Homology
BLAST of rna-TanjilR_06520 vs. DB:Swiss
Match:
POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 86.6557 bits (213), Expect = 2.412e-15
Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -2
Query: 5316 LKHVLKTCNIPLMNKS-KVVFCDACALGKSHRLPSQPSLTVYSTPFDLVYVDLWGPTPIVFVSGYRYYMSIVDSCTRYTWLFLLKQKSEAITFFKQFHTMIQVQFKGVLKFVQTYWGGEF 5672
L V+ ++P++N S K++ C C + KSH++P S S P + +Y D+W +PI+ + YRYY+ VD TRYTWL+ LKQKS+ F F ++++ +F+ + + + GGEF
Sbjct: 458 LNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF 576 HSP 2 Score: 86.6557 bits (213), Expect = 2.412e-15
Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -2
Query: 3735 LKHVLKTCNIPLMNKS-KVVFCDACALGKSHRLPSQPSLTVYSTPFDLVYVDLWGPTPIVFVSGYRYYMSIVDSCTRYTWLFLLKQKSEAITFFKQFHTMIQVQFKGVLKFVQTYWGGEF 4091
L V+ ++P++N S K++ C C + KSH++P S S P + +Y D+W +PI+ + YRYY+ VD TRYTWL+ LKQKS+ F F ++++ +F+ + + + GGEF
Sbjct: 458 LNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF 576
BLAST of rna-TanjilR_06520 vs. DB:Swiss
Match:
POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 75.485 bits (184), Expect = 5.296e-12
Identity = 33/99 (33.33%), Postives = 56/99 (56.57%), Query Frame = -2
Query: 5316 CDACALGKSHRLPSQPSLTVYSTPFDLVYVDLWGPTPIVFVSGYRYYMSIVDSCTRYTWLFLLKQKSEAITFFKQFHTMIQVQFKGVLKFVQTYWGGEF 5612
CD C GK HR+ Q S DLVY D+ GP I + G +Y+++ +D +R W+++LK K + F++FH +++ + LK +++ GGE+
Sbjct: 457 CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEY 555 HSP 2 Score: 75.485 bits (184), Expect = 5.296e-12
Identity = 33/99 (33.33%), Postives = 56/99 (56.57%), Query Frame = -2
Query: 3735 CDACALGKSHRLPSQPSLTVYSTPFDLVYVDLWGPTPIVFVSGYRYYMSIVDSCTRYTWLFLLKQKSEAITFFKQFHTMIQVQFKGVLKFVQTYWGGEF 4031
CD C GK HR+ Q S DLVY D+ GP I + G +Y+++ +D +R W+++LK K + F++FH +++ + LK +++ GGE+
Sbjct: 457 CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEY 555
BLAST of rna-TanjilR_06520 vs. DB:Swiss
Match:
POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 75.485 bits (184), Expect = 6.733e-12
Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = -2
Query: 5316 LKHVLKTCNIPLMNKS-KVVFCDACALGKSHRLPSQPSLTVYSTPFDLVYVDLWGPTPIVFVSGYRYYMSIVDSCTRYTWLFLLKQKSEAITFFKQFHTMIQVQFKGVLKFVQTYWGGEF 5672
L V+ ++ ++N S K + C C + KS+++P S + P + +Y D+W +PI+ YRYY+ VD TRYTWL+ LKQKS+ F F +++ +F+ + + GGEF
Sbjct: 479 LNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEF 597 HSP 2 Score: 75.485 bits (184), Expect = 6.733e-12
Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = -2
Query: 3735 LKHVLKTCNIPLMNKS-KVVFCDACALGKSHRLPSQPSLTVYSTPFDLVYVDLWGPTPIVFVSGYRYYMSIVDSCTRYTWLFLLKQKSEAITFFKQFHTMIQVQFKGVLKFVQTYWGGEF 4091
L V+ ++ ++N S K + C C + KS+++P S + P + +Y D+W +PI+ YRYY+ VD TRYTWL+ LKQKS+ F F +++ +F+ + + GGEF
Sbjct: 479 LNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEF 597
BLAST of rna-TanjilR_06520 vs. DB:Swiss
Match:
PEX22_ARATH (Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana OX=3702 GN=PEX22 PE=1 SV=1)
HSP 1 Score: 66.6254 bits (161), Expect = 4.671e-10
Identity = 27/35 (77.14%), Postives = 33/35 (94.29%), Query Frame = 3
Query: 6051 QVLFCSTENGRSSFVRQLEPDWHIDSNPDVISQLA 6155
+VLFCSTE GR+SFVRQLEPDWHID+NP++ +QLA
Sbjct: 215 KVLFCSTEIGRTSFVRQLEPDWHIDTNPEISTQLA 249 HSP 2 Score: 65.4698 bits (158), Expect = 1.029e-9
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 3
Query: 2466 QKGATVRSSVLEVLLEITKFCDLYLMERVLDDESEVRNL 2582
QK ATVRSSVLEVLLEITK+ DLYLMERVLDDESE + L
Sbjct: 159 QKQATVRSSVLEVLLEITKYSDLYLMERVLDDESEAKVL 197 HSP 3 Score: 59.3066 bits (142), Expect = 1.873e-9
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 667 DTQSIGAVAGLAVAIFFSWRLLRSPGGAXXXXXXXXSTTSASP------GVSAQSNVSVAPSGVCSPSDDSRAQNVVDEFFQP 897
D++SIGA+AGLA+A+ F+WR +R+PG ++R++ ++ +A + SVAP V SP +D+ Q+VVD+FFQP
Sbjct: 41 DSRSIGAIAGLAIAVIFTWRAIRTPGEQRQRRQPKRRIHNAETSSAAAAASQSNLASSVAPE-VSSPREDNAVQDVVDQFFQP 122 HSP 4 Score: 27.7202 bits (60), Expect = 1.873e-9
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query: 1001 GQVVRQRLNEGRKV 1042
GQ+VRQ+L+EGRKV
Sbjct: 128 GQIVRQKLSEGRKV 141
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06520 vs. DB:Swiss
Analysis Date: 2020-01-28 (
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot )
Total hits: 4
500 1000 1500 2000 2500 3000 3500 4000 4500 5000 5500 6000 Expect = 2.41e-15 / Id = 36.67 Expect = 2.41e-15 / Id = 36.67 Expect = 5.30e-12 / Id = 33.33 Expect = 5.30e-12 / Id = 33.33 Expect = 6.73e-12 / Id = 34.17 Expect = 6.73e-12 / Id = 34.17 Expect = 1.87e-9 / Id = 77.14 Expect = 1.87e-9 / Id = 77.14 Expect = 1.03e-9 / Id = 77.14 Expect = 4.67e-10 / Id = 77.14 Sequence POLR2_ARATH POLX_TOBAC POLR1_ARATH PEX22_ARATH
Match Name E-value Identity Description
POLR2_ARATH 2.412e-15 36.67 Retrovirus-related Pol polyprotein from transposon... [more]
POLX_TOBAC 5.296e-12 33.33 Retrovirus-related Pol polyprotein from transposon... [more]
POLR1_ARATH 6.733e-12 34.17 Retrovirus-related Pol polyprotein from transposon... [more]
PEX22_ARATH 4.671e-10 77.14 Peroxisome biogenesis protein 22 OS=Arabidopsis th... [more]
back to top
Sequences
The
following sequences are available for this feature:
mRNA sequence
>rna-TanjilR_06520_La_Tanjil_v1.0 ID=rna-TanjilR_06520_La_Tanjil_v1.0; Name=rna-TanjilR_06520; organism=Lupinus angustifolius; type=mRNA; length=6411bp ATGGCGGATTCCTTCAAAGAAGAACTTTCCCAGCTCATCAAACGCCTCAC TCTCAAGATTTCCAATCTCTTCATTTCCCTTCGCAACCTCGTTCGTACTC TCTtcctttcattctttctctttatCTTATTCATAACCCACTTACATTTT TTTCGTTTTTCTCAATTACCCTTCAAAAAGTTTGTTCTTTTGCCCTGATT TTCATACCCCAATGTGATTATTGTTTGAATTTTAGTTGATTGGGAATTTG GGGTAGTAATTCTCAATTCAAACCCTGAATTAATTCATTGTGGGTTTATT TCTTTGTCTGTgataaaatacaataaaaaaactcaacCTAAAGTTTAGGG GGAAATATAGAAGAACTATGCTACAGTTTAtggtttatatttttcttctc aaatttTGTTCTCTAAATGAAAAATAGGACTTTTGTATTGCTATTCCTTC TAACTTGTATATTTCCTAGAAGTTGTATTTCATAGGTGTTAAGAGCTTAG AAGCAATAGGAGTGTTGAGCTTCTTTTATGTGTTTTTCTGAGAGCATAGT TTTTAACTGGACCATATGTCTTGATCATTGTCTAACATTGTGTAATATGA CGCAAATACTGCCATCTTTCGATAGTCAAACTTCTCTGGTCCTCATTATG CTCAACTTGATGATAGGATACACAATCTATTGGGGCGGTTGCGGGTCTTG CTGTTGCGATTTTTTTCTCCTGGAGGCTGTTGAGATCACCTGGTGGAGCT CAACGCAGGCAACGAAAACGGCAATCTACTACTTCCGCTAGTCCTGGAGT CAGTGCACAGTCAAATGTTTCAGTAGCTCCTTCTGGTGTTTGTTCACCAT CGGATGATTCAAGGGCGCAAAATGTCGTTGATGAGTTCTTTCAGCCAGTC AAGGTAAATGTCCTTGTTTTGGTCATATTTTGATTGCTTTATGTATGACG TATTGACAATTCTTACCTTACTTCTTCCACTTATTTTACAGCCAACATTG GGCCAGGTTGTCAGGCAGAGGTTGAATGAAGGAAGAAAGGTAATTAAATA TATCCTCTAACTTCAGAAATACAGAGCAATGTCCCGGTTTTTCTTTGTCA TACTCGTTGCTATTGAGGACTATTTATCTTTACTTTTGCTTGTTCCCTGC CTTCTATGTTGTTAGAAATAGTCATAGATTCGGGAAAGTGGAGGTGAGGG GAGACAAGGAAGTAGGCAGGCCAGACCTAATTAGTTATAAGTAGCGGAAC ATGACTGAATTGTATAGGACAGTAAGCATAACTGAATCAGTTAGAGGTGA TGTTAGCTGTGTGGTTAGGAAAGTGATATAAATAGGGGAAAGGAGAGGGA GACATTCAGTTGGTTGgtttgttggaacttggtaggGAGAGTCTCAGGCT CGAAATACTGAGGTGTACATTGCATTCTTGTTCATTCCTAAACTAAGAGC TATATTTCAATACTGAAACTCactattcttcatatttttctctttgtaCT AACCAGTTTCTATCGCATGTCCAGtaatttttcttatcttttatccaaaa agaAGGGCATAAGTTGGTATTCTGTCTTGTTTAAGTGTTGTTATACCCTT GAAGGTTTGCTTAAGGATTATCTAACATACAGGCATTAGATGAAGCCTCT AAACTAAAGTGATGGTTGTCTGGTAAAACTTTTTCCATCTATCTTTGGCC AATTATCGTAATTGCCAATTGTCTTTTTGTGATGTCCAATTTATATGAGA AATCTAATTAAAGTCTAATGATAGAAATAACACACGGGAAATGGCTTAGT GAACATACTTTATGAAAAACCTTAGGAAGAAAAGAAATCAGAATGGTATT TACCATAGTAATACTCCCCCTGTCCCGTCCCATAAGGATAGTAAAACTTT GAAAAGTCAAAAGAAATAAGAAAGCATGCTTTTGATGTTTTGTCTAACAG ATTAGCCAATCATCGTACCGCTAATTTTATGCGTCTTTCATTGATTATTC AATCATAAACCAACCGTAGTATGCAATTTCCAAGTTTTTTACTCTCTTTA TGGGACGAAGGGAGTACATTGCAAGGTATTTTCCAATATTTACTTGATTT CCAACTTATGGTATACCTCAATTAGATACTATTATTCCTTTTACGTGGTA AATCTGAATAAGTCATGTTGCCTACCTGTCTCTGTGAAACATGGGTACTT GATTACATATTTGCATGAGGAACATCTATTTTACAAGTTTGAGTGGTTAG TTGTTATGCATTTGTATGGTCAATATTTCTTGCCTCGTATTGCTGAATTT ATGCTATGCTTTGTGCCTTACATAGGTGACTTGTCGTCTTCTTGGAGTGA TCCTTGAGGAAAGTAGTCCGGAGGAGCTTCAGGTGGTGAGATAGtccatt ttttgtatttttgttgaaGACATTAATATGAACAAAGATATCACTGAGGT TCATTCTGTTCTTGGCAGAAAGGAGCAACTGTGAGGTCCTCTGTGCTGGA AGTATTGTTGgaaataacaaaattttgtGATTTATATCTCATGGAACGAG TTCTGGATGATGAAAGTGAGGTGCGCAATTTGTCTAAATATATCATGTAT CAATGATGTGTTAACTTTTATTTGATGAGCTTGATGGAATTGACGAAGAA CACTTCACATTAACACAGCTTATTGCCACCATCTCCTGACTTAgttgatg aaaatatatttttataaccaatGGTTCTGTTTAAACTTAAATGAACTAAG ATCTTGTATTGCTGCTTGAGGCGAAAACTCTTACTCTACAATTTGATGCA TGTGAAACTGTTATGGTCACCCTTGTTGATGTCACATTAGGTATATGAAT CATCAATATACTTTTATTATCTCTTCTCTTTGACGTTGGCCAGCTTATCC ATCCCACCATGCAGCATAGATGACTAGATTATTTCTGTCTTGAAATTACT AATCTGACCTTGTTTGAGATTGTACATTTTGTACTGCTGTTGTGCTAACT AAAATTGCTTGCCAGCCTCTTGttgattgttattgttatgTTTTGGCCTT CTATATTATTATTCCTGCAGAAAAGAGTTCTTGTAGCATTAGAAGATGCT GGGGTATTCACTTCAGGTGGTTTGGTTAAGGACAAGGTATGCCCTTGATT ACACACCTCTTATTCTTTATAGAACTTAACTGTCTCCTTACTGTAGTGTT GCTGGGCATTTTGAGCTTTTAACTTCTACATGTATGCATAAATACAATAG TCTTTTTGTGCTTTATGAGGACATTGTTGTATGTGCAGGATACATATGAT GGGCAGCATAAGAAtatctatttaattatagtcataaaTGTATTAACACT AGTTCCGACAATGAAAACTGATTGAAATTTGTATTTACCCTTTTTATATG GAGGCATTTTGATAGAAGATGGCCCAAAGGATGTTTATGCTAATTTCAAG AGTAcctagagagagagagagagagagagacttCGTATATTGTTCTTTAC CAGAAGAATTTAATACATTTTAGGAAGCCTCAAAACAAATTTGTTGTACA ATATTGTCTAGAAAACAAATGGCCTGTCATAATTGACTAGGGGTTCTAGT TTTCCTTAAAGGAAAAAAGTGTTAGTGATATTCTGCTGCTTGTTGTTTAG TTGTGTGTTAGAAAAGCTTAATTCAAGCTTAGAGAAGAAACAGAGAaatc agagagagagagagaagagagaagtaAAAGGTCTAAATTCCCCTCCCCAA TACGTTTGGACAAATTTAAGAACACCTTTAAACTGAACCTGGATCATAGT GTGAAATTGCTTAAAGAAAGTGATAGCCTCAGACTTTTGTTTCAACAAAA ATAGCCAAGTGTATCTAGTACAGGAATCAACAATAGACATGTAATATCTA TAACCTGAAACAAATACAATAGGAGTAGGACCCCACAGATCaacatacac caaatcaaagGGCGTTGAGTAAACAGTAAGAGAAGGTTGTGAAGGCAAAc gatgagatttacctaaagcACAAGCATCACAAAACACAACTTTGCTTTTA TTCATAAGAGGAATATTACATGTCTTCAAAACATGTTTCAGTGTCTAAGA AATCCTTGAAACCTGAAATTATGAAGTATTTGGTCTCATTGGTTGAGTTG TGACCGCAATTTGTCTAAATATATCATGTATCAATGATGTGTTAACTTTT ATTTGATGAGCTTGATGGAATTGACGAAGAACACTTCACATTAACACAGC TTATTGCCACCATCTCCTGACTTAgttgatgaaaatatatttttataacc aatGGTTCTGTTTAAACTTAAATGAACTAAGATCTTGTATTGCTGCTTGA GGCGAAAACTCTTACTCTACAATTTGATGCATGTGAAACTGTTATGGTCA CCCTTGTTGATGTCACATTAGGTATATGAATCATCAATATACTTTTATTA TCTCTTCTCTTTGACGTTGGCCAGCTTATCCATCCCACCATGCAGCATAG ATGACTAGATTATTTCTGTCTTGAAATTACTAATCTGACCTTGTTTGAGA TTGTACATTTTGTACTGCTGTTGTGCTAACTAAAATTGCTTGCCAGCCTC TTGttgattgttattgttatgTTTTGGCCTTCTATATTATTATTCCTGCA GAAAAGAGTTCTTGTAGCATTAGAAGATGCTGGGGTATTCACTTCAGGTG GTTTGGTTAAGGACAAGGTATGCCCTTGATTACACACCTCTTATTCTTTA TAGAACTTAACTGTCTCCTTACTGTAGTGTTGCTGGGCATTTTGAGCTTT TAACTTCTACATGTATGCATAAATACAATAGTCTTTTTGTGCTTTATGAG GACATTGTTGTATGTGCAGGATACATATGATGGGCAGCATAAGAAtatct atttaattatagtcataaaTGTATTAACACTAGTTCCGACAATGAAAACT GATTGAAATTTGTATTTACCCTTTTTATATGGAGGCATTTTGATAGAAGA TGGCCCAAAGGATGTTTATGCTAATTTCAAGAGTAcctagagagagagag agagagagagacttCGTATATTGTTCTTTACCAGAAGAATTTAATACATT TTAGGAAGCCTCAAAACAAATTTGTTGTACAATATTGTCTAGAAAACAAA TGGCCTGTCATAATTGACTAGGGGTTCTAGTTTTCCTTAAAGGAAAAAAG TGTTAGTGATATTCTGCTGCTTGTTGTTTAGTTGTGTGTTAGAAAAGCTT AATTCAAGCTTAGAGAAGAAACAGAGAaatcagagagagagagagaagag agaagtaAAAGGTCTAAATTCCCCTCCCCAATACGTTTGGACAAATTTAA GAACACCTTTAAACTGAACCTGGATCATAGTGTGAAATTGCTTAAAGAAA GTGATAGCCTCAGACTTTTGTTTCAACAAAAATAGCCAAGTGTATCTAGT ACAGGAATCAACAATAGACATGTAATATCTATAACCTGAAACAAATACAA TAGGAGTAGGACCCCACAGATCaacatacaccaaatcaaagGGCGTTGAG TAAACAGTAAGAGAAGGTTGTGAAGGCAAAcgatgagatttacctaaagc ACAAGCATCACAAAACACAACTTTGCTTTTATTCATAAGAGGAATATTAC ATGTCTTCAAAACATGTTTCAGTGTCTAAGAAATCCTTGAAACCTGAAAT TATGAAGTATTTGGTCTCATTGGTTGAGTTGTGACTTTATCCTCATCTTG CACGCCAAAATTTTTATTTAGGTAAACTATAAATATATCATCAATAACTG ACCATGATTGGCACATAAGGCCTAAACTAAGCCTAGAGATTCACTGGAAC ACCTATTAGGAAGGGTTCCCAAAAAAACTTAGTTTCCCCTAAACCACTAA AGGATTCTGATTTGTTCCTCACATATCTTCCTTCTCTGGCATTGAATGTT GCAAATAACCACATGTTTGATCAAATGCTTGCTGCCTACTTTTtccttct tattcttcttaatAACTATTTTTCATCCACCTTTTTCTGTTATGTATATG CAGGTCCTTTTCTGTAGCACGGAGAATGGAAGGTCATCATTTGTTCGGCA ATTGGAACCAGATTGGCATATCGACTCAAATCCTGACGTTATCTCTCAGC TAGCTGTATGTTTTACTACATAATAATCTCATACTTTATTACACAGTTAT CCTGGAAGTTCATGCTTTGATATGATAGCCATATTGCTATTTGTTTTTAG GATATAATATTATCCTTATTTATATCATCTAATGATCAACACTTATCATG ATGCAGAGATTTATAAAGTATCAACTTCATGTCTCTCCACTTAGAACCGA AAAAACGGCTGCTAATGTTCTCAGTGCGCCATCCCTGGAACAGTTCTTTG GATCCATGTAA back to top protein sequence of rna-TanjilR_06520_La_Tanjil_v1.0
>rna-TanjilR_06520_La_Tanjil_v1.0 ID=rna-TanjilR_06520_La_Tanjil_v1.0; Name=rna-TanjilR_06520_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=291bp MADSFKEELSQLIKRLTLKISNLFISLRNLDTQSIGAVAGLAVAIFFSWR LLRSPGGAQRRQRKRQSTTSASPGVSAQSNVSVAPSGVCSPSDDSRAQNV VDEFFQPVKPTLGQVVRQRLNEGRKVTCRLLGVILEESSPEELQVKGATV RSSVLEVLLEITKFCDLYLMERVLDDESEKRVLVALEDAGVFTSGGLVKD KKRVLVALEDAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDWHIDSNP DVISQLARFIKYQLHVSPLRTEKTAANVLSAPSLEQFFGSM back to top mRNA from alignment at Chr_LG13-CM007373.1:3694722..3701132+
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_06520_La_Tanjil_v1.0 ID=rna-TanjilR_06520_La_Tanjil_v1.0; Name=rna-TanjilR_06520; organism=Lupinus angustifolius; type=mRNA; length=6411bp; location=Sequence derived from: Chr_LG13-CM007373.1:3694722..3701132+ (Lupinus angustifoliusATGGCGGATTCCTTCAAAGAAGAACTTTCCCAGCTCATCAAACGCCTCAC
TCTCAAGATTTCCAATCTCTTCATTTCCCTTCGCAACCTC GTTCGTACTC
TCTtcctttcattctttctctttatCTTATTCATAACCCACTTACATTTT
TTTCGTTTTTCTCAATTACCCTTCAAAAAGTTTGTTCTTTTGCCCTGATT
TTCATACCCCAATGTGATTATTGTTTGAATTTTAGTTGATTGGGAATTTG
GGGTAGTAATTCTCAATTCAAACCCTGAATTAATTCATTGTGGGTTTATT
TCTTTGTCTGTgataaaatacaataaaaaaactcaacCTAAAGTTTAGGG
GGAAATATAGAAGAACTATGCTACAGTTTAtggtttatatttttcttctc
aaatttTGTTCTCTAAATGAAAAATAGGACTTTTGTATTGCTATTCCTTC
TAACTTGTATATTTCCTAGAAGTTGTATTTCATAGGTGTTAAGAGCTTAG
AAGCAATAGGAGTGTTGAGCTTCTTTTATGTGTTTTTCTGAGAGCATAGT
TTTTAACTGGACCATATGTCTTGATCATTGTCTAACATTGTGTAATATGA
CGCAAATACTGCCATCTTTCGATAGTCAAACTTCTCTGGTCCTCATTATG
CTCAACTTGATGATAGGATACACAATCTATTGGGGCGGTTGCGGGTCTTG
CTGTTGCGATTTTTTTCTCCTGGAGGCTGTTGAGATCACCTGGTGGAGCT
CAACGCAGGCAACGAAAACGGCAATCTACTACTTCCGCTAGTCCTGGAGT
CAGTGCACAGTCAAATGTTTCAGTAGCTCCTTCTGGTGTTTGTTCACCAT
CGGATGATTCAAGGGCGCAAAATGTCGTTGATGAGTTCTTTCAGCCAGTC
AAG GTAAATGTCCTTGTTTTGGTCATATTTTGATTGCTTTATGTATGACG
TATTGACAATTCTTACCTTACTTCTTCCACTTATTTTACAGCCAACATTG
GGCCAGGTTGTCAGGCAGAGGTTGAATGAAGGAAGAAAG GTAATTAAATA
TATCCTCTAACTTCAGAAATACAGAGCAATGTCCCGGTTTTTCTTTGTCA
TACTCGTTGCTATTGAGGACTATTTATCTTTACTTTTGCTTGTTCCCTGC
CTTCTATGTTGTTAGAAATAGTCATAGATTCGGGAAAGTGGAGGTGAGGG
GAGACAAGGAAGTAGGCAGGCCAGACCTAATTAGTTATAAGTAGCGGAAC
ATGACTGAATTGTATAGGACAGTAAGCATAACTGAATCAGTTAGAGGTGA
TGTTAGCTGTGTGGTTAGGAAAGTGATATAAATAGGGGAAAGGAGAGGGA
GACATTCAGTTGGTTGgtttgttggaacttggtaggGAGAGTCTCAGGCT
CGAAATACTGAGGTGTACATTGCATTCTTGTTCATTCCTAAACTAAGAGC
TATATTTCAATACTGAAACTCactattcttcatatttttctctttgtaCT
AACCAGTTTCTATCGCATGTCCAGtaatttttcttatcttttatccaaaa
agaAGGGCATAAGTTGGTATTCTGTCTTGTTTAAGTGTTGTTATACCCTT
GAAGGTTTGCTTAAGGATTATCTAACATACAGGCATTAGATGAAGCCTCT
AAACTAAAGTGATGGTTGTCTGGTAAAACTTTTTCCATCTATCTTTGGCC
AATTATCGTAATTGCCAATTGTCTTTTTGTGATGTCCAATTTATATGAGA
AATCTAATTAAAGTCTAATGATAGAAATAACACACGGGAAATGGCTTAGT
GAACATACTTTATGAAAAACCTTAGGAAGAAAAGAAATCAGAATGGTATT
TACCATAGTAATACTCCCCCTGTCCCGTCCCATAAGGATAGTAAAACTTT
GAAAAGTCAAAAGAAATAAGAAAGCATGCTTTTGATGTTTTGTCTAACAG
ATTAGCCAATCATCGTACCGCTAATTTTATGCGTCTTTCATTGATTATTC
AATCATAAACCAACCGTAGTATGCAATTTCCAAGTTTTTTACTCTCTTTA
TGGGACGAAGGGAGTACATTGCAAGGTATTTTCCAATATTTACTTGATTT
CCAACTTATGGTATACCTCAATTAGATACTATTATTCCTTTTACGTGGTA
AATCTGAATAAGTCATGTTGCCTACCTGTCTCTGTGAAACATGGGTACTT
GATTACATATTTGCATGAGGAACATCTATTTTACAAGTTTGAGTGGTTAG
TTGTTATGCATTTGTATGGTCAATATTTCTTGCCTCGTATTGCTGAATTT
ATGCTATGCTTTGTGCCTTACATAGGTGACTTGTCGTCTTCTTGGAGTGA
TCCTTGAGGAAAGTAGTCCGGAGGAGCTTCAGGTG GTGAGATAGtccatt
ttttgtatttttgttgaaGACATTAATATGAACAAAGATATCACTGAGGT
TCATTCTGTTCTTGGCAGAAAGGAGCAACTGTGAGGTCCTCTGTGCTGGA
AGTATTGTTGgaaataacaaaattttgtGATTTATATCTCATGGAACGAG
TTCTGGATGATGAAAGTGAG GTGCGCAATTTGTCTAAATATATCATGTAT
CAATGATGTGTTAACTTTTATTTGATGAGCTTGATGGAATTGACGAAGAA
CACTTCACATTAACACAGCTTATTGCCACCATCTCCTGACTTAgttgatg
aaaatatatttttataaccaatGGTTCTGTTTAAACTTAAATGAACTAAG
ATCTTGTATTGCTGCTTGAGGCGAAAACTCTTACTCTACAATTTGATGCA
TGTGAAACTGTTATGGTCACCCTTGTTGATGTCACATTAGGTATATGAAT
CATCAATATACTTTTATTATCTCTTCTCTTTGACGTTGGCCAGCTTATCC
ATCCCACCATGCAGCATAGATGACTAGATTATTTCTGTCTTGAAATTACT
AATCTGACCTTGTTTGAGATTGTACATTTTGTACTGCTGTTGTGCTAACT
AAAATTGCTTGCCAGCCTCTTGttgattgttattgttatgTTTTGGCCTT
CTATATTATTATTCCTGCAGAAAAGAGTTCTTGTAGCATTAGAAGATGCT
GGGGTATTCACTTCAGGTGGTTTGGTTAAGGACAAG GTATGCCCTTGATT
ACACACCTCTTATTCTTTATAGAACTTAACTGTCTCCTTACTGTAGTGTT
GCTGGGCATTTTGAGCTTTTAACTTCTACATGTATGCATAAATACAATAG
TCTTTTTGTGCTTTATGAGGACATTGTTGTATGTGCAGGATACATATGAT
GGGCAGCATAAGAAtatctatttaattatagtcataaaTGTATTAACACT
AGTTCCGACAATGAAAACTGATTGAAATTTGTATTTACCCTTTTTATATG
GAGGCATTTTGATAGAAGATGGCCCAAAGGATGTTTATGCTAATTTCAAG
AGTAcctagagagagagagagagagagagacttCGTATATTGTTCTTTAC
CAGAAGAATTTAATACATTTTAGGAAGCCTCAAAACAAATTTGTTGTACA
ATATTGTCTAGAAAACAAATGGCCTGTCATAATTGACTAGGGGTTCTAGT
TTTCCTTAAAGGAAAAAAGTGTTAGTGATATTCTGCTGCTTGTTGTTTAG
TTGTGTGTTAGAAAAGCTTAATTCAAGCTTAGAGAAGAAACAGAGAaatc
agagagagagagagaagagagaagtaAAAGGTCTAAATTCCCCTCCCCAA
TACGTTTGGACAAATTTAAGAACACCTTTAAACTGAACCTGGATCATAGT
GTGAAATTGCTTAAAGAAAGTGATAGCCTCAGACTTTTGTTTCAACAAAA
ATAGCCAAGTGTATCTAGTACAGGAATCAACAATAGACATGTAATATCTA
TAACCTGAAACAAATACAATAGGAGTAGGACCCCACAGATCaacatacac
caaatcaaagGGCGTTGAGTAAACAGTAAGAGAAGGTTGTGAAGGCAAAc
gatgagatttacctaaagcACAAGCATCACAAAACACAACTTTGCTTTTA
TTCATAAGAGGAATATTACATGTCTTCAAAACATGTTTCAGTGTCTAAGA
AATCCTTGAAACCTGAAATTATGAAGTATTTGGTCTCATTGGTTGAGTTG
TGACCGCAATTTGTCTAAATATATCATGTATCAATGATGTGTTAACTTTT
ATTTGATGAGCTTGATGGAATTGACGAAGAACACTTCACATTAACACAGC
TTATTGCCACCATCTCCTGACTTAgttgatgaaaatatatttttataacc
aatGGTTCTGTTTAAACTTAAATGAACTAAGATCTTGTATTGCTGCTTGA
GGCGAAAACTCTTACTCTACAATTTGATGCATGTGAAACTGTTATGGTCA
CCCTTGTTGATGTCACATTAGGTATATGAATCATCAATATACTTTTATTA
TCTCTTCTCTTTGACGTTGGCCAGCTTATCCATCCCACCATGCAGCATAG
ATGACTAGATTATTTCTGTCTTGAAATTACTAATCTGACCTTGTTTGAGA
TTGTACATTTTGTACTGCTGTTGTGCTAACTAAAATTGCTTGCCAGCCTC
TTGttgattgttattgttatgTTTTGGCCTTCTATATTATTATTCCTGCA
GAAAAGAGTTCTTGTAGCATTAGAAGATGCTGGGGTATTCACTTCAGGTG
GTTTGGTTAAGGACAAG GTATGCCCTTGATTACACACCTCTTATTCTTTA
TAGAACTTAACTGTCTCCTTACTGTAGTGTTGCTGGGCATTTTGAGCTTT
TAACTTCTACATGTATGCATAAATACAATAGTCTTTTTGTGCTTTATGAG
GACATTGTTGTATGTGCAGGATACATATGATGGGCAGCATAAGAAtatct
atttaattatagtcataaaTGTATTAACACTAGTTCCGACAATGAAAACT
GATTGAAATTTGTATTTACCCTTTTTATATGGAGGCATTTTGATAGAAGA
TGGCCCAAAGGATGTTTATGCTAATTTCAAGAGTAcctagagagagagag
agagagagagacttCGTATATTGTTCTTTACCAGAAGAATTTAATACATT
TTAGGAAGCCTCAAAACAAATTTGTTGTACAATATTGTCTAGAAAACAAA
TGGCCTGTCATAATTGACTAGGGGTTCTAGTTTTCCTTAAAGGAAAAAAG
TGTTAGTGATATTCTGCTGCTTGTTGTTTAGTTGTGTGTTAGAAAAGCTT
AATTCAAGCTTAGAGAAGAAACAGAGAaatcagagagagagagagaagag
agaagtaAAAGGTCTAAATTCCCCTCCCCAATACGTTTGGACAAATTTAA
GAACACCTTTAAACTGAACCTGGATCATAGTGTGAAATTGCTTAAAGAAA
GTGATAGCCTCAGACTTTTGTTTCAACAAAAATAGCCAAGTGTATCTAGT
ACAGGAATCAACAATAGACATGTAATATCTATAACCTGAAACAAATACAA
TAGGAGTAGGACCCCACAGATCaacatacaccaaatcaaagGGCGTTGAG
TAAACAGTAAGAGAAGGTTGTGAAGGCAAAcgatgagatttacctaaagc
ACAAGCATCACAAAACACAACTTTGCTTTTATTCATAAGAGGAATATTAC
ATGTCTTCAAAACATGTTTCAGTGTCTAAGAAATCCTTGAAACCTGAAAT
TATGAAGTATTTGGTCTCATTGGTTGAGTTGTGACTTTATCCTCATCTTG
CACGCCAAAATTTTTATTTAGGTAAACTATAAATATATCATCAATAACTG
ACCATGATTGGCACATAAGGCCTAAACTAAGCCTAGAGATTCACTGGAAC
ACCTATTAGGAAGGGTTCCCAAAAAAACTTAGTTTCCCCTAAACCACTAA
AGGATTCTGATTTGTTCCTCACATATCTTCCTTCTCTGGCATTGAATGTT
GCAAATAACCACATGTTTGATCAAATGCTTGCTGCCTACTTTTtccttct
tattcttcttaatAACTATTTTTCATCCACCTTTTTCTGTTATGTATATG
CAGGTCCTTTTCTGTAGCACGGAGAATGGAAGGTCATCATTTGTTCGGCA
ATTGGAACCAGATTGGCATATCGACTCAAATCCTGACGTTATCTCTCAGC
TAGCT GTATGTTTTACTACATAATAATCTCATACTTTATTACACAGTTAT
CCTGGAAGTTCATGCTTTGATATGATAGCCATATTGCTATTTGTTTTTAG
GATATAATATTATCCTTATTTATATCATCTAATGATCAACACTTATCATG
ATGCAGAGATTTATAAAGTATCAACTTCATGTCTCTCCACTTAGAACCGA
AAAAACGGCTGCTAATGTTCTCAGTGCGCCATCCCTGGAACAGTTCTTTG
GATCCATGTAA back to top Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:3694722..3701132+
>rna-TanjilR_06520_La_Tanjil_v1.0 ID=rna-TanjilR_06520_La_Tanjil_v1.0; Name=rna-TanjilR_06520; organism=Lupinus angustifolius; type=CDS; length=876bp; location=Sequence derived from: Chr_LG13-CM007373.1:3694722..3701132+ (Lupinus angustifolius ATGGCGGATTCCTTCAAAGAAGAACTTTCCCAGCTCATCAAACGCCTCAC TCTCAAGATTTCCAATCTCTTCATTTCCCTTCGCAACCTCGATACACAAT CTATTGGGGCGGTTGCGGGTCTTGCTGTTGCGATTTTTTTCTCCTGGAGG CTGTTGAGATCACCTGGTGGAGCTCAACGCAGGCAACGAAAACGGCAATC TACTACTTCCGCTAGTCCTGGAGTCAGTGCACAGTCAAATGTTTCAGTAG CTCCTTCTGGTGTTTGTTCACCATCGGATGATTCAAGGGCGCAAAATGTC GTTGATGAGTTCTTTCAGCCAGTCAAGCCAACATTGGGCCAGGTTGTCAG GCAGAGGTTGAATGAAGGAAGAAAGGTGACTTGTCGTCTTCTTGGAGTGA TCCTTGAGGAAAGTAGTCCGGAGGAGCTTCAGGTGAAAGGAGCAACTGTG AGGTCCTCTGTGCTGGAAGTATTGTTGgaaataacaaaattttgtGATTT ATATCTCATGGAACGAGTTCTGGATGATGAAAGTGAGAAAAGAGTTCTTG TAGCATTAGAAGATGCTGGGGTATTCACTTCAGGTGGTTTGGTTAAGGAC AAGAAAAGAGTTCTTGTAGCATTAGAAGATGCTGGGGTATTCACTTCAGG TGGTTTGGTTAAGGACAAGGTCCTTTTCTGTAGCACGGAGAATGGAAGGT CATCATTTGTTCGGCAATTGGAACCAGATTGGCATATCGACTCAAATCCT GACGTTATCTCTCAGCTAGCTAGATTTATAAAGTATCAACTTCATGTCTC TCCACTTAGAACCGAAAAAACGGCTGCTAATGTTCTCAGTGCGCCATCCC TGGAACAGTTCTTTGGATCCATGTAA back to top