rna-TanjilR_06544
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 3.577e-106 Identity = 178/409 (43.52%), Postives = 262/409 (64.06%), Query Frame = 3 Query: 1206 FVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIY-DIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIM-ERGHFSVATYDKLLSYVRGEIPETKAFDLMKEDYYLKADEV 2426 F Q+S+WMS R + GD+AIRLDLIAKV G EAEK+F++I R++ +YGALLNCYA K + KAE + Q++KE + + YNVML LY R G + + L +EM + + DIFT+ L++Y D+ GMEK LM+ EAD + LDW TY+ AN YIKAG K+ ML+KSEQ+VN + R++AYE L++ Y G+K++VYR+W+ K L+ N+ Y+ ++SAL K++DI+ EKI+EEWE+G++ FDIRIP+++I+ YCK G+MEKAE + L++ + STW+RLA GY ++ AV K+AI PGW+P+ L +C+D+++ + D++ +IL ++ ERGH S YD+LL + G K D M + Y++ EV Sbjct: 86 FSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGC---LPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS---YDQLLYDMNGAGLSWKIVDAMGKGRYVEEREV 488
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.069e-59 Identity = 123/369 (33.33%), Postives = 206/369 (55.83%), Query Frame = 3 Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIY-DIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCK-NLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGP---PGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMERG 2312 ++SE M ER ++ D AI LDL+AK E YF + + S+ YG+LLNCY + EKAE ++ K+KE T +SYN ++ LY + G+ EK + QE+ ++N+ D +T W+ + DI+G+E+++ +M D + DW TYS A+ Y+ AG K++ L++ E + N + AY+ L+T+Y +G+ +VYR+W + + + N +Y+ M+ L KLND+ GAE + +EW++ + +DIRI NV+I AY + GL++KA E+ + G +LN TW+ Y D+ A+ + KA+ G W P T+ A + + ++K D++ A +L I++ G Sbjct: 76 KLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKE---LNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELE-MKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNG 439
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 4.682e-59 Identity = 124/368 (33.70%), Postives = 211/368 (57.34%), Query Frame = 3 Query: 1221 QVSEWMSSE-RNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHS-RNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILA-GPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMERG 2312 +V +WM++ L + D AI+LDLI KV G +AE++F + + +D +VYG+LLN Y + KS EKAEA++ +++ + +NVM+ LY + +++K D + EM K+I DI++ WL+S + + ME + QM++D I +W T+S A YIK G+ K++ L+K E + G+ R Y LL++Y +G K ++YRVW+ K++ S N Y ++S+L ++ DI+GAEK+ EEW + +D RIPN++++AY KN +E AE + +++ G + + STW+ LA G+ I A+ L+ A A G W+P + L+ +E+ D+ +L ++ + Sbjct: 120 EVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHP---LPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR-NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQS 483
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.369e-55 Identity = 117/362 (32.32%), Postives = 202/362 (55.80%), Query Frame = 3 Query: 1200 RSFVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIY-DIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSR-NSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKA--ILAGPPGWKPYLSTLAACIDHVKEKGDL 2273 + F+ +VS+WM+ + A+ LDLI +V+G AE+YF+++ + ++ K YGALLNCY + ++VEK+ +K+KE ++ ++YN ++ LY +G HEK + +EM +N+ D ++ R +N++ D+ + L ME IT+DW TY++AA YI G ++ +LK SE + K Y L+T+YA +G+K +V R+W+ K++ R N Y+ +L +L K++ + AE++L EW+S C+D R+PN +I Y + EKAEA +E L + G +W+ +A Y ++NA +K A + G W+P L+ + + + V ++G L Sbjct: 71 KRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSS---LTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKK-DGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSL 428
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.805e-51 Identity = 117/385 (30.39%), Postives = 210/385 (54.55%), Query Frame = 3 Query: 1197 IRSFVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIYDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCK-NLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMER-GHFSVATYDKLL 2345 I+ + ++ EWM + ++ L +GD A+ LDLI+K+ G + AEK+F+ + D R +LL+ Y Q+K +KAEA+ +K+ E ++ + YN ML +Y G EK L +E+ + DI T WL ++ + D+ G EK+ ++ + + + DW+TYS+ N Y K K+ LK+ E+LV+ K R AY SL++++A +G KD V W K K + ++ Y+ M+SA+ KL + + A+ + +EWES + D RIPN++++ Y + E + ER+++ G + STW+ L Y D++ + KAI W + + ++E+G++ A +++T++++ G+ + Y+ LL Sbjct: 106 IKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKS---CLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS-KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI-DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.650e-48 Identity = 116/406 (28.57%), Postives = 217/406 (53.45%), Query Frame = 3 Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKV----YGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVS---YNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNL-NHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKA-ILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMER-GHFSVATYDKLLS-YVRGEIPETKAFDLMKED 2402 Q+ EWM +++++ DIA+RLDLI K HG + E+YF+ + +S +V Y LL Y ++K V++AEA+M+K+ +V+ +N M++LY G +EK + M I ++ + W+N+ + +E + +M D + + W + AN YIK+G K+ +L+ +E+++N + R Y L+T+YA +G K+ V R+W K++ +Y+C+LS+L K D++ AE++ EWE+ +D+R+ NV++ AY +NG + KAE+ +L+ G N TW+ L G+ C +++ A+ + + +L W+P + + A ++ +++ ++ A + + R G S+ Y LL + + P +++MK D Sbjct: 91 QMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKL------NGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN-RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLD 489
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 5.570e-45 Identity = 124/381 (32.55%), Postives = 192/381 (50.39%), Query Frame = 3 Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIYDI-FTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCK----NLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEIL-TIMERGHFSVATYDKLL 2345 ++ EWM + + D AIRL+LIAK G + AE YF+S+ D+ ++ YG+LLNCY K KA+A + + + +N ++ +Y +G EK L M K+I T W+ S + KD++G+EK+L +M+A+ W T++ A YIK G + K++ LK E +N +R + Y L+ +Y I +VYRVW+ K N+N NSSY+ ML AL+KL+DIDG +K+ EWES +D+R+ NV IS+Y K + E+AEA +K L + D A+ + A+L W +++ H +E D+D A E T+ + S TY L+ Sbjct: 93 EIFEWME-RKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENM---VDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVR-DCYHFLINLYTGIANASEVYRVWDLLKKRYPNVN---NSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLM 465
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 6.003e-44 Identity = 111/285 (38.95%), Postives = 163/285 (57.19%), Query Frame = 3 Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQH-KSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKN-LNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAE 2066 QVSEWMS E+ +L+ D A RL LI V G +EAEK+F+SI +R VY +LLN YA+ K++ KAEA QK+++ V YN M+ LY+ + + EK + L EM ++ D T+ N L Y D+ MEK L + E I L+W T A Y++A K+ ML+ +EQLV+ K ++AY+ L+ +Y G +++V RVW K+ + N+ Y ++ +L K++DI GAE+I + WES FD RIP ++ S Y G+ EKAE Sbjct: 89 QVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRP---VPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAE 370 HSP 2 Score: 61.6178 bits (148), Expect = 1.865e-8 Identity = 53/184 (28.80%), Postives = 79/184 (42.93%), Query Frame = 3 Query: 1200 RSFVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKS 1748 + F QVSEWM ++ +L D A RL L V G +EAEKYF++I + +D+ VY ALL+ YA+ + K ++V D + +EM N+ D+ T+ + L Y I ME + + + I L+ T A Y+KAG KS Sbjct: 414 KQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAK-----------------SDKNLGNMV-------------------DEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMRRWGTEDGIKLERGTMIAMAKAYVKAGLTKKS 561
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.172e-39 Identity = 98/294 (33.33%), Postives = 162/294 (55.10%), Query Frame = 3 Query: 1218 YQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFK-VYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIYDI-FTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSRNS-SYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLK 2090 +++ +WM +R + D AI LDLI K G + AE YF+++ ++++ + YGAL+NCY EKA+A + + E + + +N M+ +Y R+ EK L M + I T W+ S + D++G+EK++ +M D W T+S A Y KAG + K+D+ LK E+ +N R+++ L+++YA I + +VYRVW K N+ SY+ ML A++KL D+DG +KI EWES +D+R+ N+ I+ Y K + E+AE ++ +K Sbjct: 123 FEIFDWME-KRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDE---LNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPN-NRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMK 411
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.468e-31 Identity = 89/283 (31.45%), Postives = 147/283 (51.94%), Query Frame = 3 Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKY----DNLKQEMISKNIYDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSRNS-SYVCMLSALAKLNDIDGAEKILEEW-ESGNTCFDIRIPNVMISAYCKNGL 2051 +V+EWM + D A R+DLI+KV G D AE+YF+ + S+ + Y +LL+ YA K E+AEA+ ++I E S T ++YN M+ LY VG EK + LKQ+ +S DIFT WL+S +I+ + K+L +M D W+ Y + YI + + +++ L + + Y+ L+ ++ +G K + ++W +N N +S SY+C+LS+ L + AE+I+ +W ES T FD +++A+ GL Sbjct: 108 EVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIE--SDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSP---DIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGL 385 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544; organism=Lupinus angustifolius; type=mRNA; length=2486bpback to top protein sequence of rna-TanjilR_06544_La_Tanjil_v1.0 >rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=502bpback to top mRNA from alignment at Chr_LG13-CM007373.1:3510096..3512581- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544; organism=Lupinus angustifolius; type=mRNA; length=2486bp; location=Sequence derived from: Chr_LG13-CM007373.1:3510096..3512581- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3510096..3512581- >rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544; organism=Lupinus angustifolius; type=CDS; length=1509bp; location=Sequence derived from: Chr_LG13-CM007373.1:3510096..3512581- (Lupinus angustifoliusback to top |