rna-TanjilR_23348
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: JGB_ARATH (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 2.508e-78 Identity = 149/354 (42.09%), Postives = 218/354 (61.58%), Query Frame = 1 Query: 163 QFSTKCISMPNSHSHRSLAVLSGHVGPVSCLAVCGEFILSASQGRDIIVWQKPDMRFFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSRSSENVFKLVDTLPTTKDYWGKFMKQSNYVQTRRHHKHLWIEHADSISCLTVNN--GLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAING-LAACKGIVYSASADGKIKAWGK--EGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCL-----QASSNRIDGGFMLYSGSLDRSVRVWWV 1194 Q+ST ++P + SL GH+ LA + + + S ++I VW+ +++ F+ F G VKA+V G K+FT HQD +IRVWKVS ++++ K TLPT KD + +K NYV+ ++H LWI+HAD++SCL++N+ GL+YS SWD+T+KVWR++D KCLESI AHDDA+N ++ + IV+S SADG +KAW + +GK H L L + + ++ VS +G VY G SDG V WE ++ K H +AVL + + G + SGSADK I +WKR+ C + V++GH GPVKCL + +S R D +++YSGSLD+SV+VW V Sbjct: 75 QWSTVEENLPQNGLIGSLVREEGHI---YSLAATKDLLYTGSDSKNIRVWK--NLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQE-SAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGIL---KGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTC-LSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGV 418
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: MHCKC_DICDI (Myosin heavy chain kinase C OS=Dictyostelium discoideum OX=44689 GN=mhkC PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.284e-16 Identity = 68/233 (29.18%), Postives = 110/233 (47.21%), Query Frame = 1 Query: 586 CLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGI---VYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVWWVPRXXXXAQVEEENSPATLSTLNQSIIS 1275 C+T ++ +YSGS D + VW +LK + +IKAH +I + G + +A AD +K W ++ +K + E ++ + +Y G +D V W+ +++ V H A+ S+C MG L SGS D+ I +W A G + + GHEG VK L A +N MLYSGS D ++R+W + ++ ++ TL NQ I + Sbjct: 516 CITGDSLRLYSGSNDGQIGVWDAVELKHVTNIKAHGKSIRAVIKRPGFDQNILTAGADSLVKEWDINTQQ---TIKEIKESNE-----VNTIFIQDNLLYTGCNDKTVKVWD----MRSYECVKTLSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNL-ATGTI--LTNFQGHEGWVKTLYAHNN------MLYSGSHDETIRIWDLKTTRCVNTIKCKDRVETLHVTNQGIFA 727 HSP 2 Score: 56.225 bits (134), Expect = 4.036e-7 Identity = 44/165 (26.67%), Postives = 70/165 (42.42%), Query Frame = 1 Query: 175 KCISMPNSHSHRSLAVLSGHVGPVSCLAVCGEFILSASQGRDIIVWQKPDMRFFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSRSS-ENVFKL---VDTLPTTKDYWGKFMKQSNYVQTRRHHKH---LWIEHADSISCLTVNNGLIYSGSWDKTLKVW 648 K + + + S+ + LSGH + + G + S S + I VW F +G VK L + N +++ D IR+W + + N K V+TL T G F +++Q H K+ + SI CL N +++GS LKVW Sbjct: 613 KTVKVWDMRSYECVKTLSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNNMLYSGSHDETIRIWDLKTTRCVNTIKCKDRVETLHVTNQ--GIFAGSGDWLQVFSHDKYENLASLNTRSSILCLWRNQNQLFTGSLASNLKVW 775
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: LIN23_CAEEL (F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans OX=6239 GN=lin-23 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.799e-14 Identity = 57/207 (27.54%), Postives = 97/207 (46.86%), Query Frame = 1 Query: 568 HADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 H S+ CL +N +I SGS D T++VW + +C++++ H +A+ L GI+ + S D I W +D ++ VL GH+ VV D +++ D + W S + + V H + + G + SGS+D I +W + +C + V+ GHE V+C++ RI SG+ D ++VW Sbjct: 261 HTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDI-TIRRVLVGHR---AAVNVVDFDDRYIVSASGDRTIKVW----SMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLW--DIHSGVC-LRVLEGHEELVRCIRFDEKRI------VSGAYDGKIKVW 450 HSP 2 Score: 63.1586 bits (152), Expect = 2.372e-9 Identity = 54/233 (23.18%), Postives = 98/233 (42.06%), Query Frame = 1 Query: 514 KQSNYVQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETK--------AHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 K+ NY TR + + E++ + CL ++ I SG D T+K+W D C + H ++ L ++ S S+D ++ W E C+K ++ + V ++ ++G ++ + S W +VS H AV + ++ S S D+ I +W + L V ++GH + CLQ G ++ SGS D ++R+W Sbjct: 206 KRGNYKMTRINCQS---ENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVET---GECIKTLIHHCEAV-------------LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVW---SMDTLEFVRTLAGHRRGIACLQYR------GRLVVSGSSDNTIRLW 410 HSP 3 Score: 59.3066 bits (142), Expect = 4.143e-8 Identity = 53/212 (25.00%), Postives = 83/212 (39.15%), Query Frame = 1 Query: 220 VLSGHVGPVSCLAVCGEFILSASQGRDIIVWQKPDMRFFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKV--------------SRSSENVFKLVD--TLPTTKDYWGKF--MKQSNYVQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCL 801 +LSGH G V CL I+S S + VW H +V L + T +D I VW + R++ NV D + + D K M +V+T H+ I+CL L+ SGS D T+++W + CL ++ H++ + + + + S + DGKIK W + D L Sbjct: 257 ILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRR-------GIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRAL 461
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: MHCKA_DICDI (Myosin heavy chain kinase A OS=Dictyostelium discoideum OX=44689 GN=mhkA PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 9.049e-14 Identity = 59/209 (28.23%), Postives = 96/209 (45.93%), Query Frame = 1 Query: 568 HADSISCLTVNNGLIYSGSWDKTLKV--WRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 H SI + N+ I++ S D T+KV R + KC+E++ H +N + A + ++S S D IK W K+ +GV + ++ G++++ GG+D + W+ E ++ + H VLS+ +L S S D I IW F C +D + GH V S+ + LYSGS D S++VW Sbjct: 911 HRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKY------IKTLALSGRYLFSGGNDQIIYVWDT----ETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFS--C-IDTLKGHWNSV------SSCVVKDRYLYSGSEDNSIKVW 1100 HSP 2 Score: 68.1662 bits (165), Expect = 8.246e-11 Identity = 68/231 (29.44%), Postives = 102/231 (44.16%), Query Frame = 1 Query: 151 NVNYQFSTKCISMPNSHSHRS-----LAVLSGHVGPVSCLAVCGEFILSASQGRDIIVWQKPDMRFFAKFGHGDGS----VKALVSIGNKVFTAHQDSRIRVWKVSRSS--------EN-VFKLVDT----LPTTKDYWGKFMKQSNY--VQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESI-KAHDDAINGLAACKGIVYSASADGKIKAW 768 N NY F++ + H RS + L GH G V+C+ +++ S S + I VW D+ F + +G +K L G +F+ D I VW S E+ V L T T+KD K SN+ + T + H W +S+S V + +YSGS D ++KVW L L+C+ +I K+H + L + SA+ DG IK W Sbjct: 921 NSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKVW---DLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGH---W----NSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQIISAAFDGSIKVW 1141
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: MHCKB_DICDI (Myosin heavy chain kinase B OS=Dictyostelium discoideum OX=44689 GN=mhkB PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.049e-13 Identity = 63/227 (27.75%), Postives = 99/227 (43.61%), Query Frame = 1 Query: 196 SHSHRSLAVLSGHVGPVSCLAVCGEFILSASQGRDIIVWQKPDMR-FFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSR-----SSENVFKLVDTLPTTKDY------------WGKFMKQSNYVQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGH 822 S + + L GH GPV + +++ S S I VW +R F GH D V ++ +F+ D I+VW + + E+ + V TL + Y W + NY + H K W+ +I L N +YSGS+DKT++VW L L+C +++ HD + + C ++++AS D IK W E + LEGH Sbjct: 489 SQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGH-DKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYT-LKGHTK--WVT---TICILGTN---LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLR----CNTTLEGH 701 HSP 2 Score: 73.1738 bits (178), Expect = 1.403e-12 Identity = 53/202 (26.24%), Postives = 99/202 (49.01%), Query Frame = 1 Query: 589 LTVNNGLIYSGSWDKTLKVW--RLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 L + + L+++G D +++V+ + +++C++++K H+ + + ++S S+D IK W K C+ LEGH ++ K+++ G SD + W+ + + ++H AV ++C+ G +L SGS DK I +W + F C + GH V + G LYSGS D+++RVW Sbjct: 466 LCICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDL---KKLRCI-FTLEGHDKPVHTVLLN---DKYLFSGSSDKTIKVWD----LKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFR--CNY-TLKGHTKWVTTICIL------GTNLYSGSYDKTIRVW 647 HSP 3 Score: 62.7734 bits (151), Expect = 3.408e-9 Identity = 54/205 (26.34%), Postives = 86/205 (41.95%), Query Frame = 1 Query: 208 RSLAVLSGHVGPVSCLAVCGEFILSASQGRDIIVWQKPDMRFFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSRSSENVF-----KLVDTLPT--TKDYWGKF--------MKQSNYVQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAA--CKGIVYSASADGKIKAWG 771 R + L GH PV + + +++ S S + I VW + +VK L G +F+ D I+VW + N K V T+ T Y G + +K T R H W+EH + + + L+++ S D T+K+W L L+C +++ H+ + LA K V S S D I+ WG Sbjct: 533 RCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDR-WVEH------MVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVWG 730
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: WDR5B_ARATH (COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana OX=3702 GN=WDR5B PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.954e-13 Identity = 82/345 (23.77%), Postives = 143/345 (41.45%), Query Frame = 1 Query: 184 SMPNSHSHRSLAVLSGHVGPVSCLAVC--GEFILSASQGRDIIVWQKPDMRFFAKF-GHGDG-SVKALVSIGNKVFTAHQDSRIRVWKVSRSSENVFKLVDTLPTTKDYWGKFMKQSNYVQTRRHHKHLWIEHADSISCLTVN--NGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACK--GIVYSASADGKIKAW-GKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFV-IGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 ++P +R L L GH +SC+ G + SAS + +I+W + ++ GH G S A S + +A D +R+W +RS K++ H + + C+ N + LI SGS+D+T+++W + KC+ IKAH I+ + + ++ SAS DG K W KEG CLK +++ K + + S +GK++ D + + G F K + G ++ SGS D + +W +A L +++ GH V + S + + LD+++R+W Sbjct: 26 NVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD-ARSPYECLKVLR------------------------------GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGT----CLKTLIDD-KSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLE---GHTDAV--ISVSCHPVQNEISSSGNHLDKTIRIW 329
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pof1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.810e-13 Identity = 92/332 (27.71%), Postives = 131/332 (39.46%), Query Frame = 1 Query: 220 VLSGHVGPVSCLAVCGEFILSASQGRDIIVWQKPDMRFFAKF-GHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSRSSENVFKL---VDTLPTTKDYWGKFMKQSNYVQTRRHH----KHLWIE-HADSISCLTV--NNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCL-----QASSNRIDGGFMLYSGSL 1167 VLSGH V CL + + S S I +W + A GH G V L K+ + D IR+W R+SE + L D++ + S + H K + + H ++ + + + GL+ SGS D T+K+W L CL + AH + LA ++S S DG IK W E KK H L G +EG ++ D + G DG V WE + V K H+ V S+ L + SGS D I +W F +S P+ L +S R YS SL Sbjct: 268 VLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSG-VTCLQFDQCKLISGSMDKTIRIWNY-RTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEG-------VWEIAADHLRLISGAHDGVVKVWEA------CECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLW---LFNNAPNESPVSTQSVPISSLNGQRSNSSVQRALSSVPNYSSSL 581 HSP 2 Score: 62.3882 bits (150), Expect = 3.881e-9 Identity = 56/209 (26.79%), Postives = 98/209 (46.89%), Query Frame = 1 Query: 568 HADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLM--GGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 H+D + CL + ++ SGS+D T+++W L+ + + ++ H + L + + S S D I+ W + S C+ +L GH + + + ++ D + G +D V W F K ++ + H V S+ ++ G + SGS D I IW E L S H GPV+ L + +R L+S SLD +++ W Sbjct: 272 HSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIW---NYRTSECI-SILHGH---TDSVLCLTFDSTLLVSGSADCTVKLWH----FSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCL---HTFSAHIGPVQSLALADSR------LFSCSLDGTIKQW 459 HSP 3 Score: 58.5362 bits (140), Expect = 6.395e-8 Identity = 76/293 (25.94%), Postives = 112/293 (38.23%), Query Frame = 1 Query: 310 WQKPDMRFFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSRSSENVFKLVDTLPTTKDYWGKFMKQSNYVQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 W+ R GH DG V L + N + + D+ IR+W ++ F+ V L H+ ++CL + + SGS DKT+++W +C+ + H D++ L ++ S SAD +K W G K + L GH + ++ D G V G D + W S E + AH V S+ L L S S D I W E K C V + GH V + A R L SG+ D V+VW Sbjct: 259 WRHGRCRQVVLSGHSDG-VMCLQLVRNILASGSYDATIRLWNLA-----TFQQVALLEG---------------------------HSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGK-----RITLRGHTGPVNSVRIIRDRG-LVLSGSDDSTIKIW----SLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEK--KKC-VHTLFGHIEGVWEIAADHLR------LISGAHDGVVKVW 499
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: Y2124_NOSS1 (Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=all2124 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.272e-13 Identity = 95/335 (28.36%), Postives = 140/335 (41.79%), Query Frame = 1 Query: 214 LAVLSGHVGPVSCLAVCGE--FILSASQGRDIIVWQKPDMRFFAKFGHGDGSVKALVSI--GNKVFTAHQDSRIRVWKVSRSSENVFKLVDTLPTTKDYWGKFMKQSNYVQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAIN--GLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLM--GGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVWWV 1194 L +GH G V + + I SAS I +WQ+P + G+ V A+ + G+ + TA D I++W S L+ TLP K +G T LI S + DKT+K+WR+ D K L+++ HD+ +N + + SAS D +K W K K L+GH V S DGK + +D + W+ SF L+ AHN V S+ G L S SADK + +W R G L + SGH V +SS DG + + S S D++V++W + Sbjct: 1315 LETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLA-GNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGS-----LLKTLPGNKAIYG--------------------------ISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGK----FKKTLKGH-TDEVFWVSFSPDGKIIASASADKTIRLWD---SFSG-NLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLW-RSHDGHL--LHTFSGHSNVVY---SSSFSPDGRY-IASASEDKTVKIWQI 1601
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: FBXW7_RAT (F-box/WD repeat-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Fbxw7 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.705e-11 Identity = 78/328 (23.78%), Postives = 122/328 (37.20%), Query Frame = 1 Query: 208 RSLAVLSGHVGPV-SCLAVCGEFILSASQGRDIIVWQKPDMRFFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSRSSENVFKLVDTLPTTKDYWGKFMKQSNYVQTRRHHKHLWIEHADSISCLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLMGGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDGGFMLYSGSLDRSVRVW 1188 RS VL GH V +CL CG I+S S + VW + G V + N + + D ++VW + + E + H H ++ C+ ++ + SGS D TL+VW + +CL + H A+ + V S + D +K W E + H L+G + + DG V G D + W+ E + H M L L SG+AD + IW + L + S H+ V CLQ + N F++ S S D +V++W Sbjct: 377 RSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWN-AETGECI-------------------------------HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG-------HTNRVYSLQFDGIHVVSGSLDTSIRVWD----VETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-----FVITS-SDDGTVKLW 655
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Match: MHCKD_DICDI (Myosin heavy chain kinase D OS=Dictyostelium discoideum OX=44689 GN=mhkD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.080e-11 Identity = 51/209 (24.40%), Postives = 90/209 (43.06%), Query Frame = 1 Query: 586 CLTVNNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLAACKGIVYSASADGKIKAWGKEGKKDSHCLKGVLEGHKXXXXXXXXXXXXGKWVYGGGSDGFVIGWEGNGSFENWKLVSETKAHNMAVLSMCLM-GGFLCSGSADKNIGIWKREAFGKLCKVDVISGHEGPVKCLQASSNRIDG-------GFMLYSGSLDRSVRVW 1188 C+ + N + S S+DK +K++ LS KC++S+ AH +I + ++S+S D IK W E C+ G+ + H + G ++ DG + W + ++ + HNMA+ + + G+L S D I I +D IS P+K + ++ G G ++SG D ++VW Sbjct: 750 CIDIENNFLVSCSFDKQIKIYDLSTFKCIKSLNAHGKSIKSIYMSGKYLFSSSNDQSIKIWDLEM---CMCVYGMNDAHD---APITSLRMFGNRLFSASKDGEIKDW----NLSTFQPTTTLDQHNMAITDILVTSNGYLFVSSDDSTIRI-----------ID-ISNQNEPIKIISSTKAHRSGVNSLATDGKRIFSGGCDNLIKVW 936 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_23348 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_23348_La_Tanjil_v1.0 ID=rna-TanjilR_23348_La_Tanjil_v1.0; Name=rna-TanjilR_23348; organism=Lupinus angustifolius; type=mRNA; length=1281bpback to top protein sequence of rna-TanjilR_23348_La_Tanjil_v1.0 >rna-TanjilR_23348_La_Tanjil_v1.0 ID=rna-TanjilR_23348_La_Tanjil_v1.0; Name=rna-TanjilR_23348_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=426bpback to top mRNA from alignment at Chr_LG08-CM007368.1:25300005..25301285+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_23348_La_Tanjil_v1.0 ID=rna-TanjilR_23348_La_Tanjil_v1.0; Name=rna-TanjilR_23348; organism=Lupinus angustifolius; type=mRNA; length=1281bp; location=Sequence derived from: Chr_LG08-CM007368.1:25300005..25301285+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG08-CM007368.1:25300005..25301285+ >rna-TanjilR_23348_La_Tanjil_v1.0 ID=rna-TanjilR_23348_La_Tanjil_v1.0; Name=rna-TanjilR_23348; organism=Lupinus angustifolius; type=CDS; length=1281bp; location=Sequence derived from: Chr_LG08-CM007368.1:25300005..25301285+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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