rna-TanjilR_23390
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SCL3 PE=1 SV=1) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 285/442 (64.48%), Postives = 363/442 (82.13%), Query Frame = 1 Query: 46 REVKFEERXXXXXXXXXXXXXXXXXXXIENANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNST--RMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHWKKEILDQVAHKLIEEAEKLDIPFQFNPIVSKLENLDFNKLRVKTGEALAISSILQLHSFLALDNEAMQRKSPL-LLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQSNGCEGYRMREENGCVLICWQDRSLFSISAWRSMK 1362 +++K EERGL LIHLLL ANHVA+G+++NAN EQ+S LASP GDTMQRIAAYF+EALA+RILKSWPG++KA+N+T R +SEEI V +LF+E+FP LKV+++LTN+AILEAM+GEKM+H+IDL+A+EPAQW+AL QA ++RPEGPPHLRITGVH +KE+L+Q+AH+LIEEAEKLDIPFQFNP+VS+L+ L+ +LRVKTGEALA+SS+LQLH+FLA D++ M++ L N+ + V L RVL MS + + E D++N+ SP S+S LPL +S + FLNA+ L PK+M+VTEQDS+HNG +LMERLLE+LYTYAALFDCLE+ V RTS +R++VEKMLFGEEIKNI++CEG ER+ERHEKL+KW QR DLAGF NVPLSY MLQA R LQ G +GYR++EE+GC +ICWQDR L+S+SAWR K Sbjct: 43 KDLKPEERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHGSAAEARENDMSNNNGYSPSGDSASSLPLPSSG--RTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAWRCRK 482
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana OX=3702 GN=RGL1 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.534e-64 Identity = 132/409 (32.27%), Postives = 206/409 (50.37%), Query Frame = 1 Query: 136 ANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHWKKEILDQVAHKLIEEAEKLDIPFQFNPI-VSKLENLDFNKLRVKTG-EALAISSILQLHSFLALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQ-SNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 A+ + + + LLAS M+++A YF+E LA RI + +P A++S S+ + +H FYE P+LK A NQAILE + +H+IDL QW AL QAL+ RP GPP R+TG+ + + +V KL + A + + F+F I ++ L +L L ++ G E++A++S+ + LHR+L ++ +++KFL+ ++ + P IM V EQ++NHNG ++R E+L+ Y++LFD LE S+ + + ++ G +I N+VACEG +R ERHE L++W RF L GF V + QAS L G +GY + E GC+L+ WQ R L + SAWR Sbjct: 171 ADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDVALSS-----FSDTLQIH--FYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFE---------------------------LHRLL-----------------------------------AHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRV----MSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.863e-59 Identity = 123/412 (29.85%), Postives = 205/412 (49.76%), Query Frame = 1 Query: 136 ANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGV------HWKKEILDQVAHKLIEEAEKLDIPFQFNPIVSKLENLDFNKLRVKTGEALAISSILQLHSFLALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQSNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 A+ + E++ + S +G+ +QR+ AY E L ++ S I+KA+N +E + + YE+ P+ K ++ N AI EAMK E +HIID + +QW+ L QA +ARP GPP +RITG+ + + L V ++L + A++ ++PF+FN + + + L V+ GEALA++ LH + +E++ ++ H R+L M +S L PK++ + EQ+SN N + R +E + YAA+F+ ++ T+ R +R+ VE+ ++ NI+ACEG++R ERHE L KW RF +AGF+ PLS L + + L N + YR+ E +G + + W R L + AW+ Sbjct: 138 AHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHH---MPDESVSTEN----------HRDRLLRMVKS---------------------------------------------LSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPL-VNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: SLR1_ORYSI (DELLA protein SLR1 OS=Oryza sativa subsp. indica OX=39946 GN=SLR1 PE=3 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 5.283e-59 Identity = 134/423 (31.68%), Postives = 199/423 (47.04%), Query Frame = 1 Query: 136 ANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHWKK----EILDQVAHKLIEEAEKLDIPFQFNPIVSKLENLDFNKLRVKTGEALAISSILQLHSF-LALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTS-----------LERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQ-SNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 A + +QI LA+ G M+++AAYF EALA R+ + P +ST + ++L H FYE P+LK A NQAILEA G + +H++D + QW AL QAL+ RP GPP R+TGV + + L QV KL + A + + FQ+ +V+ +++ L F L + EA + P ++ + LHR+L + +EK L + + P+I+ V EQ++NHN S ++R E+L+ Y+ +FD LE S + + ++ G +I N+VACEG+ER ERHE L +W R AGF V L QAS L G +GYR+ E+ GC+ + W R L + SAWR Sbjct: 260 AEALVKQIPTLAASQGGAMRKVAAYFGEALARRVYRFRP-----ADSTLLDAAFADLL-HAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA--------------------ATLADLEPFMLQPEGEADANEEPEVIAVNSVFELHRLL-----------------------------------AQPGALEKVLGTVHAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAWR 621
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays OX=4577 GN=D8 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.146e-58 Identity = 132/423 (31.21%), Postives = 201/423 (47.52%), Query Frame = 1 Query: 136 ANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHWKK----EILDQVAHKLIEEAEKLDIPFQFNPIVSKLENLDFNKLRVKTGEALAISSILQLHSFLALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLE------------STVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQ-SNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 A + +QI +LAS G M+++AAYF EALA R+ + P +S+ + ++L H FYE P+LK A NQAILEA G + +H++D + QW AL QAL+ RP GPP R+TGV + + L QV KL + A + + FQ+ +V+ +++ L F+ P ++ + LHR+L + +EK L +R + P+I+ V EQ++NHN + ++R E+L+ Y+ +FD LE S + +++ E L G +I N+VACEG+ER ERHE L +W R +GF+ V L QAS L G +GYR+ E++GC+ + W R L + SAWR Sbjct: 262 AEALVKQIPMLASSQGGAMRKVAAYFGEALARRVYRFRP----PPDSSLLDAAFADLL-HAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA--------------------ATLADLEPFMLQPEGDDTDDEPEVIAVNSVFELHRLL-----------------------------------AQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYL-GRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR 623
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare OX=4513 GN=SLN1 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.677e-58 Identity = 133/429 (31.00%), Postives = 201/429 (46.85%), Query Frame = 1 Query: 127 IENANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHWKK----EILDQVAHKLIEEAEKLDIPFQFNPIVSKLENLDFNKLRVKTGEALAISSILQLHSF-LALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLR--------------VEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQ-SNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 + A + +QI LLA+ G M+++AAYF EALA R+ + P +S+ + ++L H FYE P+LK A NQAILEA G + +H++D + QW AL QAL+ RP GPP R+TGV + + L QV KL + A + + FQ+ +V+ +++ L F L + E + P ++ + +HR+L + +EK L +R + P+I+ V EQ++NHN S ++R E+L+ Y+ +FD LE S E + ++ G +I N+VACEG+ER ERHE L +W R AGF V L QAS L G +GY++ E+ GC+ + W R L + SAWR Sbjct: 246 LSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRVFRFRP----QPDSSLLDAAFADLL-HAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA--------------------ATLADLEPFMLQPEGEEDPNEEPEVIAVNSVFEMHRLL-----------------------------------AQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVYLGRQICNVVACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAWR 614
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 3.194e-58 Identity = 129/398 (32.41%), Postives = 197/398 (49.50%), Query Frame = 1 Query: 166 LASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVH-KLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHWKKEILDQVAHKLIEEAEKLDIPFQFNPIVSKLENLDFNKLRVKTGEALAISSILQLHSFLALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQAS-RFLQSNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 + S +G+ +QR+ AY E L R+ S I+K++ S S E L + + +E+ P+ K ++ N AI EAMK E+ IHIID + +QWIAL QA +ARP G P++RITGV +L V +L + A+K D+PF+FN + ++ L V+ GEAL ++ LH L +E++ ++ H R+L M +S L PK++ + EQ+ N N + R LE L Y A+F+ ++ + R ER+ +E+ ++ NI+ACEG+ER ERHE L KW RF +AGF PLS ++ A+ R L + GY + E +G + + W DR L S AW+ Sbjct: 79 MVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPE--SYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVG-DGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHH---LPDESVSMEN----------HRDRLLRMVKS---------------------------------------------LSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLS--SIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris OX=3711 GN=RGA1 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.535e-58 Identity = 138/413 (33.41%), Postives = 204/413 (49.39%), Query Frame = 1 Query: 136 ANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHW----KKEILDQVAHKLIEEAEKLDIPFQFNPIVS-KLENLDFNKLRVKTGEALAISSILQLHSFLALDNEAMQRKSPLLLNSTNRV-HLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQ-SNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 A + +QI LA M+++A YF+EALA RI + P + +S +S+ + +H FYE P+LK A NQAILEA +G+K +H+ID + + QW AL QAL+ R GPP R+TG+ + L +V KL + AE + + F++ V+ L +LD +S+L+L R S + N V LH++L + +EK ++++ P I V EQ+SNHNG ++R E+L+ Y+ LFD LE S S +++ E L G++I N+VACEG +R ERHE L +W RF +GF+ L QAS L NG EGYR+ E NGC+++ W R L + SAW+ Sbjct: 227 AEALVKQIGFLAVSQAGAMRKVATYFAEALARRIYRLSPPQTQIDHS-----LSDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLTGIGPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLD--------------ASMLEL------------RPSETEAVAVNSVFELHKLL-----------------------------------GRTGGIEKVFGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGAPS--SQDKVMSEVYL-GKQICNLVACEGPDRVERHETLSQWSNRFGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAWK 568
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana OX=3702 GN=RGL3 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 8.380e-58 Identity = 135/410 (32.93%), Postives = 206/410 (50.24%), Query Frame = 1 Query: 136 ANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPGIHKAVNSTRMTMISEEILVHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVH--WKKEILDQVAHKLIEEAEKLDIPFQFNPIVS-KLENLDFNKLRVKTGEALAISSILQLHSFLALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQ-SNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 A+ + +++ LLA+ M ++A YF+EALA RI + IH + + + EEIL FY+ P+LK A NQAILEA+ +++H+IDL + QW AL QAL+ RP GPP R+TGV +E + ++ KL + A+ + + F+FN + + +L +L+ + +T L++NS LH VL S ++EK L ++ + P ++ V EQ++NHNG ++R EAL+ Y++LFD LE V S +R+ E L G +I N+VA EGS+R ERHE L +W +R AGF V L QAS L S G +GYR+ E +G +++ WQ + L + SAW+ Sbjct: 176 ADALVKRVGLLAASQAGAMGKVATYFAEALARRIYR----IHPSAAAIDPSF--EEILQMN-FYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRT------------------------ESETLVVNSV--FELHPVL-----------------------------------SQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYL-GRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWK 516
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana OX=3702 GN=RGL2 PE=1 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 1.066e-57 Identity = 136/418 (32.54%), Postives = 208/418 (49.76%), Query Frame = 1 Query: 136 ANIIFEQISLLASPAGDTMQRIAAYFSEALADRILKSWPG---IHKAVNSTRMTMISEEIL-VHKLFYELFPFLKVAFVLTNQAILEAMKGEKMIHIIDLNAAEPAQWIALFQALSARPEGPPHLRITGVHWKK----EILDQVAHKLIEEAEKLDIPFQFNPIVSK-LENLDFNKLRVKT-GEALAISSILQLHSFLALDNEAMQRKSPLLLNSTNRVHLHRVLPMSQSTFRDLFEKDIANXXXXXXXXXXXXXXXXIASNSMNMEKFLNALRRLIPKIMIVTEQDSNHNGLSLMERLLEALYTYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIVACEGSERKERHEKLDKWFQRFDLAGFSNVPLSYLGMLQASRFLQ--SNGCEGYRMREENGCVLICWQDRSLFSISAWR 1353 A+ + +++ LA M ++A YF++ALA RI + + + AVN + EE+L +H FYE P+LK A NQAILEA+ + +H+IDL + QW AL QAL+ RP GPP R+TG+ + + L Q+ KL + A+ + + F+F + ++ L +L+ + E L ++S+ +L HR+L S S +EK LN ++ + P I+ V EQ++NHNG+ ++R EAL+ Y++LFD LE + S S +R+ E L G +I N+VA EGS+R ERHE +W R AGF + L QAS L + G +GYR+ E +GC++I WQ R L + SAW+ Sbjct: 199 ADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAVNPSF-----EEVLEMH--FYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFEL---------------------------HRLLARSGS-----------------------------------IEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYL-GRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATG-DGYRVEENDGCLMIGWQTRPLITTSAWK 545 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23390 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23390_La_Tanjil_v1.0 ID=rna-TanjilR_23390_La_Tanjil_v1.0; Name=rna-TanjilR_23390; organism=Lupinus angustifolius; type=mRNA; length=1365bpback to top protein sequence of rna-TanjilR_23390_La_Tanjil_v1.0 >rna-TanjilR_23390_La_Tanjil_v1.0 ID=rna-TanjilR_23390_La_Tanjil_v1.0; Name=rna-TanjilR_23390_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=454bpback to top mRNA from alignment at Chr_LG08-CM007368.1:25055706..25057070+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23390_La_Tanjil_v1.0 ID=rna-TanjilR_23390_La_Tanjil_v1.0; Name=rna-TanjilR_23390; organism=Lupinus angustifolius; type=mRNA; length=1365bp; location=Sequence derived from: Chr_LG08-CM007368.1:25055706..25057070+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:25055706..25057070+ >rna-TanjilR_23390_La_Tanjil_v1.0 ID=rna-TanjilR_23390_La_Tanjil_v1.0; Name=rna-TanjilR_23390; organism=Lupinus angustifolius; type=CDS; length=1365bp; location=Sequence derived from: Chr_LG08-CM007368.1:25055706..25057070+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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