rna-TanjilR_19344
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.964e-83 Identity = 72/168 (42.86%), Postives = 99/168 (58.93%), Query Frame = -1
Query: 2668 EFEMTDLGLMHYFLGIEVV*STNGYFISQKKYVQELFNKFQMQDCNPVSTPFEYGLKLNKDSEGKKVDNTLFKQIVGSLMYLTATRPDIMHFVSLISRYMESPTEMHILAAK*IFRYLQGTKQLGLFFKKGEKSELIGFTDSDFAGDQDDRRSTSGYVFMLDTGAVSW 3171
F + D +HYFLGIE G +SQ++Y+ +L + M PV+TP KL+ S K D T ++ IVGSL YL TRPDI + V+ +S++M PTE H+ A K I RYL GT G+F KKG L ++D+D+AGD+DD ST+GY+ L +SW
Sbjct: 1174 RFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISW 1341 HSP 2 Score: 83.5741 bits (205), Expect = 8.964e-83 Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = -3
Query: 2303 KQPIVTLSTIEAEFVAASTCACQAIWLRKILEELHFKHEEVTTIYCDNTSAIKLSINPVLHGRSKHIDVKYYFLRDLNNDGTIFLKYCRSEDQLVGIFTKPLKTPLFQNLRNLSGVCKL 2659
KQ V S+ EAE+ + + + + W+ +L EL + IYCDN A L NPV H R KHI + Y+F+R+ G + + + + DQL TKPL FQN + GV ++
Sbjct: 1345 KQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTRV 1463 HSP 3 Score: 78.5666 bits (192), Expect = 8.964e-83 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = -1
Query: 3322 KGYKQE*GVEYKEVYAPVVRHDTIRLVIVMAAQNSWPTYQMDVKSASHHRILDEQVFVD*PPGYIKVGNEHKVYRLKKTLYGLK*APR 3585
KGY Q G++Y E ++PV++ +IR+V+ +A SWP Q+DV +A L + V++ PPG+I + V +L+K LYGLK APR
Sbjct: 1024 KGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1111 HSP 4 Score: 65.4698 bits (158), Expect = 8.964e-83 Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = -3
Query: 3584 ALFSDCDPTTFENAAKEAKWQKAMDEEIRAIERNHTWELVDLPDEQKT-VGVKWLFKTKRKKNGEVDKYKERLVDK 3808
+L ++ +P T A K+ +W+ AM EI A NHTW+LV P T VG +W+F K +G +++YK RLV K
Sbjct: 949 SLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAK 1024 HSP 5 Score: 28.4906 bits (62), Expect = 8.964e-83 Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = -2
Query: 3210 TLFVKVRSEGKIFIVCLYVDDLIFTGND 3293
+LFV R + ++++ +YVDD++ TGND
Sbjct: 1134 SLFVLQRGKSIVYML-VYVDDILITGND 1160 HSP 6 Score: 78.1814 bits (191), Expect = 2.515e-20 Identity = 45/157 (28.66%), Postives = 80/157 (50.96%), Query Frame = -1
Query: 4357 CEECVVDKQPRSSFPQGKSWRAKQVLELIHSDI-CGPINPTSNGGKHYFITFIDDYSRKTWVYFLQEKSEVLFVFKHYKALVEKG-----------------------SEHAIKRQLTTAYTPQQNGIAERKNRTILNMVRTISKMSGVPRNFWPKA 4755
C +C+++K + F Q + + + LE I+SD+ PI S+ Y++ F+D ++R TW+Y L++KS+V F +K L+E S+H I + +TP+ NG++ERK+R I+ T+ + +P+ +WP A
Sbjct: 500 CSDCLINKSNKVPFSQS-TINSTRPLEYIYSDVWSSPI--LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYA 653 HSP 7 Score: 46.2098 bits (108), Expect = 2.515e-20 Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = -3
Query: 4079 HLLDRSPTFAVKNMTPAEAWNGHKPSVEHFRIFGCIAYAHVLXXXXXXXXXXXXKCIFLGVSETSKAYKLYNPLTKKIVTSRDVIFDE 4342
+L++R PT ++ +P + G P+ + R+FGC Y + + KLDDK +C+FLG S T AY + T ++ SR V FDE
Sbjct: 659 YLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDE 746
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.238e-80 Identity = 68/159 (42.77%), Postives = 92/159 (57.86%), Query Frame = -1
Query: 2668 MHYFLGIEVV*STNGYFISQKKYVQELFNKFQMQDCNPVSTPFEYGLKLNKDSEGKKVDNTLFKQIVGSLMYLTATRPDIMHFVSLISRYMESPTEMHILAAK*IFRYLQGTKQLGLFFKKGEKSELIGFTDSDFAGDQDDRRSTSGYVFMLDTGAVSW 3144
+HYFLGIE G +SQ++Y +L + M PV+TP KL S K D T ++ IVGSL YL TRPD+ + V+ +S+YM PT+ H A K + RYL GT G+F KKG L ++D+D+AGD DD ST+GY+ L +SW
Sbjct: 1166 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISW 1324 HSP 2 Score: 82.4185 bits (202), Expect = 1.238e-80 Identity = 43/119 (36.13%), Postives = 61/119 (51.26%), Query Frame = -3
Query: 2303 KQPIVTLSTIEAEFVAASTCACQAIWLRKILEELHFKHEEVTTIYCDNTSAIKLSINPVLHGRSKHIDVKYYFLRDLNNDGTIFLKYCRSEDQLVGIFTKPLKTPLFQNLRNLSGVCKL 2659
KQ V S+ EAE+ + + + + W+ +L EL + IYCDN A L NPV H R KHI + Y+F+R+ G + + + + DQL TKPL FQN GV K+
Sbjct: 1328 KQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKV 1446 HSP 3 Score: 78.9518 bits (193), Expect = 1.238e-80 Identity = 36/88 (40.91%), Postives = 56/88 (63.64%), Query Frame = -1
Query: 3322 KGYKQE*GVEYKEVYAPVVRHDTIRLVIVMAAQNSWPTYQMDVKSASHHRILDEQVFVD*PPGYIKVGNEHKVYRLKKTLYGLK*APR 3585
KGY Q G++Y E ++PV++ +IR+V+ +A SWP Q+DV +A L ++V++ PPG++ V RL+K +YGLK APR
Sbjct: 1007 KGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1094 HSP 4 Score: 65.4698 bits (158), Expect = 1.238e-80 Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = -3
Query: 3584 ALFSDCDPTTFENAAKEAKWQKAMDEEIRAIERNHTWELVDLPDEQKT-VGVKWLFKTKRKKNGEVDKYKERLVDK 3808
+L ++ +P T A K+ +W++AM EI A NHTW+LV P T VG +W+F K +G +++YK RLV K
Sbjct: 932 SLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAK 1007 HSP 5 Score: 28.8758 bits (63), Expect = 1.238e-80 Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = -2
Query: 3210 TLFVKVRSEGKIFIVCLYVDDLIFTGND 3293
+LFV R I+++ +YVDD++ TGND
Sbjct: 1117 SLFVLQRGRSIIYML-VYVDDILITGND 1143 HSP 6 Score: 77.7962 bits (190), Expect = 9.315e-21 Identity = 47/157 (29.94%), Postives = 79/157 (50.32%), Query Frame = -1
Query: 4357 CEECVVDKQPRSSFPQGKSWRAKQVLELIHSDI-CGPINPTSNGGKHYFITFIDDYSRKTWVYFLQEKSEVLFVFKHYKALVEKG-----------------------SEHAIKRQLTTAYTPQQNGIAERKNRTILNMVRTISKMSGVPRNFWPKA 4755
C +C ++K + F + + + LE I+SD+ PI S Y++ F+D ++R TW+Y L++KS+V F +K+LVE S+H I + +TP+ NG++ERK+R I+ M T+ + VP+ +WP A
Sbjct: 479 CSDCFINKSHKVPF-SNSTITSSKPLEYIYSDVWSSPI--LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYA 632 HSP 7 Score: 48.1358 bits (113), Expect = 9.315e-21 Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = -3
Query: 4076 KKFLAKSCKLEHHLLDRSPTFAVKNMTPAEAWNGHKPSVEHFRIFGCIAYAHVLXXXXXXXXXXXXKCIFLGVSETSKAYKLYNPLTKKIVTSRDVIFDEE 4378
K + + + +L++R PT ++ +P + G P+ E ++FGC Y + R KL+DK ++C F+G S T AY + T ++ TSR V FDE
Sbjct: 626 KTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDER 726
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-9 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.830e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 1.830e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 1.830e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.830e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 1.830e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 1.830e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.830e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 1.830e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 1.830e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.830e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 1.830e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 1.830e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF26_SCHPO (Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-6 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.037e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 2.037e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 2.037e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-5 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.037e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 2.037e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 2.037e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.037e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 2.037e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 2.037e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.037e-76 Identity = 133/460 (28.91%), Postives = 226/460 (49.13%), Query Frame = 3
Query: 7389 FFSKIDLRSGYHQIRLASDDTH----------YEFLVLPFGLTNGPSTFQAAMNDLLRPFLHKFFLVFFDDIMIFSKSLIDHSQHLQLILALLEQH*FYVKLSKCTFGVARVDYLGHTLSK*RVRPDPTKIQAIMDWPSPRSXXXXXXXXXXXXXYRRFIKHYATHAAPLTDLLKQG-KFLWSTEAQLAFTSMKQIMTTALVLTLPDFTKSFDVETDASAIAIGAVLSQAG-----HPIAHFGRKMSGRMQTASTYVREMYAITEAVKKWRQYLLG--HSFRIFTDQKSLKHFLXXXXXXXXXXXXXXK--LQGFKFEILYRPRTENRAADALSRCHTQDTNLLFSLSSPVP--------TLIRQLT---DFYST-----TEGKTLVDKLLTTNKH-QEIFNFANSLLYY-LDRLFVPEIPDLRSTLLAEFHLTPSVGHSRVKPTLVRVAASFYWSDMYK 8654
F+K+DL+S YH IR+ D H +E+LV+P+G++ P+ FQ +N +L + + DDI+I SKS +H +H++ +L L+ + +KC F ++V ++G+ +S+ P I ++ W P++ LR+FLG + R+FI + PL +LLK+ ++ W+ A ++KQ + + VL DF+K +ETDAS +A+GAVLSQ +P+ ++ KMS S +EM AI +++K WR YL F+I TD ++L +T + ++ + LQ F FEI YRP + N ADALSR + + P+P + Q++ DF + T L++ L +K +E + LL D++ +P L T++ ++H + H ++ + F W + K
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR--------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRK 948 HSP 2 Score: 109.768 bits (273), Expect = 2.037e-76 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 2
Query: 8663 KFIQHCLI*QQNKYLTIPKQGLLQPLTIPRQVWEDITMDFITHLPISCSHTIIWVVVDRLTKFAHFVGLSTHFIAA*LAGRFATDIYRLHGTPRSIVSDQDPLFLSKFWKEFFKLHSTRLCFSSAYHPEFDGRTE-----VVTLLGLI---QPTAKILH--LAEYWYNTNKHSATVMSPFLALYSRPPLTVRDYLPGRATAFSLDEFLRERKTILTTLKNNLFLSKQRMKSYIDSKRTD-RTFQEG 9367
+++Q+C Q NK G LQP+ + WE ++MDFIT LP S + ++VVVDR +K A V + A A F + G P+ I++D D +F S+ WK+F ++ + FS Y P+ DG+TE V LL + P + H L + YN HSAT M+PF ++ P LP + DE +E + T+K +L + +MK Y D K + FQ G
Sbjct: 952 EYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSD--KTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195 HSP 3 Score: 46.595 bits (109), Expect = 2.037e-76 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 7223 NAC*RHCHSPVLLVCKKDGTWRFCVDYRNLNALTVKNRFPIPTNDELLDELASAEIF 7393
NAC PV+ V KK+GT R VDY+ LN N +P+P ++LL ++ + IF
Sbjct: 448 NAC------PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_19344 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_19344_La_Tanjil_v1.0 ID=rna-TanjilR_19344_La_Tanjil_v1.0; Name=rna-TanjilR_19344; organism=Lupinus angustifolius; type=mRNA; length=11088bpback to top protein sequence of rna-TanjilR_19344_La_Tanjil_v1.0 >rna-TanjilR_19344_La_Tanjil_v1.0 ID=rna-TanjilR_19344_La_Tanjil_v1.0; Name=rna-TanjilR_19344_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=268bpback to top mRNA from alignment at Chr_LG10-CM007370.1:14884780..14895867- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_19344_La_Tanjil_v1.0 ID=rna-TanjilR_19344_La_Tanjil_v1.0; Name=rna-TanjilR_19344; organism=Lupinus angustifolius; type=mRNA; length=11088bp; location=Sequence derived from: Chr_LG10-CM007370.1:14884780..14895867- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG10-CM007370.1:14884780..14895867- >rna-TanjilR_19344_La_Tanjil_v1.0 ID=rna-TanjilR_19344_La_Tanjil_v1.0; Name=rna-TanjilR_19344; organism=Lupinus angustifolius; type=CDS; length=807bp; location=Sequence derived from: Chr_LG10-CM007370.1:14884780..14895867- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|