rna-TanjilR_00758
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana OX=3702 GN=PAO3 PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 2.440e-78 Identity = 121/156 (77.56%), Postives = 136/156 (87.18%), Query Frame = 2
Query: 4115 ALIIPYIFRVKKIVRRYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFWPNVEFLGVVAETSYGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVL 4582
L I R+ KI RRY+ VKVTTE G+TFVADAA++A+PLGVLK+ +I FEPKLP WK+ AI DLGVGIENKIIL+F+NVFWPNVEFLGVVAETSYGCSYFLNLHKA HPVLVYMPAGQLA+DIEK SDEAAANFAF+QL+KILPDASSP+ L
Sbjct: 238 GLDIRLSHRITKISRRYSGVKVTTEKGDTFVADAAVIALPLGVLKSGMITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFLNLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYL 393 HSP 2 Score: 61.2326 bits (147), Expect = 2.440e-78 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 1
Query: 3949 EVLLPGGHGLMVRGYLPVIHTLAKGIDIRLGHR 4047
E LLPGGHGLMVRGY PVI+TL+KG+DIRL HR
Sbjct: 214 EELLPGGHGLMVRGYRPVINTLSKGLDIRLSHR 246 HSP 3 Score: 152.525 bits (384), Expect = 1.658e-37 Identity = 74/101 (73.27%), Postives = 84/101 (83.17%), Query Frame = 2
Query: 4823 IQYLVSRWGTDINSLGSYSYDAVQKPHDLYERLRVPVDNLFFAGEATSMLYMGSVHGAFSTGMMAAEDCRMRVLERYGEIDLLQTALGEEASAVPLQISRL 5125
I YLVSRWG+DINSLGSYSYD V KPHDLYERLRVP+DNLFFAGEATS Y GSVHGA+STG++AAEDCRMRVLERYGE++ ++VPL ISR+
Sbjct: 390 INYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPLDNLFFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVLERYGELEHEMEEEA--PASVPLLISRM 488 HSP 4 Score: 97.4413 bits (241), Expect = 1.565e-32 Identity = 54/101 (53.47%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 2758 LHGVCKENPLAPLIGKLGLPLYRTSEDNSVLYDHDLER*VHHLLMFYDISXXXXXXXXNS*SFRLFGESCSYALFDMDGNQVPLELVTEVGKLFERVLEEV 3060
LHGVCKENPLA +IG+LGLPLYRTS DNSVLYDHDLE SYALFD GNQV ELVT+VG+ FE +LEE+
Sbjct: 84 LHGVCKENPLAAVIGRLGLPLYRTSGDNSVLYDHDLE---------------------------------SYALFDKAGNQVSQELVTKVGENFEHILEEI 151 HSP 5 Score: 67.0106 bits (162), Expect = 1.565e-32 Identity = 28/33 (84.85%), Postives = 32/33 (96.97%), Query Frame = 2
Query: 2558 SNQVVLLESRERLGGRIHTDYSFGFPVDLGASW 2656
S QVV+LESR+R+GGR+HTDYSFGFPVDLGASW
Sbjct: 51 SFQVVVLESRDRIGGRVHTDYSFGFPVDLGASW 83 HSP 6 Score: 73.559 bits (179), Expect = 8.694e-18 Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 1
Query: 3385 RLEGLAHKVLQWYLCRMEGWFAADSDTISLKNWDQ 3489
RLEGLAH VLQWYLCRMEGWFAAD++TIS K WDQ
Sbjct: 179 RLEGLAHNVLQWYLCRMEGWFAADAETISAKCWDQ 213 HSP 7 Score: 41.2022 bits (95), Expect = 8.694e-18 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 2
Query: 3209 KVRQEFSEDMSILRALSIVFERKPEFRL 3292
KVR E EDMSI +A SIVF+R PE RL
Sbjct: 153 KVRDEQDEDMSIAQAFSIVFKRNPELRL 180
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: PAO2_ARATH (Polyamine oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PAO2 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 1.533e-74 Identity = 129/162 (79.63%), Postives = 139/162 (85.80%), Query Frame = 2
