rna-TanjilR_06544

Transcript Overview
Namerna-TanjilR_06544
Unique Namerna-TanjilR_06544_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length2486
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG13-CM007373.1supercontigChr_LG13-CM007373.1:3510096..3512581 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananR246Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR250Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0307Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0316Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0337Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0263Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0268Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0339Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0340Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0309Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0333Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0255Pisum sativum Cameor genome v1aPisum sativum
anpvR0320Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0322Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0331Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0258Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0274Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0290Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0290Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0298Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0305Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0343Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0350Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0281Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0298Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0261Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0262Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0301Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0277Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0242Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0289Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0304Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0319Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0321Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0237Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0283Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0294Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0324Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0264Cicer arietinum
ancarR0295Cicer arietinum
anccaR0238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0256Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0284Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0322Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0324Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0340Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0284Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0301Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0311Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0292Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0289Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0317Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0319Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0316Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0318Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0335Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0334Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR0243Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0326Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0331Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0262Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0339Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.005G104300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_11531.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_14084Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_18005.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
LR48_mrnaVigan09g244600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun06g202200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun05g215800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr06.2073Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cr_00637.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.1g048760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr05.2071Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr05.1000790Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.07G073200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg38250.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_02697.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-KK1_024780Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_05G00329.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat5g271360.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.1g033160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0751100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_00612.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cc_v2.0_23989.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_00298Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058924032.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_004487234.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg43854.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun05g215800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigst.05G032500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.05G041200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_03049Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_06544gene-TanjilG_06544_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06544rna-TanjilR_06544_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_06544_La_Tanjil_v1.0rna-TanjilR_06544_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06544_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3512336..3512581rna-TanjilR_06544_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3512336..3512581Lupinus angustifoliusCDS
rna-TanjilR_06544_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3510096..3511358rna-TanjilR_06544_La_Tanjil_v1.0-CDS-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3510096..3511358Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06544_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3512336..3512581rna-TanjilR_06544_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3512336..3512581Lupinus angustifoliusexon
rna-TanjilR_06544_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3510096..3511358rna-TanjilR_06544_La_Tanjil_v1.0-exon-Chr_LG13-CM007373.1_La_Tanjil_v1.0-1579734366:3510096..3511358Lupinus angustifoliusexon


Homology
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 3.577e-106
Identity = 178/409 (43.52%), Postives = 262/409 (64.06%), Query Frame = 3
Query: 1206 FVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIY-DIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIM-ERGHFSVATYDKLLSYVRGEIPETKAFDLMKEDYYLKADEV 2426
            F    Q+S+WMS  R   +  GD+AIRLDLIAKV G  EAEK+F++I    R++ +YGALLNCYA  K + KAE + Q++KE    +     + YNVML LY R G +   + L +EM  + +  DIFT+   L++Y    D+ GMEK LM+ EAD  + LDW TY+  AN YIKAG   K+  ML+KSEQ+VN + R++AYE L++ Y   G+K++VYR+W+  K L+   N+ Y+ ++SAL K++DI+  EKI+EEWE+G++ FDIRIP+++I+ YCK G+MEKAE  +  L++     + STW+RLA GY     ++ AV   K+AI    PGW+P+   L +C+D+++ + D++   +IL ++ ERGH S   YD+LL  + G     K  D M +  Y++  EV
Sbjct:   86 FSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGC---LPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS---YDQLLYDMNGAGLSWKIVDAMGKGRYVEEREV 488          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.069e-59
Identity = 123/369 (33.33%), Postives = 206/369 (55.83%), Query Frame = 3
Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIY-DIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCK-NLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGP---PGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMERG 2312
            ++SE M  ER ++    D AI LDL+AK       E YF  + + S+    YG+LLNCY +    EKAE ++ K+KE      T   +SYN ++ LY + G+ EK   + QE+ ++N+  D +T   W+ +     DI+G+E+++ +M  D  +  DW TYS  A+ Y+ AG   K++  L++ E + N +    AY+ L+T+Y  +G+  +VYR+W   +  +  + N +Y+ M+  L KLND+ GAE + +EW++  + +DIRI NV+I AY + GL++KA    E+  + G +LN  TW+     Y    D+  A+  + KA+  G      W P   T+ A + + ++K D++ A  +L I++ G
Sbjct:   76 KLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKE---LNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELE-MKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNG 439          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 4.682e-59
Identity = 124/368 (33.70%), Postives = 211/368 (57.34%), Query Frame = 3
Query: 1221 QVSEWMSSE-RNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHS-RNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILA-GPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMERG 2312
            +V +WM++      L + D AI+LDLI KV G  +AE++F  + +  +D +VYG+LLN Y + KS EKAEA++  +++          + +NVM+ LY  + +++K D +  EM  K+I  DI++   WL+S  +   +  ME +  QM++D  I  +W T+S  A  YIK G+  K++  L+K E  + G+  R  Y  LL++Y  +G K ++YRVW+  K++  S  N  Y  ++S+L ++ DI+GAEK+ EEW    + +D RIPN++++AY KN  +E AE   + +++ G + + STW+ LA G+     I  A+  L+ A  A G   W+P +  L+      +E+ D+     +L ++ + 
Sbjct:  120 EVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHP---LPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR-NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQS 483          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.369e-55
Identity = 117/362 (32.32%), Postives = 202/362 (55.80%), Query Frame = 3
Query: 1200 RSFVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIY-DIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSR-NSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKA--ILAGPPGWKPYLSTLAACIDHVKEKGDL 2273
            + F+   +VS+WM+          + A+ LDLI +V+G   AE+YF+++ +  ++ K YGALLNCY + ++VEK+    +K+KE     ++   ++YN ++ LY  +G HEK   + +EM  +N+  D ++ R  +N++    D+  +   L  ME    IT+DW TY++AA  YI  G   ++  +LK SE  +  K     Y  L+T+YA +G+K +V R+W+  K++   R N  Y+ +L +L K++ +  AE++L EW+S   C+D R+PN +I  Y    + EKAEA +E L + G      +W+ +A  Y     ++NA   +K A  +  G   W+P L+ + + +  V ++G L
Sbjct:   71 KRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSS---LTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKK-DGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSL 428          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.805e-51
Identity = 117/385 (30.39%), Postives = 210/385 (54.55%), Query Frame = 3
Query: 1197 IRSFVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIYDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCK-NLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMER-GHFSVATYDKLL 2345
            I+ +    ++ EWM  + ++ L +GD A+ LDLI+K+ G + AEK+F+ + D  R      +LL+ Y Q+K  +KAEA+ +K+ E    ++    + YN ML +Y   G  EK   L +E+  +   DI T   WL ++ +  D+ G EK+ ++ + +  +  DW+TYS+  N Y K     K+   LK+ E+LV+ K  R AY SL++++A +G KD V   W K K +     ++ Y+ M+SA+ KL + + A+ + +EWES +   D RIPN++++ Y     +   E + ER+++ G   + STW+ L   Y    D++  +    KAI      W   +  +      ++E+G++  A +++T++++ G+ +   Y+ LL
Sbjct:  106 IKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKS---CLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS-KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI-DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.650e-48
Identity = 116/406 (28.57%), Postives = 217/406 (53.45%), Query Frame = 3
Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKV----YGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVS---YNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNL-NHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKA-ILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMER-GHFSVATYDKLLS-YVRGEIPETKAFDLMKED 2402
            Q+ EWM +++++     DIA+RLDLI K HG  + E+YF+ +  +S   +V    Y  LL  Y ++K V++AEA+M+K+           +V+   +N M++LY   G +EK   +   M    I  ++ +   W+N+      +  +E +  +M  D  + + W +    AN YIK+G   K+  +L+ +E+++N +  R  Y  L+T+YA +G K+ V R+W   K++       +Y+C+LS+L K  D++ AE++  EWE+    +D+R+ NV++ AY +NG + KAE+    +L+ G   N  TW+ L  G+  C +++ A+  + +  +L     W+P  + + A  ++ +++  ++ A   +  + R G  S+  Y  LL  +   + P    +++MK D
Sbjct:   91 QMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKL------NGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN-RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLD 489          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 5.570e-45
Identity = 124/381 (32.55%), Postives = 192/381 (50.39%), Query Frame = 3
Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIYDI-FTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCK----NLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPTLKKAILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEIL-TIMERGHFSVATYDKLL 2345
            ++ EWM   + +     D AIRL+LIAK  G + AE YF+S+ D+ ++   YG+LLNCY   K   KA+A  + +            + +N ++ +Y  +G  EK   L   M  K+I     T   W+ S  + KD++G+EK+L +M+A+      W T++  A  YIK G + K++  LK  E  +N  +R + Y  L+ +Y  I    +VYRVW+  K    N+N   NSSY+ ML AL+KL+DIDG +K+  EWES    +D+R+ NV IS+Y K  + E+AEA     +K            L       +  D A+   + A+L     W      +++   H +E  D+D A E   T+ +    S  TY  L+
Sbjct:   93 EIFEWME-RKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENM---VDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVR-DCYHFLINLYTGIANASEVYRVWDLLKKRYPNVN---NSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLM 465          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 6.003e-44
Identity = 111/285 (38.95%), Postives = 163/285 (57.19%), Query Frame = 3
Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQH-KSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKN-LNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAE 2066
            QVSEWMS E+  +L+  D A RL LI  V G +EAEK+F+SI   +R   VY +LLN YA+  K++ KAEA  QK+++          V YN M+ LY+ + + EK + L  EM   ++  D  T+ N L  Y    D+  MEK L + E    I L+W T    A  Y++A    K+  ML+ +EQLV+ K  ++AY+ L+ +Y   G +++V RVW   K+ +    N+ Y  ++ +L K++DI GAE+I + WES    FD RIP ++ S Y   G+ EKAE
Sbjct:   89 QVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRP---VPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAE 370          

HSP 2 Score: 61.6178 bits (148), Expect = 1.865e-8
Identity = 53/184 (28.80%), Postives = 79/184 (42.93%), Query Frame = 3
Query: 1200 RSFVCLYQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNI-YDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKS 1748
            + F    QVSEWM  ++  +L   D A RL L   V G +EAEKYF++I +  +D+ VY ALL+ YA+                 + K   ++V                   D + +EM   N+  D+ T+ + L  Y     I  ME  + +   +  I L+  T    A  Y+KAG   KS
Sbjct:  414 KQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAK-----------------SDKNLGNMV-------------------DEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMRRWGTEDGIKLERGTMIAMAKAYVKAGLTKKS 561          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.172e-39
Identity = 98/294 (33.33%), Postives = 162/294 (55.10%), Query Frame = 3
Query: 1218 YQVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFK-VYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIYDI-FTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSRNS-SYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMISAYCKNGLMEKAEAYIERLLK 2090
            +++ +WM  +R +     D AI LDLI K  G + AE YF+++  ++++ +  YGAL+NCY      EKA+A  + + E       +  + +N M+ +Y R+   EK   L   M  + I     T   W+ S  +  D++G+EK++ +M  D      W T+S  A  Y KAG + K+D+ LK  E+ +N    R+++  L+++YA I +  +VYRVW   K      N+ SY+ ML A++KL D+DG +KI  EWES    +D+R+ N+ I+ Y K  + E+AE  ++  +K
Sbjct:  123 FEIFDWME-KRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDE---LNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPN-NRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMK 411          
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.468e-31
Identity = 89/283 (31.45%), Postives = 147/283 (51.94%), Query Frame = 3
Query: 1221 QVSEWMSSERNLHLLSGDIAIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAEAIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKY----DNLKQEMISKNIYDIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIKAGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKCKNLNHSRNS-SYVCMLSALAKLNDIDGAEKILEEW-ESGNTCFDIRIPNVMISAYCKNGL 2051
            +V+EWM       +   D A R+DLI+KV G D AE+YF+ +   S+  + Y +LL+ YA  K  E+AEA+ ++I E  S   T   ++YN M+ LY  VG  EK     + LKQ+ +S    DIFT   WL+S     +I+ + K+L +M  D      W+ Y    + YI + +   +++ L    +    +     Y+ L+ ++  +G K  + ++W   +N N   +S SY+C+LS+   L  +  AE+I+ +W ES  T FD      +++A+   GL
Sbjct:  108 EVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIE--SDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSP---DIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGL 385          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06544 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PP166_ARATH3.577e-10643.52Pentatricopeptide repeat-containing protein At2g20... [more]
PPR86_ARATH1.069e-5933.33Pentatricopeptide repeat-containing protein At1g60... [more]
PPR3_ARATH4.682e-5933.70Pentatricopeptide repeat-containing protein At1g02... [more]
PP334_ARATH3.369e-5532.32Pentatricopeptide repeat-containing protein At4g21... [more]
PP302_ARATH1.805e-5130.39Pentatricopeptide repeat-containing protein At4g02... [more]
PP400_ARATH2.650e-4828.57Pentatricopeptide repeat-containing protein At5g27... [more]
PP300_ARATH5.570e-4532.55Pentatricopeptide repeat-containing protein At4g01... [more]
PPR61_ARATH6.003e-4438.95Putative pentatricopeptide repeat-containing prote... [more]
PPR4_ARATH1.172e-3933.33Pentatricopeptide repeat-containing protein At1g02... [more]
PP372_ARATH4.468e-3131.45Pentatricopeptide repeat-containing protein At5g09... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 304..497
e-value: 6.3E-20
score: 73.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 164..273
e-value: 4.3E-10
score: 41.2
coord: 47..163
e-value: 5.4E-7
score: 31.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 112..414
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 169..199
e-value: 1.7E-4
score: 19.5
coord: 132..159
e-value: 6.9E-4
score: 17.6
coord: 347..376
e-value: 5.6E-5
score: 21.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 347..373
e-value: 7.1E-6
score: 25.9
coord: 132..159
e-value: 0.0072
score: 16.5
coord: 310..335
e-value: 0.016
score: 15.4
coord: 169..199
e-value: 0.0062
score: 16.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 167..201
score: 8.199
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 377..411
score: 6.807
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 273..303
score: 5.272
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..267
score: 5.601
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 415..449
score: 5.24
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 307..341
score: 6.993
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 342..376
score: 9.525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 129..163
score: 8.385

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544; organism=Lupinus angustifolius; type=mRNA; length=2486bp
ATGATGAAGCTTCTTCGCTCAAAATGGAACCTTTACACCACAACCCTTCG
TGTTTACACTTCTTCAGCAGCTTCACCTCAAAGCGATTCTCTTTTCCTTC
GAATTTCCAGAGCCGGAGACCCAAACATTTCCACAACTCTTATTCTCAAC
CAATGGGTTCAAGAAGGCAGAGATGTTATTCATTCTGAGCTTCAGTTTTT
CATCAAACAACTTAGATCATATCGTCGCTTCAACCATGCCCTTCAGGTTT
TTCCCTTTTTTTAATAAATATTCAATTTCTAGATTCCTTTTTATGAACAG
TAAAGGATATCATTTGTAAATATTTCATTGTTCTGATTTTAAATATAAGT
CAGGTGTATTTGAATTTGATGTATAGTTTAAGTTCCTTCTTTTGATTATA
GATTTAGAAAAGTTATTATCATTTACCAGGTGAATCAATACATGATGATA
AAGGTAGTAGTTTTCTTTTAAAGAGATAATTTGTTTAATTTCTAGTTTGT
ACTACCTAGGACTTGAAATTAGTTATTATTGTGGTAATGGATAGATATAT
CTAACTACAACCATTATTTTGGAAAATAAAGAAGTACTACATTAATAGAA
CTGAACAATTTGAGCAACATACAATTTAAAAAAACTGTAACATAAGGGTG
GCGATCCTTTCCATTACTGATCGGTCTAGCACTGGACAATGTAGTACTGG
AATATGAGGCTTAGATTGGTTTGATGATTTAAAATTAATTTAAAATATGC
TACATTAATTTTTTAAATGTCACATGTCACCATCACCTCCTGTACTGGAG
AGGATCCAATTTTTAACATAAAGCGTCTTAAGTTTTTTGAGTTAAGATCA
TTTATGTGATTTTAAATTTTCGATTTTTGATAAAGGTAAGCTCCCACTCC
CAATTGGAAAAAAAAACGTGGACGAGCTCATTCATATCTTACAATATGAA
ACACAAATCTTTGAAAGGATCAAAAGAGCCTTATTAAATAATCAAAGATG
TAAAGTTGCTCCGTTAACATGATTTATGACAGAGCATTATGATGTCGTTC
GGTCCATTTGGCTGACTCCATCTAGTGGGATTAAGACTTGGTTGTTGTTA
TTCTGTTTTGCCTGTAATTAGTCTATCACAACTTAAAATTTGTTCTCAAG
TTCTGTGTAGTCTGTAAAATTTAGTTCGGTATTATTGAAGACCATTATTA
GATCATTTGTTTGCTTGTATCAGGTATCAGAGTGGATGAGCAGTGAAAGA
AACCTTCATTTATTATCCGGGGACATTGCAATACGTCTTGATTTAATTGC
AAAAGTCCATGGCCAAGATGAAGCAGAGAAATATTTTGATAGCATTTCAG
ATGCTTCAAGAGATTTCAAGGTCTATGGTGCTCTTTTGAACTGCTATGCA
CAACACAAATCTGTGGAGAAAGCAGAGGCAATCATGCAAAAAATAAAAGA
GAATGCTTCCAAACAGGCTACAGACTTAGTAGTCAGTTATAATGTTATGT
TAAGACTCTATGCCCGAGTAGGTGATCATGAGAAATATGATAATCTAAAG
CAAGAAATGATTTCGAAGAACATATATGACATTTTTACACTTAGAAATTG
GTTGAATTCTTATGTGACTGCTAAAGACATCAATGGGATGGAGAAGCTAC
TAATGCAAATGGAAGCTGATCCTGTGATAACTTTGGATTGGTTAACATAC
TCAATTGCAGCAAATTGTTATATTAAAGCTGGCCAATTTTACAAATCCGA
TGCAATGCTGAAGAAATCGGAGCAATTAGTTAATGGCAAGATGAGGAGGA
ATGCCTATGAATCTCTTCTAACTATGTATGCTGTAATTGGACAAAAGGAC
GATGTGTACCGCGTCTGGAATAAGTGCAAAAATTTAAATCATTCTCGCAA
CTCAAGTTACGTTTGTATGTTAAGCGCTTTAGCGAAGCTGAATGACATTG
ATGGAGCTGAGAAGATTCTAGAGGAATGGGAATCCGGAAATACATGTTTT
GACATCAGAATTCCAAATGTGATGATTAGTGCTTATTGTAAGAATGGTCT
GATGGAAAAGGCTGAAGCATATATTGAGAGGCTTTTAAAAGGAGGCAATG
AATTAAATGGAAGTACATGGGATCGTTTGGCTCATGGTTATTGCAATTGC
AACGATATTGATAATGCAGTTCCGACACTGAAGAAAGCAATCTTGGCAGG
TCCACCAGGATGGAAGCCTTACCTTTCTACTTTGGCTGCATGCATTGATC
ATGTGAAAGAGAAGGGAGATTTGGATTTGGCAATGGAAATTCTTACGATA
ATGGAACGAGGTCATTTCTCTGTTGCCACCTATGATAAATTATTAAGCTA
TGTGCGTGGTGAAATCCCAGAAACAAAAGCTTTTGATCTGATGAAAGAAG
ATTATTATCTTAAGGCTGATGAAGTTCCAGATGGAGAGAAGCAACATGAA
ATGTTGCAAGGAAGAGGTCAGCAACTGAAGCAATGA
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protein sequence of rna-TanjilR_06544_La_Tanjil_v1.0

>rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=502bp
MMKLLRSKWNLYTTTLRVYTSSAASPQSDSLFLRISRAGDPNISTTLILN
QWVQEGRDVIHSELQFFIKQLRSYRRFNHALQVSEWMSSERNLHLLSGDI
AIRLDLIAKVHGQDEAEKYFDSISDASRDFKVYGALLNCYAQHKSVEKAE
AIMQKIKENASKQATDLVVSYNVMLRLYARVGDHEKYDNLKQEMISKNIY
DIFTLRNWLNSYVTAKDINGMEKLLMQMEADPVITLDWLTYSIAANCYIK
AGQFYKSDAMLKKSEQLVNGKMRRNAYESLLTMYAVIGQKDDVYRVWNKC
KNLNHSRNSSYVCMLSALAKLNDIDGAEKILEEWESGNTCFDIRIPNVMI
SAYCKNGLMEKAEAYIERLLKGGNELNGSTWDRLAHGYCNCNDIDNAVPT
LKKAILAGPPGWKPYLSTLAACIDHVKEKGDLDLAMEILTIMERGHFSVA
TYDKLLSYVRGEIPETKAFDLMKEDYYLKADEVPDGEKQHEMLQGRGQQL
KQ
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mRNA from alignment at Chr_LG13-CM007373.1:3510096..3512581-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544; organism=Lupinus angustifolius; type=mRNA; length=2486bp; location=Sequence derived from: Chr_LG13-CM007373.1:3510096..3512581- (Lupinus angustifolius
ATGATGAAGCTTCTTCGCTCAAAATGGAACCTTTACACCACAACCCTTCG TGTTTACACTTCTTCAGCAGCTTCACCTCAAAGCGATTCTCTTTTCCTTC GAATTTCCAGAGCCGGAGACCCAAACATTTCCACAACTCTTATTCTCAAC CAATGGGTTCAAGAAGGCAGAGATGTTATTCATTCTGAGCTTCAGTTTTT CATCAAACAACTTAGATCATATCGTCGCTTCAACCATGCCCTTCAGGTTT TTCCCTTTTTTTAATAAATATTCAATTTCTAGATTCCTTTTTATGAACAG TAAAGGATATCATTTGTAAATATTTCATTGTTCTGATTTTAAATATAAGT CAGGTGTATTTGAATTTGATGTATAGTTTAAGTTCCTTCTTTTGATTATA GATTTAGAAAAGTTATTATCATTTACCAGGTGAATCAATACATGATGATA AAGGTAGTAGTTTTCTTTTAAAGAGATAATTTGTTTAATTTCTAGTTTGT ACTACCTAGGACTTGAAATTAGTTATTATTGTGGTAATGGATAGATATAT CTAACTACAACCATTATTTTGGAAAATAAAGAAGTACTACATTAATAGAA CTGAACAATTTGAGCAACATACAATTTAAAAAAACTGTAACATAAGGGTG GCGATCCTTTCCATTACTGATCGGTCTAGCACTGGACAATGTAGTACTGG AATATGAGGCTTAGATTGGTTTGATGATTTAAAATTAATTTAAAATATGC TACATTAATTTTTTAAATGTCACATGTCACCATCACCTCCTGTACTGGAG AGGATCCAATTTTTAACATAAAGCGTCTTAAGTTTTTTGAGTTAAGATCA TTTATGTGATTTTAAATTTTCGATTTTTGATAAAGGTAAGCTCCCACTCC CAATTGGAAAAAAAAACGTGGACGAGCTCATTCATATCTTACAATATGAA ACACAAATCTTTGAAAGGATCAAAAGAGCCTTATTAAATAATCAAAGATG TAAAGTTGCTCCGTTAACATGATTTATGACAGAGCATTATGATGTCGTTC GGTCCATTTGGCTGACTCCATCTAGTGGGATTAAGACTTGGTTGTTGTTA TTCTGTTTTGCCTGTAATTAGTCTATCACAACTTAAAATTTGTTCTCAAG TTCTGTGTAGTCTGTAAAATTTAGTTCGGTATTATTGAAGACCATTATTA GATCATTTGTTTGCTTGTATCAGGTATCAGAGTGGATGAGCAGTGAAAGA AACCTTCATTTATTATCCGGGGACATTGCAATACGTCTTGATTTAATTGC AAAAGTCCATGGCCAAGATGAAGCAGAGAAATATTTTGATAGCATTTCAG ATGCTTCAAGAGATTTCAAGGTCTATGGTGCTCTTTTGAACTGCTATGCA CAACACAAATCTGTGGAGAAAGCAGAGGCAATCATGCAAAAAATAAAAGA GAATGCTTCCAAACAGGCTACAGACTTAGTAGTCAGTTATAATGTTATGT TAAGACTCTATGCCCGAGTAGGTGATCATGAGAAATATGATAATCTAAAG CAAGAAATGATTTCGAAGAACATATATGACATTTTTACACTTAGAAATTG GTTGAATTCTTATGTGACTGCTAAAGACATCAATGGGATGGAGAAGCTAC TAATGCAAATGGAAGCTGATCCTGTGATAACTTTGGATTGGTTAACATAC TCAATTGCAGCAAATTGTTATATTAAAGCTGGCCAATTTTACAAATCCGA TGCAATGCTGAAGAAATCGGAGCAATTAGTTAATGGCAAGATGAGGAGGA ATGCCTATGAATCTCTTCTAACTATGTATGCTGTAATTGGACAAAAGGAC GATGTGTACCGCGTCTGGAATAAGTGCAAAAATTTAAATCATTCTCGCAA CTCAAGTTACGTTTGTATGTTAAGCGCTTTAGCGAAGCTGAATGACATTG ATGGAGCTGAGAAGATTCTAGAGGAATGGGAATCCGGAAATACATGTTTT GACATCAGAATTCCAAATGTGATGATTAGTGCTTATTGTAAGAATGGTCT GATGGAAAAGGCTGAAGCATATATTGAGAGGCTTTTAAAAGGAGGCAATG AATTAAATGGAAGTACATGGGATCGTTTGGCTCATGGTTATTGCAATTGC AACGATATTGATAATGCAGTTCCGACACTGAAGAAAGCAATCTTGGCAGG TCCACCAGGATGGAAGCCTTACCTTTCTACTTTGGCTGCATGCATTGATC ATGTGAAAGAGAAGGGAGATTTGGATTTGGCAATGGAAATTCTTACGATA ATGGAACGAGGTCATTTCTCTGTTGCCACCTATGATAAATTATTAAGCTA TGTGCGTGGTGAAATCCCAGAAACAAAAGCTTTTGATCTGATGAAAGAAG ATTATTATCTTAAGGCTGATGAAGTTCCAGATGGAGAGAAGCAACATGAA ATGTTGCAAGGAAGAGGTCAGCAACTGAAGCAATGA
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Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3510096..3512581-

>rna-TanjilR_06544_La_Tanjil_v1.0 ID=rna-TanjilR_06544_La_Tanjil_v1.0; Name=rna-TanjilR_06544; organism=Lupinus angustifolius; type=CDS; length=1509bp; location=Sequence derived from: Chr_LG13-CM007373.1:3510096..3512581- (Lupinus angustifolius
ATGATGAAGCTTCTTCGCTCAAAATGGAACCTTTACACCACAACCCTTCG
TGTTTACACTTCTTCAGCAGCTTCACCTCAAAGCGATTCTCTTTTCCTTC
GAATTTCCAGAGCCGGAGACCCAAACATTTCCACAACTCTTATTCTCAAC
CAATGGGTTCAAGAAGGCAGAGATGTTATTCATTCTGAGCTTCAGTTTTT
CATCAAACAACTTAGATCATATCGTCGCTTCAACCATGCCCTTCAGGTAT
CAGAGTGGATGAGCAGTGAAAGAAACCTTCATTTATTATCCGGGGACATT
GCAATACGTCTTGATTTAATTGCAAAAGTCCATGGCCAAGATGAAGCAGA
GAAATATTTTGATAGCATTTCAGATGCTTCAAGAGATTTCAAGGTCTATG
GTGCTCTTTTGAACTGCTATGCACAACACAAATCTGTGGAGAAAGCAGAG
GCAATCATGCAAAAAATAAAAGAGAATGCTTCCAAACAGGCTACAGACTT
AGTAGTCAGTTATAATGTTATGTTAAGACTCTATGCCCGAGTAGGTGATC
ATGAGAAATATGATAATCTAAAGCAAGAAATGATTTCGAAGAACATATAT
GACATTTTTACACTTAGAAATTGGTTGAATTCTTATGTGACTGCTAAAGA
CATCAATGGGATGGAGAAGCTACTAATGCAAATGGAAGCTGATCCTGTGA
TAACTTTGGATTGGTTAACATACTCAATTGCAGCAAATTGTTATATTAAA
GCTGGCCAATTTTACAAATCCGATGCAATGCTGAAGAAATCGGAGCAATT
AGTTAATGGCAAGATGAGGAGGAATGCCTATGAATCTCTTCTAACTATGT
ATGCTGTAATTGGACAAAAGGACGATGTGTACCGCGTCTGGAATAAGTGC
AAAAATTTAAATCATTCTCGCAACTCAAGTTACGTTTGTATGTTAAGCGC
TTTAGCGAAGCTGAATGACATTGATGGAGCTGAGAAGATTCTAGAGGAAT
GGGAATCCGGAAATACATGTTTTGACATCAGAATTCCAAATGTGATGATT
AGTGCTTATTGTAAGAATGGTCTGATGGAAAAGGCTGAAGCATATATTGA
GAGGCTTTTAAAAGGAGGCAATGAATTAAATGGAAGTACATGGGATCGTT
TGGCTCATGGTTATTGCAATTGCAACGATATTGATAATGCAGTTCCGACA
CTGAAGAAAGCAATCTTGGCAGGTCCACCAGGATGGAAGCCTTACCTTTC
TACTTTGGCTGCATGCATTGATCATGTGAAAGAGAAGGGAGATTTGGATT
TGGCAATGGAAATTCTTACGATAATGGAACGAGGTCATTTCTCTGTTGCC
ACCTATGATAAATTATTAAGCTATGTGCGTGGTGAAATCCCAGAAACAAA
AGCTTTTGATCTGATGAAAGAAGATTATTATCTTAAGGCTGATGAAGTTC
CAGATGGAGAGAAGCAACATGAAATGTTGCAAGGAAGAGGTCAGCAACTG
AAGCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding