rna-TanjilR_01112
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH5_ARATH (Formin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=FH5 PE=2 SV=2) HSP 1 Score: 330.487 bits (846), Expect = 7.295e-95 Identity = 175/299 (58.53%), Postives = 216/299 (72.24%), Query Frame = 1 Query: 3316 QVACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETKESQSISNIKTD--------YETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDECLRLFVIVRDFLIILDRVCKEVRDTHKKLTKTVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDYRQRLFPAIAERRIGDTSSDED 4188 +VAC+ELR SRLF KLLEAVLKTGNRMNDGT+RGGAQAFKLDTLLKL+DVKGTDGKTTLLHFVVQEIIR+EG + AR +ESQS S++KT+ E+E+ Y +GL+ VS LSSELE+VKK+A IDA+ + G+ K+GH L K RD V +K+ E GFREA++ FI++AE IM++LEEEK+I ALVK TGDYFHG AGKDE LRLFVIVRDFLIILD+ CKEVR+ + + ++ S +++ T D RQ+LFPAI ERR+ +SSD D Sbjct: 615 EVACKELRGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAARTIRESQSFSSVKTEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKARDFVNSEMKSSGEESGFREALEDFIQNAEGSIMSILEEEKRIMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLIILDKSCKEVREARGRPVRMARKQGSTASASSETPRQTPSL-------------DPRQKLFPAITERRVDQSSSDSD 900 HSP 2 Score: 129.798 bits (325), Expect = 4.838e-29 Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 2 Query: 1715 DAPKTKLKPFFWDKVQANPDHSMVWDHVKSGSFQ*GIYPKPLLHKDDNLSLAANIL**QTFDRFSEEMIKTLFMYNAVDNNNHQRQKESTSQEDSPQYIQIIDKRKAQNLLILLRALNVPMEEVCDALYEGD 2110 DAPKTKLKPFFWDKVQANP+HSMVW+ ++SGSFQ F+EEMI++LF Y A D N + + K S+ Q PQ++QI++ +K QNL ILLRALN EEVCDAL EG+ Sbjct: 437 DAPKTKLKPFFWDKVQANPEHSMVWNDIRSGSFQ-----------------------------FNEEMIESLFGYAAADKNKNDK-KGSSGQAALPQFVQILEPKKGQNLSILLRALNATTEEVCDALREGN 538 HSP 3 Score: 109.768 bits (273), Expect = 8.681e-23 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILEV 2969 GNELP EF+QTLLKMAPT +EELKL+L+ GE++QL A+RFLK +VDIPFAFKR+EALLF+ TL EE+ ES LEV Sbjct: 537 GNELPVEFIQTLLKMAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKESFQKLEV 616
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH11_ORYSJ (Formin-like protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=FH11 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 2.921e-82 Identity = 147/236 (62.29%), Postives = 186/236 (78.81%), Query Frame = 1 Query: 3316 QVACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETKESQS-ISNIKTD------YETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDECLRLFVIVRDFLIILDRVCKEVRDTHK 4002 +VAC+ELR+SRLF KLLEAVLKTGNRMN GT+RGGAQAF+LDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEG + R KE S +S++KTD +TED Y ++GL+V+S+L EL++V+KAAI+DA+ + S A LGH L+KT + + ++K+L+E GF + F++ ++ DI LLEEEKK+ LVK T DYFHG+AGKDE LRLFVIVRDFL +LD+VCKEV++ K Sbjct: 649 EVACQELRNSRLFMKLLEAVLKTGNRMNVGTFRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRAERAAKEQNSGVSSVKTDDLGDKSEQTEDGYKQLGLKVISSLGDELQDVRKAAILDADQLTMSVASLGHKLMKTNEFLNMDMKSLDEDSGFHRKLTHFVQQSQTDITFLLEEEKKMRLLVKDTVDYFHGSAGKDEGLRLFVIVRDFLAMLDKVCKEVKEASK 884 HSP 2 Score: 108.227 bits (269), Expect = 2.319e-22 Identity = 62/137 (45.26%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 1697 ASENEADAPKTKLKPFFWDKVQANPDHSMVWDHVKSGSFQ*GIYPKPLLHKDDNLSLAANIL**QTFDRFSEEMIKTLFMYNAVDNNNHQRQKESTSQEDSPQYIQIIDKRKAQNLLILLRALNVPMEEVCDALYEG 2107 A EN +A KTKLKPFFWDKV ANP SMVWDH+KSGSFQ F+E++++ LF YN+ D ++ K+ S +D+ Q I+I+D +KAQNL I LRAL V +EVC A+ EG Sbjct: 467 AVENSNEA-KTKLKPFFWDKVTANPARSMVWDHLKSGSFQ-----------------------------FNEQLMENLFGYNSTDKSSD--TKKDLSSKDATQLIRILDPKKAQNLAISLRALGVSPQEVCSAVKEG 571 HSP 3 Score: 94.3597 bits (233), Expect = 4.449e-18 Identity = 40/80 (50.00%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILEV 2969 G+ELP + +QTL++ +P++DEEL+L+L+ GEL QL PA++FL+ ++DIP+ F+R++ALLF+ L EE ++ +S A LEV Sbjct: 571 GSELPSDLIQTLIRWSPSNDEELRLRLYSGELFQLGPAEQFLRVIIDIPYIFQRLDALLFMANLPEEASNVKQSFATLEV 650
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH3_ARATH (Formin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FH3 PE=2 SV=3) HSP 1 Score: 274.248 bits (700), Expect = 2.652e-76 Identity = 153/290 (52.76%), Postives = 193/290 (66.55%), Query Frame = 1 Query: 3316 QVACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETKESQSISNIKTDYETEDY-------YSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDECLRLFVIVRDFLIILDRVCKEVRDTHKKLTKTVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDYRQRLFPAIAERRI 4164 +VAC++LR+SRLF KLLEAVLKTGNRMN GT+RG AQAFKLDTLLKLSDVKGTDGKTTLLHFVV EIIRSEG + R +S+S S++KTD D Y GLQVV+ L++ELE+VK+AAIIDA+ +A + A + L R+ LK ++E F A+ FIE A+ D L EEE++I LVK + DYFHG + K+E LRLF IVRDFLI+L++VC+EV++T K + K+ + TS S D+RQRLFPAIAERR+ Sbjct: 504 EVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALR--LQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREF----LKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPS-----------------PDFRQRLFPAIAERRM 770 HSP 2 Score: 117.472 bits (293), Expect = 2.978e-25 Identity = 65/137 (47.45%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 1703 ENEADAPKTKLKPFFWDKVQANPDHSMVWDHVKSGSFQ*GIYPKPLLHKDDNLSLAANIL**QTFDRFSEEMIKTLFMYN-AVDNNNHQRQKESTSQEDSPQYIQIIDKRKAQNLLILLRALNVPMEEVCDALYEGD 2110 ++E APKTKLKPFFWDK+ ANPD MVW + +GSFQ F+EE +++LF YN N N Q+ +S+ +E QYIQIID RKAQNL ILLRALNV EEV DA+ EG+ Sbjct: 321 DSETGAPKTKLKPFFWDKM-ANPDQKMVWHEISAGSFQ-----------------------------FNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGN 427 HSP 3 Score: 112.079 bits (279), Expect = 1.525e-23 Identity = 54/80 (67.50%), Postives = 68/80 (85.00%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILEV 2969 GNELP E LQTLLKMAPTS+EELKL+L+ G+L L PA+RFLK LVDIPFAFKR+E+LLF+++L+EE++ E+L LEV Sbjct: 426 GNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEV 505
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH18_ORYSJ (Formin-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=FH18 PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.434e-72 Identity = 135/256 (52.73%), Postives = 179/256 (69.92%), Query Frame = 1 Query: 3316 QVACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETK--------------------ESQS------------ISNIKTDYETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDECLRLFVIVRDFLIILDRVCKEV 3987 +VACEELR SRLF+KLLEAVLKTGNRMNDGT+RGGAQAFKLDTLLKL+DVKG DGKTTLLHFVVQEIIRSEG + AR +SQS S+++ + + + Y ++GL VVS+L +L+NV+KAA DA+++ + A LGH LVK + + +++LEE GF+ + SF++ +++ + LLE+EK++ +LV+ T DYFHG+ GKDE LRLFV+VRDFL ILD+VC+EV Sbjct: 592 EVACEELRGSRLFKKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFVVQEIIRSEGVRAARAASGGGGGSSISSISSSDDLILLQSQSSIGSNSGRSSVDASSLEQEQDETERYRQLGLGVVSSLGDDLQNVRKAASFDADALTITVASLGHRLVKANEFLSTGMRSLEEDSGFQRRLASFVQQSQEQVTRLLEDEKRLRSLVRATVDYFHGSTGKDEGLRLFVVVRDFLGILDKVCREV 847 HSP 2 Score: 93.9745 bits (232), Expect = 7.148e-18 Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 1715 DAPKTKLKPFFWDKVQANPDHSMVWDHVKSGSFQ*GIYPKPLLHKDDNLSLAANIL**QTFDRFSEEMIKTLFMYNAVDNNNHQRQKESTSQEDSPQYIQIIDKRKAQNLLILLRALNVPMEEVCDALYEG 2107 D K KLKPFFWDKV ANP+ +MVWD +K+GSFQ F+EEMI++LF + + + +KES +++ Q+++I+D +KAQNL I L+AL+V E+V A+ EG Sbjct: 415 DPNKAKLKPFFWDKVTANPNQAMVWDQIKAGSFQ-----------------------------FNEEMIESLFGAQSTEKKSTDAKKESG--KEATQFVRILDPKKAQNLAISLKALSVSAEQVRAAVMEG 514 HSP 3 Score: 90.1225 bits (222), Expect = 9.599e-17 Identity = 37/80 (46.25%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILEV 2969 G++LP + +QTL++ +PTSDEEL+L+L+ GE +QL PA++F++ ++D+P+ ++R++ALLF+ L EE + +S A LEV Sbjct: 514 GHDLPPDLIQTLVRWSPTSDEELRLRLYAGEPAQLGPAEQFMRAIIDVPYLYQRLDALLFMAALPEEAAAVEQSFATLEV 593
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH10_ORYSJ (Formin-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=FH10 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.150e-70 Identity = 133/241 (55.19%), Postives = 175/241 (72.61%), Query Frame = 1 Query: 3316 QVACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTAR---ETKESQSISNIKTDYETE------DYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDECLRLFVIVRDFLIILDRVCKEVRDTHKKLT 4011 + AC EL+ RLF KLLEA+LKTGNR+NDGT+RGGA AFKLDTLLKLSDVKG DGKTTLLHFVVQEIIRSEG + AR E S + D E +YYS +GL++VS LS+EL+NVK+ A +DA++++ S A L H L++ ++ + ++ +LEE+ GF +++SFIE AE + LL+E+K++ LVK+T YFHGN KD+ RLFVIVRDFL++LD+ CKEV + KK T Sbjct: 604 EAACGELKH-RLFLKLLEAILKTGNRLNDGTFRGGANAFKLDTLLKLSDVKGADGKTTLLHFVVQEIIRSEGVREARLAMENGRSPPFPSTSDDNSNESLQEDGNYYSNLGLKIVSGLSNELDNVKRVAALDADALSTSVANLRHELLRAKEFLNSDMASLEENSGFHRSLESFIEHAETETNFLLKEDKRLRMLVKRTIRYFHGNDEKDDGFRLFVIVRDFLVMLDKACKEVGASQKKAT 843 HSP 2 Score: 93.9745 bits (232), Expect = 6.926e-18 Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 1712 ADAPKTKLKPFFWDKVQANPDHSMVWDHVKSGSFQ*GIYPKPLLHKDDNLSLAANIL**QTFDRFSEEMIKTLFMYNAVDNNNHQRQKESTSQEDSPQYIQIIDKRKAQNLLILLRALNVPMEEVCDALYEGD 2110 +AP+ KL+PF+WDKV ANPD SM W +K GSF +EEMI+ LF Y A N N+ + KE + + SPQ++ ++D +K+ NL ++ +A+NV EE+ DAL EG+ Sbjct: 425 VNAPRAKLRPFYWDKVLANPDQSMAWHDIKFGSFH-----------------------------VNEEMIEELFGYGA-GNQNNVKDKEISIADPSPQHVSLLDVKKSCNLAVVFKAMNVRAEEIHDALVEGN 527 HSP 3 Score: 85.1149 bits (209), Expect = 3.596e-15 Identity = 41/80 (51.25%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILEV 2969 GNELP L+T+L+M PT +EE KL+L++G+ SQL A++ +K L+DIPFAF+R+ ALLF+ +L+E+ +S ES LE Sbjct: 526 GNELPRLLLETILRMKPTDEEEQKLRLYNGDCSQLGLAEQVMKALIDIPFAFERIRALLFMSSLQEDASSLRESFLQLEA 605
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH1_ARATH (Formin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FH1 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 7.140e-58 Identity = 120/228 (52.63%), Postives = 160/228 (70.18%), Query Frame = 1 Query: 3316 QVACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETKESQSISNIKTDYETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRG--FREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDEC--LRLFVIVRDFLIILDRVCKEV 3987 + ACEELR+SR+F KLLEAVLKTGNRMN GT RG A AFKLDTLLKL DVKG DGKTTLLHFVVQEIIR+EG + S +N +TD + ++GLQVVS+L SEL NVKKAA +D+E ++ +KL G+ K + ++ EE F E++K+F++ AE++I+ + +E +LVK+ +YFHGN+ K+E R+F++VRDFL ++DRVCKEV Sbjct: 775 EAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRAEGTRL--------SGNNTQTD---DIKCRKLGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQVQSTITEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFLVVRDFLGVVDRVCKEV 991 HSP 2 Score: 97.8265 bits (242), Expect = 4.855e-19 Identity = 56/139 (40.29%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 1697 ASENEADAPKTKLKPFFWDKVQANPDHSMVWDHVKSGSFQ*GIYPKPLLHKDDNLSLAANIL**QTFDRFSEEMIKTLFMYNAVDNNNHQRQKESTSQEDSP-QYIQIIDKRKAQNLLILLRALNVPMEEVCDALYEGD 2110 ASE + PK KLK WDKV+A+ D MVWDH++S SF + EEMI+TLF+ +++N +Q Q SP Q +++D +KAQN+ ILLRALNV +EEVC+AL EG+ Sbjct: 586 ASEAAEETPKPKLKALHWDKVRASSDREMVWDHLRSSSF-----------------------------KLDEEMIETLFVAKSLNNKPNQSQTTPRCVLPSPNQENRVLDPKKAQNIAILLRALNVTIEEVCEALLEGN 695 HSP 3 Score: 66.6254 bits (161), Expect = 1.691e-9 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 2748 EFLQTLLKMAPTSDEELKLKLF-DGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILEV 2969 E L++LLKMAPT +EE KLK + D +L A++FLK ++DIPFAFKR++A+L++ + E+ +S LE Sbjct: 702 ELLESLLKMAPTKEEERKLKAYNDDSPVKLGHAEKFLKAMLDIPFAFKRVDAMLYVANFESEVEYLKKSFETLEA 776
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH11_ARATH (Formin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=FH11 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.270e-58 Identity = 124/228 (54.39%), Postives = 155/228 (67.98%), Query Frame = 1 Query: 3322 ACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETK---ESQSISNIKTDYETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDE--CLRLFVIVRDFLIILDRVCKEVR 3990 AC+EL+SSRLF KLLEAVLKTGNRMN GT RGGA+AFKLD LLKLSDVKGTDGKTTLLHFVVQEI RSEG + + +Q + +T E E+ Y +GL +VS L++EL NVKK A ID E + S + L GL + L + LK EE+R F ++ SF+ E + L E+EK+I V + +YFHG+ DE LR+FVIVRDFL +LD VC+E+R Sbjct: 642 ACKELKSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDALLKLSDVKGTDGKTTLLHFVVQEISRSEGIRVSDSIMGRIMNQRSNKNRTPEEKEEDYRRMGLDLVSGLNTELRNVKKTATIDLEGLVTSVSNLRDGLGQLSCLASEKLKGDEENRAFVSSMSSFLRYGEKSLEELREDEKRIMERVGEIAEYFHGDVRGDEKNPLRIFVIVRDFLGMLDHVCRELR 869 HSP 2 Score: 70.4774 bits (171), Expect = 9.655e-11 Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 2 Query: 1718 APKTKLKPFFWDKVQANPDHSMVWDHVKSGSFQ*GIYPKPLLHKDDNLSLAANIL**QTFDRFSEEMIKTLFMYNAVDNNNHQRQKESTSQEDSPQYIQIIDKRKAQNLLILLRALNVPMEEVCDALYEGD 2110 AP KLKP WDKV+A PD +MVWD +++ SF+ EEMI++LF Y + + +E S+ SP +++ ++ QN ILL+ALN +++C AL +G+ Sbjct: 466 APLPKLKPLHWDKVRATPDRTMVWDKLRTSSFE-----------------------------LDEEMIESLFGYTM---QSSTKNEEGKSKTPSPGK-HLLEPKRLQNFTILLKALNATADQICSALGKGE 563 HSP 3 Score: 68.9366 bits (167), Expect = 3.365e-10 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILE 2966 G L + L+ L+KM PT +EELKL+ + G + +L A++FL+ LV +PFAF+R EA+L+ T ++E+ S ++LE Sbjct: 562 GEGLCLQQLEALVKMVPTKEEELKLRSYKGAVDELGSAEKFLRALVGVPFAFQRAEAMLYRETFEDEVVHLRNSFSMLE 640
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH9_ORYSJ (Formin-like protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=FH9 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.126e-56 Identity = 116/227 (51.10%), Postives = 162/227 (71.37%), Query Frame = 1 Query: 3322 ACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETKESQSISNIKTDYETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDEC--LRLFVIVRDFLIILDRVCKEVRDT 3996 AC EL+SS+LF +LLEAVLKTGNRMN GT RGGA AFKLD LLKL+D++GTDGKTTLLHFVV+E+ RS+G K + E+ S S T E E+ YS +G + VS LS+EL NVKK A ID +++ S + L GL + R+LVEK+L + +++ F + +KSF+ AE+ + L +E ++ V++ +Y+HG KDE L++F+IV+DFL +LD+VC+E+R T Sbjct: 645 ACTELKSSKLFLRLLEAVLKTGNRMNVGTLRGGASAFKLDALLKLADIRGTDGKTTLLHFVVKEMARSKGLKALEKLNETPS-SCHDTPTEREE-YSSMGTEFVSELSNELGNVKKVASIDLDTLRNSISNLSCGLAQLRNLVEKDLASDDKNNNFLQCMKSFLNHAENTMQGLKADEAQVLLNVRELTEYYHGEVSKDESNLLQIFIIVKDFLGLLDKVCREMRGT 869 HSP 2 Score: 65.0846 bits (157), Expect = 4.756e-9 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILE 2966 GN L + L+ L+KM PT +EE KL +DG+++ L PA+ F+K L+ IP AF RME +L+ +E+ S A++E Sbjct: 565 GNGLSVQQLEALVKMKPTKEEEEKLLNYDGDINMLDPAENFVKVLLTIPMAFPRMEVMLYKENFDDEVAHIKMSFAMIE 643
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH9_ORYSI (Formin-like protein 9 OS=Oryza sativa subsp. indica OX=39946 GN=FH9 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.224e-56 Identity = 116/227 (51.10%), Postives = 162/227 (71.37%), Query Frame = 1 Query: 3322 ACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKKTARETKESQSISNIKTDYETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKNLKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDEC--LRLFVIVRDFLIILDRVCKEVRDT 3996 AC EL+SS+LF +LLEAVLKTGNRMN GT RGGA AFKLD LLKL+D++GTDGKTTLLHFVV+E+ RS+G K + E+ S S T E E+ YS +G + VS LS+EL NVKK A ID +++ S + L GL + R+LVEK+L + +++ F + +KSF+ AE+ + L +E ++ V++ +Y+HG KDE L++F+IV+DFL +LD+VC+E+R T Sbjct: 647 ACTELKSSKLFLRLLEAVLKTGNRMNVGTLRGGASAFKLDALLKLADIRGTDGKTTLLHFVVKEMARSKGLKALEKLNETPS-SCHDTPTEREE-YSSMGTEFVSELSNELGNVKKVASIDLDTLRNSISNLSCGLAQLRNLVEKDLASDDKNNNFLQCMKSFLNHAENTMQGLKADEAQVLLNVRELTEYYHGEVSKDESNLLQIFIIVKDFLGLLDKVCREMRGT 871 HSP 2 Score: 65.0846 bits (157), Expect = 4.721e-9 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 2730 GNELPYEFLQTLLKMAPTSDEELKLKLFDGELSQLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILE 2966 GN L + L+ L+KM PT +EE KL +DG+++ L PA+ F+K L+ IP AF RME +L+ +E+ S A++E Sbjct: 567 GNGLSVQQLEALVKMKPTKEEEEKLLNYDGDINMLDPAENFVKVLLTIPMAFPRMEVMLYKENFDDEVAHIKMSFAMIE 645
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Match: FH1_ORYSJ (Formin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=FH1 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 4.340e-56 Identity = 116/231 (50.22%), Postives = 167/231 (72.29%), Query Frame = 1 Query: 3316 QVACEELRSSRLFRKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEG---KKTARETKESQSISNIKTDYETEDYYSEIGLQVVSNLSSELENVKKAAIIDAESIAGSAAKLGHGLVKTRDLVEKN--LKNLEEHRGFREAVKSFIESAEDDIMTLLEEEKKITALVKKTGDYFHGNAGKDEC--LRLFVIVRDFLIILDRVCKEV 3987 + AC+ELR+SRLF KLLEAVLKTGNRMN GT RG A AFKLDTLLKL DVKGTDGKTTLLHFVVQEIIR+EG + + T +Q+ + ++ + E + ++GLQVV+ L +EL NVKKAA +D++ ++ +KL G+ K +++ N +K+ E+ F ++++ F++ A+DDI+ + +E +LVK+ +YFHG++ K+E R+F++VRDFL +LD+VCKEV Sbjct: 685 ETACDELRNSRLFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQA-NPLRDELECK----KLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVVRDFLSVLDQVCKEV 910 HSP 2 Score: 76.6406 bits (187), Expect = 1.478e-12 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 2748 EFLQTLLKMAPTSDEELKLKLFDGELS--QLAPADRFLKTLVDIPFAFKRMEALLFIVTLKEELNSTMESLAILEV 2969 E L+TLLKMAPT +EE+KL+ F E S +L PA++FLK ++DIPFAFKR++A+L+I + E+N +S LE Sbjct: 611 ELLETLLKMAPTKEEEIKLREFKEETSPIKLGPAEKFLKAVLDIPFAFKRVDAMLYIANFESEVNYLKKSFETLET 686 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01112 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01112_La_Tanjil_v1.0 ID=rna-TanjilR_01112_La_Tanjil_v1.0; Name=rna-TanjilR_01112; organism=Lupinus angustifolius; type=mRNA; length=4197bpback to top protein sequence of rna-TanjilR_01112_La_Tanjil_v1.0 >rna-TanjilR_01112_La_Tanjil_v1.0 ID=rna-TanjilR_01112_La_Tanjil_v1.0; Name=rna-TanjilR_01112_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=937bpback to top mRNA from alignment at Chr_LG13-CM007373.1:4296517..4300713+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01112_La_Tanjil_v1.0 ID=rna-TanjilR_01112_La_Tanjil_v1.0; Name=rna-TanjilR_01112; organism=Lupinus angustifolius; type=mRNA; length=4197bp; location=Sequence derived from: Chr_LG13-CM007373.1:4296517..4300713+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:4296517..4300713+ >rna-TanjilR_01112_La_Tanjil_v1.0 ID=rna-TanjilR_01112_La_Tanjil_v1.0; Name=rna-TanjilR_01112; organism=Lupinus angustifolius; type=CDS; length=2814bp; location=Sequence derived from: Chr_LG13-CM007373.1:4296517..4300713+ (Lupinus angustifoliusback to top |