rna-TanjilR_23485
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: SMG1_HUMAN (Serine/threonine-protein kinase SMG1 OS=Homo sapiens OX=9606 GN=SMG1 PE=1 SV=3) HSP 1 Score: 244.202 bits (622), Expect = 1.745e-62 Identity = 138/338 (40.83%), Postives = 193/338 (57.10%), Query Frame = 1 Query: 6766 VMRRINVLKEEAARIAENITLSQNEKNKINSARYSAMMAPIVVALERRLASTSRKPETPHEAWFQEEYKEQLKSATVSFKTPPASSAALGDVWRPFDSIAASLASYQRKSS---ISLQDVAPHLALLSSSDVPMPGLEKQMKVPDSDKATDLQGVVTIASFHKQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFXXXXXXXXXXXXGIRYYSVTPISGRAGLIQWVDNVVSIYSVFKSWQTRLHLAQFSSVGTTSTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPHEVKCKVLIDLMKEVPKHLLYQELW 7770 V+RRI L++E R+ N TL + EK I +++A+M PIV ALE + T+ ETPHE WFQ+ Y + +++A KTP + A G W PF I SL +K + + L++++P LA ++++++ +PG +V D VTI S +TIL TKTKPKKL LGSDG+ Y YL KG EDL LD RIMQ L +N + + + R+YSVTP+ R+GLIQWVD ++ ++K WQ R Q + P VPRPS+++Y KI PALK G+ +SRRDWP V VL +LM+ P +LL +ELW Sbjct: 1977 VLRRIQQLEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENALEKLKTP-LNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG-----EVSARD-------TVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEATPPNLLAKELW 2301 HSP 2 Score: 181.03 bits (458), Expect = 2.494e-43 Identity = 84/156 (53.85%), Postives = 116/156 (74.36%), Query Frame = 1 Query: 8293 YSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGDFHDEAAI----GGEE------RKGMELAVSLSLFASRVQEIRV 8730 Y+ S A MSMVG+++GLGDRHLDN+LID +G++VHIDYNVCF+KG+ L++PE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL LLE FV+DPLV+WT G A GG++ ++ ME ++ SLF+SRV EI+V Sbjct: 2317 YARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIKV 2472 HSP 3 Score: 78.9518 bits (193), Expect = 1.658e-12 Identity = 95/395 (24.05%), Postives = 160/395 (40.51%), Query Frame = 2 Query: 2264 IRDAYLKLLAHVLPSTIYTCGLYNHGRFRSVDLGFGNCSKMHWKQLFALKQLPLQLHSQQLVSILSYI--SQRWKVPLSSWIQRLIHSCRSSKDVILSQPEETGNFGASSQWLDVPVDEDILEKICSVNNLAGAW-WAVQEAARYCIATRLRTNLGGPTQTFAALERMLL-----------DVAHLLQLDNEQNDGNLSMIGSSGAHLLPMRLLLDFVESLKKNVYNAYEG---SVILPPATRQSSLFFRANKKVCEDWFTRICEPMMNAGLALHCNDAVIQYCTLRLQELKNLFVSALKEKSRTQVNDNLHNARARYKGDVLKV-VRHISLALCKSSEPDSLIGLQKWVLITFSSLLGDENQSFNECGPVAPLSWIRGLVFQARGEYENAAAHF 3394 IR A+ KLL + + + NH + + L + F H Q ++S+I + +W++RL +SC Q LD I + + A W WA+ EAA++ + ++LRT LG TF +E ++ DV+ DN++ GN + L + LLL ++E+L+K +YNAYEG ++ PP ++ FF N++ C+DW TRI +M GL +++ L E+K +S +G+ L+V + + ALC+ P+++ G+ W SS++G L WI + QA G +E A+ + Sbjct: 813 IRQAFGKLLKSIPLDVVLSNN--NHTEIQEISLALRSHMSKAPSNTF---------HPQDFSDVISFILYGNSHRTGKDNWLERLFYSC---------------------QRLDKRDQSTIPRNLLKTD--AVLWQWAIWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDQDVSQWTTADNDEGHGN---------NQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRT--FFYTNRQTCQDWLTRIRLSIMRVGLLAGQPAVTVRHGFDLLTEMKTTSLS---------------------QGNELEVTIMMVVEALCELHCPEAIQGIAVWS----SSIVGKN------------LLWINSVAQQAEGRFEKASVEY 1125 HSP 4 Score: 49.2914 bits (116), Expect = 4.770e-8 Identity = 18/33 (54.55%), Postives = 27/33 (81.82%), Query Frame = 2 Query: 15164 REIGIAEQVDCLLKQATSVDNLCNMYEGWTPWI 15262 R + +AEQVD ++K+AT++DNL +YEGWT W+ Sbjct: 3629 RRMSVAEQVDYVIKEATNLDNLAQLYEGWTAWV 3661 HSP 5 Score: 33.8834 bits (76), Expect = 4.770e-8 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 15012 KNAYALSVLRRVEMKIEGRDISEHR 15086 +N+YA+SV +RV+ K+EGRD+ +R Sbjct: 3605 RNSYAVSVWKRVKAKLEGRDVDPNR 3629 HSP 6 Score: 40.817 bits (94), Expect = 8.588e-7 Identity = 23/97 (23.71%), Postives = 46/97 (47.42%), Query Frame = 2 Query: 5018 SALDGFVDIWWSLRRRRVSLFGHAAHGYIQFLSYSSSHVRHCQMPGSDYVA--LKEKNGSYTLRATLFILHILLNYGVELKDTLESALSVVPLLPWQ 5302 SA +G + +W + R SL+ + Y FL ++ + + +++ +++ + ATL +L +L+ + EL+ LE L P PW+ Sbjct: 1724 SATEGVIKVWRKVVDRIFSLYKLSCSAYFTFLKLNAGQIPLDEDDPRLHLSHRVEQSTDDMIVMATLRLLRLLVKHAGELRQYLEHGLETTPTAPWR 1820 HSP 7 Score: 38.1206 bits (87), Expect = 8.588e-7 Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 3 Query: 5400 VTPQLFARLSSHPEQVVRKHLEGLLIMLAKQSPCSIVYPTLV 5525 + PQLF+RL+ HPE VR+ + LL +A+ SP I+YP +V Sbjct: 1822 IIPQLFSRLN-HPEVYVRQSICNLLCRVAQDSPHLILYPAIV 1862
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: SMG1_MOUSE (Serine/threonine-protein kinase SMG1 OS=Mus musculus OX=10090 GN=Smg1 PE=1 SV=3) HSP 1 Score: 244.202 bits (622), Expect = 1.962e-62 Identity = 138/338 (40.83%), Postives = 192/338 (56.80%), Query Frame = 1 Query: 6766 VMRRINVLKEEAARIAENITLSQNEKNKINSARYSAMMAPIVVALERRLASTSRKPETPHEAWFQEEYKEQLKSATVSFKTPPASSAALGDVWRPFDSIAASLASYQRKSS---ISLQDVAPHLALLSSSDVPMPGLEKQMKVPDSDKATDLQGVVTIASFHKQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFXXXXXXXXXXXXGIRYYSVTPISGRAGLIQWVDNVVSIYSVFKSWQTRLHLAQFSSVGTTSTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPHEVKCKVLIDLMKEVPKHLLYQELW 7770 V+RRI L++E R+ N TL + EK I +++A+M PIV ALE + T+ ETPHE WFQ+ Y + + +A KTP ++ A G W PF I SL +K + + L +++P LA ++++++ +PG +V D VTI S +TIL TKTKPKKL LGSDG+ Y YL KG EDL LD RIMQ L +N + + + R+YSVTP+ R+GLIQWVD ++ ++K WQ R Q + P VPRPS+++Y KI PALK G+ +SRRDWP V VL +LM+ P +LL +ELW Sbjct: 1975 VLRRIQQLEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIDNALEKLKTP-SNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLDEISPWLAAMTNTEIALPG-----EVSARD-------TVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQKAQDSYQTPQNPSIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEATPPNLLAKELW 2299 HSP 2 Score: 181.03 bits (458), Expect = 2.371e-43 Identity = 84/156 (53.85%), Postives = 116/156 (74.36%), Query Frame = 1 Query: 8293 YSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGDFHDEAAI----GGEE------RKGMELAVSLSLFASRVQEIRV 8730 Y+ S A MSMVG+++GLGDRHLDN+LID +G++VHIDYNVCF+KG+ L++PE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL LLE FV+DPLV+WT G A GG++ ++ ME ++ SLF+SRV EI+V Sbjct: 2315 YARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIKV 2470 HSP 3 Score: 77.411 bits (189), Expect = 4.379e-12 Identity = 95/385 (24.68%), Postives = 161/385 (41.82%), Query Frame = 2 Query: 2264 IRDAYLKLLAHVLPSTIYTCGLYNHGRFRSVDLGFGNCSKMHWKQLFALKQLPLQLHSQQLVSILSYI--SQRWKVPLSSWIQRLIHSCRSSKDVILSQPEETGNFGASSQWLDVPVDEDILEKICSVNNLAGAW-WAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDV-AHLLQLDNEQNDGNLSMIGSS-GAHLLPMRLLLDFVESLKKNVYNAYEG---SVILPPATRQSSLFFRANKKVCEDWFTRICEPMMNAGLALHCNDAVIQYCTLRLQELKNLFVSALKEKSRTQVNDNLHNARARYKGDVLKVVRHISLALCKSSEPDSLIGLQKWVLITFSSLLGDENQSFNECGPVAPLSWIRGLVFQARGEYENAAAHF 3394 IR A+ KLL + + + NH + + L + F H Q ++S+I + +W++RL +SC Q LD I + + A W WA+ EAA++ + ++LRT LG TF +E ++ + AH L D + + + G++ L + LLL ++E+L+K +YNAYEG ++ PP ++ FF N++ C+DW TRI +M GL +++ L E+K ++L + S +V ++ VV ALC+ P+++ G+ W SS +G L WI + QA G +E A+ + Sbjct: 811 IRQAFGKLLKSIPLDVVLSNN--NHTEIQEISLALRSHMSKAPSNTF---------HPQDFSDVISFILYGNSHRTGKDNWLERLFYSC---------------------QRLDKRDQSTIPRNLLKTD--AVLWQWAIWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDQDVSQWTTADNDEGHGSNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRT--FFYTNRQTCQDWLTRIRLSIMRVGLLAGQPAVTVRHGFDLLTEMK---TNSLTQGSELEVT-------------IMMVVE----ALCELHCPEAIQGIAVWS----SSAVGKN------------LLWINSVAQQAEGRFEKASVEY 1123 HSP 4 Score: 49.2914 bits (116), Expect = 5.088e-8 Identity = 18/33 (54.55%), Postives = 27/33 (81.82%), Query Frame = 2 Query: 15164 REIGIAEQVDCLLKQATSVDNLCNMYEGWTPWI 15262 R + +AEQVD ++K+AT++DNL +YEGWT W+ Sbjct: 3626 RRMSVAEQVDYVIKEATNLDNLAQLYEGWTAWV 3658 HSP 5 Score: 33.8834 bits (76), Expect = 5.088e-8 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 15012 KNAYALSVLRRVEMKIEGRDISEHR 15086 +N+YA+SV +RV+ K+EGRD+ +R Sbjct: 3602 RNSYAVSVWKRVKAKLEGRDVDPNR 3626
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: SMG1_DICDI (Probable serine/threonine-protein kinase smg1 OS=Dictyostelium discoideum OX=44689 GN=smg1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.885e-39 Identity = 113/366 (30.87%), Postives = 166/366 (45.36%), Query Frame = 1 Query: 6874 MMAPIVVALERRLASTSRKP-ETPHEAWFQEEYKEQLKSATVSFKTPPASSAALGDVWRPFDSIAASLASYQ--RKSSISLQDVAPHLALLSSSDVPMPGLE---------------------KQMKVPDSDKATDLQGVVTIASFHKQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFXXXXXXXXXXXXGIRYYSVTPISGRAGLIQWVDNVVSIYSVFKSWQTRLHLAQFSSV-------------------------------------------GTTSTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPHEVKCKVLIDLMKEVPKHLLYQELW 7770 ++ PI L+R A+T +TPHE WF + + E + +F+ ++ PFD + +A +Q R S+SL V P LAL + MPG + + S +Q VTI + +L TKTKPKK+ +LGSDG Y YLLKGREDL LD RIMQLL ++ L++ L R YSV P+S +GLIQWV+ V ++S++K+W + + TT++ P + RP D+FY KI P L++ G+ + R +WP E+ +VL +LM+E PK +L +ELW Sbjct: 1670 LLQPIYEKLKRLTAATVLSVCKTPHEKWFTKCHFETINKTIRAFEKQNKPTS-------PFDVLHDLIAEFQQYRLISLSLSSVNPSLALFRPTITQMPGTDLNYFNINHIHHHHHHHNHHGNNNNQHSTSSGNLPIQNQVTIQLIKPTIYLLPTKTKPKKMAMLGSDGNLYYYLLKGREDLHLDERIMQLLNVVDQLLMNDKKPTLKLLRTRNYSVIPLSQSSGLIQWVEGAVPLFSIYKNWYKNDQVYKQQQQQQQQLQQQQQQQQQQQQQQPQPQQQPQQQPQQQPQQQPQPQQNSTTTSNIVNKPIIARPVDIFYAKITPLLEKAGLNFMTPRSEWPKEILIQVLNELMQETPKWILQRELW 2028 HSP 2 Score: 162.54 bits (410), Expect = 7.942e-38 Identity = 70/119 (58.82%), Postives = 93/119 (78.15%), Query Frame = 1 Query: 8275 LLSICRYSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGD 8631 L YS S+A MS++G+++GLGDRHLDNIL+D +G+IVHIDYN+CF+KG LKIPE VPFR+TQ+ E ALGLTG++G+FR ++ +LRKNKDILL LLE F++DPL +W + Sbjct: 2038 FLKTQSYSRSLALMSVIGYMIGLGDRHLDNILLDLKTGEIVHIDYNICFEKGAELKIPERVPFRMTQIFEYALGLTGVQGTFRETSIQIMHLLRKNKDILLNLLETFIYDPLFDWKHSN 2156 HSP 3 Score: 100.523 bits (249), Expect = 4.568e-19 Identity = 77/296 (26.01%), Postives = 146/296 (49.32%), Query Frame = 2 Query: 2660 WWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDVAHLLQLDNEQNDGNLSMIGSSGAHLLPMRLLLDFVESLKKNVYNAYEGSVILPPATRQSSLFFRANKKVCEDWFTRICEPMMNAGLALHCNDAVIQYCTLRLQELK-NLFVSALKEKSRTQVNDNLHNARARYKGDVLKVVRHISLALCKSSEPDSLIGLQKWVLITFSSLLGDENQSFNECGP---------------VAPLSWIRGLVFQARGEYENAAAHFTHLLQTEELLSSLDSDGIQFVIARIIESYTAISDW 3499 +W V E +++CIA RL++ G QTF E++LL QL+ ++ D +++LL F+ES++K +++ GSV++ + + FFR N +VCEDWF+RI ++ A + +I++ +LR+Q+++ N FV L + A ++ + + H++ AL + +E +SL GL W I ++ + N + L W++G++ +++ ++E + + LL +L S +S FV+ +II+SY IS++ Sbjct: 757 FWTVWECSKFCIANRLKSPYGSAFQTFEIFEKLLL------QLNKDRRD------------FKKIKILLHFMESMEKLIFSTVNGSVLVQSLNNKETQFFRHNVRVCEDWFSRIRVNLLKASILSSSTPDIIRHASLRVQDIQANRFV--------------LDSNTAHFELEF--CILHLANALQQLNETESLQGLSNWSDINLNNSDNNNNNNNKNNNNNNNSTFFNNGNINKYTLKLPWMKGVILRSKQKFEES---ISSLLSVPPMLES-NSISFPFVLEQIIKSYLDISNF 1014
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: SMG1_DROME (Serine/threonine-protein kinase Smg1 OS=Drosophila melanogaster OX=7227 GN=nonC PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 4.246e-38 Identity = 73/117 (62.39%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 8281 SICRYSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGD 8631 S+ R+ ++ MSM+G+V+GLGDRHLDN+LI+ SGDIVHIDYNVCF+KG+ L+IPE VPFRLTQ + A+G+TGIEG FR CE V+ V+RK ++ LL LLE FV+DPLV+WT D Sbjct: 2082 SVRRFVRCMSVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKGRTLRIPEKVPFRLTQNLVQAMGITGIEGPFRLGCEYVLKVMRKERETLLTLLEAFVYDPLVDWTTND 2198 HSP 2 Score: 156.762 bits (395), Expect = 5.439e-36 Identity = 101/325 (31.08%), Postives = 160/325 (49.23%), Query Frame = 1 Query: 6862 RYSAMMAPIVVALERRLASTSRKPETPHEAWFQEEYKEQLKSATVSFKTPPASSAALGDVWRPFDSIAASLASYQRK---SSISLQDVAPHLALLSSSDVPMPGLEKQMKVPDSDKATDLQGVVTIASFHKQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFXXXXXXXX-XXXXGIRYYSVTPISGRAGLIQWVDNVVSIYSVFKSWQTRLHLAQFSSVGTTSTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPHEVKCKVLIDLMKEVPKHLLYQELWCASEGYKAFSSKMKRYIQ 7824 R++ ++ LE +A TSR PET +E F++ + A + + W + L S + S++ +Q ++P L + + MPGL+ PD D+ V I S V +L TKTKPKK+ GS+GQ+YT+L KG EDL LD RIMQ L N + S + +YSV P+ ++GLI WVD V +++++K WQ R +Q + ++ P R +D+FY K+ P L + ++ RR WP V +VL +L +E P LL +ELWC + + ++R+++ Sbjct: 1783 RFNVWRPQLLADLEALVAVTSRPPETTYERSFRKRF-----DAPIRLTVDALRHRRYPEAWDKLKQLYHILQSNMIRGSGSTLKMQSISPVLCGIGRMRISMPGLDAHG--PDGDQ-------VYIESVESSVCVLPTKTKPKKVAFYGSNGQRYTFLFKGMEDLHLDERIMQFLSISNAIMACRSDAPGNGCYRAHHYSVIPLGPQSGLISWVDGVTPVFALYKKWQQR--RSQVAGNAGAGAVANVP---RRFTDLFYNKLSPLLAKHNMQVSDPRRQWPISVLLQVLDELSQETPNDLLARELWCQAGNAAEWRQSVRRFVR 2088 HSP 3 Score: 98.5969 bits (244), Expect = 1.856e-18 Identity = 81/288 (28.12%), Postives = 138/288 (47.92%), Query Frame = 2 Query: 2648 LAGAWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDVAHLLQ---LDNEQNDGNLSMIGSSGAHLLPMRLLLDFVESLKKNVYNAYEGSVI-LPPATRQSSLFFRANKKVCEDWFTRICEPMMNAGLALHCNDAVIQYCTLRLQELKNLFVSALKEKSRTQVNDNLHNARARYKGDVLKVVRHISLALCKSSEPDSLIGLQKWVLITFSSLLGDENQSFNECGPVAPLSWIRGLVFQARGEYENAAAHFTHLLQTEELLSSLDSDGIQFVIARIIESYTAISDW 3499 LA AW EAARYC+ RLRT +G P +TF E +++ A LL + E++ + + + + LLL F+++L+K +YNA EGS L P +Q + FFR N C+ WF RI ++ + + + VI+Y + + V+ S+TQ D ++ + + +++ +L E DSL GL+ W G +S+ W++ QA G+ E+A A + +L +EL S L+ QFV++++++ + W Sbjct: 849 LAIAWLQF-EAARYCVDQRLRTTVGKPQETFLGFEAIIMRHARLLSGCAKEIERSALDDLSLEELLSMQSNLSLLLGFLDALEKLIYNAAEGSAFALRPPEKQVAAFFRLNNPTCQSWFNRIRIGVVIIAMHVQQPELVIRYA-------QQILVN-----SKTQ--DPTYS----------QAIVYMAWSLVSCQEADSLRGLRLWA-------RGKSCKSYK---------WLKYAADQAAGKRESALAGYRTILAEKELQSELEPHTRQFVVSQMMQCLQDLGQW 1095 HSP 4 Score: 45.0542 bits (105), Expect = 2.763e-8 Identity = 27/98 (27.55%), Postives = 46/98 (46.94%), Query Frame = 2 Query: 5021 ALDGFVDIWWSLRRRRVSLFGHAAHGYIQFLSYSSSHVRHCQMPGSDYVALKEK---NGSYTLRATLFILHILLNYGVELKDTLESALSVVPLLPWQV 5305 ALD + IW + AA Y Q+LS+ S + G V+ +E+ + S + TL +L +++ + L++ LE L P+ PW+V Sbjct: 1551 ALDAILQIWRRAIANTYDYYKDAARSYFQYLSFKSGSGPE-KPEGEGVVSQRERLHVDDSNLVTTTLRLLRLIVKHASGLQEVLEQGLHTTPIAPWKV 1647 HSP 5 Score: 39.2762 bits (90), Expect = 2.763e-8 Identity = 22/59 (37.29%), Postives = 35/59 (59.32%), Query Frame = 3 Query: 5379 WKFLL*EVTPQLFARLSSHPEQVVRKHLEGLLIMLAKQSPCSIVYPTLVDVNAYREKSS 5555 WK ++ PQLF+RL+ H E VRK + LL LAK P +++P +V N ++ ++ Sbjct: 1645 WKVII----PQLFSRLNHH-EPYVRKSVCDLLCRLAKSRPQLVIFPAVVGANREQQDAT 1698
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: SMG1_CAEEL (Serine/threonine-protein kinase smg-1 OS=Caenorhabditis elegans OX=6239 GN=smg-1 PE=1 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 1.683e-37 Identity = 110/365 (30.14%), Postives = 179/365 (49.04%), Query Frame = 1 Query: 6763 DVMRRINVLKEEAARIAENITLSQNEKNKINSARYSAMMAPIVVALERRLASTS-RKPETPHEAWFQEEYKEQLKSA----TVSFKTPPASSAALGDVWRPFDSIAASLASYQRK---SSISLQDVAPHLALLSSSDVPMPGLEKQMKVPDSDKATDLQGVVTIASFHKQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFXX---XXXXXXXXXXGIRYYSVTPISGRAGLIQWVDNVVSIYSVFKSWQTRLHLAQFSSVGTTSTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVIS--RRDWPHEVKCKVLIDLMKEVPKHLLYQELWCASEGYKAFSSKMKRY 7818 ++ +R+++++ E A+ + L+ + KN I R + I L+ T P++ +E F + E L +A +S T P S W PF ++ A+ K + +D++P+LA LS+S VPMPG E + + VV+I+ +QVTIL TKT+PKKLG +GSDG++ +L KGREDL LD R+MQ L+ N L + +Y+V P+ R+GLI+WV+ ++ +++ WQ + + + T P + RPS+M++ I A + I I+ R WP E+ +V L + P L+ +ELW + + S KRY Sbjct: 1604 EMEKRLSLIRTENAKTESALHLTASVKNDIIVKRTQLLTRQIFDVLDELYQQTVIEPPKSKNEEEFVTAFAEVLTNAFQESRISRTTSPEKS------WIPFKNLIANFVHRNSKKGMQTFETEDISPYLASLSNSCVPMPGQE----------SVEFDRVVSISRVARQVTILPTKTRPKKLGFVGSDGKQVAFLFKGREDLHLDERVMQFLRLCNVMLQPGKGKHRQSVAAYQAHHYAVIPLGPRSGLIKWVEGATPMFHIYRKWQ----MKEKALKQATKKNGETVPEIERPSNMYHNMIRLAFADHKIDSSITSDRSKWPAEILEEVFESLTAKTPTDLISRELWMRANDATTWWSVTKRY 1948 HSP 2 Score: 156.377 bits (394), Expect = 5.258e-36 Identity = 74/140 (52.86%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 8290 RYSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGDFHDEAAIGGEERKGMELAVSLSLFAS 8709 RYS S+A MSMVG VLGLGDRHLDN+L+D G +VHIDYN+CFDKG+ L+IPE VPFRLT+ + ALG + + G+FR +C V+ LR +L MLL+ FV+DPLV+WT H+ A G+ LA+ L+++ S Sbjct: 1947 RYSRSLAVMSMVGSVLGLGDRHLDNLLVDLKWGHVVHIDYNICFDKGKNLRIPETVPFRLTRNMRHALGPSEMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDWTS---HEHTATS-----GVSLALQLAVYGS 2078
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: SMG1_CAEBR (Serine/threonine-protein kinase smg-1 OS=Caenorhabditis briggsae OX=6238 GN=smg-1 PE=3 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 2.211e-36 Identity = 107/365 (29.32%), Postives = 177/365 (48.49%), Query Frame = 1 Query: 6763 DVMRRINVLKEEAARIAENITLSQNEKNKINSARYSAMMAPIVVALERRLAST-SRKPETPHEAWFQEEYKEQLKSATVS-----FKTPPASSAALGDVWRPFDSIAASLASYQRK---SSISLQDVAPHLALLSSSDVPMPGLEKQMKVPDSDKATDLQGVVTIASFHKQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFXXXXXXXXXXXXGIR--YYSVTPISGRAGLIQWVDNVVSIYSVFKSWQTRLHLAQFSSVGTTSTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVIS--RRDWPHEVKCKVLIDLMKEVPKHLLYQELWCASEGYKAFSSKMKRY 7818 ++ +R+ ++K E A+ ++ L +K++I S + + I L+ T +PET +E F + E L A + +P AS W PF ++ ++ A K + D++ +LA L S VPMPG E + + VV+IA VTIL TKT+PKKLG +GSDG++ +L KGREDL LD R+MQ L+ N L S + +Y+V P+ R+GLI+WV+ I+ +++ WQ + + + T P + +P++M++ I A I +I+ R WP ++ +V L + P L+ +E+W + A+ + KRY Sbjct: 1596 EMEKRLALIKAENAKTDFSMHLMPKQKDEIISKKTKLLTRQIFDVLDELYEKTIVAQPETENEKEFFNTFSEMLTKAHTESKNNRYNSPEAS-------WAPFKNLVSNFAHRTNKKGMQTFQTADISQYLATLGKSCVPMPGQE----------SVEFDRVVSIARVADNVTILPTKTRPKKLGFIGSDGKQLAFLFKGREDLHLDERVMQFLRLCNVMLQSEKGKSRQIAEYQAHHYAVIPLGPRSGLIKWVEGATPIFHIYRKWQMK----EKALKQATKKNGETVPEIEKPTNMYHNMIRQAFTAHNIDAIIASDRSKWPAQILEEVFDGLCSKTPTDLISREIWMRANDSTAWWAVTKRY 1939 HSP 2 Score: 156.377 bits (394), Expect = 5.757e-36 Identity = 73/140 (52.14%), Postives = 99/140 (70.71%), Query Frame = 1 Query: 8290 RYSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGDFHDEAAIGGEERKGMELAVSLSLFAS 8709 RY+ S+A MSMVG VLGLGDRHLDN+L+D G +VHIDYN+CFDKG+ L+IPE VPFRL++ + ALG + + G+FR +C V+ LR +L MLL+ FV+DPLV+WT HD + G G+ LA+ L+++ S Sbjct: 1938 RYARSLAVMSMVGSVLGLGDRHLDNLLVDLKYGHVVHIDYNICFDKGKILRIPETVPFRLSRNMRHALGPSDMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDWTS---HDNISTSG----GVSLALQLAVYGS 2070
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: ATM_CANAL (Serine/threonine-protein kinase TEL1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=TEL1 PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 2.005e-30 Identity = 67/145 (46.21%), Postives = 93/145 (64.14%), Query Frame = 1 Query: 8281 SICRYSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGDF------HDEAAIGGE-ERKGMELAVSL 8694 S +Y+ +A S+VGH+LGLGDRH +NILID +G+ +HID V FD+G+RL IPE VPFRLT+ I G+TG+EG F+ +CE + VLR NK+ ++ +L+V WDPL WT F DE G + E +G E ++ Sbjct: 2687 SRVKYTHGIATSSIVGHILGLGDRHCNNILIDRSTGEPIHIDLGVAFDQGKRLAIPETVPFRLTRDIVDGFGVTGVEGMFKKSCEHTLRVLRTNKEHIISILDVLRWDPLYSWTLSRFKKRKLQEDETGPGVQPEEEGSEAGTAI 2831
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: ATM_DEBHA (Serine/threonine-protein kinase TEL1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=TEL1 PE=3 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 1.400e-29 Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 8293 YSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWT 8622 Y+ +A SMVGH+LGLGDRH +NIL+D SG+ +HID V FD+G+RL IPE VPFRLT+ I G+TG+ G F +CE VLR+NKD +L +L+V WDPL W+ Sbjct: 2763 YTRGIATTSMVGHILGLGDRHCNNILLDKTSGEPIHIDLGVAFDQGKRLPIPETVPFRLTRDIVDGFGITGVNGVFDKSCEHTYRVLRQNKDHILAILDVLRWDPLYSWS 2872
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: TOR_ORYSJ (Serine/threonine-protein kinase TOR OS=Oryza sativa subsp. japonica OX=39947 GN=TOR PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 3.072e-29 Identity = 65/143 (45.45%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 8293 YSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKG-QRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEW------------TRGDFHDEAAIGGEERKGMEL 8682 Y+ S+A MSMVG++LGLGDRH N+++D SG I+HID+ CF+ R K PE VPFRLT+M+ A+ ++GIEG+FR CE V+ VLR NKD ++ ++E FV DPL+ W G+ H + EE EL Sbjct: 2215 YTRSLAVMSMVGYLLGLGDRHPSNLMLDRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGTFRTTCENVMQVLRTNKDSVMAMMEAFVHDPLINWRLFNFNEVPQVTNYGNAHSHTVVNSEEAANREL 2357 HSP 2 Score: 90.1225 bits (222), Expect = 6.638e-16 Identity = 70/223 (31.39%), Postives = 108/223 (48.43%), Query Frame = 1 Query: 6886 IVVALERRLASTSRKPETPHEAWFQEEYKEQLKSA---TVSFKTPPASSAALGDVW----RPFDSIAASLASYQRKSSISLQDVAPHLALLSSSDVPMPGLEKQMKVPDSDKATDLQGVVTIASFHKQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFXXXXXXXXXXXXGIRYYSVTPISGRAGLIQWVDNVVSIYSVFKSWQ 7533 ++ LE A R PET E F + Y +L A + ++ A L W F I L S +++ L V+P L ++ +PG P +VTI F Q+ ++++K +P+KL I GSDG Y +LLKG EDLR D R+MQL +N L +S T L I+ Y+V P+S +GLI WV N +++++ + ++ Sbjct: 1942 MLAVLEPLHAMLERGPETIKENTFIQAYGHELLEAHECCLKYRAT-GEDAELTKAWDLYYHVFRRIDKQLPSL---TTLDLHSVSPELLECRKLELAVPGT-YSADAP----------LVTIEYFVPQLIVITSKQRPRKLTIHGSDGNDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSRKTSEKDLSIQRYAVIPLSPNSGLIGWVPNCDTLHALIREYR 2149
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Match: ATM_CANGA (Serine/threonine-protein kinase TEL1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=TEL1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.547e-29 Identity = 58/115 (50.43%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 8290 RYSGSVAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGDF 8634 +Y+ VA SMVG++LGLGDRHL+NILID +G+ +HID + FD+G+ LKIPE+VPFRLT+ I G+TG+EG FR CE V+ VL ++ + ++ +L + WDPL W F Sbjct: 2562 KYTKGVATSSMVGYILGLGDRHLNNILIDTTTGEPIHIDLGIAFDQGRLLKIPELVPFRLTRDIIDGFGITGVEGIFRRTCEQVLNVLSRDSEKVMCVLNILKWDPLYSWAVSPF 2676 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23485 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23485_La_Tanjil_v1.0 ID=rna-TanjilR_23485_La_Tanjil_v1.0; Name=rna-TanjilR_23485; organism=Lupinus angustifolius; type=mRNA; length=15265bpback to top protein sequence of rna-TanjilR_23485_La_Tanjil_v1.0 >rna-TanjilR_23485_La_Tanjil_v1.0 ID=rna-TanjilR_23485_La_Tanjil_v1.0; Name=rna-TanjilR_23485_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=3762bpback to top mRNA from alignment at Chr_LG08-CM007368.1:24404311..24419575+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23485_La_Tanjil_v1.0 ID=rna-TanjilR_23485_La_Tanjil_v1.0; Name=rna-TanjilR_23485; organism=Lupinus angustifolius; type=mRNA; length=15265bp; location=Sequence derived from: Chr_LG08-CM007368.1:24404311..24419575+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24404311..24419575+ >rna-TanjilR_23485_La_Tanjil_v1.0 ID=rna-TanjilR_23485_La_Tanjil_v1.0; Name=rna-TanjilR_23485; organism=Lupinus angustifolius; type=CDS; length=11289bp; location=Sequence derived from: Chr_LG08-CM007368.1:24404311..24419575+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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