rna-TanjilR_23462
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: BZP44_ARATH (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.864e-51 Identity = 78/130 (60.00%), Postives = 99/130 (76.15%), Query Frame = 1 Query: 76 LMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEELSHRLESLNEIIDYLNASTGVFGSAAASTMGNFDIGPSDSFFNPMDMAYMNMPIMASA 465 L+D+RKRKR SNRESARRSRMRKQKHLDDL +QV LRKEN QI+ + +TTQ Y+++EAEN +LRAQV EL+HRL+SLNEI+D++ +S+ FG + G FD G D NPM++ + N PIMASA Sbjct: 37 LIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVESSSSGFG--METGQGLFDGGLFDGVMNPMNLGFYNQPIMASA 164
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: BZP11_ARATH (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.894e-49 Identity = 83/141 (58.87%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 73 ALMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEELSHRLESLNEIIDYLNAS----TGVFGSAAASTMGNFDIGPSDSFFNPMDMAY-MNMPIMASADMLQY 480 +LM+QRKRKRMLSNRESARRSRM+KQK LDDL +QV+ L+KEN +I+TSV+ITTQ Y++VEAENSVLRAQ++EL+HRL+SLN+II++L++S G + +G + D F N M+M+Y MN P+MAS+D L Y Sbjct: 22 SLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNNNNMGMCSNPLVG---LECDDFFVNQMNMSYIMNQPLMASSDALMY 159
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.350e-42 Identity = 76/146 (52.05%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 64 DLVALMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEELSHRLESLNEIIDYLNASTGVFGSAAASTMGNFD---IGPSDSFFNPMDM----------AYMNMPIMAS 462 D V +D+RKRKRMLSNRESARRSRMRKQKH+DDL +Q++QL +N+QIL S+ +T+Q YM ++AENSVL AQ+EELS RL+SLNEI+D + ++ FG G FD +G D +++ M+M Y N PIMA+ Sbjct: 23 DSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGAGFGVDQIDGCG-FDDRTVGI-DGYYDDMNMMSNVNHWGGSVYTNQPIMAN 166
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.721e-28 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 70 VALMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEELSHRLESLNEIIDYLNASTGVFGSAAASTMGNFDIGP-SDSFFNPMDMAYMNMPIMASADML 474 + D+RKRKRM+SNRESARRSRMRKQK L DL+++V L+ +N +I V+ +++Y+ +E++N+VLRAQ EL+ RL SLN +++ + +G DI +S NP M PI ASADM Sbjct: 19 ATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQA----------LDIPEIPESMQNPWQMPCPMQPIRASADMF 144
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: OCS1_MAIZE (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.344e-22 Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 85 QRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEELSHRLESLNEIIDYLNASTGVFGSAAASTMGNFDIGPS-DSFFNPMDMAY--MNMPIMASADMLQY 480 R+ KR LSNRESARRSR+RKQ+HLD+LV +V +L+ +N ++ QY VE EN+VLRA+ EL RL S+NE++ + +GV M + P+ D P + Y MP M + ML Y Sbjct: 25 HRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQADNARVAARARDIASQYTRVEQENTVLRARAAELGDRLRSVNEVLRLVEEFSGV-------AMDIQEEMPADDPLLRPWQLPYPAAAMP-MGAPHMLHY 151
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: RSBZ4_ORYSJ (bZIP transcription factor RISBZ4 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ4 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 3.182e-15 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 79 MDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEEL 294 +D ++ +RM+SNRESARRSR RKQ HL DL SQVDQLR EN + + QQ+ + +N +L++ VE L Sbjct: 121 LDVKRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRGENASLFKQLTDANQQFTTSVTDNRILKSDVEAL 192
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: RSBZ3_ORYSJ (bZIP transcription factor RISBZ3 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ3 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.555e-15 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 79 MDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEEL 294 +D ++ +RM+SNRESARRSR RKQ HL DL +QVDQLR EN + + QQ+ + +N +L++ VE L Sbjct: 140 LDVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDANQQFTTAVTDNRILKSDVEAL 211
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: BZP43_ARATH (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.735e-14 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 58 EEDLVALMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEEL 294 EE+ ++++RK+KR +SNRESARRSRMRKQ+ +D+L SQV LR EN Q+L +N + V EN L+ + EL Sbjct: 62 EENHKEIINERKQKRKISNRESARRSRMRKQRQVDELWSQVMWLRDENHQLLRKLNCVLESQEKVIEENVQLKEETTEL 140
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: BZIP1_ARATH (Basic leucine zipper 1 OS=Arabidopsis thaliana OX=3702 GN=BZIP1 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.452e-12 Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 79 MDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLR---KENQQILTSVNITTQQYMSVEAENSVLRAQVEELSHRLESLNEII--DYLNASTGVFGSAAASTMGNFDIGPSDSFFNPMDMAYMNMPIMAS 462 +D++KRKR LSNRESARRSR++KQK ++D + ++ L KEN + +V Q+ SVE EN+ LR++ LS + L +I L + G N I D P ++ ++ MAS Sbjct: 13 IDEKKRKRKLSNRESARRSRLKKQKLMEDTIHEISSLERRIKENSERCRAVK---QRLDSVETENAGLRSEKIWLSSYVSDLENMIATTSLTLTQSGGGDCVDDQNANAGIAVGDCRRTPWKLSCGSLQPMAS 142
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana OX=3702 GN=BZIP9 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.390e-10 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 82 DQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVEEL 294 D ++ +RM SNRESA+RSR RKQ++L DL +QVD L+ +N + + TQQ+ S N VL++ VE L Sbjct: 120 DLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVETL 190 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23462 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23462_La_Tanjil_v1.0 ID=rna-TanjilR_23462_La_Tanjil_v1.0; Name=rna-TanjilR_23462; organism=Lupinus angustifolius; type=mRNA; length=483bpback to top protein sequence of rna-TanjilR_23462_La_Tanjil_v1.0 >rna-TanjilR_23462_La_Tanjil_v1.0 ID=rna-TanjilR_23462_La_Tanjil_v1.0; Name=rna-TanjilR_23462_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=160bpback to top mRNA from alignment at Chr_LG08-CM007368.1:24555973..24556455+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23462_La_Tanjil_v1.0 ID=rna-TanjilR_23462_La_Tanjil_v1.0; Name=rna-TanjilR_23462; organism=Lupinus angustifolius; type=mRNA; length=483bp; location=Sequence derived from: Chr_LG08-CM007368.1:24555973..24556455+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:24555973..24556455+ >rna-TanjilR_23462_La_Tanjil_v1.0 ID=rna-TanjilR_23462_La_Tanjil_v1.0; Name=rna-TanjilR_23462; organism=Lupinus angustifolius; type=CDS; length=483bp; location=Sequence derived from: Chr_LG08-CM007368.1:24555973..24556455+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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