Query: 4103 LNVLA--LIIPYIFRVKKIVRRYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFWPNVEFLGVVAETSYGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVL 4582
+N LA L I RV KIVRRYN VKVTTENG+TFVADAA++AVPLGVLK+ I+FEPKLP+WK+ AI DLGVGIENKIILHFE VFWP VEFLGVVAETSYGCSYFLNLHKA GHPVLVYMPAGQLAKDIEKMSDEAAANFA QL++ILPDA PV L
Sbjct: 231 INTLAKGLDIRVGHRVTKIVRRYNGVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNLHKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYL 392 HSP 2 Score: 174.096 bits (440), Expect = 7.558e-45 Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 2
Query: 4823 IQYLVSRWGTDINSLGSYSYDAVQKPHDLYERLRVPVDNLFFAGEATSMLYMGSVHGAFSTGMMAAEDCRMRVLERYGEIDLLQTALGEEASA-VPLQISRL 5125
+QYLVSRWG+D+NS+GSYSYD V KPHDLYERLRVPVDNLFFAGEATS + GSVHGA+STG+MAAEDCRMRVLERYGE+DL Q +GEE A VPL ISRL
Sbjct: 389 VQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNLFFAGEATSSSFPGSVHGAYSTGLMAAEDCRMRVLERYGELDLFQPVMGEEGPASVPLLISRL 490 HSP 3 Score: 110.153 bits (274), Expect = 6.185e-36 Identity = 58/101 (57.43%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 2758 LHGVCKENPLAPLIGKLGLPLYRTSEDNSVLYDHDLER*VHHLLMFYDISXXXXXXXXNS*SFRLFGESCSYALFDMDGNQVPLELVTEVGKLFERVLEEV 3060
LHGVCKENPLAP+IG+LGLPLYRTS DNSVLYDHDLE SYALFDMDGNQVP ELVT++G FER+LEE+
Sbjct: 83 LHGVCKENPLAPVIGRLGLPLYRTSGDNSVLYDHDLE---------------------------------SYALFDMDGNQVPQELVTQIGVTFERILEEI 150 HSP 4 Score: 65.855 bits (159), Expect = 6.185e-36 Identity = 27/33 (81.82%), Postives = 32/33 (96.97%), Query Frame = 2
Query: 2558 SNQVVLLESRERLGGRIHTDYSFGFPVDLGASW 2656
S QV++LESR+R+GGR+HTDYSFGFPVDLGASW
Sbjct: 50 SFQVMVLESRDRIGGRVHTDYSFGFPVDLGASW 82 HSP 5 Score: 72.0182 bits (175), Expect = 4.264e-17 Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 1
Query: 3385 RLEGLAHKVLQWYLCRMEGWFAADSDTISLKNWDQ 3489
RLEGLAH VLQWY+CRMEGWFAAD++TIS K WDQ
Sbjct: 178 RLEGLAHNVLQWYVCRMEGWFAADAETISAKCWDQ 212 HSP 6 Score: 40.4318 bits (93), Expect = 4.264e-17 Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 2
Query: 3200 QTNKVRQEFSEDMSILRALSIVFERKPEFRL 3292
+ NKVR E D+SI +A SIVF RKPE RL
Sbjct: 149 EINKVRDEQDADISISQAFSIVFSRKPELRL 179 HSP 7 Score: 62.3882 bits (150), Expect = 2.303e-8 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 1
Query: 3949 EVLLPGGHGLMVRGYLPVIHTLAKGIDIRLGHR 4047
E LLPGGHGLMVRGY PVI+TLAKG+DIR+GHR
Sbjct: 213 EELLPGGHGLMVRGYRPVINTLAKGLDIRVGHR 245
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: PAO3_ORYSJ (Polyamine oxidase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PAO3 PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 1.588e-66 Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 2
Query: 4103 LNVLA--LIIPYIFRVKKIVRRYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFWPNVEFLGVVAETSYGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVL 4582
+N LA L I RV +IVR N V+VT +G+TFVADAA++AVPLGVLKAN I+FEP+LP+WKE AI +L VG+ENKIILHF VFWPNVEFLGVV+ T+YGCSYFLNLHKA GHPVLVYMPAG+LA DIEK+SDEAAA FAF+QLKKILP+A+ P+ L
Sbjct: 221 INTLAKGLDIRLGHRVVEIVRHRNRVEVTVSSGKTFVADAAVIAVPLGVLKANTIKFEPRLPEWKEEAIRELSVGVENKIILHFSEVFWPNVEFLGVVSSTTYGCSYFLNLHKATGHPVLVYMPAGRLACDIEKLSDEAAAQFAFSQLKKILPNAAEPIHYL 382 HSP 2 Score: 152.14 bits (383), Expect = 1.847e-37 Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 2
Query: 4823 IQYLVSRWGTDINSLGSYSYDAVQKPHDLYERLRVPVDNLFFAGEATSMLYMGSVHGAFSTGMMAAEDCRMRVLERYGEIDLLQT---ALGEEAS--AVPLQISRL 5125
I YLVS WG+D N+LGSY++D V KP DLYE+LR+PVDNLFFAGEATS+ Y G+VHGAFSTG+MAAE+CRMRVLER+ E+D+L+ A+GE+ + +VPL ISRL
Sbjct: 379 IHYLVSHWGSDENTLGSYTFDGVGKPRDLYEKLRIPVDNLFFAGEATSVQYTGTVHGAFSTGLMAAEECRMRVLERFRELDMLEMCHPAMGEQTATVSVPLLISRL 484 HSP 3 Score: 93.9745 bits (232), Expect = 1.242e-31 Identity = 50/101 (49.50%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 2758 LHGVCKENPLAPLIGKLGLPLYRTSEDNSVLYDHDLER*VHHLLMFYDISXXXXXXXXNS*SFRLFGESCSYALFDMDGNQVPLELVTEVGKLFERVLEEV 3060
LHGVC+ENPLAP+IG+LGLPLYRTS D+SVL+DHDLE SYAL+D G+QVP ELV ++GK+FE +LEE
Sbjct: 73 LHGVCEENPLAPIIGRLGLPLYRTSGDDSVLFDHDLE---------------------------------SYALYDTKGHQVPQELVEKIGKVFETILEET 140 HSP 4 Score: 67.3958 bits (163), Expect = 1.242e-31 Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 2
Query: 2558 SNQVVLLESRERLGGRIHTDYSFGFPVDLGASW 2656
S +VVLLESR+R+GGRIHTDYSFGFPVDLGASW
Sbjct: 40 SFEVVLLESRDRIGGRIHTDYSFGFPVDLGASW 72 HSP 5 Score: 70.0922 bits (170), Expect = 1.891e-15 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 3385 RLEGLAHKVLQWYLCRMEGWFAADSDTISLKNWDQ 3489
R EG+AH VLQWYLCRMEGWFA D+D ISL+ WDQ
Sbjct: 168 RQEGIAHDVLQWYLCRMEGWFATDADAISLQGWDQ 202 HSP 6 Score: 36.965 bits (84), Expect = 1.891e-15 Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 2
Query: 3200 QTNKVRQEFSEDMSILRALSIVFERKPEFR 3289
+T K+R+E ED+SI +A++IV ER P R
Sbjct: 139 ETGKLREETKEDISIAKAIAIVMERNPHLR 168 HSP 7 Score: 65.855 bits (159), Expect = 2.143e-9 Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 1
Query: 3949 EVLLPGGHGLMVRGYLPVIHTLAKGIDIRLGHR 4047
EVLLPGGHGLMVRGY PVI+TLAKG+DIRLGHR
Sbjct: 203 EVLLPGGHGLMVRGYRPVINTLAKGLDIRLGHR 235
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana OX=3702 GN=PAO4 PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 2.620e-59 Identity = 98/149 (65.77%), Postives = 113/149 (75.84%), Query Frame = 2
Query: 4139 RVKKIVR-RYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFWPNVEFLGVVAETSYGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVL 4582
RV K+VR N+V V E G FVADA I+ VP+GVLKAN+I+FEP+LP WK +AI+ LGVG ENKI L F+ FWPNVEFLG+VA TSY C YFLNLHKA GHPVLVYM AG LA+D+EK+SDEA ANF QLKK+ PDA P L
Sbjct: 246 RVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYL 394 HSP 2 Score: 49.6766 bits (117), Expect = 2.620e-59 Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 1
Query: 3958 LPGGHGLMVRGYLPVIHTLAKGIDIRLGHR 4047
L GGHGLMV+GY PVI T+AK +DIRL HR
Sbjct: 217 LSGGHGLMVQGYEPVIRTIAKDLDIRLNHR 246 HSP 3 Score: 85.1149 bits (209), Expect = 5.798e-27 Identity = 47/101 (46.53%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 2758 LHGVCKENPLAPLIGKLGLPLYRTSEDNSVLYDHDLER*VHHLLMFYDISXXXXXXXXNS*SFRLFGESCSYALFDMDGNQVPLELVTEVGKLFERVLEEV 3060
LHGV ENPLAP+I +LGL LYRTS D+S+LYDHDLE SY LFDM GN++P +LVT+VG F+R+LEE
Sbjct: 84 LHGVSDENPLAPIIRRLGLTLYRTSGDDSILYDHDLE---------------------------------SYGLFDMHGNKIPPQLVTKVGDAFKRILEET 151 HSP 4 Score: 60.8474 bits (146), Expect = 5.798e-27 Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 2
Query: 2558 SNQVVLLESRERLGGRIHTDYSFGFPVDLGASW 2656
S +V +LESR+R+GGRIHTDYSFG PVD+GASW
Sbjct: 51 SFKVTVLESRDRIGGRIHTDYSFGCPVDMGASW 83 HSP 5 Score: 110.153 bits (274), Expect = 1.984e-23 Identity = 53/106 (50.00%), Postives = 72/106 (67.92%), Query Frame = 2
Query: 4826 QYLVSRWGTDINSLGSYSYDAVQKPHDLYERLRVPVDNLFFAGEATSMLYMGSVHGAFSTGMMAAEDCRMRVLERYGEIDLLQ--TALGE----EASAVPLQISRL 5125
QYLV+RWGTD N+LG Y+YD V P DLY RL PVDN+FF GEA ++ + GS HGAF G+ A+++C+ + ER G + L+ + +G E + VPLQISR+
Sbjct: 392 QYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFERLGAWEKLKLVSLMGNSDILETATVPLQISRM 497 HSP 6 Score: 63.929 bits (154), Expect = 2.329e-14 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 3385 RLEGLAHKVLQWYLCRMEGWFAADSDTISLKNWDQ 3489
R EG+A++VLQWYLCRME WFA D++ ISLK WDQ
Sbjct: 179 RQEGMAYEVLQWYLCRMEAWFAVDANLISLKCWDQ 213 HSP 7 Score: 39.2762 bits (90), Expect = 2.329e-14 Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 2
Query: 3200 QTNKVRQEFSEDMSILRALSIVFERKPEFR 3289
+T K+R E + DMS+L+ +SIV +R PE R
Sbjct: 150 ETEKIRDETANDMSVLQGISIVLDRNPELR 179
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: PAO4_ORYSJ (Polyamine oxidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=PAO4 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.398e-58 Identity = 92/148 (62.16%), Postives = 115/148 (77.70%), Query Frame = 2
Query: 4139 RVKKIVRRYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFWPNVEFLGVVAETSYGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVL 4582
RV KI R++N V VTTE+G ++ ADA I+ VPLGVLKANII+FEP+LP WK +AI DLGVGIENKI +HF+ VFWPNVE LG+V T C YFLNLHKA G+PVLVYM AG+ A+++EK+SD+ A + + LKK+LPDA+ P L
Sbjct: 241 RVTKIARQFNGVTVTTEDGTSYSADACIITVPLGVLKANIIKFEPELPSWKSSAIADLGVGIENKIAMHFDTVFWPNVEVLGMVGPTPKACGYFLNLHKATGNPVLVYMAAGRFAQEVEKLSDKEAVDLVMSHLKKMLPDATEPTKYL 388 HSP 2 Score: 48.521 bits (114), Expect = 1.398e-58 Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query: 3949 EVLLPGGHGLMVRGYLPVIHTLAKGIDIRLGHR 4047
E +L GGHGLMV GY P+I LA+G+DIRL R
Sbjct: 209 EHVLTGGHGLMVNGYYPIIQALAQGLDIRLNQR 241 HSP 3 Score: 82.4185 bits (202), Expect = 2.563e-25 Identity = 49/101 (48.51%), Postives = 54/101 (53.47%), Query Frame = 1
Query: 2758 LHGVCKENPLAPLIGKLGLPLYRTSEDNSVLYDHDLER*VHHLLMFYDISXXXXXXXXNS*SFRLFGESCSYALFDMDGNQVPLELVTEVGKLFERVLEEV 3060
LHGVC EN LAPLIG LGL LYRTS DNSVLYDHDLE SYALFD G+QV E V +V + FER+L+E
Sbjct: 79 LHGVCNENSLAPLIGYLGLKLYRTSGDNSVLYDHDLE---------------------------------SYALFDKAGHQVSKETVAKVEETFERILDET 146 HSP 4 Score: 57.7658 bits (138), Expect = 2.563e-25 Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 2
Query: 2558 SNQVVLLESRERLGGRIHTDYSFGFPVDLGASW 2656
S +V +LESR+R+GGR+HTDYSFG P+D+GASW
Sbjct: 46 SFEVTVLESRDRVGGRVHTDYSFGCPIDMGASW 78 HSP 5 Score: 114.39 bits (285), Expect = 6.755e-25 Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 2
Query: 4826 QYLVSRWGTDINSLGSYSYDAVQKPHDLYERLRVPVDNLFFAGEATSMLYMGSVHGAFSTGMMAAEDCRMRVLERYGEIDLLQTALGEEASAV--PLQISR 5122
+YLVSRWG+D NSLGSYS D V KP D+ R PV+NL+FAGEA S + GSVHGA+S+G+ AA++CR R+L + G DL+Q EE + V PLQI R
Sbjct: 386 KYLVSRWGSDPNSLGSYSCDLVGKPADVSARFAAPVENLYFAGEAASADHSGSVHGAYSSGIAAADECRKRILMQKGIPDLVQVKAYEEMAGVIAPLQICR 486 HSP 6 Score: 61.6178 bits (148), Expect = 4.724e-8 Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 3385 RLEGLAHKVLQWYLCRMEGWFAADSDTISLKNWDQ 3489
+L+G+ +VLQW +CR+E WFAAD+D ISLKNWDQ
Sbjct: 174 KLQGIDDQVLQWCVCRLEAWFAADADEISLKNWDQ 208
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: PAO5_ORYSJ (Polyamine oxidase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=PAO5 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 4.537e-58 Identity = 97/148 (65.54%), Postives = 117/148 (79.05%), Query Frame = 2
Query: 4139 RVKKIVRRYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFWPNVEFLGVVAETSYGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVL 4582
RV KI++RYN+ V E+G +FVADAAI+ VPLGVLKANII+FEP+LPDWK ++I+DLG+GIENKI L F +VFWPNVE LG VA TS C YFLNLHKA GHPVLV M AG+ A + EK+SDE + NF +QLKK+LP A+ PV L
Sbjct: 243 RVTKIIQRYNKTIVCVEDGTSFVADAAIITVPLGVLKANIIKFEPELPDWKLSSISDLGIGIENKIALRFNSVFWPNVEVLGRVAPTSNACGYFLNLHKATGHPVLVCMVAGRFAYEFEKLSDEESVNFVMSQLKKMLPGATEPVQYL 390 HSP 2 Score: 43.8986 bits (102), Expect = 4.537e-58 Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 1
Query: 3949 EVLLPGGHGLMVRGYLPVIHTLAKGIDIRLGHR 4047
E +L GGHGLMV GY PVI LA+ +DI L HR
Sbjct: 211 EHVLTGGHGLMVHGYDPVIKALAQDLDIHLNHR 243 HSP 3 Score: 88.1965 bits (217), Expect = 2.638e-28 Identity = 51/101 (50.50%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 2758 LHGVCKENPLAPLIGKLGLPLYRTSEDNSVLYDHDLER*VHHLLMFYDISXXXXXXXXNS*SFRLFGESCSYALFDMDGNQVPLELVTEVGKLFERVLEEV 3060
LHGVC EN LAPLI LGL LYRTS DNSVLYDHDLE SYALFD DG QVP E+VT+VG+ FE++L+E
Sbjct: 81 LHGVCNENSLAPLIRLLGLRLYRTSGDNSVLYDHDLE---------------------------------SYALFDKDGRQVPQEIVTKVGETFEKILKET 148 HSP 4 Score: 62.003 bits (149), Expect = 2.638e-28 Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 2
Query: 2558 SNQVVLLESRERLGGRIHTDYSFGFPVDLGASW 2656
S +V LLESR+RLGGR+HTDYSFG P+D+GASW
Sbjct: 48 SFKVTLLESRDRLGGRVHTDYSFGCPIDMGASW 80 HSP 5 Score: 122.094 bits (305), Expect = 1.911e-27 Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = 2
Query: 4823 IQYLVSRWGTDINSLGSYSYDAVQKPHDLYERLRVPVDNLFFAGEATSMLYMGSVHGAFSTGMMAAEDCRMRVLERYGEIDLLQTA---LGEEAS--AVPLQISRL 5125
+QYLVSRWGTD NSLGSYS D V KP DLYER PV NLFFAGEA + + GSVHGA+S+G++AAEDCR + + G DL Q + EE + VP QISRL
Sbjct: 387 VQYLVSRWGTDPNSLGSYSCDLVGKPADLYERFCAPVGNLFFAGEAACIDHSGSVHGAYSSGIVAAEDCRRHLSTQLGISDLFQVGKIIMREEMTEVMVPFQISRL 492 HSP 6 Score: 60.4622 bits (145), Expect = 5.361e-12 Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query: 3385 RLEGLAHKVLQWYLCRMEGWFAADSDTISLKNWDQ 3489
+L+GL ++VLQW +CR+E WFA D D ISLKNWDQ
Sbjct: 176 KLDGLQYEVLQWCICRLEAWFATDVDNISLKNWDQ 210 HSP 7 Score: 35.039 bits (79), Expect = 5.361e-12 Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 2
Query: 3200 QTNKVRQEFSEDMSILRALSIVFERKPEFRL 3292
+T KVR E +DM +++A+SIV +R P +L
Sbjct: 147 ETVKVRAEHEDDMPLIQAISIVLDRNPHLKL 177
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: LDL3_ARATH (Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=LDL3 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.897e-25 Identity = 62/168 (36.90%), Postives = 91/168 (54.17%), Query Frame = 2
Query: 4103 LNVLALIIPYIFRVKKIVRRYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFWPN-VEFLGVVAETS---YGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVLTLVT 4594
LN + + Y+ V + ++V+V+T NG ++ DA +V VPLG LKA I+F P LPDWK A+I LG G+ NK++L F VFW + V++ G AE + C F N+ K G PVL+ + G+ A + S N A L+K+ P V ++VT
Sbjct: 870 LNKIVSDVSYVSDVSAMDNSKHKVRVSTSNGCEYLGDAVLVTVPLGCLKAETIKFSPPLPDWKYASIKQLGFGVLNKVVLEFPTVFWDDSVDYFGATAEETDLRGECFMFWNVKKTVGAPVLIALVVGKAAFEYTNKSKSEHVNHAMMVLRKLFGGDLVPDPVASVVT 1037 HSP 2 Score: 27.335 bits (59), Expect = 4.897e-25 Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query: 3964 GGHGLMVRGYLPVIHTLAKGIDIRL 4038
G H ++ GY V+ +LA+G+DI L
Sbjct: 846 GPHAMIKGGYSRVVESLAEGLDIHL 870
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: LDL2_ORYSJ (Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0143400 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.965e-14 Identity = 54/148 (36.49%), Postives = 81/148 (54.73%), Query Frame = 2
Query: 4124 IPYIFR--VKKIVRRYNEVKVTTENGETFVADAAIVAVPLGVLKANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFW-PNVEFLGVV-AETSYGCSYFL--NLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKI 4549
+P ++ VK+I + V +T E G+ F AD A+ PLGVLK+ I FEP+LP+ K AI LG G+ NK+ + F +VFW ++ G + E S +FL + H +G VL+ + AG+ A + EK+ A + LK I
Sbjct: 367 VPVLYEKTVKRIEHGEDGVSITVEGGQVFKADMALCTAPLGVLKSRSIIFEPELPERKLEAIQRLGFGLLNKVAMVFPHVFWDEEIDTFGCLNKERSKRGEFFLFYSYHTVSGGAVLIALVAGEAALEFEKVDPAVALHRVLGILKGI 514
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)3-3 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.013e-14 Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 2
Query: 4181 TTENGETFVADAAIVAVPLGVLK----------ANIIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFW-PNVEFLGVVAETSYGCSYFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVLTLVTYF 4600
T+ + T+ AD + + LGVLK +N ++F+P LPDWK+ AI LG G NK++L F+ +FW PN G V T+ + PVL+ + AG A +E ++D+ + LK I + S P T+VT +
Sbjct: 602 TSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSISSSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRW 752
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Match: KDM1A_MOUSE (Lysine-specific histone demethylase 1A OS=Mus musculus OX=10090 GN=Kdm1a PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.490e-13 Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = 2
Query: 4181 TTENGETFV--ADAAIVAVPLGVLKAN--IIEFEPKLPDWKEAAITDLGVGIENKIILHFENVFW-PNVEFLGVVAETSYGCS---YFLNLHKAAGHPVLVYMPAGQLAKDIEKMSDEAAANFAFTQLKKILPDASSPVTVLTLVTYF 4600
T +TF+ DA + +PLGVLK ++F P LP+WK +A+ +G G NK++L F+ VFW P+V G V T+ F NL+KA P+L+ + AG+ A +E +SD+ LK I ++ P T+V+ +
Sbjct: 608 TRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKA---PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRW 752 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_00758 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_00758_La_Tanjil_v1.0 ID=rna-TanjilR_00758_La_Tanjil_v1.0; Name=rna-TanjilR_00758; organism=Lupinus angustifolius; type=mRNA; length=5128bpback to top protein sequence of rna-TanjilR_00758_La_Tanjil_v1.0 >rna-TanjilR_00758_La_Tanjil_v1.0 ID=rna-TanjilR_00758_La_Tanjil_v1.0; Name=rna-TanjilR_00758_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=489bpback to top mRNA from alignment at Chr_LG09-CM007369.1:21219145..21224272- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_00758_La_Tanjil_v1.0 ID=rna-TanjilR_00758_La_Tanjil_v1.0; Name=rna-TanjilR_00758; organism=Lupinus angustifolius; type=mRNA; length=5128bp; location=Sequence derived from: Chr_LG09-CM007369.1:21219145..21224272- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:21219145..21224272- >rna-TanjilR_00758_La_Tanjil_v1.0 ID=rna-TanjilR_00758_La_Tanjil_v1.0; Name=rna-TanjilR_00758; organism=Lupinus angustifolius; type=CDS; length=1470bp; location=Sequence derived from: Chr_LG09-CM007369.1:21219145..21224272- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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