rna-TanjilR_23483
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI2_ARATH (Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana OX=3702 GN=ARI2 PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 2.619e-84 Identity = 132/159 (83.02%), Postives = 142/159 (89.31%), Query Frame = 2 Query: 1304 WTEHFVVKINEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSCICGQPF 1780
WT HF VKINEGQSKRI CMAHKC +ICDE VVR L+ + PD+AEK++RFLLESYIEDNK VKWCPS PHCGNAIRVEDDELCEVECSCGLQFCFSC S+ HSPCSCVMWELW KKC DESETVNW+TVHTKPCPKCHKPVEKNGGCNLV+C+C Q F
Sbjct: 150 WTGHFTVKINEGQSKRIICMAHKCNAICDEDVVRALVSKSQPDLAEKFDRFLLESYIEDNKMVKWCPSTPHCGNAIRVEDDELCEVECSCGLQFCFSCSSQAHSPCSCVMWELWRKKCFDESETVNWITVHTKPCPKCHKPVEKNGGCNLVTCLCRQSF 308 HSP 2 Score: 288.5 bits (737), Expect = 1.598e-83 Identity = 161/262 (61.45%), Postives = 185/262 (70.61%), Query Frame = 1 Query: 1960 FCCSWVCGGATGRNHTWSSIAGHSCGRYK-DQEKSAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQGKIDISEEKDSKLRDYSWVINGXXXXXXXXXXXXXXYAFAFYMFGDELFKDEMSEAQREIKQNLFEDQQQQLEANVEKISKILEEPFDTFPDDKVMEIRMQIINLSAVIDKLCQKMXXXXXXXXXXXXXXXSFDIGNCHCEF*F*CRYDCIENDLLGSLH-QTHNIAPYRSKGIERASELSVWSNKANNTG 2739
FC W+CG ATGR+HTW+ I+GHSCGR++ D+EK ERAKRDL RYMHYHNRYKAH DS KLE+KL I K+ ISE+++ +L+D+SW NGL RLFRSRRVLSYSY FAFYMFGDELFKDEMS +REIKQNLFEDQQQQLEANVEK+SK LEEPFD F DDKVM+IR+Q+INLS +D LC+ M Y+CIENDLLGSL HNI PYRS GIERAS+ N G
Sbjct: 308 FC--WLCGEATGRDHTWARISGHSCGRFQEDKEKQMERAKRDLKRYMHYHNRYKAHIDSSKLEAKLSNNISKKVSISEKRELQLKDFSWATNGLHRLFRSRRVLSYSYPFAFYMFGDELFKDEMSSEEREIKQNLFEDQQQQLEANVEKLSKFLEEPFDQFADDKVMQIRIQVINLSVAVDTLCENM-------------------------------YECIENDLLGSLQLGIHNITPYRSNGIERASDFYSSQNSKEAVG 536 HSP 3 Score: 105.916 bits (263), Expect = 5.988e-22 Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 633 VLLRPLCTFMQREDLRRVMDMLSVKEQHARTLLIYHCWDVEKLFAVYVDKGISHLFAEAGVTMDKHH---CSDSSFHSLIMCEICMEDVPIDEATGMDCGHCFCNTC 944
V+ + QREDLRRVM++LSVKE HARTLLI++ WDVEKLFAV V+KG LF+ AGVT+ ++ S S S++ C+IC+EDVP + T MDCGH FCN C
Sbjct: 43 VITKESLLAAQREDLRRVMELLSVKEHHARTLLIHYRWDVEKLFAVLVEKGKDSLFSGAGVTLLENQSCDSSVSGSSSMMSCDICVEDVPGYQLTRMDCGHSFCNNC 149
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI1_ARATH (Probable E3 ubiquitin-protein ligase ARI1 OS=Arabidopsis thaliana OX=3702 GN=ARI1 PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.145e-82 Identity = 126/159 (79.25%), Postives = 144/159 (90.57%), Query Frame = 2 Query: 1304 WTEHFVVKINEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSCICGQPF 1780
WTEHF V+INEGQSKRIRCMAH+C +ICDE +VR+L+ +K PD+A K++R+LLESYIEDN+ VKWCPS PHCGNAIR EDD+LCEVECSCGLQFCFSCL + HSPCSC+MWELW KKCRDESET+NW+TVHTK CPKC+KPVEKNGGCNLV CICGQ F
Sbjct: 149 WTEHFTVQINEGQSKRIRCMAHQCNAICDEDIVRSLVSKKRPDLAAKFDRYLLESYIEDNRMVKWCPSTPHCGNAIRAEDDKLCEVECSCGLQFCFSCLCQAHSPCSCLMWELWRKKCRDESETINWITVHTKLCPKCYKPVEKNGGCNLVRCICGQCF 307 HSP 2 Score: 282.337 bits (721), Expect = 2.995e-81 Identity = 157/257 (61.09%), Postives = 192/257 (74.71%), Query Frame = 1 Query: 1963 CCSWVCGGATGRNHTWSSIAGHSCGRYKD-QEKSAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQGKIDISEEKDSKLRDYSWVINGXXXXXXXXXXXXXXYAFAFYMFGDELFKDEMSEAQREIKQNLFEDQQQQLEANVEKISKILEEPFDTFPDDKVMEIRMQIINLSAVIDKLCQKMXXXXXXXXXXXXXXXSFDIGNCHCEF*F*CRYDCIENDLLGSLH-QTHNIAPYRSKGIERASEL-SVWSNK 2724
C W+CGGATG +HT+ SIAGHSCGRY+D +EK ERAKRDL RY HYH+RYKAHTDS KLE KL++TI K+ SE+++ KL+D+SWV NGL RLFRSRRVLSYSYAFA+YMFG+E+FKDEM+ +REIK+NLFEDQQQQLE+NVEK+S+ LEEPFD F +DKVM IR+QIINLS +D LC+KM Y+CIENDLLGSL HNI+PYRSKGIE+A++ + W++K
Sbjct: 306 CFCWLCGGATGSDHTYRSIAGHSCGRYQDDKEKQMERAKRDLNRYTHYHHRYKAHTDSSKLEDKLRDTIHEKVSKSEKRELKLKDFSWVTNGLDRLFRSRRVLSYSYAFAYYMFGEEMFKDEMTPEEREIKKNLFEDQQQQLESNVEKLSQFLEEPFDEFSNDKVMAIRIQIINLSVAVDTLCKKM-------------------------------YECIENDLLGSLQLGIHNISPYRSKGIEQAAQFYASWNSK 531 HSP 3 Score: 122.094 bits (305), Expect = 4.092e-27 Identity = 59/96 (61.46%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 663 QREDLRRVMDMLSVKEQHARTLLIYHCWDVEKLFAVYVDKGISHLFAEAGVTMDKHHCSDSSF--HSLIMCEICMEDVPIDEATGMDCGHCFCNTC 944
QREDL RVM++LS+KE HARTLLI++ WDVEKLFAV+V+KG LF+ AGVT+ + +SSF S + C++CMED+P D T MDCGHCFCN C
Sbjct: 53 QREDLLRVMELLSIKEHHARTLLIHYQWDVEKLFAVFVEKGKDSLFSGAGVTVFDYQYGNSSFPQSSQMSCDVCMEDLPGDHMTRMDCGHCFCNNC 148
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI3_ARATH (Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana OX=3702 GN=ARI3 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.032e-71 Identity = 144/253 (56.92%), Postives = 181/253 (71.54%), Query Frame = 1 Query: 1960 FCCSWVCGGATGRNHTWSSIAGHSCGRYKDQE-KSAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQGK-IDISEEKDSKL-RDYSWVINGXXXXXXXXXXXXXXYAFAFYMFGDELFKDEMSEAQREIKQNLFEDQQQQLEANVEKISKILEEPFDTFPDDKVMEIRMQIINLSAVIDKLCQKMXXXXXXXXXXXXXXXSFDIGNCHCEF*F*CRYDCIENDLLGSLH-QTHNIAPYRSKGIERASEL 2706
FC W+CG ATGR+HT++SIAGHSCGRYKD++ + ERA+RDL RY HYH RYKAH DS KLE KL+++I K + SE KD K+ ++YSWV + ++RLF SRR+LS SY FAFYMFG+ELFKDEMSE +REIK+NLFEDQQQQLE NVEK+SKILEEPFD + +KV+E+ + NL+AV+D LC++M Y+CIEN+LLG + HNIAPYRSKGIE+A+E
Sbjct: 305 FC--WLCGQATGRDHTYTSIAGHSCGRYKDEKVRQLERAQRDLDRYTHYHYRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVFKEYSWVTDAVNRLFISRRILSQSYPFAFYMFGEELFKDEMSEKEREIKKNLFEDQQQQLEGNVEKLSKILEEPFDEYDHEKVVEMMRHLTNLTAVVDNLCKEM-------------------------------YECIENELLGPIQFGNHNIAPYRSKGIEQATEF 524 HSP 2 Score: 235.728 bits (600), Expect = 1.281e-65 Identity = 109/161 (67.70%), Postives = 133/161 (82.61%), Query Frame = 2 Query: 1304 WTEHFVVKINEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDD--ELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSCICGQPF 1780
W HF VKINEG+SKRI CMAH+C +ICDE VVR L+ P++A++Y+RFL+ESY+EDN VKWCPS PHCG+AIR +D ++ EV CSCGLQFCFSCLSE+HSPCSC+MW+LW KKC DESETVNW+TV+TK CPKC KP++K GCNL++C CGQ F
Sbjct: 148 WIGHFTVKINEGESKRILCMAHECKAICDEDVVRKLVS---PELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVGCSCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWITVNTKLCPKCSKPIQKRDGCNLMTCKCGQHF 305 HSP 3 Score: 89.7373 bits (221), Expect = 5.694e-17 Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 612 SDKIYFYVLLRPLCTFMQREDLRRVMDMLSVKEQHARTLLIYHCWDVEKLFAVYVDKGISHLFAEAGVTMDKHHCSDSSFHSLIMCEICME-DVPIDEATGMDCGHCFCNTC 944
S K V+ + Q+E L RVM++LSVKE ARTLLIY+ W+VEKLF+V+ D+G +F+ AG+T+ S + + C++CME D+P + T M+CGH FCN C
Sbjct: 38 STKSTSQVIKKESLVAAQKEILVRVMELLSVKENQARTLLIYYQWNVEKLFSVFADQGKDRMFSCAGLTV--FVPSLVTSKKTMKCDVCMEDDLPSNVMTRMECGHRFCNDC 147
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI4_ARATH (Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana OX=3702 GN=ARI4 PE=5 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 1.814e-69 Identity = 144/257 (56.03%), Postives = 183/257 (71.21%), Query Frame = 1 Query: 1960 FCCSWVCGGATGRNHTWSSIAGHSCGRYKDQE-KSAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQGKIDI-SEEKDSKL-RDYSWVINGXXXXXXXXXXXXXXYAFAFYMFGDELFKDEMSEAQREIKQNLFEDQQQQLEANVEKISKILEEPFDTFPDDKVMEIRMQIINLSAVIDKLCQKMXXXXXXXXXXXXXXXSFDIGNCHCEF*F*CRYDCIENDLLGSL-HQTHNIAPYRSKGIERASELSVWS 2718
FC W+CG ATGR+H++SSIAGHSCGRYK+++ + ERA+RDL RY HYH RYKAH DS KLE KLK++I K + SE KD K+ ++YSW+I+ ++RLFRSRR+LSYSY F FYMFG ELFKD+MS+ +R IK+NLFEDQQQQLE NVE++SKILEEPFD + +KV+E+ + NL+AV+D LC++M Y+CIEN+LLG L HNIAPYRSKGIE+A+E S S
Sbjct: 301 FC--WLCGQATGRDHSYSSIAGHSCGRYKEEKVRQLERAQRDLDRYTHYHYRYKAHIDSLKLEDKLKKSILKKAVLNSETKDQKVFKEYSWIIDAVNRLFRSRRILSYSYPFVFYMFGKELFKDDMSDEERNIKKNLFEDQQQQLEGNVERLSKILEEPFDEYDHEKVVEMMRHLTNLTAVVDNLCKEM-------------------------------YECIENELLGPLISGIHNIAPYRSKGIEQAAEFSASS 524 HSP 2 Score: 234.187 bits (596), Expect = 4.256e-65 Identity = 111/161 (68.94%), Postives = 134/161 (83.23%), Query Frame = 2 Query: 1304 WTEHFVVKINEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIR-VEDD-ELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSCICGQPF 1780
W EHF V+INEG+ KRIRCMA+KC +ICDEA R L+ ++AEK++RFL+ESY+EDN VKWCPS PHCGNAIR ++DD ++ EVECSCGLQFCFSCLSE+HSPCSC+MW+LW KKC DESETVNWMTV+TK CPKC KP++K GCN ++C CGQ F
Sbjct: 146 WKEHFTVRINEGEGKRIRCMAYKCNTICDEA--RQLVS---TELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEVECSCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVNTKLCPKCSKPIQKRDGCNHMTCKCGQHF 301 HSP 3 Score: 83.1889 bits (204), Expect = 5.429e-15 Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 609 HSDKIYFYVLLRPLCTFMQREDLRRVMDMLSVKEQHARTLLIYHCWDVEKLFAVYVDKGISHLFAEAGVTMDKHHCSDSSFHSLIM-CEICM-EDVPIDEATGMDCGHCFCNTC 944
HS + V+ + Q+E L +VM+ LSV E ARTLLI + W+V+KLF+VY D+G LF+ AG+T+ D S M C+ICM ED+ T M+CGH FCN C
Sbjct: 37 HSREPTSQVITKEALVAAQKEVLVKVMEFLSVTENQARTLLIQYQWNVDKLFSVYTDQGKDVLFSRAGLTV-----FDPSLTKKTMKCDICMEEDLSKYAMTRMECGHRFCNDC 145
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI11_ARATH (Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana OX=3702 GN=ARI11 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.691e-28 Identity = 65/161 (40.37%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 1289 YIFTGWTEHFVVKINEGQS-KRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIR--VEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSC 1762
Y T WT + KI +G R++C CY++ + ++ + +K D KY R+ L SY+ED K++KWCPS P C A+ V +V C C +FC++C + HSP C W K +DESE +NW+ TKPCPKC +P+EKN GCN +SC
Sbjct: 160 YCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMIDEVTEKKDKD---KYYRYFLRSYVEDGKKMKWCPS-PGCEYAVEFGVNGSSSYDVSCLCSYKFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILAKTKPCPKCKRPIEKNTGCNHMSC 316
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI1_XENTR (E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis OX=8364 GN=arih1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.339e-27 Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 1304 WTEHFVVKI-NEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSC 1762
W+E+ KI EG + I C AH C + D+ V L+ + KY+ + S++E N+ +KWCP AP C + ++V+ + V C CG QFCF+C H P C + W KKC D+SET NW+ +TK CPKCH +EK+GGCN + C
Sbjct: 184 WSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKL--KYQHLITNSFVECNRLLKWCP-APDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 334
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI1_MOUSE (E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus OX=10090 GN=Arih1 PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.667e-27 Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 1304 WTEHFVVKI-NEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSC 1762
W+E+ KI EG + I C AH C + D+ V L+ + KY+ + S++E N+ +KWCP AP C + ++V+ + V C CG QFCF+C H P C + W KKC D+SET NW+ +TK CPKCH +EK+GGCN + C
Sbjct: 210 WSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKL--KYQHLITNSFVECNRLLKWCP-APDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 360
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI1_BOVIN (E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus OX=9913 GN=ARIH1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.667e-27 Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 1304 WTEHFVVKI-NEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSC 1762
W+E+ KI EG + I C AH C + D+ V L+ + KY+ + S++E N+ +KWCP AP C + ++V+ + V C CG QFCF+C H P C + W KKC D+SET NW+ +TK CPKCH +EK+GGCN + C
Sbjct: 210 WSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKL--KYQHLITNSFVECNRLLKWCP-APDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 360
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI1_HUMAN (E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens OX=9606 GN=ARIH1 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.791e-27 Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 1304 WTEHFVVKI-NEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSC 1762
W+E+ KI EG + I C AH C + D+ V L+ + KY+ + S++E N+ +KWCP AP C + ++V+ + V C CG QFCF+C H P C + W KKC D+SET NW+ +TK CPKCH +EK+GGCN + C
Sbjct: 212 WSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKL--KYQHLITNSFVECNRLLKWCP-APDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 362
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Match: ARI1_XENLA (E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis OX=8355 GN=arih1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.131e-27 Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 2 Query: 1304 WTEHFVVKI-NEGQSKRIRCMAHKCYSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCVMWELWAKKCRDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSC 1762
W E+ KI EG + I C AH C + D+ V L+ + KY+ + S++E N+ +KWCP AP C + ++V+ + V C CG QFCF+C H P C W KKC D+SET NW+ +TK CPKCH +EK+GGCN + C
Sbjct: 184 WGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKL--KYQHLITNSFVECNRLLKWCP-APDCHHVVKVQYPDAKPVHCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 334 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23483 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23483_La_Tanjil_v1.0 ID=rna-TanjilR_23483_La_Tanjil_v1.0; Name=rna-TanjilR_23483; organism=Lupinus angustifolius; type=mRNA; length=3748bpback to top protein sequence of rna-TanjilR_23483_La_Tanjil_v1.0 >rna-TanjilR_23483_La_Tanjil_v1.0 ID=rna-TanjilR_23483_La_Tanjil_v1.0; Name=rna-TanjilR_23483_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=554bpback to top mRNA from alignment at Chr_LG08-CM007368.1:24425298..24429045- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23483_La_Tanjil_v1.0 ID=rna-TanjilR_23483_La_Tanjil_v1.0; Name=rna-TanjilR_23483; organism=Lupinus angustifolius; type=mRNA; length=3748bp; location=Sequence derived from: Chr_LG08-CM007368.1:24425298..24429045- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24425298..24429045- >rna-TanjilR_23483_La_Tanjil_v1.0 ID=rna-TanjilR_23483_La_Tanjil_v1.0; Name=rna-TanjilR_23483; organism=Lupinus angustifolius; type=CDS; length=1665bp; location=Sequence derived from: Chr_LG08-CM007368.1:24425298..24429045- (Lupinus angustifoliusback to top |