rna-TanjilR_24185
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: DI3L2_ARATH (DIS3-like exonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=SOV PE=1 SV=1) HSP 1 Score: 765.763 bits (1976), Expect = 0.000e+0 Identity = 401/757 (52.97%), Postives = 527/757 (69.62%), Query Frame = 2 Query: 1496 VEGDIVAIKIDPLSMWTKMKGPNVTRNNTATPEGFNL-LTKDDKVADNICKGKGKVDA--GFEFAQYRSSPSQNQEDVDRKSTSSRSNHLHEKRYDYEGNASMGSTNHGLASRDTIDGMQCDSFDSLMINSCSEKDVVINAVEKMCMLANSFSSKRPTGRVVSIIERSPRREGIIGHLYMKHCTTFRDISKEDAKKNNNNVSESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLDECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAEELYSKHQKALHANKDLEVHKRCFTGIKFDENAVKSMEGREALSAAALKHRIPHAEILADIATYCNQRKLASRNVKDACDKLFMWVLLKKE 3757 VEGD V IK+DPLS+W KMKG + A PEG N KDDK A + K +D GFE +G + S+ G +++ + S DS + + C +K +AV+K+C + +SF KRPTG+VV+++E+S R+ I+G L +K +++ S K+ ++S+ EY+QL+P DP+FP ++V LP I+ R+ + D +E +LVAAQI DW E S P A I H+FGRGSE++PQ++AIL+QN++C S+F+P +L+ LP VPWEVP +E+Q R DLR+LC+ TIDPSTATDLDDALSV+ LP G +RVG+HIADVSY+VLPETALD+EA+ RSTSVY++QRK+ MLPPLLSEN+GSL+PG DRLA S+L D+N GDV+DRWIGRT+I+SCCKLSY+HAQDIID S++ + +P ++G F+ D+ SVK L EIS L+ KRF NGAL L+N K F DE G+P D + RK SNFLVEEFMLLANMT A +I +AYP +LLRR PEPN RKL++F FC KHG+ LDISSSGQ+ SLE++ LK D V DI+ +YA +PMQLASYFC+G+LKD+ E HYALAVP YTHFTSPLRRYPDIVVHR L A LEAEELYSK ++ ++ + CFTGI F+++A +S+EG+EALS AALKH +P EIL+D+A YCN+RKLA+R V+DACDKL+ W +LK++ Sbjct: 204 VEGDTVVIKLDPLSLWPKMKG--FVTESAAKPEGTNSPPEKDDKKA----RQKNGIDVVEGFE----------------------------------DGFSKNKSSVIGKGAKNGVTPSSPPSLDSCLGSFCEQKGNC-SAVDKLCGILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLDVKGWIHYKE-SDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLPGSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGK--SDVAENGWPALHGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKGSNFLVEEFMLLANMTAAEVISQAYPASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQLQDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELYSKQKQTA-----IDEGRSCFTGIHFNKDAAESIEGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQK 911 HSP 2 Score: 113.235 bits (282), Expect = 1.122e-23 Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 4970 IERRIYYDEVEGLTVGWLENTSTLVLSMSSTNRRACRKGGTNKWRTLDEVALLTCPYNQEVAMDESTIDGELGSRAVNSHTKIDPAFFPLTVRILSTIPVVLHAVGGDDGPLDIGVRLYMSSYF 5341 IERRIYYD++EGL WLE TSTL++ ++ ++GG ++ + E L P VA + + S S ++ PA FPLT+++ STIPVVLHAVGGDDGPLDIG RLYMSSY+ Sbjct: 937 IERRIYYDQIEGLCADWLEATSTLIV-----DKLYSKRGGRGFFKPMKEAVYLVSPCEVCVAKCSALSVHDTESPEAVSIDEVAPAVFPLTIQLFSTIPVVLHAVGGDDGPLDIGARLYMSSYY 1055
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: DI32L_ARATH (Inactive exonuclease DIS3L2 OS=Arabidopsis thaliana OX=3702 GN=SOV PE=2 SV=1) HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0 Identity = 400/757 (52.84%), Postives = 526/757 (69.48%), Query Frame = 2 Query: 1496 VEGDIVAIKIDPLSMWTKMKGPNVTRNNTATPEGFNL-LTKDDKVADNICKGKGKVDA--GFEFAQYRSSPSQNQEDVDRKSTSSRSNHLHEKRYDYEGNASMGSTNHGLASRDTIDGMQCDSFDSLMINSCSEKDVVINAVEKMCMLANSFSSKRPTGRVVSIIERSPRREGIIGHLYMKHCTTFRDISKEDAKKNNNNVSESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLDECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAEELYSKHQKALHANKDLEVHKRCFTGIKFDENAVKSMEGREALSAAALKHRIPHAEILADIATYCNQRKLASRNVKDACDKLFMWVLLKKE 3757 VEGD V IK+DPLS+W KMKG + A PEG N KDDK A + K +D GFE +G + S+ G +++ + S DS + + C +K +AV+K+C + +SF KRPTG+VV+++E+S R+ I+G L +K +++ S K+ ++S+ EY+QL+P DP+FP ++V LP I+ R+ + D +E +LVAAQI DW E S P A I H+FGRGSE++PQ++AIL+QN++C S+F+P +L+ LP VPWEVP +E+Q R DLR+LC+ TIDPSTATDLDDALSV+ LP G +RVG+HIADVSY+VLPETALD+EA+ RSTSVY++QRK+ MLPPLLSEN+GSL+PG DRLA S+L D+N GDV+DRWIGRT+I+SCCKLSY+HAQDIID S++ + +P ++G F+ D+ SVK L EIS L+ KRF NGAL L+N K F DE G+P D + RK SNFLVEEFMLLANMT A +I +AY +LLRR PEPN RKL++F FC KHG+ LDISSSGQ+ SLE++ LK D V DI+ +YA +PMQLASYFC+G+LKD+ E HYALAVP YTHFTSPLRRYPDIVVHR L A LEAEELYSK ++ ++ + CFTGI F+++A +S+EG+EALS AALKH +P EIL+D+A YCN+RKLA+R V+DACDKL+ W +LK++ Sbjct: 204 VEGDTVVIKLDPLSLWPKMKG--FVTESAAKPEGTNSPPEKDDKKA----RQKNGIDVVEGFE----------------------------------DGFSKNKSSVIGKGAKNGVTPSSPPSLDSCLGSFCEQKGNC-SAVDKLCGILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLDVKGWIHYKE-SDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLPGSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGK--SDVAENGWPALHGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKGSNFLVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQLQDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELYSKQKQTA-----IDEGRSCFTGIHFNKDAAESIEGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQK 911 HSP 2 Score: 113.235 bits (282), Expect = 1.113e-23 Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 4970 IERRIYYDEVEGLTVGWLENTSTLVLSMSSTNRRACRKGGTNKWRTLDEVALLTCPYNQEVAMDESTIDGELGSRAVNSHTKIDPAFFPLTVRILSTIPVVLHAVGGDDGPLDIGVRLYMSSYF 5341 IERRIYYD++EGL WLE TSTL++ ++ ++GG ++ + E L P VA + + S S ++ PA FPLT+++ STIPVVLHAVGGDDGPLDIG RLYMSSY+ Sbjct: 937 IERRIYYDQIEGLCADWLEATSTLIV-----DKLYSKRGGRGFFKPMKEAVYLVSPCEVCVAKCSALSVHDTESPEAVSIDEVAPAVFPLTIQLFSTIPVVLHAVGGDDGPLDIGARLYMSSYY 1055
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: DI3L2_HUMAN (DIS3-like exonuclease 2 OS=Homo sapiens OX=9606 GN=DIS3L2 PE=1 SV=4) HSP 1 Score: 383.259 bits (983), Expect = 2.064e-112 Identity = 262/767 (34.16%), Postives = 380/767 (49.54%), Query Frame = 2 Query: 1496 VEGDIVAIKIDPLSMWTKMKGPNVTRNNTATPEGFNLLTKDDKVADNICKGKGKVDAGFEFAQYRSSPSQNQEDVDRKSTSSRSNHLHEKRYDYEGNASMGSTNHGLASRDTIDGMQCDSFDSLMINSC-SEK-----DVVINAVEKMCM----LANSFSSKRPTGRVVSIIERSPRR--EGIIGHLYMKHCTTFRDISKEDAKKNNNNVSESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLP-CVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLD-ECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAEELYSKHQKALHANKDLEVHKRCFTGIKFDENAVKSMEGREALSAAALKHRIPHAEILADIATYCNQRKLASRNVKDACDKLFMWVLLKK 3754 + GD+V +K+ P W +K + + A E + + +C G Q + DV + E ++D S HG+ +DG++ ++ C SEK D + E C+ A S S + + +VV I+E+ R G + L K+ FR +Y P+D + P + V +K+ P+ R T L +I DW E+ + G+ E++P+ + IL + + S+F+ E L CLP +PW +P +E R DLR CIFTIDPSTA DLDDALS + L +GN++VG+HIADVSY+V + LD A R+TSVY++Q+ +PMLP LL E + SLNP D+L S++ + G ++D W GRT+I+SC KLSYEHAQ +I+ I A + P + ++ +V +L+ I+K L+ +RF++GAL LD K+ F LD E G+P + E +ESN LVEEFMLLANM VA I RA+P+ ALLRR P P R L D FC + GL +D SS+G ++ SL Q K +++ + +RPMQ+A YFCSG L+D + HYAL VP YTHFTSP+RR+ D++VHR L A L RE L A + L A +CN R++AS+ V++ LF VL+K+ Sbjct: 106 LNGDLVVVKLLPEEHWKVVKPESNDKETEAAYES--------DIPEELC--------GHHLPQQSLKSYNDSPDV-----------IVEAQFD----GSDSEDGHGITQNVLVDGVK-------KLSVCVSEKGREDGDAPVTKDETTCISQDTRALSEKSLQRSAKVVYILEKKHSRAATGFLKLLADKNSELFR-----------------KYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPT-EKIPAKELPPISPEHSSEEVHQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPA-QFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGY---------------------------------------RERLDMA--------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKE 764
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: DI3L2_XENTR (DIS3-like exonuclease 2 OS=Xenopus tropicalis OX=8364 GN=dis3l2 PE=2 SV=2) HSP 1 Score: 380.178 bits (975), Expect = 9.083e-112 Identity = 218/548 (39.78%), Postives = 308/548 (56.20%), Query Frame = 2 Query: 2117 PTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPC-VPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLD-ECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAEELYSKHQKALHANKDLEVHKRCFTGIKFDENAVKSMEGREALSAAALKHRIPHAEILADIATYCNQRKLASRNVKDACDKLFMWVLLKK 3754 P D + P + V + + P T L I W ++S E ++ G+ E++P+ + IL + + S+F + L CLP +PW +P +E Q R DLRN CIFTIDP+TA DLDDALS + LP+GN+ VG+HIADVSY+V +ALD A R+TSVY++Q+ +PMLP LL E + SLNP DRL S++ I G+++D W GR+VI SC KLSY+HAQ++I+ I + P V + +I +V +L+ I++ L+ +RF +GAL LD K+ F LD E G+P + + ++SN LVEEFMLLANM VA I+R +P+ ALLRR P P + L D FC + GL+LD SSSG +H SL E + +++ + +RPMQ+A YFC+G LKD E HYAL VP YTHFTSP+RR+ D++VHR L A L C +K + E++ A +CN RK AS+ V++ +LF V +K+ Sbjct: 241 PVDHRLPRIYVPLGDCPHDFAIHPE----TYANTLFICSITAWRDDSNFAEGKLMKSLGQAGEIEPETEGILVEYGVDFSDFPDKVLQCLPQDLPWTIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGSALDIMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGEILDEWFGRSVICSCVKLSYDHAQNMINHP-DKKIEQHELPPVSPQHTINEIHQAVLNLHLIAQNLRKQRFDDGALRLDQLKLTFTLDKESGLPQGCYIYQYRDSNKLVEEFMLLANMAVAHHIYRRFPEEALLRRHPPPQTKMLNDLIEFCDQMGLQLDFSSSGTLHKSLNDQFETDEYSAARKEVLTNMCSRPMQMAVYFCTGALKD-ETLFHHYALNVPLYTHFTSPIRRFADVIVHRLLAASL-----------------------GCGPPLKMPK------------------------EVIQKQADHCNDRKTASKRVQELSAELFFSVFVKE 735
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: DI3L2_MOUSE (DIS3-like exonuclease 2 OS=Mus musculus OX=10090 GN=Dis3l2 PE=1 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 4.301e-111 Identity = 221/581 (38.04%), Postives = 322/581 (55.42%), Query Frame = 2 Query: 2018 LYMKHCTTFRDISKEDAKKNNNNVSESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLP-CVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLD-ECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAEELYSKHQKALHANKDLEVHKRCFTGIKFDENAVKSMEGREALSAAALKHRIPHAEILADIATYCNQRKLASRNVKDACDKLFMWVLLKK 3754 L KH I K A KN++ + Y P+D + P + V +K+ P+ R T L +I DW E+ + G+ E++P+ + IL + + S+F+ E L CLP +PW +P E+ R DLR CIFTIDPSTA DLDDAL+ +L +G + VG+HIADVSY+V ++LD A R+TSVY++Q+ +PMLP LL E + SLNP D+L S++ + G +++ W GRT+I+SC KLSY+HAQ +I+ I ++ P + + ++ +V +L+ I+K L+ +RF++GAL LD K+ F LD E G+P + E ++SN LVEEFMLLANM VA IFR +P+ ALLRR P P + L D FC + GL +D+SS+G ++ SL + K +++ + +RPMQ+A YFCSG L+D E + HYAL VP YTHFTSP+RR+ D++VHR L A L E D+E + L A +CN R++AS+ V++ LF VL+K+ Sbjct: 237 LEKKHSRAATGILKLLADKNSDLFKK--YALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDCIFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQSMIENPT-EKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALYFCSGMLQDQE-QFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALGYSE-----------QPDVE------------------------------------PDTLQKQADHCNDRRMASKRVQELSIGLFFAVLVKE 762
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: DI3L2_SCHPO (DIS3-like exonuclease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dis32 PE=1 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 1.208e-93 Identity = 181/464 (39.01%), Postives = 274/464 (59.05%), Query Frame = 2 Query: 2093 ESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAG-DVVDRWIGRTVIQSCCKLSYEHAQDII-----DMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLDECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTL 3466 +S Y IP D + P + + +L + + L + +I W S P + G ++V+ +A+L +N I SS F+ E L+CLP W + +EI+ R DLRN I TIDP TA DLDDA+S L NG Y VG+HIADV+++V P++ALD EA R+T+VY++Q+ +PMLPPLL E + SLNP V+RLA S+ ++ G ++ RW G+TVI++C +L+Y AQ +I D A+G I PK D+ TS+ +L EIS+ L+ RF GA+ +++ ++ F+LDE G+P+ + E+ ++N L+EEFMLLAN +VA I + + + +LLRR P +++ +F F + D SSS + S+ ++R + L ++ + A R + A YFC+GD + + + HYAL+ YTHFTSP+RRYPDI+VHR L Sbjct: 329 KSSYAIFIPKDKRLPFITIHKNDLSDLSGENWIENILKHHDQLFSVEITRWSIYSRYPMGVLGEKLGNITDVEAYTNALLLENGISSSPFSDEVLNCLPPDDWIISHEEIKKRRDLRNELIITIDPETARDLDDAVSCRALDNGTYEVGVHIADVTHFVKPDSALDKEAASRATTVYLVQKAIPMLPPLLCERLCSLNPNVERLAFSVFWKLDSNGKEIGKRWFGKTVIKTCARLAYSEAQGVIEGKSWDDAVGKPIGGTHTPK--------DVETSILTLCEISRKLRKDRFAKGAVEINSTELKFQLDEYGMPNKCEVYEQTDANHLIEEFMLLANRSVAEHISKNFSNNSLLRRHASPKEKQINEFCHFLKSMNFDFDASSSAAFNASMVRLRSTFNEE--LVELFENMAVRSLNRAEYFCTGDFGE-KTDWHHYALSFNHYTHFTSPIRRYPDIIVHRLL 781
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: DI3L2_CAEEL (DIS3-like exonuclease 2 OS=Caenorhabditis elegans OX=6239 GN=disl-2 PE=1 SV=2) HSP 1 Score: 307.76 bits (787), Expect = 8.653e-87 Identity = 191/558 (34.23%), Postives = 285/558 (51.08%), Query Frame = 2 Query: 2105 IQLIPTDPKFPNMMVLVKELPKC-IKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPCVP---WEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYR------VGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLDECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAEELYSKHQKALHANKDLEVHKRCFTGIKFDENAVKSMEGREALSAAALKHRIPHAEILADIATYCNQRKLASRNVKDACDKLFMWVLL 3748 + + TD + P +++ PK + K S E L A+I DW ES + ++ + G E+ + + I++++ I EF+ E L LP W+VP E + R D R+ +FTIDP TA DLDDAL + + + + + +G+HIADV++++ T LD A R S Y+ Q +PMLP +L E + SLNPGVDRL+ S + ++ ++ D W GR+VI+S KL+YEHAQD I+ + D+ P + +I L+ I++VL+ KR +GAL ++ P++ F LDE P + E K+SN LVEEFMLLANM VA I +P+ ALLR P P + ++D A C + G LD +SG + SL + + K + D + ++ S +PMQ A YFC+ ++ + + H+AL V YTHFTSP+RRYPD++VHR L A AL R+P E + +I T CN KLAS+ D L+ V + Sbjct: 226 VLFVATDSRVPRILI-----PKSDVDKEFFSRPKDFERFLYTAKITDWRAESVYADGRLVKLLGMSGEIDTETERIVYEHQIDHREFSDECLESLPITTAENWKVPDAEFEYRRDFRSDIVFTIDPKTARDLDDALHAKHIDDCDGKGTPGLEIGVHIADVTFFLKEGTELDKWASERGNSTYLSQTVIPMLPRILCEQLCSLNPGVDRLSFSTVFKMSYEAELYDVWFGRSVIRSRVKLAYEHAQDFIENP-EKDFTCDELPDISDGNTPFEIKEKTLMLHRIAQVLRQKREDSGALRIELPRLKFALDEDKKPQGVSIYEIKDSNKLVEEFMLLANMEVAKKIAENFPEHALLRNHPPPKEKMIKDVAEQCARIGFPLDGRTSGLLSTSLRKYQGKSRLDMCIRQVISSLTIKPMQQAKYFCTFEMPLSFYH--HFALNVDHYTHFTSPIRRYPDVIVHRQLAA---------------------------------------------ALGYNERSERVP--EEIQEICTRCNDTKLASKEASDESAMLYFGVFI 728
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: RRP44_HUMAN (Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 2.779e-80 Identity = 186/537 (34.64%), Postives = 282/537 (52.51%), Query Frame = 2 Query: 1925 MLANSFSSK--RPTGRVVSIIERSPRREGIIGHLYMKHCTTFRDISKEDAKKNNNNVSESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLD-ECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAE----ELYSKHQKA 3514 ML + S K +PTGRVV II+R+ R +C +SK D K++ ++ P D + P + + ++ T+E + ID W S P H + G E + + + +L ++ + F+ LS LP +PW + K++++R DLR+LCI ++DP TD+DDAL +L NGN VG+HIADVS+++ P ALD E+ R T+VY+ ++++ M+P LLS N+ SL VDRLA S + ++N +++ ++VI S L+Y AQ ID A ++ DI TS++ L +++K+LK +R GAL L +P++ F +D E P D E +E+N +VEEFMLLAN++VA I + + ALLR+ P P + L++ ++ + SL+Q P L ++ ATR M A YFCSG DN+ HY LA P YTHFTSP+RRY D++VHR L + A+ EL KH+ A Sbjct: 329 MLKTAVSEKMLKPTGRVVGIIKRNWR----------PYCGM---LSKSDIKESRRHL-------FTPADKRIPRIRIETRQAS------------TLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMND----------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTF--PYLNTLLRILATRCMMQAVYFCSG--MDNDFH--HYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLA 811
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: RRP44_MOUSE (Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4) HSP 1 Score: 290.426 bits (742), Expect = 3.434e-80 Identity = 187/539 (34.69%), Postives = 285/539 (52.88%), Query Frame = 2 Query: 1913 EKMCMLANSFSSK--RPTGRVVSIIERSPRREGIIGHLYMKHCTTFRDISKEDAKKNNNNVSESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITSVKSLYEISKVLKCKRFINGALWLDNPKIGFRLD-ECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVLEAE----ELYSKHQ 3508 E+ +L + S K RPTGRVV II+R+ R +C +SK D K++ ++ P D + P + + ++ +R+ +VA ID W S P H + G E + + + +L ++ + F+ LS LP +PW + +++++R DLR+LC+ ++DP TD+DDAL +L NGN VG+HIADVS+++ P ALD E+ R T+VY+ ++++ M+P LLS N+ SL VDRLA S + ++N +++ ++VI S L+Y AQ ID A ++ DI TS++ L +++K+LK R GAL L +P+I F +D E P D E +E+N +VEEFMLLAN++VA I + + ALLR+ P P + L++ ++ + SL+ R + P L ++ ATR M A YFCSG DN+ HY LA P YTHFTSP+RRY DI+VHR L + A+ EL KH+ Sbjct: 325 ERELLLKTAVSEKMLRPTGRVVGIIKRNWR----------PYCGM---LSKSDIKESRRHL-------FTPADKRIPRIRIETRQASALEGRRI----------IVA--IDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRIDSAAMND----------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVKAAKSKNLQIKTDTAKSLADSLD--RAESPDFPYLNTLLRILATRCMMQAVYFCSG--MDNDFH--HYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELTDKHK 809
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Match: RP44A_ARATH (Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana OX=3702 GN=RRP44A PE=2 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 9.435e-79 Identity = 170/513 (33.14%), Postives = 274/513 (53.41%), Query Frame = 2 Query: 1952 RPTGRVVSIIERSPRREGIIGHLYMKHCTTFRDISKEDAKKNNNNVSESEYIQLIPTDPKFPNMMVLVKELPKCIKKRVTSGDVTVEMDLVAAQIDDWVEESFLPEAHILHVFGRGSEVQPQLDAILFQNAICSSEFAPEALSCLPCVPWEVPLKEIQS--RIDLRNLCIFTIDPSTATDLDDALSVEKLPNGNYRVGIHIADVSYYVLPETALDSEAQLRSTSVYMLQRKLPMLPPLLSENIGSLNPGVDRLAVSMLLDINLAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDMAIGSNILADDYPKVYGCFELTDIITS-VKSLYEISKVLKCKRFINGALWLDNPKIGFRLD-ECGIPSDSMLSERKESNFLVEEFMLLANMTVAAIIFRAYPDGALLRRQPEPNMRKLRDFAAFCQKHGLKLDISSSGQIHCSLEQMREKLKGDPVLYDIVISYATRPMQLASYFCSGDLKDNEHECCHYALAVPFYTHFTSPLRRYPDIVVHRTLLAVL 3478 RP+GRVV +I R+ + +C + +S + + + D + P + + ++L + R+ +D W +S P H + G+ + + + + +L +N + S F+ + L+CLP +PW V +++ + R DLR+L +F++DP D+DDAL LPNGN+ +G+HIADV+ +V P T LD EA R TSVY+++R++ MLP L+E+I SL V+RLA S++ +++ +++ +++I+S LSY AQ +D + LTD +T+ ++++ ++K+++ +R GAL L + ++ F +D E P + + + E+N +VEEFML AN++VA I + +P +LLRR P P L GL LD+SSS + SL++ + DP ++ ATR M A YFCSGDL E+ HY LA P YTHFTSP+RRY D+ VHR L A L Sbjct: 336 RPSGRVVGVIRRN----------WHSYCGSLEPMSLPAGSGG------TAHALFVSKDRRIPKIRINTRQLQNLLDMRIV------------VAVDSWDRQSRYPSGHYVRPIGKIGDKETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDS-----------------RLTDSLTTDLRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDR---AVGEDPYFNKLIRILATRCMTQAVYFCSGDLSPPEYH--HYGLAAPLYTHFTSPIRRYADVFVHRLLAASL 798 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_24185 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_24185_La_Tanjil_v1.0 ID=rna-TanjilR_24185_La_Tanjil_v1.0; Name=rna-TanjilR_24185; organism=Lupinus angustifolius; type=mRNA; length=5347bpback to top protein sequence of rna-TanjilR_24185_La_Tanjil_v1.0 >rna-TanjilR_24185_La_Tanjil_v1.0 ID=rna-TanjilR_24185_La_Tanjil_v1.0; Name=rna-TanjilR_24185_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=1060bpback to top mRNA from alignment at Chr_LG09-CM007369.1:18206361..18211707- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_24185_La_Tanjil_v1.0 ID=rna-TanjilR_24185_La_Tanjil_v1.0; Name=rna-TanjilR_24185; organism=Lupinus angustifolius; type=mRNA; length=5347bp; location=Sequence derived from: Chr_LG09-CM007369.1:18206361..18211707- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:18206361..18211707- >rna-TanjilR_24185_La_Tanjil_v1.0 ID=rna-TanjilR_24185_La_Tanjil_v1.0; Name=rna-TanjilR_24185; organism=Lupinus angustifolius; type=CDS; length=3183bp; location=Sequence derived from: Chr_LG09-CM007369.1:18206361..18211707- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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