rna-TanjilR_06545

Transcript Overview
Namerna-TanjilR_06545
Unique Namerna-TanjilR_06545_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length673
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG13-CM007373.1supercontigChr_LG13-CM007373.1:3507932..3508604 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananR246Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR250Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0307Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0316Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0337Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0263Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0268Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0339Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0340Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0309Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0333Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0255Pisum sativum Cameor genome v1aPisum sativum
anpvR0320Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0322Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0331Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0258Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0274Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0290Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0290Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0298Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0305Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0343Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0350Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0281Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0298Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0261Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0262Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0301Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0277Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0242Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0289Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0304Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0319Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0321Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0237Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0283Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0294Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0324Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0264Cicer arietinum
ancarR0295Cicer arietinum
anccaR0238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0256Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0284Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0322Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0324Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0340Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0284Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0301Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0311Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0292Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0289Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0317Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0319Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0316Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0318Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0335Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0334Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR0243Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0326Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0331Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0262Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0339Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_09757.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014638921.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun11g104300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr02.1001336Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va05G043780.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg38257.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan05g149300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.01G097300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_07G00784.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_01G01053.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004487229.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg5703.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigan.07G097100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.05G032900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_00610.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Tiffany.R1.6g004520.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_00632.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vum_06G00878.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cr_11533.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun11g104300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058873550.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_02702.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_00303Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Tiffany.R1.1g033120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cc_v2.0_23990.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.07G073300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.06G130900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va09G060520.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.011G114400.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr05.2070Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.6g006240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Hedin2.R1.1g048720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat05G0751200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_14082Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058917908.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan09g244300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.01G125900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g215700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun05g215700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_05G00333.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat5g271400.2Pisum sativum Cameor genome v1aPisum sativum
Vigan.05G041700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Phvul.005G104200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_024779Cajanus cajan Asha genome v1.0Cajanus cajan
PvulFLAVERTChr05.703Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va01G018710.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun06g201900.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg43852.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
PvulFLAVERTChr06.2071Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr11.1019Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_03048Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_06545gene-TanjilG_06545_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06545rna-TanjilR_06545_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_06545_La_Tanjil_v1.0rna-TanjilR_06545_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06545_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3507932..3508496rna-TanjilR_06545_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3507932..3508496Lupinus angustifoliusexon
rna-TanjilR_06545_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3508579..3508604rna-TanjilR_06545_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3508579..3508604Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06545_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3507932..3508496rna-TanjilR_06545_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3507932..3508496Lupinus angustifoliusCDS
rna-TanjilR_06545_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3508579..3508604rna-TanjilR_06545_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3508579..3508604Lupinus angustifoliusCDS


Homology
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RMA1_CAPAN (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.173e-49
Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 1
Query:   70 GKWKSSSDVIADSDTNASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKWL-----SSETEEQQKSQCPVCKSEVSRSSLVPLYCH-GQTRRASEGKGHQVGTVIPPRPPAPTSYNT----TSASHPTSQSXXXXXXXXXXXXXXXQQLNSIPTSYTSPMLSTSSLQDMPFGLFGGMIYSRVFSNQVTDIFTNPNSYDNSWNSNPRFRSHL 672
            GKWKS +D + +   N SGGFDCNICL+ V +PV+TLCGHLYCWPCIYKW+     SSE  +QQ+ QCPVCK+EVS  +L+PLY   GQ+ + SEGK   +G VIP RPP+P         T+ S+P+     R +           Q + + +   SP  +T+++  +   + G + Y+R+F N  T ++T PNSY+ + +S+PR R  L
Sbjct:   22 GKWKSMNDEVEE---NISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQPAYQGSYMSSPMLSPGGATANM--LQHSMIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQL 227          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RMA1_ARATH (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.109e-38
Identity = 85/233 (36.48%), Postives = 115/233 (49.36%), Query Frame = 1
Query:    1 MAMDQYFEEAVPEIGSFEDKPYSGKWKSSSDVIAD--SDTNASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKWL-----SSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQTRRASEGKGHQVGTVIPPRPPAPTSYNTTSASHPTSQSXXXXXXXXXXXXXXXQQLNSIPTS--YTSPMLSTSSLQDMPFGLFGGMIYSRVFSNQVTDIFTNPNSYDNSWNSNPRFRSHL 672
