rna-TanjilR_01113
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: OCT4_ARATH (Organic cation/carnitine transporter 4 OS=Arabidopsis thaliana OX=3702 GN=OCT4 PE=2 SV=1) HSP 1 Score: 488.419 bits (1256), Expect = 1.680e-160 Identity = 255/394 (64.72%), Postives = 304/394 (77.16%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKD-----AVTGSLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLGGWLPFGVFAFCGIAGGIFAFYLPETLNQPLYDTMTGIE 3254 GAG+FGHLSDS LGRKGSL VVCI+N IFG T+FSPNYWTYV+ R LTG STGGVGL AFVLATEP+G RGVAGM TFYFF+ GI +L+GIAY+F++WR L++ +SLPSLLF+++V+PFISESPRWYL+RG++ EAM +M +IA +NG H+P GV L A + V++ + AV GSL DVI SPL R RL ++V I+F S+VYYGLSLNV N++TN+YLNV +NAV+E PAF +TA+LLD+ GRKPL+IGT WFS FC +G V G WK V+MV G+LGIFGMAGTYNLLFIY ELFPTVVRNAALGCATQAAQMGAILAP +VVLG LPFGVFA CG+ GG AFYLPETLN+PLYDTM G+ Sbjct: 138 GAGVFGHLSDSKLGRKGSLTVVCIINAIFGIATAFSPNYWTYVVLRFLTGFSTGGVGLTAFVLATEPIGPSKRGVAGMSTFYFFSAGIAVLSGIAYVFRSWRELFIVSSLPSLLFLLIVIPFISESPRWYLVRGKVDEAMKLMHSIAKTNGRHIPAGVTL--------------------ALDDDVENNNGERNTAVEGSLKDVILSPLMRMRLVISVAISFTVSIVYYGLSLNVGNLKTNLYLNVFVNAVSEMPAFAITAVLLDKYGRKPLSIGTQWFSCVFCLVGFSVWGAGPWKSVRMVSGVLGIFGMAGTYNLLFIYIAELFPTVVRNAALGCATQAAQMGAILAPFVVVLGEELPFGVFAVCGLVGGGLAFYLPETLNKPLYDTMFGMH 511 HSP 2 Score: 178.718 bits (452), Expect = 2.580e-46 Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 1 Query: 34 EEAQDHRTPLLP--PLSKPGE-LEKLSIDEMLQKYCGEFGRWQLRHFILTNLAWALEAFHTMVMIFADREPEWRCRNGAAGFGCDASAKSV-CQLEPGSWEWIGDKAATTVAEWGLVCGDKFKVGLVQAVFFGGCMIG 435 D R PLL P+ K E E+L IDEMLQ+YCGEFGRWQL+HF+LT +AWALEAFHTMVMIFAD+EPEWRC G D S+ C+L+P SWEW K ++TV+EWGL+CGDK+KVGLVQA+FF GCMIG Sbjct: 7 RNGNDVRQPLLEKIPVKKEAEGEERLCIDEMLQRYCGEFGRWQLKHFVLTCIAWALEAFHTMVMIFADQEPEWRC------VGSDCRVGSLNCELDPSSWEWTAGKGSSTVSEWGLICGDKYKVGLVQALFFAGCMIG 138
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: OCT1_ARATH (Organic cation/carnitine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=OCT1 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.019e-62 Identity = 138/395 (34.94%), Postives = 210/395 (53.16%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYI-FQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGSLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVS------NVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLG---GWLPFGVFAFCGIAGGIFAFYLPETLNQPLYDTM 3242 G+G++G+L+DS GRK +L++ C+L + SFSPN W Y R G G+G C VLATE VG + RG G F+FF G + L +AY+ ++WRNLY S L + V +LPF ESPRW L++GR KEAM V+ +A NG LP + + ++ + ++D T S ++ R+ + ++ F VYYG+ LN N+ N+YL V +NA+ E PA + + LL + R+PL + + +GF C + A++S + V K +++ +G + Y++L++Y ELFPT VRN A+ QA +GA AP++V LG + F VF + GI + +L ET N PLY+T+ Sbjct: 150 GSGVYGYLADSWFGRKKTLLLSCVLTFVTAFAISFSPNVWVYAFLRFANGFFRSGIGSCCIVLATEIVGKKWRGQVGQYGFFFFTLGFLSLPLMAYLERKSWRNLYRIISFLPLGYAVCLLPFAYESPRWLLVKGRNKEAMVVLKKLARLNGKQLPADL----------------------SLVDPIPERDDQTSSSEKFWKTKWAVKRIIMVMMAGFGSGFVYYGIQLNAENLNFNLYLTVAVNALMEFPAVFIGSFLLGVMNRRPLFSNSSYLAGFACLLCAVLSIHRVIRAISVAKWLQLAVEAVGFMASSTAYDVLYVYCVELFPTNVRNTAVSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWLRETRNAPLYETL 522 HSP 2 Score: 88.9669 bits (219), Expect = 7.915e-17 Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 82 PGELEKLSIDEMLQKYCGEFGRWQLRHFILTNLAWALEAFHTMVMIFADREPEWRCRNGAAGFGCDASAKSVCQLEPGSWEWIGDKAATTVAEWGLVCGDKFKVGLVQAVFFGGCMIG 435 P L++DE+++++ G G Q+ H +L ++AW +A T++ IF+D +P R G S+C L G WEWIG K+ T V+EW L+C KF V + +FF G + G Sbjct: 37 PNNRYALTVDEVIEQHIGALGFAQILHALLVSIAWIFDAQTTLISIFSDAQPAARL----LATGAIVEGASLCGLASGEWEWIGPKSDTVVSEWNLICQHKFLVAVPSTLFFIGSLFG 150
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: OCT3_ARATH (Organic cation/carnitine transporter 3 OS=Arabidopsis thaliana OX=3702 GN=OCT3 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.818e-61 Identity = 136/388 (35.05%), Postives = 213/388 (54.90%), Query Frame = 3 Query: 2109 LSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQ--TWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGSLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSNVGVWKG-VKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLG---GWLPFGVFAFCGIAGGIFAFYLPETLNQPLYDTMTGIE 3254 L+DSSLGRK L++ C++ ++ LT+FS + W Y R L GC +G CA VL+TE VG + RG G F+ F G + L + YI + +WRNLY+ TS+P+L++ LV F+ ESPRW +++GR +EA++++ +IA++ + +S + + +Q K V +L ++R + RL A+V+ F +VYYG+ L + N+ N+YL VV NA++E PAFL+T +D++ R+ IG SG AL++ +G G +++V ++ F +N+ IYT E+FPT VRN+A+ QA G + +P+MV G + +G+F G+F F LPET L DTM E Sbjct: 142 LADSSLGRKNMLLLSCLIMSLSSMLTAFSTSIWVYAFLRFLNGCGRATIGTCALVLSTELVGKKWRGQVGAMGFFCFTLGFLSLPMLGYINEGNSWRNLYVWTSIPTLIYCCLVRSFVRESPRWLIVKGRKEEAVSILQSIASN-------------------AITMSFTNLCFEVENDQSKSNPDVYDALKILVRKSWSFRRLLAAMVVGFGIGMVYYGMPLALTNLNFNLYLGVVFNALSEFPAFLITFFFIDKINRRDALIGFTALSG---ISSALIAVLGQQLGSLQIVLELVSFFSACTAFNMTLIYTIEMFPTCVRNSAISMVRQALVFGGVFSPVMVAAGRENQFWSYGLFGLIIGLCGLFVFGLPETRGSVLCDTMDEEE 507 HSP 2 Score: 77.411 bits (189), Expect = 3.505e-13 Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 103 SIDEMLQKYCGEFGRWQLRHFILTNLAWALEAFHTMVMIFADREPEWRCRNG-AAGFGCDASAKSVCQLEPGSWEWIGDKAATTVAEWGLVCGDKFKVGLVQAVFFGGCMIG 435 S++E +++ G+FG Q L + AW +A T + +F D +P W C N C+ S+ ++C L +W W + + ++EWGL C F G + FF GC+IG Sbjct: 24 SLEETIERCIGDFGWAQFLQAALVSFAWFFDAQQTFITVFTDSQPMWHCDNSDRVDSVCNTSSSNLCTLPNQTWSWDLNPHVSIISEWGLQCAGSFLKGFPASSFFLGCLIG 135
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: OCT2_ARATH (Organic cation/carnitine transporter 2 OS=Arabidopsis thaliana OX=3702 GN=OCT2 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.626e-55 Identity = 132/400 (33.00%), Postives = 209/400 (52.25%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQ--TWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGSLLDVIRSPLTR----TRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSN--VGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLGGWLPFGVFAFCGIA---GGIFAFYLPETLNQPLYDTMTGIE 3254 G + L+DSSLGRK L + C++ I LT FSPN W Y + R + G +G CA VL+TE VG + RG G+ +F+ F G + L +AY+ + +WR LY TS+P++++ VLV F+ ESPRW +RGR +EA++++ +A+ + G + S + E+ ++K + ++ ++ + + RL + I F +VYYG+ L + N++ NIYL+ NA+ + PA L+T L+D++ R+ IG G + + N +G +++ ++ F +N+ IYT ELFPT VRN+A+ A QA +G + +P+MV G F F G+A G+FA LPET L DTM E Sbjct: 127 GGLVLSTLADSSLGRKNMLFLSCLVMAISTMLTVFSPNIWVYAVLRFVNGFGRATIGTCALVLSTELVGKKWRGRVGIMSFFGFMLGFLSLPLMAYMNRGSSWRILYAWTSIPTIIYCVLVRFFVCESPRWLFVRGRREEAISILKRVASIPSTDVSSG--------------GAISMSFSSLPFEEDEEKPSTNVNIFTTMKVLVEKRWALKRLSAVMAIAFGIGLVYYGMPLALSNLDFNIYLSAAFNALMDLPANLITLFLVDKLSRRNALIGFTALGGVSSVLIFALHNMRIGNHGALQLALELISYFSACSAFNMEMIYTIELFPTCVRNSAIAMARQALVLGGVFSPIMVAAGRKNAFWSFGLFGLAIGLLGLFAVGLPETRGSDLCDTMDEEE 512 HSP 2 Score: 79.7221 bits (195), Expect = 5.943e-14 Identity = 39/126 (30.95%), Postives = 60/126 (47.62%), Query Frame = 1 Query: 58 PLLPPLSKPGELEKLSIDEMLQKYCGEFGRWQLRHFILTNLAWALEAFHTMVMIFADREPEWRCRNGAAGFGCDASAKSVCQLEPGSWEWIGDKAATTVAEWGLVCGDKFKVGLVQAVFFGGCMIG 435 P P L+ S+D+ ++ Y G FG Q L + + +A T + +F D EP W C + + C S ++C L +W W + ++EWGL C F GL ++ FF GC+IG Sbjct: 4 PTQPLLTDSNSSSPRSLDDTIESYIGSFGWAQFLQAALVSFSGVFDAQQTFISVFTDSEPTWHCTDSNSI--CHESISNICILPKTAWSWDYSPHVSVISEWGLQCAGSFVKGLPESSFFVGCLIG 127
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: ORCT_DROME (Organic cation transporter protein OS=Drosophila melanogaster OX=7227 GN=Orct PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 2.893e-51 Identity = 131/398 (32.91%), Postives = 205/398 (51.51%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGS-----LLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLGG-WLPFGVFAFCG---IAGGIFAFYLPETLNQPLYDTMTGIE 3254 G+ IFG +SD LGRK + +L IFG L + +P Y++Y + R++ G +T GV L A+V+A E VG R AG+ FF+ G ++ AG AY WR L +A +LP LLF+ I ES RW L++GR EA ++ A N +P + L +E + + K +D + S + D++R P R + L F+ S VYYGLS N N+ N +N +++ E P + + L+R GR+ + GT+ +G V + W + + C ++G + +Y ++I++ E FPTVVRN LG ++ A++G ILAP + +LG W P + CG + G+ + LPETLN+P+ +T+ E Sbjct: 144 GSLIFGQMSDK-LGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYW-IIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDE-----------------VAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNW--LIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLI-ICGALSLTAGLLSLLLPETLNKPMPETIEDGE 519
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: S22FL_XENLA (Solute carrier family 22 member 15-like OS=Xenopus laevis OX=8355 GN=slc22a15b PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.405e-51 Identity = 129/400 (32.25%), Postives = 196/400 (49.00%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVL--VLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTG----SLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRV--GRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLGGW---LPFGVFAFCGIAGGIFAFYLPETLNQPLYDTMTGIE 3254 G FG LSD LGR+ + + IFG T+ +P+Y + + R G GG+ L +FVL E VG + G T FA GI A + + + WR L + P + F++L VLP ESPRW RG EA V+ ++A NG P + ++K T S+ D+++ + R R L + I ++CS+VYYGL+LN ++ N+YLNV L + E PAF + +++ GR+ T G L F+GF C V V + G ++ +N+++IYT+EL+PTVVRNA LG A + G IL+P + + + +PF F GI+ GI + LPET N+P+ +T+ ++ Sbjct: 102 GNVFFGPLSDK-LGRRPVYLSGLFFDIIFGYFTALAPSYEVFAVSRFFVGVMNGGMALVSFVLTQEYVGKSYWALTGSLTNLIFAVGIAFYALLGFYIRNWRTLAFVANSPGIFFLLLSFVLP---ESPRWLYSRGYTAEAEAVLESMAAGNGVERP---------------------------VVRLKSCPGTTANSAHSVFDLVKYGVLRWRTILLMYIWYVCSLVYYGLTLNAGELKGNLYLNVALYGLVEVPAFPLCLYFIEKSWSGRRRATAGFLVFAGFACIFTIFVPETNGDFINPTVLALFGKLSVSAAFNVVYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPAMKSFNPSMPFVAFGISGISAGILSLLLPETRNKPIAETIEDLQ 470
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: S22FL_XENTR (Solute carrier family 22 member 15-like OS=Xenopus tropicalis OX=8364 GN=slc22a15b PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.661e-46 Identity = 123/391 (31.46%), Postives = 188/391 (48.08%), Query Frame = 3 Query: 2097 IFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGSLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRV--GRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPM---MVVLGGWLPFGVFAFCGIAGGIFAFYLPETLNQPLYDTMTGIE 3254 +FG LSD LGR+ + + FG T+ +P+Y + + R G GG+ L +FVL E VG + G T FA GI A + + + WR L + P + F +L + ESPRW G EA V+ ++A NG P + K A S+ D+++ + R R L + I ++CS+VYYGL+LN ++ N+YLNV L + E PAF + +++ GR+ T G L F+GF C + V + G ++ +N+++IYT+EL+PTVVRNA LG A + G IL+P M L +PF F GI+ GI + LPET N+P+ +++ ++ Sbjct: 105 LFGPLSDK-LGRRPVYLSGLFFDITFGYCTALAPSYEVFAVSRFFVGIMNGGMALVSFVLTQEYVGKSYWALTGSLTNLIFAVGIAFYALLGFYIRNWRTLAFVANSPGIFFFLLSF-LLPESPRWLYSHGYTTEAEGVLQSMAVGNGVERP---------------------VVKLKSCPGTSSKSA--HSVFDLVKYGVLRWRTILLMYIWYVCSLVYYGLTLNAGELKGNLYLNVALYGLVEVPAFPLCLYFIEKSWSGRRKATAGFLGFAGFACIFTIFLPETNGDLLNPTVLALFGKLSVSAAFNVVYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPTMKSLNPSMPFVAFGISGISAGILSLLLPETRNKPIAESIEDLQ 470
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: OCTL_DROME (Organic cation transporter-like protein OS=Drosophila melanogaster OX=7227 GN=Orct2 PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 4.559e-46 Identity = 129/396 (32.58%), Postives = 201/396 (50.76%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGSLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVK---MVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLGG-WLPFGVFAFCG---IAGGIFAFYLPETLNQPLYDTMTGIE 3254 G+ +FG LSD GRK L ++ +FG L +P Y+TY RL+ G +T GV L A+V+A E VG R AG+ FF+ G ++ A AY WR L +A +LP L+F+ I ES RW L++GR A+ M A N V ++ + S +S + LE + + S+ D+ P R + L + + S VYYGLS N N+ N+ LN V++ E PA++ L L+R GR+ + G L +G +L++ V + + + + C +LG + +Y ++I++ E FPTVVRN ALG A+ A++ ++AP + L W P + CG + G+ + LPET N+P+ +T+ E Sbjct: 144 GSIVFGQLSDK-YGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQIALTLPGLIFMFYYW-IIPESARWLLLKGRKDCAIANMQKAARFN------KVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGL-----SLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLL-ICGSLTLVAGLLSLLLPETHNKPMLETIADGE 525
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: S22AL_MOUSE (Solute carrier family 22 member 21 OS=Mus musculus OX=10090 GN=Slc22a21 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.354e-44 Identity = 125/395 (31.65%), Postives = 198/395 (50.13%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMR---GVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGSLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLGGW---LPFGVFAFCGIAGGIFAFYLPETLNQPLYDTMTGIE 3254 G+ I G LSD GRK L + ++T F + FS N+ + L L G + AFVL TE + +R G+C F FA G ++L AY + WR L LA +LP +L L FI ESPRW + +GRIKEA ++ A NG P + + L+ K + + D++R+P R +++++ SV Y+GLSL+ N+ NIY+N L A E PA+++ LLL V R+ G+L+ G + LV + + +V ++G FG+ Y+++++YT EL+PTVVRN +G ++ A+++G+IL+P V LG + LP+ + I I + PE+ L +T+ ++ Sbjct: 156 GSFISGQLSDR-FGRKNILFLTMAMHTGFSFIQVFSVNFEMFTLLYTLVGMGHISNYVAAFVLGTEMLSKSVRIIFATLGVCIF--FAFGFMVLPLFAYFIREWRRLLLAITLPGVLCGALWW-FIPESPRWLISQGRIKEAEVIIRKAAKINGIVAPSTIFDPSETNK----------------LQDDSSKKPQSHHIYDLVRTPNIRILTIMSIILWLTISVGYFGLSLDTPNLNGNIYVNCFLLAAVEVPAYVLAWLLLQHVSRRYSMAGSLFLGGSVLLLVQLVPSDLHYLSTTLV--MVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRRLPYILMGSLTILTAIITLFFPESSGVSLPETIDEMQ 528
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Match: S22A6_PIG (Solute carrier family 22 member 6 OS=Sus scrofa OX=9823 GN=SLC22A6 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 1.894e-44 Identity = 123/394 (31.22%), Postives = 197/394 (50.00%), Query Frame = 3 Query: 2088 GAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVXXXXXXXXXXXXXXXXXXXXXQAYLEQVKDKDAVTGSLLDVIRSPLTRTRLFLAV-VINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAP---MMVVLGGWLPFGVFAFCGIAGGIFAFYLPETLNQPLYDTMTGIEG 3257 GA IFG+L++ LGR+ LI+ + + GT +F+PN+ Y FRLL+G S G+ L L E + + R G Y ++ G +LAG+AY WR+L + S+P F + FI ES RWY GR+ + + +A NG S S + +A L + D S ++++R P+ R RLFL + ++ F S YYGL +++ +IYL V+ + PA LV L+++ +GR+P + +L +G I +V V+ +LG +A ++N +F+YT EL+PT++R LG + A++G+I++P M L +P ++ +A LPETL QPL DT+ +E Sbjct: 148 GAMIFGYLANR-LGRRKVLILNYLQTAVSGTCAAFAPNFPVYCAFRLLSGMSLAGISLSCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYAVPRWRHLQMLVSVPFFAFFIYSWFFI-ESARWYSSSGRLDLTLKALQRVAWINGKR---------------EEGASLSMEVLRASLNKELTMDKGQASAMELLRCPVLR-RLFLCLSLLWFATSFAYYGLVMDLQGFGVSIYLIQVIFGAVDLPAKLVGFLVINTMGRRPAQMASLLLAGICILINGVVPQDQ--SIVRTALAVLGKGCLAASFNCIFLYTGELYPTMIRQTGLGMGSTLARVGSIVSPLVSMTAELYPSMPLFIYGAVPVAASAATALLPETLGQPLPDTVQDVES 521 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01113 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01113_La_Tanjil_v1.0 ID=rna-TanjilR_01113_La_Tanjil_v1.0; Name=rna-TanjilR_01113; organism=Lupinus angustifolius; type=mRNA; length=3260bpback to top protein sequence of rna-TanjilR_01113_La_Tanjil_v1.0 >rna-TanjilR_01113_La_Tanjil_v1.0 ID=rna-TanjilR_01113_La_Tanjil_v1.0; Name=rna-TanjilR_01113_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=534bpback to top mRNA from alignment at Chr_LG13-CM007373.1:4308855..4312114+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01113_La_Tanjil_v1.0 ID=rna-TanjilR_01113_La_Tanjil_v1.0; Name=rna-TanjilR_01113; organism=Lupinus angustifolius; type=mRNA; length=3260bp; location=Sequence derived from: Chr_LG13-CM007373.1:4308855..4312114+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG13-CM007373.1:4308855..4312114+ >rna-TanjilR_01113_La_Tanjil_v1.0 ID=rna-TanjilR_01113_La_Tanjil_v1.0; Name=rna-TanjilR_01113; organism=Lupinus angustifolius; type=CDS; length=1605bp; location=Sequence derived from: Chr_LG13-CM007373.1:4308855..4312114+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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