rna-TanjilR_28909

Transcript Overview
Namerna-TanjilR_28909
Unique Namerna-TanjilR_28909_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length4374
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG15-CM007375.1supercontigChr_LG15-CM007375.1:5370046..5374419 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananR299Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaR0394Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0483Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0462Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0335Pisum sativum Cameor genome v1aPisum sativum
anpvR0424Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0456Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0375Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0406Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0413Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0424Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0378Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0386Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0386Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0365Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0357Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0425Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0354Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0393Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0400Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0405Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0388Cicer arietinum
anccaR0335Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0343Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0417Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0400Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0408Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0409Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0427Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0427Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anpvfR0437Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0356Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0470Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_28909gene-TanjilG_28909_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28909rna-TanjilR_28909_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_28909_La_Tanjil_v1.0rna-TanjilR_28909_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370046..5370320rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370046..5370320Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370452..5370560rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370452..5370560Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5371768..5371833rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5371768..5371833Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372003..5372091rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372003..5372091Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372611..5372698rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372611..5372698Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372847..5372993rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372847..5372993Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373103..5373195rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373103..5373195Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373563..5373664rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373563..5373664Lupinus angustifoliusexon
rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373934..5374419rna-TanjilR_28909_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373934..5374419Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370046..5370320rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370046..5370320Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370452..5370560rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5370452..5370560Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5371768..5371833rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5371768..5371833Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372003..5372091rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372003..5372091Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372611..5372698rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372611..5372698Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372847..5372993rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5372847..5372993Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373103..5373195rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373103..5373195Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373563..5373664rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373563..5373664Lupinus angustifoliusCDS
rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373934..5374419rna-TanjilR_28909_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:5373934..5374419Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_28909 vs. DB:Swiss
Match: IQM3_ARATH (IQ domain-containing protein IQM3 OS=Arabidopsis thaliana OX=3702 GN=IQM3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.198e-27
Identity = 58/84 (69.05%), Postives = 65/84 (77.38%), Query Frame = 1 
Query: 4063 YQRTLSGGLQSPRAEVPKTAILQRINSKKSTNSYQLGHNLSRKWSTGAGPRIGCVADYPVELRLQALEIVNLSPRTHPSPSSDT 4314
            YQRTLSGGL SP+A VP+ ++L RINSKK + S QLGH LS KWSTG GPRIGC ADYPV+LR QALE VNLSP+   S  S T
Sbjct:  368 YQRTLSGGLGSPKANVPQKSMLLRINSKKQSRSLQLGHQLSLKWSTGVGPRIGCAADYPVQLRTQALEFVNLSPKYRSSRLSPT 451

HSP 2 Score: 74.7146 bits (182), Expect = 2.708e-12
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 
Query: 2790 FLNQQEREHYEYIVCEGNIIHKHSGDVLHTKEGSEDAKWIFVMSTSKKLYAGKVTIQAKFLFIVSCFL 2993
            +L  QERE YEY++ EG I+HK +G  LHT  GSE  KWIFVMST KKLYAG   ++ K  F  S FL
Sbjct:  193 YLGPQEREEYEYVIIEGKIVHKLTGKFLHTMHGSEGTKWIFVMSTFKKLYAG---LKKKGRFHHSSFL 257

HSP 3 Score: 67.781 bits (164), Expect = 4.319e-10
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 2 
Query: 1958 IDPRHRYGHNLHYYYEEWCKADADEPFFYW*D 2053
            IDPRHRYGHNLH YYEEWCKADA +PFFYW D
Sbjct:  138 IDPRHRYGHNLHKYYEEWCKADAGQPFFYWLD 169

HSP 4 Score: 66.6254 bits (161), Expect = 9.711e-10
Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = 3 
Query:  408 WQAIDFVRLNHSTISFFNL--PETAASRWARVKLNASKVSLSLSI 536
            WQA+D+ RLNHSTISFF+   PETA SRW RV LNASKV   LSI
Sbjct:   78 WQAMDYARLNHSTISFFDYSRPETAVSRWNRVSLNASKVGKGLSI 122
[Close]
BLAST of rna-TanjilR_28909 vs. DB:Swiss
Match: IQM2_ARATH (IQ domain-containing protein IQM2 OS=Arabidopsis thaliana OX=3702 GN=IQM2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.164e-18
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 1 
Query: 4102 AEVPKTAILQRINSKKSTNSYQLGHNLSRKWSTGAGPRIGCVADYPVELRLQALEIVNLSPRT 4290
             ++ + +IL+RINSKK T S+QLG  LS KW+TGAGPRIGCV DYP EL+ QALE VNLSPR+
Sbjct:  506 VKITEESILKRINSKKETKSFQLGKQLSCKWTTGAGPRIGCVRDYPSELQFQALEQVNLSPRS 568
[Close]
BLAST of rna-TanjilR_28909 vs. DB:Swiss
Match: IQM6_ARATH (IQ domain-containing protein IQM6 OS=Arabidopsis thaliana OX=3702 GN=IQM6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.213e-13
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 1 
Query: 3982 SEYGIFEEAENTLSSDKEDLQPQSVGCYQRTLSGGLQSPRAEVPKTAILQRINSKKSTNSYQLGHNLSRKWSTGAGPRIGCVADYPVELRLQALEIVNLSPR 4287
            SE G +E AE T  +++E   P+S           ++     V K  I++RI+S K   SYQL   L  +WSTGAGPRI C+ DYP EL+ + LE  +LSPR
Sbjct:  447 SEQG-YETAEETFIAEEEFTYPKS-----NLFDEDIEDYEKPVLKEKIMRRIDSHKGIKSYQLAERLHSRWSTGAGPRISCMRDYPSELQFRVLEQAHLSPR 542

HSP 2 Score: 64.3142 bits (155), Expect = 5.859e-9
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 3 
Query: 2790 FLNQQEREHYEYIVCEGNIIHKHSGDVLHTKEGSEDAKWIFVMSTSKKLYAGKVTIQAKFLFIVSCFL 2993
            +L   ERE YE I+ +G +++K SG VL TKEG  DAKWIFV+S SK LY G   ++ K  F  S FL
Sbjct:  242 YLGPTEREAYEVIIEDGKLMYKQSGIVLDTKEGPPDAKWIFVLSVSKILYVG---MKKKGNFQHSSFL 306
[Close]
BLAST of rna-TanjilR_28909 vs. DB:Swiss
Match: IQM1_ARATH (IQ domain-containing protein IQM1 OS=Arabidopsis thaliana OX=3702 GN=IQM1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.253e-10
Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 1 
Query: 4180 LSRKWSTGAGPRIGCVADYPVELRLQALEIVNLSPRTHPS----------PSSDTRMNGLISPIGCPTPKA 4362
            LS KW++G GPRIGCV DYP+EL+ QALE V+LSPR  P+          PS   R++  ++ +G P+P+A
Sbjct:  415 LSCKWTSGYGPRIGCVRDYPMELQAQALEQVSLSPRVSPANSYGPIPSPRPSPKVRVSPRLAYMGIPSPRA 485
[Close]
BLAST of rna-TanjilR_28909 vs. DB:Swiss
Match: IQM4_ARATH (IQ domain-containing protein IQM4 OS=Arabidopsis thaliana OX=3702 GN=IQM4 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.679e-9
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 1 
Query: 4162 YQLGHNLSRKWSTGAGPRIGCVADYPVELRLQALEIVNLSPRT------HPSP---------SSDTRMNGLISPIGCPTPKAYV 4368
            +QL   LS KW++G GPRIGCV DYP+EL+ QA E V+LSPR        PSP         S   R++  ++ +G P+P+  V
Sbjct:  447 FQLAKRLSCKWNSGVGPRIGCVRDYPMELQSQAFEQVSLSPRISPGSTRFPSPYGPIPSPRPSPRVRVSPRLAYMGIPSPRVQV 530
[Close]
BLAST of rna-TanjilR_28909 vs. DB:Swiss
Match: IQM5_ARATH (IQ domain-containing protein IQM5 OS=Arabidopsis thaliana OX=3702 GN=IQM5 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.285e-9
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 1 
Query: 4180 LSRKWSTGAGPRIGCVADYPVELRLQALEIVNLSPRT------------HPSPSSDTRMNGLISPIGCPTPK 4359
             S KWSTG GPRIGCV DYP++L+ +ALE VNLSPR              P PS   R++  +S +G P+P+
Sbjct:  423 FSCKWSTGNGPRIGCVRDYPMDLQTRALEQVNLSPRVVNGTMGLFGPIPSPRPSPKIRVSPRLSCMGLPSPR 494
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_28909 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
IQM3_ARATH2.198e-2769.05IQ domain-containing protein IQM3 OS=Arabidopsis t... [more]
IQM2_ARATH6.164e-1866.67IQ domain-containing protein IQM2 OS=Arabidopsis t... [more]
IQM6_ARATH6.213e-1342.16IQ domain-containing protein IQM6 OS=Arabidopsis t... [more]
IQM1_ARATH3.253e-1047.89IQ domain-containing protein IQM1 OS=Arabidopsis t... [more]
IQM4_ARATH1.679e-942.86IQ domain-containing protein IQM4 OS=Arabidopsis t... [more]
IQM5_ARATH2.285e-947.22IQ domain-containing protein IQM5 OS=Arabidopsis t... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 61..90
score: 7.291

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_28909_La_Tanjil_v1.0 ID=rna-TanjilR_28909_La_Tanjil_v1.0; Name=rna-TanjilR_28909; organism=Lupinus angustifolius; type=mRNA; length=4374bp
atgGGGGTTCATACTCAAACACTCTCTACCTTTGACCTTAACTCTAACCC
CTCATTCCCATATTCCACTGTTAACGGCATTCACCACCCGCTCCCAACTT
CCCCTCTCACCAACGATCAGCCTCTTAAAACCCCAAATGTCGAATTGCCG
GAGTGCCACGCGCCGTCACGCGCGTGGCATGAGGACACCGCTGCCCTCAG
GGTGCAGAAGGTCTACCGTAGTTACCGTACCAGGCGGAGGTTGGCTGATT
CCGCCGTCCTCGCCGAGGAGTTATGGTGCGTCGGTCTTTGTTTGCATGGA
AACCAAACACTTTCTTCCtctctttattatattgttatttttttaataat
attatttatgattattttaataattgaaaagGTGTGGTTAAATTTCATTT
ATGAAGGTGGCAGGCGATAGATTTTGTGAGGCTAAACCATAGCACCATTT
CCTTCTTCAATTTGCCGGAGACCGCAGCTTCACGCTGGGCTCGCGTTAAA
CTCAACGCTTCCAAggtttctctttctctctctattttttTCCCGCAACA
CATGTTACTATCTCGAGTTAGGATCTCTCTATTACAAGTACAACTTTCAA
TGACATATAATTACATTTAAATTACACTTTTGCCATTCAAAATGAAGATA
TAAAGATACACTTGTCTTTTGTTTCTTCCTTAATGGAGAGAATCTTTATT
CTATCATCTCTGTTCGGTCCAGTACTAACGCCTCTGGTACTCTAGATTCA
TACAGTATATAAACTGCACGTTATATGGTTACTATACGATTCTTTGTAAA
TTGTACGTTTTGGTGAATTCTGTGTTCTTACCGACAAATAATAGATTTTA
CAACCGCTgtattgtcatttattttataccccattttttttcatttcccc
GCTTCATATCTTAATGATGTGATTTGTGTATAGATCAAGTGGATCAGTGG
TTAATCAAGTTTATTGGATTATTAATACTAACTGAATATACATGTTTGCA
AGTTGGTTATCGAGGAGGGAAAGGGAAATGGAAGCTAGGAGGAACtgtat
ttcataatttttcttcCATTTCCTTCAAAAATTAACTCCCAAACTTACCT
CAAGGCTGTGTTTGGTGAGGGTGAAAAGTGAATGGAATGAAAAAAAGGAA
GCAAAAGATTCTTTTTCATAGTTTGGTTGCATTcaataaagggaagaaaa
acaaaaaaatggttGGTGGGTCATGCCTttatgttttctctctaatATTG
GGAGGAAAACTCAAGTGGAGAAAattagggacaaattttatcgtcaataa
tttcatatacatttaaaaaattcgTATTTTGTATTCGTCATATTTATAAA
TGTATCTGATTTCCtaaaattacaaagaaaacaaacacaTGCATGTCAAT
GTCATTATgagtaataattatattattttctctcaactttctattcattt
tctacCCTACCAAACAACTACaaaatcatcatattttctACTTATTTTCT
ATTCTCAACTTTTTTTCCTCGACCTTTCTTCCTAAAAATTATTTGTACAA
TTTTTGTTTGTGAATTCAATCAAaatctatttataatttttatttctacc
cCATTTTTTTTATCACCACATATAAAAATGGGCACGAGTGTGTGATATAA
TTGGTTATGATTATTAGGAAAAAGGATGacttttgcatttgattctgaag
CTAATATGGAATGTTTTGGCAGGTGGGTAAGGGTTTGTCTGTTGAAGCCA
AAGCACAAAAGTTGGCTTTTCAACATTGGATTGAAGCTGTGAGTATAAAG
TTCTTGATCAAACAATCCAAATCCTtctgttttatttctttatttattat
tgctTTTGAGTTTGCTATGTTTGATAAATTCATCCtaaattttatgttta
gaaaaataactcatccatttttatcTCAAGTTTAATTGTTACTATCTTGA
ACTGTAGATTGATCCACGCCACCGCTACGGGCATAACTTGCATTACTACT
ACGAGGAATGGTGTAAAGCGGATGCTGACGAACCATTCTTTTATTGGTGA
GACTAATTTACTTTAACAAAGCGTTTCTTTCACCCCTTTGAAAATCTTGG
GCTAAAATTGAAGTGGATTGGGTGCGGTTGGGTGTGATTTAAGTAGGCAG
TGTGCAAGTAAGTGAAGTTCTGTTTTCTAATGCTGTTGATACTGTCTGAT
TCCATTGAATTAACAGGGAAATATGGCTTGTACAGTTTACTGTGCACACT
TGTACAGTTCAGCATCTGATTCCCGTTAGTGATTAAGTGCATATCCTTTT
GCATTTGATCTGTTTTTGGGATTAATGCTTATACCCTCTAACCCATAAAT
GCTCCCCTGATTTTCCCaaaattctcttaaaaaaattggATTATGGATTA
GTTATATATGATGGTGATTTTTAAGTTTGCTTCCTACCTTCTGTTTTAAC
AAAAAGTGCAGCCTGTCTTACAAGGCCAAGGCATAGAGTAAGAGTTTATG
ATGCTAAGATAAGAAAGTGCagcttcttttcttttgttacTGAAATATGT
TTTCTCATTTTACAGGTTGGATTTAGGAAAAGGGAAAAATcttgatcttg
aaaaatgtcCCCGATCAAAGCTCCGGAAACAATGCATTAAATATCTTGGA
CCTGTATGTAAATCtgctttttgatttttttcctttttttgttattttag
ttgacttagaCTATATTGGGTTGTTCTAAAATATTTCGAAAGTTATGGAA
TTTTCCTGCTTTTCTTACCTGTTAGTGtttcttaatattttcttaaatca
gCAAGAGAGAGAGCACTATGAATATATTGTCTGCGAGGGAAATATTATCC
ACAAGCATTCAGGAGATGTTCTCCATACGAAGGAAGGTTCTGAAGATGCC
AAGTGGATTTTTGTAATGAGCACCTCTAAGAAACTGTATGCTGGGAAGGT
AACAATTCAAGCTAAGTTCTTGTTTATAGTTTCCTGTTTTCTCATATATG
TGCATGATCTCCACTATTTCTTTCCCGCCTTACTGATACATTGTAATAAC
CTCCCAGAAAAAGAAGGGATCATTCCATCATTCTTCGTTTTTAGCTGGCG
GAGCTACCTTAGCTGCTGGAAGGCTGGAGGCTGAACATGGGATTCTGAAG
GTAAAATTAACTTCGGAAGTTGCATGATTAAATTTGGAAAAAGGCTTCTC
TAAAGTGAGAGTAAGAGTGTATGTACCCATGATTTAACTTAAGGTGCAAC
ATGACTATACCATACTAAAATTTAATAGTGGATGCATCCTTGCTCACTTT
AGAGGCAAGCTCATTTTAAAGGAGTCCTAGCCAATAAATTGTTGTGCTAA
TGGCACCTAACTTTAGGTGGTCCTAATCCTACCAGCATTAATAGTCTCAC
AGATAGTGGGCTTCTGTCTTTTAGTACACGGATTAAATGACATTGTTAGA
CATATTTTCTAATTCCAATTTATATGCTTTGACAAATGTCTGATTCTCAA
TGGCTTTGACTTTTCAGTCCATCTCTGCATACAGTGGACACTACCGGCCA
TCAGACGACTCTCTTGACAGTTTCTTATCATATCTCAAGGAAAATGGTGT
CCAGCTTGATGAAGTCGAGGTAAACTGGTACTAGTGGTTAGCATCAGAAC
ATTTCATGTGCAGAAAAACCCTTTTCTAGAACAATTTTATgccaaaatat
gttttttttcttgaaGATCTTGATACTTTATGAACTGATTGGTTGCCTCT
GTTGTTGATTCAATCtttattatcataatttatttgctACACTTAAAAGT
TTGGTCTTGCATTTCCAAATGATGTTTATGGTCATAGGCTCATAGCTGGA
ACATGtaatatttaattgaaataaCTCTGATTTTTCAGATATGCAGCGCA
AAAGATGACACTGATATGTATGAGAATGGCAAGCTTACTGAAAAAGATAC
AGCATCTGAAGTGTCAATGACTGCTAAAATGTCCGAGTATGGAATATTCG
AGGAAGCTGAGAATACCCTATCCTCAGACAAGGAAGATCTTCAACCTCAA
TCTGTTGGTTGTTATCAAAGGACACTATCAGGTGGTCTTCAGAGCCCAAG
AGCTGAGGTTCCCAAGACTGCTATATTGCAAAGAATCAATTCCAAGAAGA
GTACAAATTCGTACCAACTCGGACATAACCTTTCCCGTAAATGGTCAACA
GGAGCCGGACCGAGAATTGGATGTGTTGCTGACTACCCTGTAGAGCTTAG
ACTACAGGCCTTGGAGATAGTCAACCTTTCTCCAAGGACCCATCCCTCCC
CATCATCAGACACGCGAATGAATGGTCTTATATCACCTATAGGTTGTCCA
ACTCCCAAGGCTTATGTTATTTGA
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protein sequence of rna-TanjilR_28909_La_Tanjil_v1.0

>rna-TanjilR_28909_La_Tanjil_v1.0 ID=rna-TanjilR_28909_La_Tanjil_v1.0; Name=rna-TanjilR_28909_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=484bp
MGVHTQTLSTFDLNSNPSFPYSTVNGIHHPLPTSPLTNDQPLKTPNVELP
ECHAPSRAWHEDTAALRVQKVYRSYRTRRRLADSAVLAEELWWQAIDFVR
LNHSTISFFNLPETAASRWARVKLNASKVGKGLSVEAKAQKLAFQHWIEA
IDPRHRYGHNLHYYYEEWCKADADEPFFYWLDLGKGKNLDLEKCPRSKLR
KQCIKYLGPQEREHYEYIVCEGNIIHKHSGDVLHTKEGSEDAKWIFVMST
SKKLYAGKKKKGSFHHSSFLAGGATLAAGRLEAEHGILKSISAYSGHYRP
SDDSLDSFLSYLKENGVQLDEVEICSAKDDTDMYENGKLTEKDTASEVSM
TAKMSEYGIFEEAENTLSSDKEDLQPQSVGCYQRTLSGGLQSPRAEVPKT
AILQRINSKKSTNSYQLGHNLSRKWSTGAGPRIGCVADYPVELRLQALEI
VNLSPRTHPSPSSDTRMNGLISPIGCPTPKAYVI
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mRNA from alignment at Chr_LG15-CM007375.1:5370046..5374419+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_28909_La_Tanjil_v1.0 ID=rna-TanjilR_28909_La_Tanjil_v1.0; Name=rna-TanjilR_28909; organism=Lupinus angustifolius; type=mRNA; length=4374bp; location=Sequence derived from: Chr_LG15-CM007375.1:5370046..5374419+ (Lupinus angustifolius
atgGGGGTTCATACTCAAACACTCTCTACCTTTGACCTTAACTCTAACCC
CTCATTCCCATATTCCACTGTTAACGGCATTCACCACCCGCTCCCAACTT
CCCCTCTCACCAACGATCAGCCTCTTAAAACCCCAAATGTCGAATTGCCG
GAGTGCCACGCGCCGTCACGCGCGTGGCATGAGGACACCGCTGCCCTCAG
GGTGCAGAAGGTCTACCGTAGTTACCGTACCAGGCGGAGGTTGGCTGATT
CCGCCGTCCTCGCCGAGGAGTTATGGTGCGTCGGTCTTTGTTTGCATGGA
AACCAAACACTTTCTTCCtctctttattatattgttatttttttaataat
attatttatgattattttaataattgaaaagGTGTGGTTAAATTTCATTT
ATGAAGGTGGCAGGCGATAGATTTTGTGAGGCTAAACCATAGCACCATTT
CCTTCTTCAATTTGCCGGAGACCGCAGCTTCACGCTGGGCTCGCGTTAAA
CTCAACGCTTCCAAggtttctctttctctctctattttttTCCCGCAACA
CATGTTACTATCTCGAGTTAGGATCTCTCTATTACAAGTACAACTTTCAA
TGACATATAATTACATTTAAATTACACTTTTGCCATTCAAAATGAAGATA
TAAAGATACACTTGTCTTTTGTTTCTTCCTTAATGGAGAGAATCTTTATT
CTATCATCTCTGTTCGGTCCAGTACTAACGCCTCTGGTACTCTAGATTCA
TACAGTATATAAACTGCACGTTATATGGTTACTATACGATTCTTTGTAAA
TTGTACGTTTTGGTGAATTCTGTGTTCTTACCGACAAATAATAGATTTTA
CAACCGCTgtattgtcatttattttataccccattttttttcatttcccc
GCTTCATATCTTAATGATGTGATTTGTGTATAGATCAAGTGGATCAGTGG
TTAATCAAGTTTATTGGATTATTAATACTAACTGAATATACATGTTTGCA
AGTTGGTTATCGAGGAGGGAAAGGGAAATGGAAGCTAGGAGGAACtgtat
ttcataatttttcttcCATTTCCTTCAAAAATTAACTCCCAAACTTACCT
CAAGGCTGTGTTTGGTGAGGGTGAAAAGTGAATGGAATGAAAAAAAGGAA
GCAAAAGATTCTTTTTCATAGTTTGGTTGCATTcaataaagggaagaaaa
acaaaaaaatggttGGTGGGTCATGCCTttatgttttctctctaatATTG
GGAGGAAAACTCAAGTGGAGAAAattagggacaaattttatcgtcaataa
tttcatatacatttaaaaaattcgTATTTTGTATTCGTCATATTTATAAA
TGTATCTGATTTCCtaaaattacaaagaaaacaaacacaTGCATGTCAAT
GTCATTATgagtaataattatattattttctctcaactttctattcattt
tctacCCTACCAAACAACTACaaaatcatcatattttctACTTATTTTCT
ATTCTCAACTTTTTTTCCTCGACCTTTCTTCCTAAAAATTATTTGTACAA
TTTTTGTTTGTGAATTCAATCAAaatctatttataatttttatttctacc
cCATTTTTTTTATCACCACATATAAAAATGGGCACGAGTGTGTGATATAA
TTGGTTATGATTATTAGGAAAAAGGATGacttttgcatttgattctgaag
CTAATATGGAATGTTTTGGCAGGTGGGTAAGGGTTTGTCTGTTGAAGCCA
AAGCACAAAAGTTGGCTTTTCAACATTGGATTGAAGCTGTGAGTATAAAG
TTCTTGATCAAACAATCCAAATCCTtctgttttatttctttatttattat
tgctTTTGAGTTTGCTATGTTTGATAAATTCATCCtaaattttatgttta
gaaaaataactcatccatttttatcTCAAGTTTAATTGTTACTATCTTGA
ACTGTAGATTGATCCACGCCACCGCTACGGGCATAACTTGCATTACTACT
ACGAGGAATGGTGTAAAGCGGATGCTGACGAACCATTCTTTTATTGGTGA
GACTAATTTACTTTAACAAAGCGTTTCTTTCACCCCTTTGAAAATCTTGG
GCTAAAATTGAAGTGGATTGGGTGCGGTTGGGTGTGATTTAAGTAGGCAG
TGTGCAAGTAAGTGAAGTTCTGTTTTCTAATGCTGTTGATACTGTCTGAT
TCCATTGAATTAACAGGGAAATATGGCTTGTACAGTTTACTGTGCACACT
TGTACAGTTCAGCATCTGATTCCCGTTAGTGATTAAGTGCATATCCTTTT
GCATTTGATCTGTTTTTGGGATTAATGCTTATACCCTCTAACCCATAAAT
GCTCCCCTGATTTTCCCaaaattctcttaaaaaaattggATTATGGATTA
GTTATATATGATGGTGATTTTTAAGTTTGCTTCCTACCTTCTGTTTTAAC
AAAAAGTGCAGCCTGTCTTACAAGGCCAAGGCATAGAGTAAGAGTTTATG
ATGCTAAGATAAGAAAGTGCagcttcttttcttttgttacTGAAATATGT
TTTCTCATTTTACAGGTTGGATTTAGGAAAAGGGAAAAATcttgatcttg
aaaaatgtcCCCGATCAAAGCTCCGGAAACAATGCATTAAATATCTTGGA
CCTGTATGTAAATCtgctttttgatttttttcctttttttgttattttag
ttgacttagaCTATATTGGGTTGTTCTAAAATATTTCGAAAGTTATGGAA
TTTTCCTGCTTTTCTTACCTGTTAGTGtttcttaatattttcttaaatca
gCAAGAGAGAGAGCACTATGAATATATTGTCTGCGAGGGAAATATTATCC
ACAAGCATTCAGGAGATGTTCTCCATACGAAGGAAGGTTCTGAAGATGCC
AAGTGGATTTTTGTAATGAGCACCTCTAAGAAACTGTATGCTGGGAAGGT
AACAATTCAAGCTAAGTTCTTGTTTATAGTTTCCTGTTTTCTCATATATG
TGCATGATCTCCACTATTTCTTTCCCGCCTTACTGATACATTGTAATAAC
CTCCCAGAAAAAGAAGGGATCATTCCATCATTCTTCGTTTTTAGCTGGCG
GAGCTACCTTAGCTGCTGGAAGGCTGGAGGCTGAACATGGGATTCTGAAG
GTAAAATTAACTTCGGAAGTTGCATGATTAAATTTGGAAAAAGGCTTCTC
TAAAGTGAGAGTAAGAGTGTATGTACCCATGATTTAACTTAAGGTGCAAC
ATGACTATACCATACTAAAATTTAATAGTGGATGCATCCTTGCTCACTTT
AGAGGCAAGCTCATTTTAAAGGAGTCCTAGCCAATAAATTGTTGTGCTAA
TGGCACCTAACTTTAGGTGGTCCTAATCCTACCAGCATTAATAGTCTCAC
AGATAGTGGGCTTCTGTCTTTTAGTACACGGATTAAATGACATTGTTAGA
CATATTTTCTAATTCCAATTTATATGCTTTGACAAATGTCTGATTCTCAA
TGGCTTTGACTTTTCAGTCCATCTCTGCATACAGTGGACACTACCGGCCA
TCAGACGACTCTCTTGACAGTTTCTTATCATATCTCAAGGAAAATGGTGT
CCAGCTTGATGAAGTCGAGGTAAACTGGTACTAGTGGTTAGCATCAGAAC
ATTTCATGTGCAGAAAAACCCTTTTCTAGAACAATTTTATgccaaaatat
gttttttttcttgaaGATCTTGATACTTTATGAACTGATTGGTTGCCTCT
GTTGTTGATTCAATCtttattatcataatttatttgctACACTTAAAAGT
TTGGTCTTGCATTTCCAAATGATGTTTATGGTCATAGGCTCATAGCTGGA
ACATGtaatatttaattgaaataaCTCTGATTTTTCAGATATGCAGCGCA
AAAGATGACACTGATATGTATGAGAATGGCAAGCTTACTGAAAAAGATAC
AGCATCTGAAGTGTCAATGACTGCTAAAATGTCCGAGTATGGAATATTCG
AGGAAGCTGAGAATACCCTATCCTCAGACAAGGAAGATCTTCAACCTCAA
TCTGTTGGTTGTTATCAAAGGACACTATCAGGTGGTCTTCAGAGCCCAAG
AGCTGAGGTTCCCAAGACTGCTATATTGCAAAGAATCAATTCCAAGAAGA
GTACAAATTCGTACCAACTCGGACATAACCTTTCCCGTAAATGGTCAACA
GGAGCCGGACCGAGAATTGGATGTGTTGCTGACTACCCTGTAGAGCTTAG
ACTACAGGCCTTGGAGATAGTCAACCTTTCTCCAAGGACCCATCCCTCCC
CATCATCAGACACGCGAATGAATGGTCTTATATCACCTATAGGTTGTCCA
ACTCCCAAGGCTTATGTTATTTGA
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Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:5370046..5374419+

>rna-TanjilR_28909_La_Tanjil_v1.0 ID=rna-TanjilR_28909_La_Tanjil_v1.0; Name=rna-TanjilR_28909; organism=Lupinus angustifolius; type=CDS; length=1455bp; location=Sequence derived from: Chr_LG15-CM007375.1:5370046..5374419+ (Lupinus angustifolius
atgGGGGTTCATACTCAAACACTCTCTACCTTTGACCTTAACTCTAACCC
CTCATTCCCATATTCCACTGTTAACGGCATTCACCACCCGCTCCCAACTT
CCCCTCTCACCAACGATCAGCCTCTTAAAACCCCAAATGTCGAATTGCCG
GAGTGCCACGCGCCGTCACGCGCGTGGCATGAGGACACCGCTGCCCTCAG
GGTGCAGAAGGTCTACCGTAGTTACCGTACCAGGCGGAGGTTGGCTGATT
CCGCCGTCCTCGCCGAGGAGTTATGGTGGCAGGCGATAGATTTTGTGAGG
CTAAACCATAGCACCATTTCCTTCTTCAATTTGCCGGAGACCGCAGCTTC
ACGCTGGGCTCGCGTTAAACTCAACGCTTCCAAgGTGGGTAAGGGTTTGT
CTGTTGAAGCCAAAGCACAAAAGTTGGCTTTTCAACATTGGATTGAAGCT
ATTGATCCACGCCACCGCTACGGGCATAACTTGCATTACTACTACGAGGA
ATGGTGTAAAGCGGATGCTGACGAACCATTCTTTTATTGGTTGGATTTAG
GAAAAGGGAAAAATcttgatcttgaaaaatgtcCCCGATCAAAGCTCCGG
AAACAATGCATTAAATATCTTGGACCTCAAGAGAGAGAGCACTATGAATA
TATTGTCTGCGAGGGAAATATTATCCACAAGCATTCAGGAGATGTTCTCC
ATACGAAGGAAGGTTCTGAAGATGCCAAGTGGATTTTTGTAATGAGCACC
TCTAAGAAACTGTATGCTGGGAAGAAAAAGAAGGGATCATTCCATCATTC
TTCGTTTTTAGCTGGCGGAGCTACCTTAGCTGCTGGAAGGCTGGAGGCTG
AACATGGGATTCTGAAGTCCATCTCTGCATACAGTGGACACTACCGGCCA
TCAGACGACTCTCTTGACAGTTTCTTATCATATCTCAAGGAAAATGGTGT
CCAGCTTGATGAAGTCGAGATATGCAGCGCAAAAGATGACACTGATATGT
ATGAGAATGGCAAGCTTACTGAAAAAGATACAGCATCTGAAGTGTCAATG
ACTGCTAAAATGTCCGAGTATGGAATATTCGAGGAAGCTGAGAATACCCT
ATCCTCAGACAAGGAAGATCTTCAACCTCAATCTGTTGGTTGTTATCAAA
GGACACTATCAGGTGGTCTTCAGAGCCCAAGAGCTGAGGTTCCCAAGACT
GCTATATTGCAAAGAATCAATTCCAAGAAGAGTACAAATTCGTACCAACT
CGGACATAACCTTTCCCGTAAATGGTCAACAGGAGCCGGACCGAGAATTG
GATGTGTTGCTGACTACCCTGTAGAGCTTAGACTACAGGCCTTGGAGATA
GTCAACCTTTCTCCAAGGACCCATCCCTCCCCATCATCAGACACGCGAAT
GAATGGTCTTATATCACCTATAGGTTGTCCAACTCCCAAGGCTTATGTTA
TTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding