rna-TanjilR_23543

Transcript Overview
Namerna-TanjilR_23543
Unique Namerna-TanjilR_23543_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1479
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG08-CM007368.1supercontigChr_LG08-CM007368.1:24008183..24009661 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL122Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL254Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL591Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1271Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR1340Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1392Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1451Cajanus cajan Asha genome v1.0Cajanus cajan
anccR1457Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1096Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1146Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1285Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0947Pisum sativum Cameor genome v1aPisum sativum
anpsR0973Pisum sativum Cameor genome v1aPisum sativum
anpvR1275Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1286Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1084Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1110Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1274Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1079Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1118Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1126Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1117Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1167Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1156Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR1179Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1165Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1072Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1089Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1036Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR1065Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1223Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1240Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR1251Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR1001Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR1045Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1240Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1060Cicer arietinum
ancarR1074Cicer arietinum
ancarR1105Cicer arietinum
anccaR1056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR1096Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1258Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1276Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1283Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1188Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR1262Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1260Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR1266Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1275Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR1283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1275Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR1045Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1072Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1313Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1340Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1377Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1378Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan05g189100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat05G0784200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_004486956.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
PvulFLAVERTChr08.1000070Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.07G038100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigun05g257800.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va03G001640.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.07G051200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.06G171900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat5g284400.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.1g023040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Va05G051250.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_06G01347.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014642227.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
PvulFLAVERTChr11.1000424Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cr_01140.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun05g257800.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.06G199900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_00463.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
PvulFLAVERTChr05.932Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_07G00406.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_02610Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.1g035000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.L005043.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cc_v2.0_09279.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va08G064900.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_021807Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014638363.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.011G064500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr05.2429Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_17197Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_30243Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_03301Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_11315Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_23543gene-TanjilG_23543_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23543rna-TanjilR_23543_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_23543_La_Tanjil_v1.0rna-TanjilR_23543_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008183..24008242rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008183..24008242Lupinus angustifoliusexon
rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008316..24008709rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008316..24008709Lupinus angustifoliusexon
rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008830..24009443rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008830..24009443Lupinus angustifoliusexon
rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24009596..24009661rna-TanjilR_23543_La_Tanjil_v1.0-exon-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24009596..24009661Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008183..24008242rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008183..24008242Lupinus angustifoliusCDS
rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008316..24008709rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008316..24008709Lupinus angustifoliusCDS
rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008830..24009443rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24008830..24009443Lupinus angustifoliusCDS
rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24009596..24009661rna-TanjilR_23543_La_Tanjil_v1.0-CDS-Chr_LG08-CM007368.1_La_Tanjil_v1.0-1579734366:24009596..24009661Lupinus angustifoliusCDS


Homology
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BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 330/381 (86.61%), Postives = 337/381 (88.45%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNIQR 1276
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSS++EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct:   21 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum OX=4113 GN=AC97 PE=3 SV=1)

HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 330/381 (86.61%), Postives = 338/381 (88.71%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNIQR 1276
            AGFAGDDAPRAVFPSIVGRPRH+GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT+AEREIVRDVKEKLAYIALDYEQELETSKTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct:   21 AGFAGDDAPRAVFPSIVGRPRHSGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT5_SOLTU (Actin-66 (Fragment) OS=Solanum tuberosum OX=4113 PE=3 SV=1)

HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 328/376 (87.23%), Postives = 334/376 (88.83%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 1261
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDVKEKL+YIALDYEQE+ET+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:    1 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0
Identity = 329/381 (86.35%), Postives = 336/381 (88.19%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNIQR 1276
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDVKEKL+YIALD+EQE+ETSKTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct:   21 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFEQEMETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGKIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT9_SOLTU (Actin-82 (Fragment) OS=Solanum tuberosum OX=4113 PE=3 SV=1)

HSP 1 Score: 667.922 bits (1722), Expect = 0.000e+0
Identity = 327/376 (86.97%), Postives = 333/376 (88.56%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 1261
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDVKEKL+YIALDYEQEL+TSKTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:    1 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQELDTSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFNGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT8_SOLTU (Actin-79 (Fragment) OS=Solanum tuberosum OX=4113 PE=3 SV=1)

HSP 1 Score: 667.922 bits (1722), Expect = 0.000e+0
Identity = 327/376 (86.97%), Postives = 333/376 (88.56%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 1261
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDVKEKL+YIALDYEQE+ET+KTSS+VEKSYELPDGQVI IGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:    1 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVIPIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum OX=4113 GN=AC58 PE=3 SV=1)

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 327/381 (85.83%), Postives = 336/381 (88.19%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNIQR 1276
            AGFAGDDAPRAVFP IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDVKEKL+YIALD+EQELETSKTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS+IGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKE++ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct:   21 AGFAGDDAPRAVFPRIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
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BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT1_SOLLC (Actin-41 (Fragment) OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 326/376 (86.70%), Postives = 334/376 (88.83%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 1261
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR+TG                                        IVLDSGDG+SHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT+AEREIVRDVKEKLAYIALDYEQELETSKTSS+VEKSYELPDGQVI IG+ERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:    1 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRSTG----------------------------------------IVLDSGDGLSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVIPIGSERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACT1 PE=2 SV=1)

HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0
Identity = 326/381 (85.56%), Postives = 336/381 (88.19%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNIQR 1276
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YIALDY+QE+ET+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS IGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct:   21 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
[Close]
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica OX=39946 GN=ACT1 PE=2 SV=1)

HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0
Identity = 326/381 (85.56%), Postives = 336/381 (88.19%), Query Frame = 2 
Query:  134 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG*LLRL*D*HSMHFNSE*R*WF*SCLISKV*FMLVILICTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNIQR 1276
            AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG                                        IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YIALDY+QE+ET+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS IGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct:   21 AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG----------------------------------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23543 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ACT_GOSHI0.000e+086.61Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1[more]
ACT11_SOLTU0.000e+086.61Actin-97 OS=Solanum tuberosum OX=4113 GN=AC97 PE=3... [more]
ACT5_SOLTU0.000e+087.23Actin-66 (Fragment) OS=Solanum tuberosum OX=4113 P... [more]
ACT1_TOBAC0.000e+086.35Actin OS=Nicotiana tabacum OX=4097 PE=3 SV=1[more]
ACT9_SOLTU0.000e+086.97Actin-82 (Fragment) OS=Solanum tuberosum OX=4113 P... [more]
ACT8_SOLTU0.000e+086.97Actin-79 (Fragment) OS=Solanum tuberosum OX=4113 P... [more]
ACT3_SOLTU0.000e+085.83Actin-58 OS=Solanum tuberosum OX=4113 GN=AC58 PE=3... [more]
ACT1_SOLLC0.000e+086.70Actin-41 (Fragment) OS=Solanum lycopersicum OX=408... [more]
ACT1_ORYSJ0.000e+085.56Actin-1 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
ACT1_ORYSI0.000e+085.56Actin-1 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPRINTSPR00190ACTINcoord: 51..62
score: 89.2
coord: 238..254
score: 84.94
coord: 63..85
score: 92.06
coord: 142..161
score: 96.3
coord: 28..37
score: 96.55
coord: 117..130
score: 97.31
IPR004000Actin familySMARTSM00268actin_3coord: 7..377
e-value: 3.2E-233
score: 790.8
IPR004000Actin familyPFAMPF00022Actincoord: 5..377
e-value: 9.1E-147
score: 488.9
NoneNo IPR availableGENE3D3.30.420.40coord: 140..340
e-value: 6.4E-187
score: 622.5
NoneNo IPR availableGENE3D3.90.640.10coord: 182..274
e-value: 6.4E-187
score: 622.5
NoneNo IPR availableGENE3D3.30.420.40coord: 10..373
e-value: 6.4E-187
score: 622.5
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 10..183
e-value: 2.60782E-17
score: 77.2439
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 6..155
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 149..377
IPR020902Actin/actin-like conserved sitePROSITEPS01132ACTINS_ACT_LIKEcoord: 106..118
IPR004001Actin, conserved sitePROSITEPS00432ACTINS_2coord: 358..366
IPR004001Actin, conserved sitePROSITEPS00406ACTINS_1coord: 55..65

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_23543_La_Tanjil_v1.0 ID=rna-TanjilR_23543_La_Tanjil_v1.0; Name=rna-TanjilR_23543; organism=Lupinus angustifolius; type=mRNA; length=1479bp
ATGGCAGACGGTGAGGATATTCAGCCACTCGTCTGCGACAATGGCACAGG
GATGGTTAAGGTAAAATACTAGGTTGCTCTTATTTCCATGTTGTCTTTGA
GTTTGTGTTGATTTATTGTTTTGCAACATTTAGGCTGGATTTGCGGGAGA
TGATGCTCCAAGGGCAGTATTTCCTAGCATTGTTGGTCGTCCACGTCACA
CCGGTGTGATGGTTGGCATGGGTCAAAAGGATGCATATGTTGGTGATGAA
GCTCAATCCAAGAGAGGTATATTGACTTTGAAATATCCCATTGAGCATGG
TATTGTTAGTAACTGGGATGATATGGAGAAGATCTGGCATCACACTTTCT
ACAACGAACTCCGTGTAGCTCCCGAGGAGCATCCGGTTCTGCTCACTGAA
GCACCTCTCAATCCAAAGGCTAATCGCGAGAAAATGACCCAAATTATGTT
CGAGACCTTCAACACCCCTGCCATGTATGTTGCTATCCAGGCTGTTTTGT
CCCTCTATGCCAGTGGTCGTACAACTGGTTAGTTGCTTCGTCTTTAAGAT
TAACATTCGATGCATTTTAATTCTGAGTAGAGGTGATGGTTCTAAAGTTG
TCTAATTTCGAAGGTTTGATTTATGCTTGTTATATTAATTTGTACAGGAA
TTGTTCTGGATTCTGGAGATGGTGTCAGCCATACTGTTCCTATTTATGAG
GGGTATGCCCTTCCTCATGCCATCCTTCGTCTTGACTTAGCAGGACGCGA
CCTCACTGATGCCCTCATGAAAATCCTTACAGAACGTGGTTATTCGTTCA
CTACCACAGCTGAGCGTGAAATTGTAAGGGACGTGAAGGAAAAACTTGCT
TATATTGCCCTCGATTATGAGCAGGAGCTTGAAACTTCAAAAACTAGCTC
TGCTGTTGAGAAGAGCTACGAGTTGCCTGATGGACAGGTCATCACCATTG
GCGCTGAGCGATTCAGATGTCCCGAAGTCCTCTTCCAGCCATCCATGATC
GGAATGGAAGCTGTAGGCATTCACGAGACCACATACAATTCAATTATGAA
GTGTGATGTCGATATTAGGAAAGACTTGTATGGAAACATTGTTCTCAGTG
GTGGTTCTACCATGTTCCCTGGTATTGCTGACAGAATGAGCAAGGAAATC
TCTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCTGA
GAGAAAGTACAGTGTCTGGATCGGTGGCTCTATCTTGGCTTCTCTCAGCA
CTTTCCAACAGGTAAATATTCAGCGATGAGATAATGCatatgtttttttc
cttttagttCTACTAACACTTCCATGATGGAAATCACTAATGAGTTGAAT
GTCAACTGTTTGAACCAACTGTTGGGGAATACTAATGATGGGAAATTGGT
TTTTGAAATGCAGATGTGGATTGCAAAGGCAGAATATGATGAGGCTGGTC
CTTCAATTGTACACAGGAAATGCTTCTAA
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protein sequence of rna-TanjilR_23543_La_Tanjil_v1.0

>rna-TanjilR_23543_La_Tanjil_v1.0 ID=rna-TanjilR_23543_La_Tanjil_v1.0; Name=rna-TanjilR_23543_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=377bp
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMG
QKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP
EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY
SFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVI
TIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIV
LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS
LSTFQQMWIAKAEYDEAGPSIVHRKCF
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mRNA from alignment at Chr_LG08-CM007368.1:24008183..24009661+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_23543_La_Tanjil_v1.0 ID=rna-TanjilR_23543_La_Tanjil_v1.0; Name=rna-TanjilR_23543; organism=Lupinus angustifolius; type=mRNA; length=1479bp; location=Sequence derived from: Chr_LG08-CM007368.1:24008183..24009661+ (Lupinus angustifolius
ATGGCAGACGGTGAGGATATTCAGCCACTCGTCTGCGACAATGGCACAGG
GATGGTTAAGGTAAAATACTAGGTTGCTCTTATTTCCATGTTGTCTTTGA
GTTTGTGTTGATTTATTGTTTTGCAACATTTAGGCTGGATTTGCGGGAGA
TGATGCTCCAAGGGCAGTATTTCCTAGCATTGTTGGTCGTCCACGTCACA
CCGGTGTGATGGTTGGCATGGGTCAAAAGGATGCATATGTTGGTGATGAA
GCTCAATCCAAGAGAGGTATATTGACTTTGAAATATCCCATTGAGCATGG
TATTGTTAGTAACTGGGATGATATGGAGAAGATCTGGCATCACACTTTCT
ACAACGAACTCCGTGTAGCTCCCGAGGAGCATCCGGTTCTGCTCACTGAA
GCACCTCTCAATCCAAAGGCTAATCGCGAGAAAATGACCCAAATTATGTT
CGAGACCTTCAACACCCCTGCCATGTATGTTGCTATCCAGGCTGTTTTGT
CCCTCTATGCCAGTGGTCGTACAACTGGTTAGTTGCTTCGTCTTTAAGAT
TAACATTCGATGCATTTTAATTCTGAGTAGAGGTGATGGTTCTAAAGTTG
TCTAATTTCGAAGGTTTGATTTATGCTTGTTATATTAATTTGTACAGGAA
TTGTTCTGGATTCTGGAGATGGTGTCAGCCATACTGTTCCTATTTATGAG
GGGTATGCCCTTCCTCATGCCATCCTTCGTCTTGACTTAGCAGGACGCGA
CCTCACTGATGCCCTCATGAAAATCCTTACAGAACGTGGTTATTCGTTCA
CTACCACAGCTGAGCGTGAAATTGTAAGGGACGTGAAGGAAAAACTTGCT
TATATTGCCCTCGATTATGAGCAGGAGCTTGAAACTTCAAAAACTAGCTC
TGCTGTTGAGAAGAGCTACGAGTTGCCTGATGGACAGGTCATCACCATTG
GCGCTGAGCGATTCAGATGTCCCGAAGTCCTCTTCCAGCCATCCATGATC
GGAATGGAAGCTGTAGGCATTCACGAGACCACATACAATTCAATTATGAA
GTGTGATGTCGATATTAGGAAAGACTTGTATGGAAACATTGTTCTCAGTG
GTGGTTCTACCATGTTCCCTGGTATTGCTGACAGAATGAGCAAGGAAATC
TCTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCTGA
GAGAAAGTACAGTGTCTGGATCGGTGGCTCTATCTTGGCTTCTCTCAGCA
CTTTCCAACAGGTAAATATTCAGCGATGAGATAATGCatatgtttttttc
cttttagttCTACTAACACTTCCATGATGGAAATCACTAATGAGTTGAAT
GTCAACTGTTTGAACCAACTGTTGGGGAATACTAATGATGGGAAATTGGT
TTTTGAAATGCAGATGTGGATTGCAAAGGCAGAATATGATGAGGCTGGTC
CTTCAATTGTACACAGGAAATGCTTCTAA
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Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24008183..24009661+

>rna-TanjilR_23543_La_Tanjil_v1.0 ID=rna-TanjilR_23543_La_Tanjil_v1.0; Name=rna-TanjilR_23543; organism=Lupinus angustifolius; type=CDS; length=1134bp; location=Sequence derived from: Chr_LG08-CM007368.1:24008183..24009661+ (Lupinus angustifolius
ATGGCAGACGGTGAGGATATTCAGCCACTCGTCTGCGACAATGGCACAGG
GATGGTTAAGGCTGGATTTGCGGGAGATGATGCTCCAAGGGCAGTATTTC
CTAGCATTGTTGGTCGTCCACGTCACACCGGTGTGATGGTTGGCATGGGT
CAAAAGGATGCATATGTTGGTGATGAAGCTCAATCCAAGAGAGGTATATT
GACTTTGAAATATCCCATTGAGCATGGTATTGTTAGTAACTGGGATGATA
TGGAGAAGATCTGGCATCACACTTTCTACAACGAACTCCGTGTAGCTCCC
GAGGAGCATCCGGTTCTGCTCACTGAAGCACCTCTCAATCCAAAGGCTAA
TCGCGAGAAAATGACCCAAATTATGTTCGAGACCTTCAACACCCCTGCCA
TGTATGTTGCTATCCAGGCTGTTTTGTCCCTCTATGCCAGTGGTCGTACA
ACTGGAATTGTTCTGGATTCTGGAGATGGTGTCAGCCATACTGTTCCTAT
TTATGAGGGGTATGCCCTTCCTCATGCCATCCTTCGTCTTGACTTAGCAG
GACGCGACCTCACTGATGCCCTCATGAAAATCCTTACAGAACGTGGTTAT
TCGTTCACTACCACAGCTGAGCGTGAAATTGTAAGGGACGTGAAGGAAAA
ACTTGCTTATATTGCCCTCGATTATGAGCAGGAGCTTGAAACTTCAAAAA
CTAGCTCTGCTGTTGAGAAGAGCTACGAGTTGCCTGATGGACAGGTCATC
ACCATTGGCGCTGAGCGATTCAGATGTCCCGAAGTCCTCTTCCAGCCATC
CATGATCGGAATGGAAGCTGTAGGCATTCACGAGACCACATACAATTCAA
TTATGAAGTGTGATGTCGATATTAGGAAAGACTTGTATGGAAACATTGTT
CTCAGTGGTGGTTCTACCATGTTCCCTGGTATTGCTGACAGAATGAGCAA
GGAAATCTCTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTC
CACCTGAGAGAAAGTACAGTGTCTGGATCGGTGGCTCTATCTTGGCTTCT
CTCAGCACTTTCCAACAGATGTGGATTGCAAAGGCAGAATATGATGAGGC
TGGTCCTTCAATTGTACACAGGAAATGCTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR020902Actin/actin-like_CS
IPR004001Actin_CS