            MA+DQ FE+A      + +  +  K K    +     SD      FDCNICL+ V++PVVTLCGHL+CWPCI+KWL     S+  E Q+  QCPVCKS+VS S+LVPLY  G+     EGK       +P RP  P          P S                  Q    P S   +S  LS S++ D    + G M+ +R+F  +V D F  P++Y+ +  S PR R  +
Sbjct:    1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGP----VYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRI 224          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RMA3_ARATH (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.806e-29
Identity = 68/176 (38.64%), Postives = 94/176 (53.41%), Query Frame = 1
Query:  115 NASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKW----LSSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQTRRASE--GKGHQVGTVIPPRPPAPTSYN--TTSAS--HPTSQSXXXXXXXXX--------XXXXXXQQLNSIPTSYTSPMLSTSSLQDMPFGLFGGMIYSRVF 588
            N SG FDCNICL+   DPVVTLCGHL+CWPCIYKW    LSS + +Q ++ CPVCKS ++ +SLVPLY  G +  +S    K     +   PR PAP++     TSAS  +P+ Q        H                  N++  S+  P++          G+FG ++Y+R+F
Sbjct:   37 NESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVI----------GMFGDLVYTRIF 202          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RMA2_ARATH (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.268e-26
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  112 TNASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKS----------QCPVCKSEVSRSSLVPLYCHGQTRRASEGKGHQVGTVIPPRPPAPT 390
             ++ G FDCNICL++V DPVVTLCGHL+CWPCI+KW  +    +Q+           +CPVCKS+VS ++LVP+Y  GQ       K  Q G+ +P RP  P 
Sbjct:   13 VDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRPTGPV 108          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.949e-20
Identity = 44/97 (45.36%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  115 NASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQTRRASEGKGHQVGTVIPPRP----PAPTS 393
             A   F+CNICLE   + VV++CGHLYCWPC+++WL +  E Q   +CPVCK+ +SR  +VPLY  G        K        PPRP    PAP S
Sbjct:   20 GAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQ---ECPVCKAGISREKVVPLYGRGSQ------KPQDPRLKTPPRPQGQRPAPES 107          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus OX=10116 GN=Rnf5 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.099e-20
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  115 NASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQTRRASEGKGHQVGTVIPPRP----PAPTS 393
             AS  F+CNICLE   + VV++CGHLYCWPC+++WL +  + Q   +CPVCK+ +SR  +VPLY  G        K        PPRP    PAP S
Sbjct:   20 GASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQ---ECPVCKAGISREKVVPLYGRGSQ------KPQDPRLKTPPRPQGQRPAPES 107          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.099e-20
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  115 NASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQTRRASEGKGHQVGTVIPPRP----PAPTS 393
             AS  F+CNICLE   + VV++CGHLYCWPC+++WL +  + Q   +CPVCK+ +SR  +VPLY  G        K        PPRP    PAP S
Sbjct:   20 GASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQ---ECPVCKAGISREKVVPLYGRGSQ------KPQDPRLKTPPRPQGQRPAPES 107          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RN185_CHICK (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.007e-20
Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  100 ADSDTNASGGFDCNICLERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQT 321
            A  +TN    F+CNICL+  +D V++LCGHL+CWPC+++WL +    Q    CPVCK+ +SR  ++PLY  G T
Sbjct:   29 AGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQ---VCPVCKAGISRDKVIPLYGRGST 99          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RN185_MOUSE (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.376e-19
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  112 TNASGG----FDCNICLERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQT 321
            T  SGG    F+CNICL+  +D V++LCGHL+CWPC+++WL +    Q    CPVCK+ +SR  ++PLY  G T
Sbjct:   27 TGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQ---VCPVCKAGISRDKVIPLYGRGST 97          
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Match: RN185_RAT (E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus OX=10116 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.986e-19
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  121 SGG----FDCNICLERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKSQCPVCKSEVSRSSLVPLYCHGQT 321
            SGG    F+CNICL+  +D V++LCGHL+CWPC+++WL +    Q    CPVCK+ +SR  ++PLY  G T
Sbjct:   30 SGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQ---VCPVCKAGISRDKVIPLYGRGST 97          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06545 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RMA1_CAPAN3.173e-4943.13E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum ann... [more]
RMA1_ARATH2.109e-3836.48E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis th... [more]
RMA3_ARATH5.806e-2938.64E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis th... [more]
RMA2_ARATH7.268e-2646.60E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis th... [more]
RNF5_HUMAN1.949e-2045.36E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens O... [more]
RNF5_RAT2.099e-2045.36E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegi... [more]
RNF5_MOUSE2.099e-2045.36E3 ubiquitin-protein ligase RNF5 OS=Mus musculus O... [more]
RN185_CHICK3.007e-2047.30E3 ubiquitin-protein ligase RNF185 OS=Gallus gallu... [more]
RN185_MOUSE1.376e-1948.65E3 ubiquitin-protein ligase RNF185 OS=Mus musculus... [more]
RN185_RAT8.986e-1949.30E3 ubiquitin-protein ligase RNF185 OS=Rattus norve... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 46..89
e-value: 1.5E-10
score: 51.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 46..90
score: 13.478
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 46..89
e-value: 2.6E-10
score: 40.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 27..114
e-value: 9.0E-19
score: 69.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..169
NoneNo IPR availableCDDcd16745RING-HC_AtRMA_likecoord: 44..91
e-value: 1.99576E-24
score: 88.5152
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 43..103
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 61..70

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_06545_La_Tanjil_v1.0 ID=rna-TanjilR_06545_La_Tanjil_v1.0; Name=rna-TanjilR_06545; organism=Lupinus angustifolius; type=mRNA; length=673bp
ATGGCCATGGATCAGTACTTTGAGGAGGCTGTGCCTGAAATCGGTTCCTT
TGAAGATAAACCATATTCGGGAAAATGGAAATCTTCCAGTGATGTCATTG
CAGATTCCGATACAAATGCATCTGGTGGCTTTGACTGCAACATCTGCTTA
GAGCGTGTCGAAGATCCAGTGGTCACTCTTTGTGGTCATCTCTACTGCTG
GCCTTGCATCTATAAATGGCTCTCTTCCGAAACAGAAGAGCAGCAGAAGT
CACAATGTCCAGTATGCAAATCCGAAGTTTCTCGATCCTCCCTAGTTCCG
TTGTATTGCCACGGCCAAACTAGAAGAGCTTCTGAAGGAAAGGGTCATCA
AGTAGGGACAGTCATACCGCCAAGACCCCCAGCTCCGACATCTTATAATA
CTACATCTGCTTCCCATCCTACTTCTCAAAGCTatcatcgtcatcatcct
catcatccttatcatccTCATTATCCGCAACAATTGAACTCAATTCCAAC
CAGTTACACTTCACCAATGCTTAGCACAAGTAGTTTGCAAGACATGCCAT
TTGGACTCTTTGGTGGTATGATATATTCTAGGGTCTTTAGTAACCAGGTG
ACAGACATTTTTACAAATCCAAATTCATATGATAACTCATGGAACAGTAA
CCCAAGGTTCAGAAGTCATTTGA
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protein sequence of rna-TanjilR_06545_La_Tanjil_v1.0

>rna-TanjilR_06545_La_Tanjil_v1.0 ID=rna-TanjilR_06545_La_Tanjil_v1.0; Name=rna-TanjilR_06545_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=196bp
MAMDQYFEEAVPEIGSFEDKPYSGKWKSSSDVIADSDTNASGGFDCNICL
ERVEDPVVTLCGHLYCWPCIYKWLSSETEEQQKSQCPVCKSEVSRSSLVP
LYCHGQTRRASEGKGHQVGTVIPPRPPAPTSYNTTSASHPTSQSYHRHHP
HHPYHPHYPQQLNSIPTSYTSPMLSTSSLQDMPFGLFGVTQGSEVI
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mRNA from alignment at Chr_LG13-CM007373.1:3507932..3508604+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_06545_La_Tanjil_v1.0 ID=rna-TanjilR_06545_La_Tanjil_v1.0; Name=rna-TanjilR_06545; organism=Lupinus angustifolius; type=mRNA; length=673bp; location=Sequence derived from: Chr_LG13-CM007373.1:3507932..3508604+ (Lupinus angustifolius
ATGGCCATGGATCAGTACTTTGAGGAGGCTGTGCCTGAAATCGGTTCCTT TGAAGATAAACCATATTCGGGAAAATGGAAATCTTCCAGTGATGTCATTG CAGATTCCGATACAAATGCATCTGGTGGCTTTGACTGCAACATCTGCTTA GAGCGTGTCGAAGATCCAGTGGTCACTCTTTGTGGTCATCTCTACTGCTG GCCTTGCATCTATAAATGGCTCTCTTCCGAAACAGAAGAGCAGCAGAAGT CACAATGTCCAGTATGCAAATCCGAAGTTTCTCGATCCTCCCTAGTTCCG TTGTATTGCCACGGCCAAACTAGAAGAGCTTCTGAAGGAAAGGGTCATCA AGTAGGGACAGTCATACCGCCAAGACCCCCAGCTCCGACATCTTATAATA CTACATCTGCTTCCCATCCTACTTCTCAAAGCTatcatcgtcatcatcct catcatccttatcatccTCATTATCCGCAACAATTGAACTCAATTCCAAC CAGTTACACTTCACCAATGCTTAGCACAAGTAGTTTGCAAGACATGCCAT TTGGACTCTTTGGTGGTATGATATATTCTAGGGTCTTTAGTAACCAGGTG ACAGACATTTTTACAAATCCAAATTCATATGATAACTCATGGAACAGTAA CCCAAGGTTCAGAAGTCATTTGA
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Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3507932..3508604+

>rna-TanjilR_06545_La_Tanjil_v1.0 ID=rna-TanjilR_06545_La_Tanjil_v1.0; Name=rna-TanjilR_06545; organism=Lupinus angustifolius; type=CDS; length=591bp; location=Sequence derived from: Chr_LG13-CM007373.1:3507932..3508604+ (Lupinus angustifolius
ATGGCCATGGATCAGTACTTTGAGGAGGCTGTGCCTGAAATCGGTTCCTT
TGAAGATAAACCATATTCGGGAAAATGGAAATCTTCCAGTGATGTCATTG
CAGATTCCGATACAAATGCATCTGGTGGCTTTGACTGCAACATCTGCTTA
GAGCGTGTCGAAGATCCAGTGGTCACTCTTTGTGGTCATCTCTACTGCTG
GCCTTGCATCTATAAATGGCTCTCTTCCGAAACAGAAGAGCAGCAGAAGT
CACAATGTCCAGTATGCAAATCCGAAGTTTCTCGATCCTCCCTAGTTCCG
TTGTATTGCCACGGCCAAACTAGAAGAGCTTCTGAAGGAAAGGGTCATCA
AGTAGGGACAGTCATACCGCCAAGACCCCCAGCTCCGACATCTTATAATA
CTACATCTGCTTCCCATCCTACTTCTCAAAGCTatcatcgtcatcatcct
catcatccttatcatccTCATTATCCGCAACAATTGAACTCAATTCCAAC
CAGTTACACTTCACCAATGCTTAGCACAAGTAGTTTGCAAGACATGCCAT
TTGGACTCTTTGGTGTAACCCAAGGTTCAGAAGTCATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding