPTMEWSSRLKIAVGSAKGLSYLHENCNPKIIHRDIKASNILIDFKFEAKV 494 HSP 2 Score: 72.0182 bits (175), Expect = 2.828e-11 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 3143 QITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIH-KSTGKEESLVIWV 3382
++ D G+AK + SD + ++ R+ GTFGY APEYA G+ + +SDVFSFGVVLLELI+GR PI + + SLV W
Sbjct: 493 KVADFGLAK-IASD---TNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVVLLELITGRRPIDVNNVHADNSLVDWA 569
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Match: PEK15_ARATH (Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana OX=3702 GN=PERK15 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.729e-30 Identity = 79/208 (37.98%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 2284 FSFDELENATENFSASNLIGLGGSSYVYRGWLKDGSNVAVKRLKDQGGAEADSAFFKEVVPNVIMFQCLEARLTLNLPYRCTASIVVNNVLFVQIELLSRLHHFHLVPLLGYCSELKGKLVQRLLVFEYMINGNLRDCLDGVCGENMGWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWQAKV*VFKM-RNQFRVDN 2904
F++++L AT NFS +NL+G GG YV+RG L DG+ VA+K+LK G + + F E I+ +SR+HH HLV LLGYC + G QRLLV+E++ N L L M W+ R+ IA+GAA+GL YLHE P+ +HRDVK++NIL+D++++AK+ F + R+ D
Sbjct: 131 FTYEDLSKATSNFSNTNLLGQGGFGYVHRGVLVDGTLVAIKQLK-SGSGQGEREFQAE------------------------------------IQTISRVHHRHLVSLLGYC--ITG--AQRLLVYEFVPNKTLEFHLHEKERPVMEWSKRMKIALGAAKGLAYLHEDCNPKTIHRDVKAANILIDDSYEAKLADFGLARSSLDTDT 297 HSP 2 Score: 73.1738 bits (178), Expect = 8.376e-12 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 3143 QITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKST--GKEESLVIWV 3382
++ D G+A+S L + ++ R+ GTFGY APEYA G+ + +SDVFS GVVLLELI+GR P+ KS ++S+V W
Sbjct: 282 KLADFGLARS----SLDTDTHVSTRIMGTFGYLAPEYASSGKLTEKSDVFSIGVVLLELITGRRPVDKSQPFADDDSIVDWA 359 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23600 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23600_La_Tanjil_v1.0 ID=rna-TanjilR_23600_La_Tanjil_v1.0; Name=rna-TanjilR_23600; organism=Lupinus angustifolius; type=mRNA; length=4354bpback to top protein sequence of rna-TanjilR_23600_La_Tanjil_v1.0 >rna-TanjilR_23600_La_Tanjil_v1.0 ID=rna-TanjilR_23600_La_Tanjil_v1.0; Name=rna-TanjilR_23600_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=640bpback to top mRNA from alignment at Chr_LG08-CM007368.1:23547617..23551970+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23600_La_Tanjil_v1.0 ID=rna-TanjilR_23600_La_Tanjil_v1.0; Name=rna-TanjilR_23600; organism=Lupinus angustifolius; type=mRNA; length=4354bp; location=Sequence derived from: Chr_LG08-CM007368.1:23547617..23551970+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:23547617..23551970+ >rna-TanjilR_23600_La_Tanjil_v1.0 ID=rna-TanjilR_23600_La_Tanjil_v1.0; Name=rna-TanjilR_23600; organism=Lupinus angustifolius; type=CDS; length=1923bp; location=Sequence derived from: Chr_LG08-CM007368.1:23547617..23551970+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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