rna-TanjilR_06535
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.983e-40 Identity = 56/110 (50.91%), Postives = 70/110 (63.64%), Query Frame = 2
Query: 5852 RTRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQVLSSLNMNVLAQLSPISCN*LLALNLTMQPEPEFRPAMSEVVLYLLNMIRRESQQSE 6181
+ R RGEQFLVRWA+PQLHDI+AL+ MVDPSL G YPAKSLS+FAD+ISRC+ Q EPE+RP MSEVV L +MI+RE ++++
Sbjct: 684 KKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCV-----------------------------QSEPEYRPLMSEVVQDLSDMIQREHRRND 764 HSP 2 Score: 83.9593 bits (206), Expect = 1.983e-40 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 1
Query: 5629 QLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSHDR 5769
QLSGQLL AYGYGAPEFE GIYT + DVYSFGVVMLELLTGR+S+D+
Sbjct: 638 QLSGQLLAAYGYGAPEFEYGIYTMKCDVYSFGVVMLELLTGRKSYDK 684 HSP 3 Score: 121.709 bits (304), Expect = 2.537e-26 Identity = 52/78 (66.67%), Postives = 66/78 (84.62%), Query Frame = 3
Query: 4812 LLAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
L AV+KLDK++ +H+++G FLELVNNIDRIRH NIV+L+G+CSEH QRLLI+EYC NG+LHD +H DD K +LSWN
Sbjct: 502 LFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNV 579 HSP 4 Score: 77.411 bits (189), Expect = 1.060e-12 Identity = 42/71 (59.15%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 3730 PTERVIVEPTTFRRGTNVSPARKSSVPLPTFAKYFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGKV 3942
P +RVI + T + KS PL T K+FT+ASLQQ+TNSFS ENLIG GMLGSVYRAELP GK+
Sbjct: 433 PIKRVIAKATEPAEASLKRTTSKSHGPL-TAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKL 502 HSP 5 Score: 69.707 bits (169), Expect = 1.183e-10 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 3
Query: 663 SVAAINSLHAALGSPTLPGWVSSAGDPCGEAWQGVQCNGSSIQRMYVI 806
VAAINSL AL SP LPGWV+S GDPCGE+WQGV CN S ++ + +I
Sbjct: 37 DVAAINSLFLALESPLLPGWVASGGDPCGESWQGVLCNASQVETIILI 84 HSP 6 Score: 21.1718 bits (43), Expect = 1.183e-10 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query: 905 VLNGANLGGELG 940
+L ANLGGELG
Sbjct: 82 ILISANLGGELG 93 HSP 7 Score: 68.1662 bits (165), Expect = 8.252e-10 Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 2
Query: 5312 RYLHEQCQPPVVHRNLKSANIXXXXXXSVRVSDCGLAPLIASGSVSQV 5455
YLHE C PP +HRN KSANILLDDD+ V VSDCGLAPLI+SG+VSQ+
Sbjct: 592 EYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQL 639 HSP 8 Score: 40.0466 bits (92), Expect = 2.652e-8 Identity = 19/20 (95.00%), Postives = 19/20 (95.00%), Query Frame = 1
Query: 1792 QNNHLSGTLDVLQDLPLKDL 1851
QNNHLSG LDVLQDLPLKDL
Sbjct: 202 QNNHLSGELDVLQDLPLKDL 221 HSP 9 Score: 31.187 bits (69), Expect = 2.652e-8 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1
Query: 1465 NENLLTGEIPDAFQSLPVLINL 1530
N NLL+G+IPD FQ L ++IN+
Sbjct: 154 NNNLLSGKIPDVFQDLGLMINI 175 HSP 10 Score: 30.4166 bits (67), Expect = 2.652e-8 Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3
Query: 1635 DLSNNNLSGELPPSVEN 1685
DLS+NNLSG LPPS++N
Sbjct: 176 DLSSNNLSGPLPPSMQN 192
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.258e-34 Identity = 57/111 (51.35%), Postives = 65/111 (58.56%), Query Frame = 2
Query: 5837 RNLLFRTRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQVLSSLNMNVLAQLSPISCN*LLALNLTMQPEPEFRPAMSEVVLYLLNMIRRES 6169
R L +R R EQ LVRWA PQLHDI+ALS MVDPSLNG YPAKSLS FADII+ C+Q PEPEFRP MSEVV L+ +++R S
Sbjct: 596 RKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQ-----------------------------PEPEFRPPMSEVVQQLVRLVQRAS 677 HSP 2 Score: 64.3142 bits (155), Expect = 5.258e-34 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 5629 QLSGQLLTAYGYGAPEFE-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5766
Q+S Q++ ++GY APEF SGIYT +SDVY+FGVVMLELLTGR+ D
Sbjct: 554 QVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLD 600 HSP 3 Score: 94.3597 bits (233), Expect = 6.712e-18 Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = 3
Query: 4812 LLAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
++A+KK+D Q++ +FLE V+N+ R+RH NIV L GYC+EHGQRLL+YEY NG+L D +H++D L+WN
Sbjct: 419 IMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNA 496 HSP 4 Score: 63.1586 bits (152), Expect = 2.222e-8 Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 3724 SSPTERVIVEPTTFRRGTNVSPARKSSVPLPTFAKYFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGKV 3942
SSP E+V V+ R N S +R S P A +T++SLQ TNSFSQEN+IG G LG VYRAE P+GK+
Sbjct: 354 SSPAEKVTVD----RVMKNGSISRIRS---PITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKI 419
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.820e-28 Identity = 55/78 (70.51%), Postives = 66/78 (84.62%), Query Frame = 3
Query: 4812 LLAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
L AVKKLDKR ++ Q+D +F+ELVNNID IRH NIV+L+GYC+EH QRLL+YEYC NG+L D +HSDD FK KLSWNT
Sbjct: 509 LFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNT 586 HSP 2 Score: 117.087 bits (292), Expect = 6.334e-25 Identity = 66/127 (51.97%), Postives = 76/127 (59.84%), Query Frame = 2
Query: 5798 ILFELFMP*IHYFRNLLFRTRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQVLSSLNMNVLAQLSPISCN*LLALNLTMQPEPEFRPAMSEVVLYLLNMIRRESQQS 6178
++ EL + Y R+ R RGEQFLVRWA+PQLHDI+AL MVDPSLNG+YPAKSLS+FADIISRC+Q EPEFRP MSEVV LL+MIRRE S
Sbjct: 678 VMLELLTGRMSYDRD-----RSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQS-----------------------------EPEFRPLMSEVVQDLLDMIRRERHGS 770 HSP 3 Score: 40.4318 bits (93), Expect = 6.996e-22 Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 3
Query: 1623 LLCRDLSNNNLSGELPPSVENLSSLTTLLV 1712
L+ D+S+NN+SG LPPS+ENL +LTTL V
Sbjct: 170 LINLDISSNNISGTLPPSMENLLTLTTLRV 199 HSP 4 Score: 39.6614 bits (91), Expect = 6.996e-22 Identity = 16/24 (66.67%), Postives = 20/24 (83.33%), Query Frame = 3
Query: 1158 DLSNNHIGGSIPSALPVTLKNLYV 1229
D SNN IGGSIPS LPVTL++ ++
Sbjct: 104 DFSNNRIGGSIPSTLPVTLQHFFL 127 HSP 5 Score: 36.965 bits (84), Expect = 6.996e-22 Identity = 17/22 (77.27%), Postives = 19/22 (86.36%), Query Frame = 1
Query: 1786 HLQNNHLSGTLDVLQDLPLKDL 1851
+QNN LSGTLDVLQ LPL+DL
Sbjct: 198 RVQNNQLSGTLDVLQGLPLQDL 219 HSP 6 Score: 35.4242 bits (80), Expect = 6.996e-22 Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 1
Query: 1459 SLNENLLTGEIPDAFQSLPVLINL 1530
SLN+NLL+GE+PD FQ+L LINL
Sbjct: 150 SLNDNLLSGELPDVFQNLVGLINL 173 HSP 7 Score: 34.6538 bits (78), Expect = 6.996e-22 Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 2
Query: 1301 FLASNQLTGSIPDTLSTLTGLTDM 1372
FL++NQ TGSIP++L TL+ L DM
Sbjct: 126 FLSANQFTGSIPESLGTLSFLNDM 149 HSP 8 Score: 90.5077 bits (223), Expect = 1.053e-16 Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 1
Query: 5623 LCQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSHDR 5769
+ QLSGQLL AYGYGAPEF+SGIYT+QSDVYSFGVVMLELLTGR S+DR
Sbjct: 643 VSQLSGQLLAAYGYGAPEFDSGIYTWQSDVYSFGVVMLELLTGRMSYDR 691 HSP 9 Score: 72.7886 bits (177), Expect = 2.711e-11 Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 2
Query: 5312 RYLHEQCQPPVVHRNLKSANIXXXXXXSVRVSDCGLAPLIASGSVSQV 5455
YLHE C+PP++HRN KSAN+LLDDDLSV VSDCGLAPLI+SGSVSQ+
Sbjct: 599 EYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQL 646 HSP 10 Score: 71.633 bits (174), Expect = 7.024e-11 Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 3787 PARKSS---VPLPTFAKYFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGKV 3942
P +K+S +PL T K+++IASLQQYT SF+QENLIG GMLGSVYRA LP+GK+
Sbjct: 456 PVKKTSPKRLPL-TSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKL 509 HSP 11 Score: 67.781 bits (164), Expect = 1.486e-10 Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 3
Query: 663 SVAAINSLHAALGSPTLPGWVSSAGDPCGEAWQGVQCNGSSI 788
VAAIN L AALG+P LPGW++S GDPCGEAWQG+ CN S I
Sbjct: 35 DVAAINGLFAALGAPVLPGWIASGGDPCGEAWQGIICNVSDI 76 HSP 12 Score: 22.7126 bits (47), Expect = 1.486e-10 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query: 908 LNGANLGGELGD 943
+N ANL GELGD
Sbjct: 81 VNAANLQGELGD 92
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana OX=3702 GN=SUB PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.902e-27 Identity = 50/102 (49.02%), Postives = 60/102 (58.82%), Query Frame = 2
Query: 5852 RTRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQVLSSLNMNVLAQLSPISCN*LLALNLTMQPEPEFRPAMSEVVLYLLNMI 6157
RTRPRG Q L +WA+P+LHDI+AL+ MVDPSL+G YP KSLS FADIISR LQ+ EP FRP +SE+V L +MI
Sbjct: 696 RTRPRGHQTLAQWAIPRLHDIDALTRMVDPSLHGAYPMKSLSRFADIISRSLQM-----------------------------EPGFRPPISEIVQDLQHMI 768 HSP 2 Score: 57.3806 bits (137), Expect = 1.902e-27 Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 5659 GYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSHDR 5769
GY APE E G YT QSDV+S GVVMLELLTGR+ DR
Sbjct: 660 GYAAPEVEYGSYTCQSDVFSLGVVMLELLTGRRPFDR 696 HSP 3 Score: 93.5893 bits (231), Expect = 1.102e-17 Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 3
Query: 4812 LLAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWN 5042
LAVKKL Q DG+FL LV+N+ +++ +I++L+GYC+E GQRLL+YEYC NGSL DA+H D KL+WN
Sbjct: 521 FLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWN 597 HSP 4 Score: 61.6178 bits (148), Expect = 7.340e-8 Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 3757 TTFRRGTNVSPARKSSVPLPTFAKYFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPDGK 3939
T +R + P SS + A FTIASLQQYTN+FS+EN+IG G +G+VYRAEL GK
Sbjct: 464 TASKRAAHFPPGLNSS----SSATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGK 520
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.380e-25 Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 2
Query: 5858 RPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQVLSSLNMNVLAQLSPISCN*LLALNLTMQPEPEFRPAMSEVVLYLLNMIRRESQQ 6175
+PR E+ LVRWA PQLHDI+ALS++ DP+L+G YP KSLS FADII+ C+QV EPEFRP MSEVV L+ M++R S +
Sbjct: 606 KPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQV-----------------------------EPEFRPPMSEVVEALVRMVQRSSMK 682 HSP 2 Score: 48.1358 bits (113), Expect = 1.380e-25 Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 1
Query: 5659 GYGAPEF-ESGIYTYQSDVYSFGVVMLELLTGRQSHD 5766
GY APE + YT +SDVYSFGVVMLELLTGR D
Sbjct: 567 GYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFD 603 HSP 3 Score: 83.1889 bits (204), Expect = 1.867e-14 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 3
Query: 4815 LAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
LAVKK+D D K +V ++ +IRH NI +L+GYCSE G +L+YEY NGSLH+ +H D F L+WNT
Sbjct: 429 LAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNT 505
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.780e-25 Identity = 46/92 (50.00%), Postives = 52/92 (56.52%), Query Frame = 2
Query: 5855 TRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQVLSSLNMNVLAQLSPISCN*LLALNLTMQPEPEFRPAMSE 6130
TR R EQ LVRWA PQLHDI+AL+ MVDP+L G YP KSLS FAD+I+ C+Q PEPEFRP MSE
Sbjct: 620 TRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQ-----------------------------PEPEFRPPMSE 682 HSP 2 Score: 51.9878 bits (123), Expect = 1.780e-25 Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 5650 TAYGYGAPEFE-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5766
T GY APE SG Y+ +SD+YSFGVVMLELLTGR+ D
Sbjct: 579 TDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFD 618 HSP 3 Score: 83.1889 bits (204), Expect = 1.825e-14 Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3
Query: 4812 LLAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
+LAVKK+D H DF+E+V+ I + H N+ KL+GYC+EHGQ L++YE+ +NGSLHD +H + L WN+
Sbjct: 440 VLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNS 517
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.754e-25 Identity = 46/92 (50.00%), Postives = 51/92 (55.43%), Query Frame = 2
Query: 5855 TRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQVLSSLNMNVLAQLSPISCN*LLALNLTMQPEPEFRPAMSE 6130
TR R EQ LVRWA PQLHDI+AL MVDP+L G YP KSLS FAD+I+ C+Q PEPEFRP MSE
Sbjct: 623 TRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQ-----------------------------PEPEFRPPMSE 685 HSP 2 Score: 51.6026 bits (122), Expect = 2.754e-25 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 5659 GYGAPEFE-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5766
GY APE SG Y+ +SDVYSFGVVMLELLTGR+ D
Sbjct: 585 GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFD 621 HSP 3 Score: 75.485 bits (184), Expect = 4.356e-12 Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 3
Query: 4812 LLAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
+LAVKK+D DF E+V+ I + H N+ KL GYCSEHGQ L++YE+ NGSLHD +H + L WN
Sbjct: 443 VLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNP 520
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana OX=3702 GN=SRF4 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 2.661e-18 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 2
Query: 5858 RPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQV 6013
RP+ EQ LVRWA PQL D++ L MVDP+L G Y +S+S+FADI+S C+
Sbjct: 617 RPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICVMT 668 HSP 2 Score: 51.6026 bits (122), Expect = 2.661e-18 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 5659 GYGAPEF-ESGIYTYQSDVYSFGVVMLELLTGRQSHD 5766
GY APE + YT +SDVYSFGVVMLELLTGR+ +D
Sbjct: 578 GYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYD 614 HSP 3 Score: 60.4622 bits (145), Expect = 1.565e-7 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 3
Query: 4815 LAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
AVK++D +F +V++I I H N+ +L+GYCSE G+ +L+YEY +GSLH +H D F L+WNT
Sbjct: 440 FAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNT 516
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: PBL26_ARATH (Probable serine/threonine-protein kinase PBL26 OS=Arabidopsis thaliana OX=3702 GN=PBL26 PE=2 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 3.633e-13 Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 5632 LSGQLLTAYGYGAPEFE-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5766
+S +++ YGY APE++ +G T +SDVYSFGVV+LEL+TGR+ D
Sbjct: 239 VSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRVID 284 HSP 2 Score: 47.7506 bits (112), Expect = 3.633e-13 Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 2
Query: 5837 RNLLFRTRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQ 6010
R ++ TRP+ EQ LV WA P + + DPSL G +P K+L+ + + CLQ
Sbjct: 280 RRVIDTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQ 337
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Match: PBL6_ARATH (Probable serine/threonine-protein kinase PBL6 OS=Arabidopsis thaliana OX=3702 GN=PBL6 PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 3.660e-13 Identity = 24/46 (52.17%), Postives = 38/46 (82.61%), Query Frame = 1
Query: 5632 LSGQLLTAYGYGAPEFE-SGIYTYQSDVYSFGVVMLELLTGRQSHD 5766
+S +++ YGY AP++ +G T++SDVYSFGVV+LEL+TGR+++D
Sbjct: 258 VSTRVMGTYGYCAPDYALTGQLTFKSDVYSFGVVLLELITGRKAYD 303 HSP 2 Score: 45.8246 bits (107), Expect = 3.660e-13 Identity = 23/58 (39.66%), Postives = 27/58 (46.55%), Query Frame = 2
Query: 5837 RNLLFRTRPRGEQFLVRWAVPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQ 6010
R TR R Q LV WA P D + MVDP L G YP + L I + C+Q
Sbjct: 299 RKAYDNTRTRNHQSLVEWANPLFKDRKNFKKMVDPLLEGDYPVRGLYQALAIAAMCVQ 356 HSP 3 Score: 58.9214 bits (141), Expect = 3.036e-7 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 3
Query: 4812 LLAVKKLDKRTTDHQKDGDFLELVNNIDRIRHVNIVKLMGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNT 5045
++A+K+LD+ Q +F+ V + H N+VKL+G+C+E QRLL+YEY GSL + +H + K L+WNT
Sbjct: 123 VVAIKQLDRNGA--QGIREFVVEVLTLSLADHPNLVKLIGFCAEGVQRLLVYEYMPLGSLDNHLHDLPSGKNPLAWNT 198 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06535 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_06535_La_Tanjil_v1.0 ID=rna-TanjilR_06535_La_Tanjil_v1.0; Name=rna-TanjilR_06535; organism=Lupinus angustifolius; type=mRNA; length=6184bpback to top protein sequence of rna-TanjilR_06535_La_Tanjil_v1.0 >rna-TanjilR_06535_La_Tanjil_v1.0 ID=rna-TanjilR_06535_La_Tanjil_v1.0; Name=rna-TanjilR_06535_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=788bpback to top mRNA from alignment at Chr_LG13-CM007373.1:3576806..3582989+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_06535_La_Tanjil_v1.0 ID=rna-TanjilR_06535_La_Tanjil_v1.0; Name=rna-TanjilR_06535; organism=Lupinus angustifolius; type=mRNA; length=6184bp; location=Sequence derived from: Chr_LG13-CM007373.1:3576806..3582989+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3576806..3582989+ >rna-TanjilR_06535_La_Tanjil_v1.0 ID=rna-TanjilR_06535_La_Tanjil_v1.0; Name=rna-TanjilR_06535; organism=Lupinus angustifolius; type=CDS; length=2367bp; location=Sequence derived from: Chr_LG13-CM007373.1:3576806..3582989+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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