rna-TanjilR_19831

Transcript Overview
Namerna-TanjilR_19831
Unique Namerna-TanjilR_19831_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length519
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG09-CM007369.1supercontigChr_LG09-CM007369.1:5179655..5180173 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL450Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL572Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR1388Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR1535Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR1186Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR1227Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR1399Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR1006Pisum sativum Cameor genome v1aPisum sativum
anpvR1344Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR1399Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR1148Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR1201Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR1314Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR1318Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR1148Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR1179Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR1245Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR1226Vicia faba cv. Tiffany genome v1.0Vicia faba
anvrvR1145Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR1179Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR1100Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR1341Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR1077Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR1285Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR1289Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR1143Cicer arietinum
ancarR1161Cicer arietinum
anccaR1150Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR1294Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR1336Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR1264Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR1336Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR1330Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR1372Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR1111Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR1163Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR1385Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR1443Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_009778Cajanus cajan Asha genome v1.0Cajanus cajan
PvulFLAVERTChr07.1001588Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058884437.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_07035.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_004493478.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cc_v2.0_07380.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.5g089800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.5g110600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G256400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_05910.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat06G0289300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.08G334300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014659417.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_08G02500.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg32872.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun07g029600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_07274Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun07g029600.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat03G0241300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan02g029200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat3g070960.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_26806Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_10554Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_19831gene-TanjilG_19831_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_19831rna-TanjilR_19831_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_19831_La_Tanjil_v1.0rna-TanjilR_19831_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_19831_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:5179655..5180173rna-TanjilR_19831_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:5179655..5180173Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_19831_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:5179655..5180173rna-TanjilR_19831_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:5179655..5180173Lupinus angustifoliusCDS


Homology
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.049e-72
Identity = 105/171 (61.40%), Postives = 134/171 (78.36%), Query Frame = 1
Query:   10 HDETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXX--XXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            H ETGCQ  E PILC+NNCGFFG AATMNMCSKC+K+M++KQEQ KLAASS+++IVN      GK+ + +   +V V  V+VKT+ A+ +  +   E  +   K + GP+RC+TC+KRVGLTGF+C+CGNL+CAMHRYSDKHDCQ+DYR   +DAIAKANPV+KA+KLDKI
Sbjct:    3 HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.049e-72
Identity = 105/171 (61.40%), Postives = 134/171 (78.36%), Query Frame = 1
Query:   10 HDETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXX--XXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            H ETGCQ  E PILC+NNCGFFG AATMNMCSKC+K+M++KQEQ KLAASS+++IVN      GK+ + +   +V V  V+VKT+ A+ +  +   E  +   K + GP+RC+TC+KRVGLTGF+C+CGNL+CAMHRYSDKHDCQ+DYR   +DAIAKANPV+KA+KLDKI
Sbjct:    3 HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 9.965e-71
Identity = 102/171 (59.65%), Postives = 130/171 (76.02%), Query Frame = 1
Query:   10 HDETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXXXXQ--NKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            H E GCQ  E PILC+NNCGFFG AATMNMCSKC+K+M++K+EQ KLAASS+++IVN    GK   V  S +  V V  V+ KT+  + +  + + E      K K GP+RCATC+KRVGLTGF+C+CGN++CA+HRYSDKH+CQ+DYR   +DAIAKANPV+KA+KLDKI
Sbjct:    3 HKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 2.021e-48
Identity = 89/179 (49.72%), Postives = 116/179 (64.80%), Query Frame = 1
Query:   10 HDETGCQAQ-ERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVE------NIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAE---IXXXXXXXXXXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            HD+TGCQ+  E P LC NNCGFFG AATMNMCSKC+KDML +QEQ    AS+V       NI+        K+   +  +D++ ++V+  T+  +   +   +      +     GPSRC TC KRVGLTGF C+CG+LFC  HRY+D HDC ++Y A  Q+AIAKANPV+KA+KLDKI
Sbjct:    3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNII--------KETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP6 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.907e-42
Identity = 70/174 (40.23%), Postives = 96/174 (55.17%), Query Frame = 1
Query:   13 DETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQ------EQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXXXXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            +ETG    E PILCVNNCGFFG   T NMCSKCY+D +  +      E+  LA+ S   +V   ++G    V     +                          ++  K   +RC +C+K+VGLTGF C+CG  FC+MHRY+D H C +DY+ VG++ IAK NP++KADK+ KI
Sbjct:   11 EETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPLASLSSTPLVTEVTDGGSGSVADGKQV------------------------MEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana OX=3702 GN=SAP4 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.719e-41
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1
Query:   13 DETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXXXXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            +E  C+  E   LCVNNCGFFG +ATMN+CS CY D+ LKQ+Q     S+VE+ ++         V+++ A ++++ T K       I   +      Q      P+RC  C+KRVGLTGF C+CG  FC  HRY + H C +D+++ G++ IAKANP++ A KL KI
Sbjct:    3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVI----APVLENYAAELEIPTTKKTEEKKPIQIPTEQPSPPQR-----PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=SAP1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.751e-40
Identity = 70/171 (40.94%), Postives = 102/171 (59.65%), Query Frame = 1
Query:    4 ESHDETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXXXXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            E +D T     E P LCV  CGFFG  + MN+CSKCY+D+   +EQ   A ++VE  +N   N    Q  +S  I    + V      +  +    S  +  +  K+  +RC +C K+VG+TGF C+CG+ FC  HRY + H+CQ+D++ V ++AIAKANPV+KADK+D+I
Sbjct:    4 EQNDSTSFSPSE-PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLN--PNKPKTQPQQSQEI---TQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.660e-39
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 1
Query:    1 MESHDETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXXXXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
             ++  E      E PILCVNNCGFFG + T NMCSKCY+D +   +   +AA  VE           K    +++    +E  K   + A   A     +++Q   K   +RC +C+K+VGLTGF C+CG  FC+ HRY++ HDC +DY+  G+D IAK NPV+ A+K++KI
Sbjct:    6 WKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEK----------KAFTPASSSKTPLEPAKPDEVPA---AAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana OX=3702 GN=SAP6 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.705e-38
Identity = 75/169 (44.38%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   13 DETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDM-LLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXXXXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            +E  CQ  E   LCVNNCGF G +ATMN+CS CY D+ L +Q+Q     S+VE+ ++ +        + S  I   ++   VK    E  A  S   + QN+ +  P+RC TC+KRVGLTGF C+CG +FC +HRY + H C YD+++ G++ IAKANP++KA KL KI
Sbjct:    3 EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQR-PNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=SAP3 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.351e-38
Identity = 63/160 (39.38%), Postives = 100/160 (62.50%), Query Frame = 1
Query:   37 ERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEIXXXXXXXXXXQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYRAVGQDAIAKANPVIKADKLDKI 516
            + P LC NNCGFFG  AT N+CSKC++D L  QEQ+   +S+ ++ + ++    G     S +          + + A+    +++     +     P RC TC++RVG+TGF C+CG +FC  HRY+++H+C +D++ +G+D IAKANP++KADKL+KI
Sbjct:    8 QEPRLCANNCGFFGSTATQNLCSKCFRD-LQHQEQN---SSTAKHALTQSLAAVGAAASSSVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_19831 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SAP8_ORYSJ1.049e-7261.40Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI1.049e-7261.40Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ9.965e-7159.65Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH2.021e-4849.72Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ6.907e-4240.23Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH1.719e-4141.67Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH4.751e-4040.94Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ1.660e-3940.12Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH1.705e-3844.38Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH3.351e-3839.38Zinc finger A20 and AN1 domain-containing stress-a... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 113..150
e-value: 1.2E-16
score: 71.4
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 113..149
e-value: 1.8E-9
score: 37.6
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 110..153
score: 12.229
IPR002653Zinc finger, A20-typeSMARTSM00259A20_3coord: 15..39
e-value: 1.0E-7
score: 41.6
IPR002653Zinc finger, A20-typePFAMPF01754zf-A20coord: 16..39
e-value: 2.3E-12
score: 46.6
IPR002653Zinc finger, A20-typePROSITEPS51036ZF_A20coord: 12..46
score: 9.809
IPR035896AN1-like Zinc fingerGENE3D4.10.1110.10coord: 88..168
e-value: 5.3E-27
score: 95.6
IPR035896AN1-like Zinc fingerSUPERFAMILY118310AN1-like Zinc fingercoord: 99..167
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 17..55

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_19831_La_Tanjil_v1.0 ID=rna-TanjilR_19831_La_Tanjil_v1.0; Name=rna-TanjilR_19831; organism=Lupinus angustifolius; type=mRNA; length=519bp
ATGGAGTCTCACGATGAGACAGGATGCCAGGCGCAAGAGCGTCCCATACT
TTGCGTTAACAATTGCGGCTTCTTCGGAAGGGCTGCTACCATGAACATGT
GTTCCAAGTGCTACAAGGACATGCTGCTAAAGCAGGAGCAGGACAAACTT
GCTGCATCATCGGTTGAAAACATCGTGAATAGAACATCCAATGGCAAAGG
AAAACAGGTTGTGAAATCAACAGCAATTGATGTACAAGTTGAAACTGTGA
AGGTCAAGACAATCTGCGCTGAGATTTCTGCCGATTCGTCCTCTGGTGAG
AGTTCGCAAAACAAAGCCAAGACAGGTCCCAGCAGATGCGCAACTTGCAA
GAAGCGTGTCGGGTTAACTGGTTTCAGCTGCAAATGTGGAAACCTCTTCT
GTGCAATGCATCGCTATTCTGATAAACATGATTGCCAGTATGATTATAGG
GCTGTCGGGCAGGACGCTATAGCTAAAGCCAACCCCGTAATTAAGGCAGA
TAAGCTTGACAAAATCTAG
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protein sequence of rna-TanjilR_19831_La_Tanjil_v1.0

>rna-TanjilR_19831_La_Tanjil_v1.0 ID=rna-TanjilR_19831_La_Tanjil_v1.0; Name=rna-TanjilR_19831_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=172bp
MESHDETGCQAQERPILCVNNCGFFGRAATMNMCSKCYKDMLLKQEQDKL
AASSVENIVNRTSNGKGKQVVKSTAIDVQVETVKVKTICAEISADSSSGE
SSQNKAKTGPSRCATCKKRVGLTGFSCKCGNLFCAMHRYSDKHDCQYDYR
AVGQDAIAKANPVIKADKLDKI
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mRNA from alignment at Chr_LG09-CM007369.1:5179655..5180173+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_19831_La_Tanjil_v1.0 ID=rna-TanjilR_19831_La_Tanjil_v1.0; Name=rna-TanjilR_19831; organism=Lupinus angustifolius; type=mRNA; length=519bp; location=Sequence derived from: Chr_LG09-CM007369.1:5179655..5180173+ (Lupinus angustifolius
ATGGAGTCTCACGATGAGACAGGATGCCAGGCGCAAGAGCGTCCCATACT TTGCGTTAACAATTGCGGCTTCTTCGGAAGGGCTGCTACCATGAACATGT GTTCCAAGTGCTACAAGGACATGCTGCTAAAGCAGGAGCAGGACAAACTT GCTGCATCATCGGTTGAAAACATCGTGAATAGAACATCCAATGGCAAAGG AAAACAGGTTGTGAAATCAACAGCAATTGATGTACAAGTTGAAACTGTGA AGGTCAAGACAATCTGCGCTGAGATTTCTGCCGATTCGTCCTCTGGTGAG AGTTCGCAAAACAAAGCCAAGACAGGTCCCAGCAGATGCGCAACTTGCAA GAAGCGTGTCGGGTTAACTGGTTTCAGCTGCAAATGTGGAAACCTCTTCT GTGCAATGCATCGCTATTCTGATAAACATGATTGCCAGTATGATTATAGG GCTGTCGGGCAGGACGCTATAGCTAAAGCCAACCCCGTAATTAAGGCAGA TAAGCTTGACAAAATCTAG
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Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:5179655..5180173+

>rna-TanjilR_19831_La_Tanjil_v1.0 ID=rna-TanjilR_19831_La_Tanjil_v1.0; Name=rna-TanjilR_19831; organism=Lupinus angustifolius; type=CDS; length=519bp; location=Sequence derived from: Chr_LG09-CM007369.1:5179655..5180173+ (Lupinus angustifolius
ATGGAGTCTCACGATGAGACAGGATGCCAGGCGCAAGAGCGTCCCATACT
TTGCGTTAACAATTGCGGCTTCTTCGGAAGGGCTGCTACCATGAACATGT
GTTCCAAGTGCTACAAGGACATGCTGCTAAAGCAGGAGCAGGACAAACTT
GCTGCATCATCGGTTGAAAACATCGTGAATAGAACATCCAATGGCAAAGG
AAAACAGGTTGTGAAATCAACAGCAATTGATGTACAAGTTGAAACTGTGA
AGGTCAAGACAATCTGCGCTGAGATTTCTGCCGATTCGTCCTCTGGTGAG
AGTTCGCAAAACAAAGCCAAGACAGGTCCCAGCAGATGCGCAACTTGCAA
GAAGCGTGTCGGGTTAACTGGTTTCAGCTGCAAATGTGGAAACCTCTTCT
GTGCAATGCATCGCTATTCTGATAAACATGATTGCCAGTATGATTATAGG
GCTGTCGGGCAGGACGCTATAGCTAAAGCCAACCCCGTAATTAAGGCAGA
TAAGCTTGACAAAATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000058Znf_AN1
IPR002653Znf_A20
IPR035896AN1-like_Znf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding