rna-TanjilR_06549
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: Y1461_ARATH (Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana OX=3702 GN=At1g54610 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 6.754e-48 Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 2
Query: 1433 KLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEV*HL 1780
K S ++KC M QL+SGL+HCHS GVLHRDIKGSNLLID+ GVLKIADFGLA+ FDP+H P+TSRVVTLWYR PELLLGA YGV +DLWS GCIL EL GRPI+PG+TEV L
Sbjct: 213 KFSESEVKCLMRQLISGLEHCHSRGVLHRDIKGSNLLIDDGGVLKIADFGLATIFDPNHKRPMTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCILAELLAGRPIMPGRTEVEQL 328 HSP 2 Score: 157.918 bits (398), Expect = 1.014e-38 Identity = 78/131 (59.54%), Postives = 97/131 (74.05%), Query Frame = 3
Query: 1017 WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMAREIHVLRRLDHPNVIKLEGLITSSMSHSLYLVFEYMEHDLTGLASNPAIKFSEPQVLMIFVFILSVF--CYTWSIVFIQTSISNF 1403
+ I +IGQGTYS VYKA D+ KIVALK+VRF N +PESVKFMAREI VLRRLDHPNV+KLEGL+TS MS SLYLVF+YM+HDL GLAS+P +KFSE +V + ++S C++ ++ SN
Sbjct: 118 FEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFQYMDHDLAGLASSPVVKFSESEVKCLMRQLISGLEHCHSRGVLHRDIKGSNL 248 HSP 3 Score: 98.2117 bits (243), Expect = 2.821e-19 Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 2
Query: 2186 VEQLHRIFKLCGSPSEDYWLKLRLPHLTIFKPANNYRRCVAEAFKEYPSPAVRLIATLLSVDPEHRGTAAAALKSE 2413
VEQLH+I+KLCGSPSEDYW K + H I+KP Y+R + E FK++P ++ LI LLS++PE R TA+AALKSE
Sbjct: 325 VEQLHKIYKLCGSPSEDYWKKGKFTHGAIYKPREPYKRSIRETFKDFPPSSLPLIDALLSIEPEDRQTASAALKSE 400 HSP 4 Score: 63.5438 bits (153), Expect = 1.450e-8 Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 319 GEQVAAGWPYWLSSVASEAINGWVPRSANTFERLHKVCTSLSALCFINKSTVT 477
GEQVAAGWP WLS EA+NGWVPR A+TFE++ K+ + + K +T
Sbjct: 88 GEQVAAGWPSWLSDACGEALNGWVPRKADTFEKIDKIGQGTYSNVYKAKDMLT 140
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: CDK9_SCHPO (Probable cyclin-dependent kinase 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdk9 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.508e-46 Identity = 63/128 (49.22%), Postives = 84/128 (65.62%), Query Frame = 2
Query: 1433 KLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLA------SHFDPDHNVPLTSR------VVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEV*HL 1780
K + Q+KCYM QL +G + H +LHRD+K +NLLIDN+G+LKIADFGLA S+ + + +P +R VVT WYR PELLLG Y A+D+WS GCI+ E+Y GRPIL G +++ L
Sbjct: 137 KFTEPQIKCYMKQLFAGTKYLHDQLILHRDLKAANLLIDNHGILKIADFGLARVITEESYANKNPGLPPPNRREYTGCVVTRWYRSPELLLGERRYTTAIDMWSVGCIMAEMYKGRPILQGSSDLDQL 264 HSP 2 Score: 78.5666 bits (192), Expect = 9.508e-46 Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 3
Query: 1017 WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMA-REIHVLRRLDHPNVIKLEGL--ITSSMSH----SLYLVFEYMEHDLTGLASNPAIKFSEPQV 1322
+H + ++G+GT+ VYK+ + K+ ALKR+ H + E A REI +L+ + H N+I L + + + H S+Y+V YM+HDL+GL NP++KF+EPQ+
Sbjct: 36 YHLMEKLGEGTFGEVYKSQRRKDGKVYALKRILMHT-EKEGFPITAIREIKILKSIKHENIIPLSDMTVVRADKKHRRRGSIYMVTPYMDHDLSGLLENPSVKFTEPQI 143
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKC-1 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.091e-41 Identity = 77/112 (68.75%), Postives = 89/112 (79.46%), Query Frame = 2
Query: 1433 KLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTE 1768
+ +V Q+KCYM QLL+GL +CH + VLHRDIKGSNLLIDN G LK+ADFGLA F DHN LT+RV+TLWYRPPELLLG+ YG AVD+WS GCI EL G+PILPGK E
Sbjct: 135 RFTVPQIKCYMKQLLTGLHYCHINQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLNGKPILPGKNE 246 HSP 2 Score: 91.6633 bits (226), Expect = 2.452e-17 Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 3
Query: 1017 WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMA-REIHVLRRLDHPNVIKLEGLITSSMSH---------------SLYLVFEYMEHDLTGLASNPAIKFSEPQVLMIFVFILSV--FCYTWSIVFIQTSISNF 1403
+ + QIG+GTY VY A + Q+IVALK++R N E A REI +L++L H NVI+L+ ++TS S+Y+VFEYM+HDLTGLA P ++F+ PQ+ +L+ +C+ ++ SN
Sbjct: 25 FEKLEQIGEGTYGQVYMARETETQEIVALKKIRMDNER-EGFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIHGNKYKGSIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMKQLLTGLHYCHINQVLHRDIKGSNL 170
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: IBS1_ARATH (Protein IMPAIRED IN BABA-INDUCED STERILITY 1 OS=Arabidopsis thaliana OX=3702 GN=IBS1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.948e-41 Identity = 77/116 (66.38%), Postives = 92/116 (79.31%), Query Frame = 2
Query: 1436 LSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNV-PLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEV*HL 1780
+ Q+KCYM QLLSGLDHCH+ GV+HRDIKGSNLL++N G+LK+ADFGLA+ + N PLTSRVVTLWYRPPELLLGA YG +VDLWS GC+ EL G+P+L G+TEV L
Sbjct: 227 FTTPQIKCYMKQLLSGLDHCHARGVMHRDIKGSNLLVNNEGILKVADFGLANFCNASGNKQPLTSRVVTLWYRPPELLLGATEYGASVDLWSVGCVFAELLIGKPVLQGRTEVEQL 342 HSP 2 Score: 140.969 bits (354), Expect = 1.510e-32 Identity = 67/131 (51.15%), Postives = 94/131 (71.76%), Query Frame = 3
Query: 1017 WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMAREIHVLRRLDHPNVIKLEGLITSSMSHSLYLVFEYMEHDLTGLASNPAIKFSEPQVLMIFVFILSVF--CYTWSIVFIQTSISNF 1403
+ + +IGQGTYS+V++A + +IVALK+VRF N +PESV+FMAREI +LR+L+HPN+IKLEG++TS +S S++LVFEYMEHDLTGL S+P I F+ PQ+ +LS C+ ++ SN
Sbjct: 131 FEKLEKIGQGTYSSVFRARETETGRIVALKKVRFDNFEPESVRFMAREILILRKLNHPNIIKLEGIVTSKLSCSIHLVFEYMEHDLTGLLSSPDIDFTTPQIKCYMKQLLSGLDHCHARGVMHRDIKGSNL 261 HSP 3 Score: 84.3445 bits (207), Expect = 6.678e-15 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 2
Query: 2186 VEQLHRIFKLCGSPSEDYWLKLRLPHLTIFKPANNYRRCVAEA--FKEYPSPAVRLIATLLSVDPEHRGTAAAALKSE 2413
VEQLH+IFKLCGSP EDYW K +LPH +FKP +Y C+ E K + LI TLLS+ P RGTA+ AL S+
Sbjct: 339 VEQLHKIFKLCGSPPEDYWKKSKLPHAMLFKPQQHYDGCLRETLKLKGLSDADINLIETLLSIQPHKRGTASTALVSQ 416 HSP 4 Score: 66.6254 bits (161), Expect = 2.302e-9 Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 292 FGRVPKAVEGEQVAAGWPYWLSSVASEAINGWVPRSANTFERLHKVCTSLSALCFINKSTVT 477
G + K +E EQVAAGWP WLS+VA EAI+GWVP ++ FE+L K+ + F + T T
Sbjct: 92 LGNLSKYLEAEQVAAGWPAWLSNVAGEAIHGWVPFRSDAFEKLEKIGQGTYSSVFRARETET 153
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: Y1960_ARATH (Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=3702 GN=At1g09600 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 5.271e-41 Identity = 99/179 (55.31%), Postives = 116/179 (64.80%), Query Frame = 2
Query: 1352 LLLYMEHCLYSNFN**L*LLATLFKIKKLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEV*HL*I*F-----PSFYHHNLYILRDAL*F**PQVYRNCL 1873
+ YMEH L LA+ I S Q+KCYM QLL GL+HCHS GVLHRDIKGSNLL+D+N LKI DFGLA+ + PLTSRVVTLWYRPPELLLG+ YGV VDLWSTGCIL EL+TG+PI+PG+TEV L F PS + + L A F Q Y+ C+
Sbjct: 240 IFEYMEHDLAG--------LASTPGIN-FSEAQIKCYMKQLLHGLEHCHSRGVLHRDIKGSNLLLDHNNNLKIGDFGLANFYQGHQKQPLTSRVVTLWYRPPELLLGSTDYGVTVDLWSTGCILAELFTGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKISKLPHATIFKPQQPYKRCV 409 HSP 2 Score: 153.68 bits (387), Expect = 1.192e-36 Identity = 70/102 (68.63%), Postives = 85/102 (83.33%), Query Frame = 3
Query: 1017 WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMAREIHVLRRLDHPNVIKLEGLITSSMSHSLYLVFEYMEHDLTGLASNPAIKFSEPQV 1322
+ + +IGQGTYS+VYKA DL ++VALK+VRF N DP+SV+FMAREI +LRRLDHPNV+KLEGLITS +S S+YL+FEYMEHDL GLAS P I FSE Q+
Sbjct: 163 FEKLEKIGQGTYSSVYKARDLETNQLVALKKVRFANMDPDSVRFMAREIIILRRLDHPNVMKLEGLITSRVSGSMYLIFEYMEHDLAGLASTPGINFSEAQI 264 HSP 3 Score: 109.768 bits (273), Expect = 1.157e-22 Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = 2
Query: 2186 VEQLHRIFKLCGSPSEDYWLKLRLPHLTIFKPANNYRRCVAEAFKEYPSPAVRLIATLLSVDPEHRGTAAAALKSE 2413
VEQLH+IFKLCGSPSE+YW +LPH TIFKP Y+RCVAE FK PS A+ L+ LL+V+P+ RGT A+AL+SE
Sbjct: 370 VEQLHKIFKLCGSPSEEYWKISKLPHATIFKPQQPYKRCVAETFKSLPSSALALVEVLLAVEPDARGTTASALESE 445 HSP 4 Score: 65.4698 bits (158), Expect = 4.848e-9 Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 268 LAVFDHPSFGRVPKAVEGE---QVAAGWPYWLSSVASEAINGWVPRSANTFERLHKV 429
+ P R+ GE QV AGWP WL+SVA EAINGW+PR A++FE+L K+
Sbjct: 113 IGTLQQPKMTRICSVSNGERGAQVMAGWPSWLASVAGEAINGWIPRKADSFEKLEKI 169
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: CDKC2_ORYSJ (Cyclin-dependent kinase C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKC-2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.803e-41 Identity = 76/112 (67.86%), Postives = 88/112 (78.57%), Query Frame = 2
Query: 1433 KLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTE 1768
+ +V Q+KCYM QLL+GL +CH + VLHRDIKGSNLLIDN G LK+ADFGLA F DHN LT+RV+TLWYRPPELLLG+ YG AVD+WS GCI EL G+PIL GK E
Sbjct: 135 RFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGSTRYGPAVDMWSVGCIFAELLNGKPILTGKNE 246 HSP 2 Score: 89.3521 bits (220), Expect = 1.068e-16 Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 3
Query: 1017 WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMA-REIHVLRRLDHPNVIKLEGLITSSMSH---------------SLYLVFEYMEHDLTGLASNPAIKFSEPQVLMIFVFILSV--FCYTWSIVFIQTSISNF 1403
+ + QIG+GTY VY A + +IVALK++R N E A REI +L++L H NVI+L+ ++TS S+Y+VFEYM+HDLTGLA P ++F+ PQ+ +L+ +C+ ++ SN
Sbjct: 25 FEKLEQIGEGTYGQVYMAKETETNEIVALKKIRMDNER-EGFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIEGNKYKGSIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNL 170 HSP 3 Score: 58.9214 bits (141), Expect = 3.620e-7 Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 2
Query: 2189 EQLHRIFKLCGSPSEDYWLKL-RLPHLTIFKPANNYRRCVAEAFKEYPSPAVRLIATLLSVDPEHRGTAAAALKSE 2413
EQL +IF+LCG+P E W + ++P FKP +R V E+FK + A+ L+ +L++DP R +A AL +E
Sbjct: 248 EQLSKIFELCGTPDELIWPGVTKMPWYNNFKPQRPMKRRVKESFKHFDQHALDLLEKMLTLDPSQRISAKDALDAE 323
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana OX=3702 GN=CDKC-2 PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 6.989e-41 Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 2
Query: 1433 KLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTE 1768
+ +V Q+KCYM QLL+GL +CH + VLHRDIKGSNLLIDN G LK+ADFGLA + DH LT+RV+TLWYRPPELLLGA YG A+D+WS GCI EL G+PILPGKTE
Sbjct: 135 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLNGKPILPGKTE 246 HSP 2 Score: 87.8113 bits (216), Expect = 3.616e-16 Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = 3
Query: 990 VYRSK*II*WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMA-REIHVLRRLDHPNVIKLEGLITSSM--------------SHSLYLVFEYMEHDLTGLASNPAIKFSEPQVLMIFVFILSV--FCYTWSIVFIQTSISNF 1403
++ S+ + + + QIG+GTY VY A ++ +IVALK++R N E A REI +L++L H NVI L+ ++TS +Y+VFEYM+HDLTGLA P ++F+ PQ+ +L+ +C+ ++ SN
Sbjct: 17 IWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNER-EGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 170
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana OX=3702 GN=CDKC-1 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.793e-39 Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = 2
Query: 1433 KLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTE 1768
+ +V Q+KCYM QLL+GL +CH + VLHRDIKGSNLLIDN G LK+ADFGLA + DH LT+RV+TLWYRPPELLLGA YG A+D+WS GCI EL +PILPGK E
Sbjct: 135 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLHAKPILPGKNE 246 HSP 2 Score: 88.9669 bits (219), Expect = 1.720e-16 Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 3
Query: 990 VYRSK*II*WHSIMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMA-REIHVLRRLDHPNVIKLEGLITSSM--------------SHSLYLVFEYMEHDLTGLASNPAIKFSEPQVLMIFVFILSV--FCYTWSIVFIQTSISNF 1403
++ S+ + + + QIG+GTY VY A ++ +IVALK++R N E A REI +L++L H NVI+L+ ++TS +Y+VFEYM+HDLTGLA P ++F+ PQ+ +L+ +C+ ++ SN
Sbjct: 17 IWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNER-EGFPITAIREIKILKKLHHENVIQLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 170 HSP 3 Score: 60.8474 bits (146), Expect = 9.414e-8 Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 2
Query: 2189 EQLHRIFKLCGSPSEDYWLKL-RLPHLTIFKPANNYRRCVAEAFKEYPSPAVRLIATLLSVDPEHRGTAAAALKSE 2413
EQL++IF+LCGSP E W + ++P FKPA +R V E F+ + A+ L+ +L +DP R +A AL +E
Sbjct: 248 EQLNKIFELCGSPDEKLWPGVSKMPWFNNFKPARPLKRRVREFFRHFDRHALELLEKMLVLDPAQRISAKDALDAE 323
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: CDK1_CAEEL (Cyclin-dependent kinase 1 OS=Caenorhabditis elegans OX=6239 GN=cdk-1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.053e-38 Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 2
Query: 1331 FCFHSLGLLLYMEHCLYSNFN**L*LLATLFKIKKLSVCQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPL---TSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEV*HL 1780
F F S L YM+ L K + L + LK Y Q+L + CH V+HRD+K NLL+DNNG +K+ADFGLA +P+ T VVTLWYR PE+L+GA Y + VD+WS GCI E+ T +P+ G +E+ L
Sbjct: 98 FEFLSFDLKRYMDQ---------------LGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDNNGAIKLADFGLARAI----GIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDEL 231 HSP 2 Score: 66.2402 bits (160), Expect = 2.053e-38 Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 3
Query: 1032 QIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMAREIHVLRRLDHPNVIKLEGLITSSMSHSLYLVFEYMEHDL 1274
+IG+GTY VYK + +VA+K++R + D REI +L+ L HPNV+ LE +I + L+L+FE++ DL
Sbjct: 27 KIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQ--ENRLFLIFEFLSFDL 105
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Match: CDK1_ORYLA (Cyclin-dependent kinase 1 OS=Oryzias latipes OX=8090 GN=cdk1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.234e-38 Identity = 59/113 (52.21%), Postives = 75/113 (66.37%), Query Frame = 2
Query: 1451 LKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASHFDPDHNVPL---TSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEV*HL 1780
+K Y++Q+L G+ CH VLHRD+K NLLIDN GV+K+ADFGLA F VP+ T VVTLWYR PE+LLG+ Y VD+WSTG I EL T +P+ G +E+ L
Sbjct: 105 VKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLARAF----GVPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQL 213 HSP 2 Score: 65.4698 bits (158), Expect = 2.234e-38 Identity = 33/106 (31.13%), Postives = 62/106 (58.49%), Query Frame = 3
Query: 1026 IMQIGQGTYSTVYKAHDLTNQKIVALKRVRFHNHDPESVKFMAREIHVLRRLDHPNVIKLEGLITSSMSHSLYLVFEYMEHDLTG-LASNPAIKFSEPQVLMIFVF 1340
I +IG+GTY VYK + ++VA+K++R + + RE+ +L+ L HPNV++L ++ LYL+FE++ DL L S P+ ++ +P ++ +++
Sbjct: 7 IEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQ--ESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLY 110 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06549 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_06549_La_Tanjil_v1.0 ID=rna-TanjilR_06549_La_Tanjil_v1.0; Name=rna-TanjilR_06549; organism=Lupinus angustifolius; type=mRNA; length=6137bpback to top protein sequence of rna-TanjilR_06549_La_Tanjil_v1.0 >rna-TanjilR_06549_La_Tanjil_v1.0 ID=rna-TanjilR_06549_La_Tanjil_v1.0; Name=rna-TanjilR_06549_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=699bpback to top mRNA from alignment at Chr_LG13-CM007373.1:3458373..3464509- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_06549_La_Tanjil_v1.0 ID=rna-TanjilR_06549_La_Tanjil_v1.0; Name=rna-TanjilR_06549; organism=Lupinus angustifolius; type=mRNA; length=6137bp; location=Sequence derived from: Chr_LG13-CM007373.1:3458373..3464509- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3458373..3464509- >rna-TanjilR_06549_La_Tanjil_v1.0 ID=rna-TanjilR_06549_La_Tanjil_v1.0; Name=rna-TanjilR_06549; organism=Lupinus angustifolius; type=CDS; length=2100bp; location=Sequence derived from: Chr_LG13-CM007373.1:3458373..3464509- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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