rna-TanjilR_01634
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMTT_ARATH (Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana OX=3702 GN=QUA2 PE=1 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 1.530e-63 Identity = 137/233 (58.80%), Postives = 174/233 (74.68%), Query Frame = 1
Query: 1 MSRPLQRGVTGVRTPXXXXXXXXXXXNWDNRRV-SSDHSPLS---PFRLLFGDNNSHSKYGINENGFASDPFIVGNPXXXXXXXXXXXXXXXVFIVVLALTGSFWWTMSISASSRGHIYHGYRRLQEKLVSDLVDISEFSRGTSKFKELESCSEEHENFVPCFNVSENLALGNSDGNEFDRQCGRELRQNCLVLPPVNYKIPLQWPTGRDVIWIANVKITAEEVLSSGTLTKR 687
MS PLQRG++GVR DS + + R S++++ L+ PF LF + +S G ENGF++DP+ + RSR +LMLLFLK SLV IVV+AL GSFWWT+SIS SSRGH+YH YRRLQE+LVSDL DI E S G +++KELE C+ E ENFVPCFNVSENLALG S+G+E DR CG +Q CL LPPV Y++PL+WPTG+D+IW +NVKITA+EV+SSG++TKR
Sbjct: 1 MSMPLQRGISGVRVSDSSDDLRDSQMKDKTERARSTENNNLTLRFPFGFLFSNQSSSKHGGGGENGFSADPY---SARSRHRLMLLFLKISLVLIVVIALAGSFWWTISISTSSRGHVYHNYRRLQEQLVSDLWDIGEISLGPNRWKELEYCNIESENFVPCFNVSENLALGYSNGDENDRFCGPGSKQECLELPPVKYRVPLRWPTGKDIIWHSNVKITAQEVVSSGSITKR 230 HSP 2 Score: 212.616 bits (540), Expect = 2.281e-56 Identity = 113/204 (55.39%), Postives = 135/204 (66.18%), Query Frame = 2
Query: 2759 VFTTRKSSSAPPLCGKGHDVETPYYRELQNCIGGMQSSRWIPIEKRGKWPSRANLNKNELAVYGICYALQHLIIERFMEVFYYILSY*TNMVVSICLYLNVSGLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
+++RK P +C KGHDVE+PYYR LQ CIGG +S RWIPIE R +WPSR+N+NK EL++YG L + ED+E+W+ VR YWSLLSPLIFSDHPKRPG+EDP PPYNM RNVLDMNA FGG NSALL+ARKS WVMNVVP +G N+LP+I DRGF+GVLH+W
Sbjct: 421 CYSSRKPGVGPSVCTKGHDVESPYYRPLQMCIGGTRSRRWIPIEGRTRWPSRSNMNKTELSLYG---------------------------------------LHPEVLGEDAENWKITVREYWSLLSPLIFSDHPKRPGDEDPSPPYNMLRNVLDMNAQFGGLNSALLEARKSVWVMNVVPTAGPNHLPMILDRGFVGVLHNW 585 HSP 3 Score: 148.288 bits (373), Expect = 3.057e-35 Identity = 69/80 (86.25%), Postives = 71/80 (88.75%), Query Frame = 2
Query: 1400 VQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQK 1639
V+TILDIGCGYGSFGAHL Q+LTMCIANYE SGSQVQLTLERGLPAMI SF SKQLPYPSLSFDMLHC C IDWDQK
Sbjct: 274 VRTILDIGCGYGSFGAHLLSKQILTMCIANYEASGSQVQLTLERGLPAMIGSFISKQLPYPSLSFDMLHCLRCGIDWDQK 353 HSP 4 Score: 78.9518 bits (193), Expect = 2.439e-30 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 3921 GPMHIIVFL*L*FL--VASRCEAFPTYPRTYDLVHAAGLLSLETSQPRR-CTMLDMFIEIDRVLRPE 4112
GP H+ + L F+ + + CE FPTYPRTYDLVHA LLSL+TSQPR+ C ++D+F EIDR+LRPE
Sbjct: 566 GPNHLPMILDRGFVGVLHNWCEPFPTYPRTYDLVHADNLLSLQTSQPRKTCLLIDIFTEIDRLLRPE 632 HSP 5 Score: 78.1814 bits (191), Expect = 2.439e-30 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 4207 QGWVIIRDTIPLIESARALITQLKWEARVIEIESDNDHRLLISQKPFYKKQS 4362
+GWVIIRDT L+E AR ITQLKWEARVIE+ES ++ RLLI QKPF K+QS
Sbjct: 632 EGWVIIRDTAQLVEKARETITQLKWEARVIEVESSSEQRLLICQKPFTKRQS 683 HSP 6 Score: 98.5969 bits (244), Expect = 2.006e-19 Identity = 42/60 (70.00%), Postives = 49/60 (81.67%), Query Frame = 3
Query: 2400 DGILLIEADRLLKPGGYFVWTSPLIKSRNKGDQKRWKFVHDFTENLCWEMLSQQDATVVW 2579
DG+LL+E DR+LKPGGYFVWTSPL RNK KRW FVHDF E++CW +L+QQD TVVW
Sbjct: 354 DGLLLVEIDRVLKPGGYFVWTSPLTNPRNKDHLKRWNFVHDFAESICWTLLNQQDETVVW 413 HSP 7 Score: 69.707 bits (169), Expect = 1.437e-10 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3
Query: 702 YPTFEYIVFCTKIFICG----------YRMMMLDEEQISFRSASHMFDGIEDYSHQIAEMMGLRNESYFIQAGVSTFCD 908
+PT + I++ + + I RMMM++++QISFRSAS M D +EDYSHQIAEM+G++ ++ FI+AGV T D
Sbjct: 202 WPTGKDIIWHSNVKITAQEVVSSGSITKRMMMMEDDQISFRSASPMSDEVEDYSHQIAEMIGIKKDN-FIEAGVRTILD 279
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMT5_ARATH (Probable methyltransferase PMT5 OS=Arabidopsis thaliana OX=3702 GN=At2g03480 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.119e-37 Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 337 HIYHGYRRLQEKLVSDLVDISEFSRGTSKFKELESCSEEHENFVPCFNVSENLALGNSDGNEFDRQCGREL-RQNCLVLPPVNYKIPLQWPTGRDVIWIANVKITAEEVLSSGTLTKR 687
+IY YRR++E+ D +D+ S G S KE C +E E++VPC+N++ NL G +G E DR C E ++ C+V PP +YKIPL+WP GRD+IW NVKIT ++ LSSGT+T R
Sbjct: 55 NIYSNYRRIKEQAAVDYLDLRSLSLGAS-LKEFPFCGKERESYVPCYNITGNLLAGLQEGEELDRHCEFEREKERCVVRPPRDYKIPLRWPLGRDIIWSGNVKITKDQFLSSGTVTTR 171 HSP 2 Score: 58.9214 bits (141), Expect = 1.119e-37 Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 3
Query: 756 RMMMLDEEQISFRSASHM-FDGIEDYSHQIAEMMGLRNESYFIQAGVSTFCD 908
R+M+L+E QI+F S + FDG++DY+ QIAEM+GL +++ F QAGV T D
Sbjct: 171 RLMLLEENQITFHSEDGLVFDGVKDYARQIAEMIGLGSDTEFAQAGVRTVLD 222 HSP 3 Score: 125.946 bits (315), Expect = 3.297e-28 Identity = 57/86 (66.28%), Postives = 68/86 (79.07%), Query Frame = 2
Query: 1400 VQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQKGIFSIL 1657
V+T+LDIGCG+GSFGAHL +L+ +CIA YE +GSQVQL LERGLPAMI +F SKQLPYP+LSFDM+HCA C WD K +L
Sbjct: 217 VRTVLDIGCGFGSFGAHLVSLKLMPICIAEYEATGSQVQLALERGLPAMIGNFFSKQLPYPALSFDMVHCAQCGTTWDIKDAMLLL 302 HSP 4 Score: 121.709 bits (304), Expect = 6.364e-27 Identity = 86/193 (44.56%), Postives = 101/193 (52.33%), Query Frame = 2
Query: 2792 PLCGKGHDVETPYYRELQNCIGGMQSSRWIPIEKRGKWPSRANLNKNELAVYGICYALQHLIIERFMEVFYYILSY*TNMVVSICLYLNVSGLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
PLC G V PYY L CI G S RWI I+ R AV G A L + G ++A++NYWSLL+PLIFSDHPKRPG+EDP PP+NM RNV+DM+A FG N+ALL KSAWVMNVVP++ N LP+I DRGF GVLHDW
Sbjct: 378 PLCKDGDSV--PYYHPLVPCISGTTSKRWISIQNRS-------------AVAGTTSA-----------------------------GLEIHG-------------KSALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMHARFGNLNAALLDEGKSAWVMNVVPVNARNTLPIILDRGFAGVLHDW 513 HSP 5 Score: 63.5438 bits (153), Expect = 2.551e-21 Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 4207 QGWVIIRDTIPLIESARALITQLKWEARVIEIESDNDHRLLISQKPFYKK 4356
+GWV++ D + +IE ARAL +++WEARVI+++ +D RLL+ QKPF KK
Sbjct: 557 EGWVVLSDKVGVIEMARALAARVRWEARVIDLQDGSDQRLLVCQKPFIKK 606 HSP 6 Score: 63.1586 bits (152), Expect = 2.551e-21 Identity = 27/46 (58.70%), Postives = 39/46 (84.78%), Query Frame = 3
Query: 3975 CEAFPTYPRTYDLVHAAGLLSLETSQPRRCTMLDMFIEIDRVLRPE 4112
CE FPTYPRTYD++HA LL+ +S+ RC+++D+F+E+DR+LRPE
Sbjct: 514 CEPFPTYPRTYDMLHANELLTHLSSE--RCSLMDLFLEMDRILRPE 557 HSP 7 Score: 60.4622 bits (145), Expect = 9.850e-8 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 3
Query: 2400 DGILLIEADRLLKPGGYFVWTSPLIKSR-NKGDQKRWKF---VHDFTENLCWEMLSQQDATVVW 2579
D +LL+E DR+LKPGGYFV TSP K++ N D K+ V++ ++ +CW + +QQD T +W
Sbjct: 297 DAMLLLEVDRVLKPGGYFVLTSPTNKAQGNLPDTKKTSISTRVNELSKKICWSLTAQQDETFLW 360
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMT4_ARATH (Probable methyltransferase PMT4 OS=Arabidopsis thaliana OX=3702 GN=At1g13860 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 9.235e-35 Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 337 HIYHGYRRLQEKLVSDLVDISEFSRGTSKFKELESCSEEHENFVPCFNVSENLALGNSDGN-EFDRQCGRELRQNCLVLPPVNYKIPLQWPTGRDVIWIANVKITAEEVLSSGTLTKR 687
+IY Y R++E+ D +D+ FS G ++ KE C +E +N+VPC+NV+E SD N EF R+ + CLV PP +YKIPL+WP GRD+IW NVKIT ++ LSSGT+TKR
Sbjct: 49 NIYSNYGRVKEQAAVDYLDLRFFSLGVNRLKEFPLCGKERDNYVPCYNVTE------SDRNCEFARE-----EERCLVRPPRDYKIPLRWPVGRDIIWTGNVKITKDQFLSSGTMTKR 155 HSP 2 Score: 56.9954 bits (136), Expect = 9.235e-35 Identity = 26/52 (50.00%), Postives = 39/52 (75.00%), Query Frame = 3
Query: 756 RMMMLDEEQISFRSASHM-FDGIEDYSHQIAEMMGLRNESYFIQAGVSTFCD 908
R+M+L+E QI+F S + FDG++DY+ QIAEM+GL +++ F QAG+ T D
Sbjct: 155 RLMLLEENQITFHSDDGLIFDGVKDYAFQIAEMIGLGSDTEFPQAGIRTVLD 206 HSP 3 Score: 143.665 bits (361), Expect = 5.202e-34 Identity = 91/208 (43.75%), Postives = 116/208 (55.77%), Query Frame = 2
Query: 2750 ALPVFTTRKSSSAPPLCGKGHDVETPYYRELQNCIGGMQSSRWIPIEKRGKWPSRAN-LNKNELAVYGICYALQHLIIERFMEVFYYILSY*TNMVVSICLYLNVSGLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
A P + +S ++ P+C D PYY L CI G +S RWIPI+ R SRA+ + +EL ++GI + +EF ED + WR+A++NYWSLL+PLIFSDHPKRPG+EDP PP+ M RN +DMNA +G N ALL KS WVMNVVP+ N LP+I DRGF G LHDW
Sbjct: 348 ADPNCYSSRSQASIPVCK--DDDSVPYYHPLVPCISGTKSKRWIPIQNR----SRASGTSLSELEIHGI---------------------------------------KPEEFDEDIQVWRSALKNYWSLLTPLIFSDHPKRPGDEDPVPPFYMIRNAMDMNARYGNLNQALLNQGKSVWVMNVVPVKARNTLPIILDRGFTGALHDW 510 HSP 4 Score: 126.716 bits (317), Expect = 1.511e-28 Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 2
Query: 1400 VQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQKGIFSILIC--------YFLLGQHTS 1690
++T+LDIGCG+GSFGAHL ++ +CIA YE SGSQVQL LERGLPAMI +F SKQLPYP+LSFDM+HCA C I WD K +L YF+L TS
Sbjct: 201 IRTVLDIGCGFGSFGAHLVSLNVMPICIAEYETSGSQVQLALERGLPAMIGNFFSKQLPYPALSFDMVHCAQCGITWDIKDAMLLLEVDRVLKPGGYFVLTSPTS 305 HSP 5 Score: 63.1586 bits (152), Expect = 3.227e-20 Identity = 27/46 (58.70%), Postives = 39/46 (84.78%), Query Frame = 3
Query: 3975 CEAFPTYPRTYDLVHAAGLLSLETSQPRRCTMLDMFIEIDRVLRPE 4112
CE FPTYPRTYD++HA LL+ +S+ RC+++D+F+E+DR+LRPE
Sbjct: 511 CEPFPTYPRTYDMLHANELLTHLSSE--RCSLMDLFLEMDRILRPE 554 HSP 6 Score: 59.6918 bits (143), Expect = 3.227e-20 Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 4207 QGWVIIRDTIPLIESARALITQLKWEARVIEIESDNDHRLLISQKPFYKK 4356
+GWV++ D + +IE AR L +++WEARVI+I+ +D RLL+ QKP KK
Sbjct: 554 EGWVVLSDKLGVIEMARTLAARVRWEARVIDIQDGSDQRLLVCQKPLLKK 603 HSP 7 Score: 59.6918 bits (143), Expect = 1.585e-7 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 3
Query: 2400 DGILLIEADRLLKPGGYFVWTSPLIKSR-NKGDQKRWKF---VHDFTENLCWEMLSQQDATVVW 2579
D +LL+E DR+LKPGGYFV TSP K++ N D K+ V + ++ +CW + QQD T +W
Sbjct: 281 DAMLLLEVDRVLKPGGYFVLTSPTSKAQGNSPDTKKTSISTRVDELSKKICWSLSGQQDETFLW 344
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMTJ_ARATH (Probable methyltransferase PMT19 OS=Arabidopsis thaliana OX=3702 GN=At2g43200 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.330e-18 Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 2
Query: 1400 VQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDW 1630
++T+LDIGCG SFGA L + ++LTM IA + +QVQ LERGLPAM+ ++ +LPYPS SFDM+HC+ C ++W
Sbjct: 214 IRTVLDIGCGVASFGAFLLNYKILTMSIAPRDIHEAQVQFALERGLPAMLGVLSTYKLPYPSRSFDMVHCSRCLVNW 290 HSP 2 Score: 55.0694 bits (131), Expect = 1.274e-7 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 3
Query: 3975 CEAFPTYPRTYDLVHAAGLLSLETSQPRRCTMLDMFIEIDRVLRPE 4112
CEA TYPRTYDL+HA G+ SL +C ++D+ +E+ R+LRPE
Sbjct: 520 CEALSTYPRTYDLIHANGVFSLYLD---KCDIVDILLEMQRILRPE 562 HSP 3 Score: 25.0238 bits (53), Expect = 1.274e-7 Identity = 13/39 (33.33%), Postives = 21/39 (53.85%), Query Frame = 1
Query: 4207 QGWVIIRDTIPLIESARALITQLKWEARVI-EIESDNDH 4320
+G VIIRD ++ +A+ Q++W + E S DH
Sbjct: 562 EGAVIIRDRFDVLVKVKAITNQMRWNGTMYPEDNSVFDH 600
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMTC_ARATH (Probable methyltransferase PMT12 OS=Arabidopsis thaliana OX=3702 GN=At5g06050 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.054e-18 Identity = 39/76 (51.32%), Postives = 57/76 (75.00%), Query Frame = 2
Query: 1403 QTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDW 1630
+ +LDIGCG SFGA+L +LTM IA + +Q+Q LERG+PAM+A+FT+++L YPS +FD++HC+ C I+W
Sbjct: 276 RVVLDIGCGVASFGAYLMSRNVLTMSIAPKDVHENQIQFALERGVPAMVAAFTTRRLLYPSQAFDLVHCSRCRINW 351 HSP 2 Score: 81.2629 bits (199), Expect = 4.574e-14 Identity = 57/204 (27.94%), Postives = 93/204 (45.59%), Query Frame = 2
Query: 2759 VFTTRKSSSAPPLCGKGHDVETPYYRELQNCIGGMQSSRWIPIEKRGKWPSRANLNKNELAVYGICYALQHLIIERFMEVFYYILSY*TNMVVSICLYLNVSGLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
+ +R + +PPLC D + +Y +L+ CI ++ + + WP+R + L Q + I+ ++ + + F +S+ W+ + NY + L H K+ G RNVLDM A FGGF +AL + + WV+NV+P+SG N LP+I+DRG +GV+HDW
Sbjct: 422 CYLSRGAGVSPPLCNSEDDPDNVWYVDLKACITRIEENGYG--ANLAPWPARLLTPPDRL---------QTIQIDSYI-------------------------ARKELFVAESKYWKEIISNYVNAL-------HWKQIG----------LRNVLDMRAGFGGFAAALAELKVDCWVLNVIPVSGPNTLPVIYDRGLLGVMHDW 572 HSP 3 Score: 62.3882 bits (150), Expect = 1.419e-9 Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 3
Query: 3915 LLGPMHIIVFL*L*FLVASRCEAFPTYPRTYDLVHAAGLLSLETSQPRRCTMLDMFIEIDRVLRP 4109
LLG MH CE F TYPRTYDL+HAAGL S+E +RC M M +E+DR+LRP
Sbjct: 565 LLGVMH------------DWCEPFDTYPRTYDLLHAAGLFSIER---KRCNMTTMMLEMDRILRP 614 HSP 4 Score: 24.2534 bits (51), Expect = 1.419e-9 Identity = 13/48 (27.08%), Postives = 24/48 (50.00%), Query Frame = 1
Query: 4210 GWVIIRDTIPLIESARALITQLKWEARVIEIESD--NDHRLLISQKPF 4347
G V IRDTI + + + ++W + E + +R+L+ +K F
Sbjct: 616 GRVYIRDTINVTSELQEIGNAMRWHTSLRETAEGPHSSYRVLLCEKRF 663
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMT8_ARATH (Probable methyltransferase PMT8 OS=Arabidopsis thaliana OX=3702 GN=At1g04430 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.508e-17 Identity = 38/81 (46.91%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 1397 QVQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQK 1639
+++T+LD+GCG SFGA+L S ++TM +A + +Q+Q LERG+PA + +K+LPYPS SF+ HC+ C IDW Q+
Sbjct: 215 RLRTVLDVGCGVASFGAYLLASDIMTMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFEFAHCSRCRIDWLQR 295 HSP 2 Score: 77.7962 bits (190), Expect = 4.918e-13 Identity = 42/102 (41.18%), Postives = 55/102 (53.92%), Query Frame = 2
Query: 3065 GLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
G +D F +D+E W+ V +YW+L+S + S N RN++DM AH G F +AL K WVMNVV G N L LI+DRG IG H+W
Sbjct: 427 GYSTDMFEKDTELWKQQVDSYWNLMSSKVKS---------------NTVRNIMDMKAHMGSFAAALKD--KDVWVMNVVSPDGPNTLKLIYDRGLIGTNHNW 511 HSP 3 Score: 54.299 bits (129), Expect = 8.988e-8 Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 3
Query: 3975 CEAFPTYPRTYDLVHAAGLLSLETSQPRRCTMLDMFIEIDRVLRP 4109
CEAF TYPRTYDL+HA + S + + C+ D+ IE+DR+LRP
Sbjct: 512 CEAFSTYPRTYDLLHAWSIFS--DIKSKGCSAEDLLIEMDRILRP 554 HSP 4 Score: 26.5646 bits (57), Expect = 8.988e-8 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query: 4210 GWVIIRDTIPLIESARALITQLKWE 4284
G+VIIRD ++ES + + L WE
Sbjct: 556 GFVIIRDKQSVVESIKKYLQALHWE 580 HSP 5 Score: 57.7658 bits (138), Expect = 6.196e-7 Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 1
Query: 427 KELESCSEEHENFVPC----FNVSENLALGNSDGNEFDRQCGR-ELRQNCLVLPPVNYKIPLQWPTGRDVIWIANVKIT 648
K C + H +PC F L L S ++R C E R NCL+ PP YK+P++WP RD +W AN+ T
Sbjct: 82 KSFPVCDDRHSEIIPCLDRNFIYQMRLKLDLSLMEHYERHCPPPERRFNCLIPPPSGYKVPIKWPKSRDEVWKANIPHT 160
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMT1_ARATH (Probable methyltransferase PMT1 OS=Arabidopsis thaliana OX=3702 GN=At3g23300 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.036e-16 Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 1397 QVQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQK 1639
+++T LD+GCG SFG +L S+++TM +A + +Q+Q LERG+PA + +K+LPYPS SF++ HC+ C IDW Q+
Sbjct: 210 RLRTFLDVGCGVASFGGYLLASEIMTMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 290 HSP 2 Score: 86.6557 bits (213), Expect = 7.699e-16 Identity = 45/102 (44.12%), Postives = 56/102 (54.90%), Query Frame = 2
Query: 3065 GLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
G +D F +D+E+WR V YW LLSP I SD RN++DM A G F +AL + K WVMNVVP G N L LI+DRG +G +H W
Sbjct: 422 GYSTDIFEKDTETWRQRVDTYWDLLSPKIQSD---------------TVRNIMDMKASMGSFAAALKE--KDVWVMNVVPEDGPNTLKLIYDRGLMGAVHSW 506 HSP 3 Score: 60.4622 bits (145), Expect = 1.016e-7 Identity = 23/60 (38.33%), Postives = 42/60 (70.00%), Query Frame = 3
Query: 2400 DGILLIEADRLLKPGGYFVWTSPLIKSRNKGDQKRWKFVHDFTENLCWEMLSQQDATVVW 2579
DGILL+E DR+L+PGGYF ++SP ++++ D + W+ + +CW + ++++ TV+W
Sbjct: 291 DGILLLELDRVLRPGGYFAYSSPEAYAQDEEDLRIWREMSALVGRMCWTIAAKRNQTVIW 350
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMT3_ARATH (Probable methyltransferase PMT3 OS=Arabidopsis thaliana OX=3702 GN=At4g14360 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.819e-16 Identity = 37/81 (45.68%), Postives = 56/81 (69.14%), Query Frame = 2
Query: 1397 QVQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQK 1639
+++T+ D+GCG SFG +L S +LTM +A + +Q+Q LERG+PA + +K+LPYPS SF++ HC+ C IDW Q+
Sbjct: 207 RLRTVFDVGCGVASFGGYLLSSDILTMSLAPNDVHQNQIQFALERGIPASLGVLGTKRLPYPSRSFELSHCSRCRIDWLQR 287 HSP 2 Score: 80.4925 bits (197), Expect = 5.707e-14 Identity = 44/102 (43.14%), Postives = 54/102 (52.94%), Query Frame = 2
Query: 3065 GLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
G + F +D+E WR V YW LLSP I SD RN++DM A G F +AL + K WVMNVVP G N L LI+DRG +G +H W
Sbjct: 419 GYSTGMFEKDTELWRQRVDTYWDLLSPRIESD---------------TVRNIMDMKASMGSFAAALKE--KDVWVMNVVPEDGPNTLKLIYDRGLMGAVHSW 503 HSP 3 Score: 63.5438 bits (153), Expect = 1.213e-8 Identity = 24/60 (40.00%), Postives = 44/60 (73.33%), Query Frame = 3
Query: 2400 DGILLIEADRLLKPGGYFVWTSPLIKSRNKGDQKRWKFVHDFTENLCWEMLSQQDATVVW 2579
DGILL+E DR+L+PGGYF ++SP ++++ D + W+ + E +CW++ ++++ TV+W
Sbjct: 288 DGILLLELDRVLRPGGYFAYSSPEAYAQDEEDLRIWREMSALVERMCWKIAAKRNQTVIW 347
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMT7_ARATH (Probable methyltransferase PMT7 OS=Arabidopsis thaliana OX=3702 GN=At5g04060 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.826e-16 Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 2
Query: 1385 ILNLQVQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQK 1639
+L+ V+ +LD+GCG SF A+L + TM A + +Q+Q LERG+ AMI++ +KQ+PYP+ SFDM+HC+ C +DW +
Sbjct: 209 LLSAGVEQVLDVGCGVASFAAYLLPLGIKTMSFAPKDGHENQIQFALERGIRAMISAIATKQMPYPAASFDMVHCSRCRVDWHEN 293 HSP 2 Score: 62.7734 bits (151), Expect = 2.151e-8 Identity = 39/116 (33.62%), Postives = 51/116 (43.97%), Query Frame = 2
Query: 3023 TNMVVSICLYLNVSGLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
T+ + S L G+ DEF D+ WR V YW L++ RNV+D NA GGF +A+ WVMNVVP + + L I+ RG G HDW
Sbjct: 406 TDRLSSYPTSLREKGISEDEFTLDTNFWREQVNQYWELMN-----------------VNKTEVRNVMDTNAFIGGFAAAM--NSYPLWVMNVVPATMNDTLSGIYQRGLTGAYHDW 502
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Match: PMTB_ARATH (Probable methyltransferase PMT11 OS=Arabidopsis thaliana OX=3702 GN=At2g39750 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.139e-16 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 2
Query: 1397 QVQTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCAIDWDQ-KGIFSILICYFL 1672
++ +D+GCG SFGA+L ++TM +A + +Q+Q LERG+PAM A+F +++L YPS +FD++HC+ C I+W + GI + I L
Sbjct: 302 HIRVAMDVGCGVASFGAYLLSRDVMTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEINRML 394 HSP 2 Score: 76.6406 bits (187), Expect = 1.152e-12 Identity = 53/207 (25.60%), Postives = 87/207 (42.03%), Query Frame = 2
Query: 2759 VFTTRKSSSAPPLCGKGHDVETPYYRELQNCIGGMQSSRW---IPIEKRGKWPSRANLNKNELAVYGICYALQHLIIERFMEVFYYILSY*TNMVVSICLYLNVSGLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHXXXXXXXXXXXXYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDW 3370
+ +R++ + PPLC + D + +Y L+ CI + + +P+ WP+R + + L Q + + ++ + + F +S+ W + Y L RNVLDM A FGGF +AL + WV++VVP+SG N LP+I+DRG +GV+HDW
Sbjct: 450 CYLSREAGTKPPLCDESDDPDNVWYTNLKPCISRIPEKGYGGNVPL-----WPARLHTPPDRL---------QTIKFDSYI-------------------------ARKELFKAESKYWNEIIGGYVRALK-----------------WKKMKLRNVLDMRAGFGGFAAALNDHKLDCWVLSVVPVSGPNTLPVIYDRGLLGVMHDW 600 HSP 3 Score: 57.3806 bits (137), Expect = 9.000e-7 Identity = 30/65 (46.15%), Postives = 38/65 (58.46%), Query Frame = 3
Query: 3915 LLGPMHIIVFL*L*FLVASRCEAFPTYPRTYDLVHAAGLLSLETSQPRRCTMLDMFIEIDRVLRP 4109
LLG MH CE F TYPRTYD +HA+GL S+E +RC M + +E+DR+LRP
Sbjct: 593 LLGVMH------------DWCEPFDTYPRTYDFLHASGLFSIER---KRCEMSTILLEMDRILRP 642 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01634 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01634_La_Tanjil_v1.0 ID=rna-TanjilR_01634_La_Tanjil_v1.0; Name=rna-TanjilR_01634; organism=Lupinus angustifolius; type=mRNA; length=4368bpback to top protein sequence of rna-TanjilR_01634_La_Tanjil_v1.0 >rna-TanjilR_01634_La_Tanjil_v1.0 ID=rna-TanjilR_01634_La_Tanjil_v1.0; Name=rna-TanjilR_01634_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=683bpback to top mRNA from alignment at Chr_LG09-CM007369.1:18544771..18549138- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01634_La_Tanjil_v1.0 ID=rna-TanjilR_01634_La_Tanjil_v1.0; Name=rna-TanjilR_01634; organism=Lupinus angustifolius; type=mRNA; length=4368bp; location=Sequence derived from: Chr_LG09-CM007369.1:18544771..18549138- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:18544771..18549138- >rna-TanjilR_01634_La_Tanjil_v1.0 ID=rna-TanjilR_01634_La_Tanjil_v1.0; Name=rna-TanjilR_01634; organism=Lupinus angustifolius; type=CDS; length=2052bp; location=Sequence derived from: Chr_LG09-CM007369.1:18544771..18549138- (Lupinus angustifoliusback to top |