rna-TanjilR_09277

Transcript Overview
Namerna-TanjilR_09277
Unique Namerna-TanjilR_09277_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length3224
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG15-CM007375.1supercontigChr_LG15-CM007375.1:17848485..17851708 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL142Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL201Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL262Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR290Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaR0370Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0396Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0397Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0435Cajanus cajan Asha genome v1.0Cajanus cajan
anccR0469Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0423Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0439Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0441Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0475Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0319Pisum sativum Cameor genome v1aPisum sativum
anpvR0433Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0436Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0357Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0369Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0420Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0422Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0445Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0359Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0388Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0355Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0375Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0355Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0376Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0359Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0338Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0350Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0417Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0437Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0330Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0357Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0394Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0396Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0410Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0419Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0364Cicer arietinum
ancarR0381Cicer arietinum
anccaR0337Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0349Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0408Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0413Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0424Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0438Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0412Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0433Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0414Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0422Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0418Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0423Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0433Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0447Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0432Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0446Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anpvfR0418Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0337Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0350Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0447Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0451Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.008G176600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.03G112700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg34727.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.1g168240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat02G0222100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun08g103400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_11697.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_03G01253.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr08.1117Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun08g103400.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan07g196200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_04027.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr08.1796.1.62122c06Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004490324.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Va07G047430.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
XM_058891774.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_23765Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.1g214200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_005203Cajanus cajan Asha genome v1.0Cajanus cajan
Psat2g070120.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.03G178000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_09277gene-TanjilG_09277_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_09277rna-TanjilR_09277_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_09277_La_Tanjil_v1.0rna-TanjilR_09277_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17848485..17848526rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17848485..17848526Lupinus angustifoliusexon
rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17849614..17850138rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17849614..17850138Lupinus angustifoliusexon
rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850280..17850362rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850280..17850362Lupinus angustifoliusexon
rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850491..17850572rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850491..17850572Lupinus angustifoliusexon
rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17851655..17851708rna-TanjilR_09277_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17851655..17851708Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17848485..17848526rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17848485..17848526Lupinus angustifoliusCDS
rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17849614..17850138rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17849614..17850138Lupinus angustifoliusCDS
rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850280..17850362rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850280..17850362Lupinus angustifoliusCDS
rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850491..17850572rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17850491..17850572Lupinus angustifoliusCDS
rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17851655..17851708rna-TanjilR_09277_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:17851655..17851708Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_09277 vs. DB:Swiss
Match: CX6B1_ARATH (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 5.422e-10
Identity = 26/31 (83.87%), Postives = 30/31 (96.77%), Query Frame = 2 
Query: 1787 DFQIETAPADFRFPTTNQTRHCFTRYVEFHR 1879
            + ++ETAPADFRFPTTNQTRHCFTRYVE+HR
Sbjct:  116 EIKLETAPADFRFPTTNQTRHCFTRYVEYHR 146

HSP 2 Score: 62.7734 bits (151), Expect = 1.045e-9
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 1 
Query: 2005 RCVAAKGEDAPECDKFAKYYRSLCPGEWVSILSAHR 2112
            RCVAAKG+DAPECDKFAK+YRSLCP EWV   +  R
Sbjct:  146 RCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNEQR 181
[Close]
BLAST of rna-TanjilR_09277 vs. DB:Swiss
Match: CX6B2_ARATH (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 5.518e-10
Identity = 25/31 (80.65%), Postives = 30/31 (96.77%), Query Frame = 2 
Query: 1787 DFQIETAPADFRFPTTNQTRHCFTRYVEFHR 1879
            + +++TAPADFRFPTTNQTRHCFTRY+EFHR
Sbjct:    4 EIELKTAPADFRFPTTNQTRHCFTRYIEFHR 34

HSP 2 Score: 51.9878 bits (123), Expect = 3.592e-7
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 1 
Query: 2005 RCVAAKGEDAPECDKFAKYYRSLCPGEWVSILSAHR 2112
            RC  AKGE++ +C++FAKYYR+LCPGEWV   +  R
Sbjct:   34 RCTTAKGEESNDCERFAKYYRALCPGEWVDKWNEQR 69
[Close]
BLAST of rna-TanjilR_09277 vs. DB:Swiss
Match: CX6B3_ARATH (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 6.388e-10
Identity = 25/31 (80.65%), Postives = 30/31 (96.77%), Query Frame = 2 
Query: 1787 DFQIETAPADFRFPTTNQTRHCFTRYVEFHR 1879
            + +++TAPADFRFPTTNQTRHCFTRY+EFHR
Sbjct:    4 EIELKTAPADFRFPTTNQTRHCFTRYIEFHR 34

HSP 2 Score: 56.225 bits (134), Expect = 1.484e-8
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 1 
Query: 2005 RCVAAKGEDAPECDKFAKYYRSLCPGEWVSILSAHR 2112
            RC  AKGEDA EC++FAKYYR+LCPGEWV   +  R
Sbjct:   34 RCTTAKGEDANECERFAKYYRALCPGEWVDKWNEQR 69
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_09277 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
CX6B1_ARATH5.422e-1083.87Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis t... [more]
CX6B2_ARATH5.518e-1080.65Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis t... [more]
CX6B3_ARATH6.388e-1080.65Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis t... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036549Cytochrome c oxidase, subunit VIb superfamilyGENE3D1.10.10.140coord: 182..261
e-value: 7.5E-36
score: 124.4
IPR036549Cytochrome c oxidase, subunit VIb superfamilySUPERFAMILY47694Cytochrome c oxidase subunit hcoord: 188..260
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 198..257
e-value: 1.4E-16
score: 60.5
IPR003213Cytochrome c oxidase, subunit VIbCDDcd00926Cyt_c_Oxidase_VIbcoord: 186..260
e-value: 3.99481E-45
score: 144.373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..66
NoneNo IPR availablePROSITEPS51808CHCHcoord: 205..248
score: 13.071

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_09277_La_Tanjil_v1.0 ID=rna-TanjilR_09277_La_Tanjil_v1.0; Name=rna-TanjilR_09277; organism=Lupinus angustifolius; type=mRNA; length=3224bp
ATGGCTCAACCTGCTTCTGACAATTCTCCAACTCTAGCTGAGGTAACTTA
CTCTTCTTCACTCAACAACTCTTTATTTTCCCTTCTCTTTTCAACCTATA
ATACAATTTTAATCAGTATATTTGTAATATTCGCTTCAAAACATGTTTGg
atcttttttttcatttaatggATCAGTGAGGGTGTTTTCCTTATCGATTA
TAATTTTTGCCGTTTTATTCACCCCTTTCTCAAGttcctttcattttaga
gaGAAGGGTTGACTAAAAATTGTACATTTATTCAATCACTTAGCCAGCAT
TAGCTATGAGTTTGTTAGATTCAATTTGcactcaatttttttcttctgtt
tttgaCCTTTCTCTTTTGAATTCCCTACTTCATCAATTATATTATAACGT
AAATCTGAATTATGAGGCtgattacaaaaaaaactataccATAGCCATAA
AGTCAAATAACTTATGCTACATATGAATGCAAATTTCGATCTGGTTGCTC
CTCAAGATATTCTGGCCCAAAAGACTTTAATCTGCTTTCTTTACAATTGA
ACTTCAATCTGGCCAAATAACTCTTGCTAGAGTTGTTGTTTAGGACTGTA
TACCGTTGAATTAATACTGCATCTGCATCTATTGGTTGGGTACTTTGAAG
TCAATACCGTGTCTGCATTATCGTGGCATTTTTGCAACTTTTTCTTGTGC
TTAGTAGTTAGTCCTTTAACTGAATACATCACAGACAAGCCTGTTATCAA
TCAACATTGTGGATAAATAACTTCTATGCTCGACAAATGTCGTGTAAAAC
GGTCTAAAAGTACATGTCAATGATATTAGAATTCCTGATGGCTAGGAGTT
TGAAGGGGAAGGGGAGAGGAAGAAAGGATaaacttttcattttaaagTAA
TGATACACCTTATTTTCGATTTTTGCTATCATATAACTTTCCAATGGTTC
CTAATTGCTATTTATAAGAGTGAGTATTGTTTTGGTGAGTATGTTATAAa
catttcttcatcaaaatgtTCCCTTGTTATGATGTGTTGTACGCTTCCGT
ATTCCCATTCGAGAGATGTATTGGTGTCTTGTTATATGTGATGAGATAAA
TGTAGTGATAGATTTACATTGACTTGCAGCAATATTTTGTGAACGAGACA
CAGGAGAAAACAGATATCGCTGCAAAACATGCGGAAGTCAAAGAGGTTGA
AAACCCAAATGAGGCTGCTTCAGAGGAAGCTCCTGTTGAGGAAACTGTAG
ATGCTCCTGTTAAGGAACAGGAAACCGTAGAAGTTCCTGTTGTGGAAACC
GTAGAAGCTCCTGTTGCGGAAACCGTAGAAGCTCCTGTTTCGGAAACCAT
AGAAGCTCCTGTTTCGGAAACCGTAGAAGCTCCTGTTGCGGAAACCGTAG
AAGCTCCTGTTGCAGAAACCGTAGAAGCTCCTGTTGTGGAAACCGTTGAA
GCTGCTGTTGAGAAAACTGTGGAAGCAACCCCCACAGTTGTTGAGGAAAG
CAGTGAAGCCACCCTTCCAGCTGAACAAAGCACTGATCCCACATCTAACA
CTCCCGAAGTGATCAATGAAGCAACGATAGAGCAAAGTAGTGGGAATACT
GCAGAAGAAAATGCTGGTGATCAAGTTGCAGCAGAAGAGACACCCGGAAT
TAAGGTTTTTTAATTAACTACTTATCATTCTTTagtatacttttttatat
ttttcggtacataatagttaattaattacatcATAAGCAtgtttcttctt
tgtttttgtgtttaacGTGTTCATATTTGTGCTATTGATTTTCAGATTGA
GACTGCTCCTGCAGATTTCCGCTTTCCAACGACAAATCAAACCAGGCATT
GCTTTACCCGATACGTTGAATTTCATCGGTGAGCCATACAAAAATGTCGT
TTCATTAAGCTTGTTACTTTCACAATCTGGAAAATTAcgttatcttttta
ttttaacctTCAAATTCTCAAGGCTTGACTGTTGCTGTCTTTAAATTCTC
ATGTAGATGTGTAGCCGCAAAGGGAGAAGATGCTCCTGAATGCGACAAGT
TTGCAAAATATTATCGTTCTCTTTGCCCTGGTGAATGGGTAAGTATTTTG
AGTGCACATAGAATATTGTTGGTTGTTTCCTAATACGAAGAATTAGGATC
CATTTGTCCATCTAATTGGTTATTGACATTTCTTTTTGCAAAAATGGTTG
TGCCCATATATCTATTCAAGTATGACCTTATTAGAGTCTGGACATTTAAA
TGGAGTTGCATCTTTTATTCCTTTGGTATAAATATGGTTgtggtgaatga
tatattgtggtCAGTATTCCCACATTTGAATAGATGCATAGTACTTTGGA
CATTGACAGtttaaacttttaattgatTTCTGTGAACTCAGCTCAATATC
ATCTTTAACGTGGGATCATGGTCTATAGCCCGTCAACTTTTGTGGCTATA
CAACTTGGATTGGGTTTATTCTTTGAGATGTAGAATTATCGTTATGAAAT
AAACTGTGCTTGTCATCTAACCAAGCAATTCCATAAAATTCTACttattt
caaaatgaagattttcatATGGAATTGCTTTGCTAAAGTAACAGGCGTTT
TATATGGATTGGATTTTTGAAGCATTTTATATGGTTTTATAGTTTGTAAA
ACTTCATTGGACATCATCAATGTCTGAGAATTCATGCATGCAGTATACAG
TGGTTTGTGCTACcttttataattatatactgCTGACATCAAACTCTACT
TTGAGTTGAAGATCTTTAACCTTGTTCAGAAATTGACCAAAAAAGtgaat
ttcattttcatgtCTTTAGAGTTCAACACCCATATTATGCTCAATATGTA
GAGCAACTGAGCAAGTCCAATTATTTTAAATGGATGTCTGCTGATTATTT
TCTCCTTAGCAGTTGCCATCAAATGAAATACATATGTACAATATTGTTAT
TGTCTTGCCAATTTTTCTCAAAGGCTTATTTATTTAGTACATTTTAAGGA
AACTTAAATCTCTACCTGACATTATGTTGTAGGAGCTTTTTTGCGCTATT
GTCTGAAAATTCCATGCAGCCGACCCCACCTAATAGCATAAAGGCTTGAT
CTTTGTCTACTATCTGAAAGTTACATCCATGAACTAACAGTCTGTTATTA
TGCATTTGTCTGTGCACCAGGTTGACAGATGGAATGAGCAAAGGGAGAAC
GGAACATTCCCCGGACCGCTGTAG
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protein sequence of rna-TanjilR_09277_La_Tanjil_v1.0

>rna-TanjilR_09277_La_Tanjil_v1.0 ID=rna-TanjilR_09277_La_Tanjil_v1.0; Name=rna-TanjilR_09277_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=261bp
MAQPASDNSPTLAEQYFVNETQEKTDIAAKHAEVKEVENPNEAASEEAPV
EETVDAPVKEQETVEVPVVETVEAPVAETVEAPVSETIEAPVSETVEAPV
AETVEAPVAETVEAPVVETVEAAVEKTVEATPTVVEESSEATLPAEQSTD
PTSNTPEVINEATIEQSSGNTAEENAGDQVAAEETPGIKIETAPADFRFP
TTNQTRHCFTRYVEFHRCVAAKGEDAPECDKFAKYYRSLCPGEWVDRWNE
QRENGTFPGPL
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mRNA from alignment at Chr_LG15-CM007375.1:17848485..17851708+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_09277_La_Tanjil_v1.0 ID=rna-TanjilR_09277_La_Tanjil_v1.0; Name=rna-TanjilR_09277; organism=Lupinus angustifolius; type=mRNA; length=3224bp; location=Sequence derived from: Chr_LG15-CM007375.1:17848485..17851708+ (Lupinus angustifolius
ATGGCTCAACCTGCTTCTGACAATTCTCCAACTCTAGCTGAGGTAACTTA
CTCTTCTTCACTCAACAACTCTTTATTTTCCCTTCTCTTTTCAACCTATA
ATACAATTTTAATCAGTATATTTGTAATATTCGCTTCAAAACATGTTTGg
atcttttttttcatttaatggATCAGTGAGGGTGTTTTCCTTATCGATTA
TAATTTTTGCCGTTTTATTCACCCCTTTCTCAAGttcctttcattttaga
gaGAAGGGTTGACTAAAAATTGTACATTTATTCAATCACTTAGCCAGCAT
TAGCTATGAGTTTGTTAGATTCAATTTGcactcaatttttttcttctgtt
tttgaCCTTTCTCTTTTGAATTCCCTACTTCATCAATTATATTATAACGT
AAATCTGAATTATGAGGCtgattacaaaaaaaactataccATAGCCATAA
AGTCAAATAACTTATGCTACATATGAATGCAAATTTCGATCTGGTTGCTC
CTCAAGATATTCTGGCCCAAAAGACTTTAATCTGCTTTCTTTACAATTGA
ACTTCAATCTGGCCAAATAACTCTTGCTAGAGTTGTTGTTTAGGACTGTA
TACCGTTGAATTAATACTGCATCTGCATCTATTGGTTGGGTACTTTGAAG
TCAATACCGTGTCTGCATTATCGTGGCATTTTTGCAACTTTTTCTTGTGC
TTAGTAGTTAGTCCTTTAACTGAATACATCACAGACAAGCCTGTTATCAA
TCAACATTGTGGATAAATAACTTCTATGCTCGACAAATGTCGTGTAAAAC
GGTCTAAAAGTACATGTCAATGATATTAGAATTCCTGATGGCTAGGAGTT
TGAAGGGGAAGGGGAGAGGAAGAAAGGATaaacttttcattttaaagTAA
TGATACACCTTATTTTCGATTTTTGCTATCATATAACTTTCCAATGGTTC
CTAATTGCTATTTATAAGAGTGAGTATTGTTTTGGTGAGTATGTTATAAa
catttcttcatcaaaatgtTCCCTTGTTATGATGTGTTGTACGCTTCCGT
ATTCCCATTCGAGAGATGTATTGGTGTCTTGTTATATGTGATGAGATAAA
TGTAGTGATAGATTTACATTGACTTGCAGCAATATTTTGTGAACGAGACA
CAGGAGAAAACAGATATCGCTGCAAAACATGCGGAAGTCAAAGAGGTTGA
AAACCCAAATGAGGCTGCTTCAGAGGAAGCTCCTGTTGAGGAAACTGTAG
ATGCTCCTGTTAAGGAACAGGAAACCGTAGAAGTTCCTGTTGTGGAAACC
GTAGAAGCTCCTGTTGCGGAAACCGTAGAAGCTCCTGTTTCGGAAACCAT
AGAAGCTCCTGTTTCGGAAACCGTAGAAGCTCCTGTTGCGGAAACCGTAG
AAGCTCCTGTTGCAGAAACCGTAGAAGCTCCTGTTGTGGAAACCGTTGAA
GCTGCTGTTGAGAAAACTGTGGAAGCAACCCCCACAGTTGTTGAGGAAAG
CAGTGAAGCCACCCTTCCAGCTGAACAAAGCACTGATCCCACATCTAACA
CTCCCGAAGTGATCAATGAAGCAACGATAGAGCAAAGTAGTGGGAATACT
GCAGAAGAAAATGCTGGTGATCAAGTTGCAGCAGAAGAGACACCCGGAAT
TAAGGTTTTTTAATTAACTACTTATCATTCTTTagtatacttttttatat
ttttcggtacataatagttaattaattacatcATAAGCAtgtttcttctt
tgtttttgtgtttaacGTGTTCATATTTGTGCTATTGATTTTCAGATTGA
GACTGCTCCTGCAGATTTCCGCTTTCCAACGACAAATCAAACCAGGCATT
GCTTTACCCGATACGTTGAATTTCATCGGTGAGCCATACAAAAATGTCGT
TTCATTAAGCTTGTTACTTTCACAATCTGGAAAATTAcgttatcttttta
ttttaacctTCAAATTCTCAAGGCTTGACTGTTGCTGTCTTTAAATTCTC
ATGTAGATGTGTAGCCGCAAAGGGAGAAGATGCTCCTGAATGCGACAAGT
TTGCAAAATATTATCGTTCTCTTTGCCCTGGTGAATGGGTAAGTATTTTG
AGTGCACATAGAATATTGTTGGTTGTTTCCTAATACGAAGAATTAGGATC
CATTTGTCCATCTAATTGGTTATTGACATTTCTTTTTGCAAAAATGGTTG
TGCCCATATATCTATTCAAGTATGACCTTATTAGAGTCTGGACATTTAAA
TGGAGTTGCATCTTTTATTCCTTTGGTATAAATATGGTTgtggtgaatga
tatattgtggtCAGTATTCCCACATTTGAATAGATGCATAGTACTTTGGA
CATTGACAGtttaaacttttaattgatTTCTGTGAACTCAGCTCAATATC
ATCTTTAACGTGGGATCATGGTCTATAGCCCGTCAACTTTTGTGGCTATA
CAACTTGGATTGGGTTTATTCTTTGAGATGTAGAATTATCGTTATGAAAT
AAACTGTGCTTGTCATCTAACCAAGCAATTCCATAAAATTCTACttattt
caaaatgaagattttcatATGGAATTGCTTTGCTAAAGTAACAGGCGTTT
TATATGGATTGGATTTTTGAAGCATTTTATATGGTTTTATAGTTTGTAAA
ACTTCATTGGACATCATCAATGTCTGAGAATTCATGCATGCAGTATACAG
TGGTTTGTGCTACcttttataattatatactgCTGACATCAAACTCTACT
TTGAGTTGAAGATCTTTAACCTTGTTCAGAAATTGACCAAAAAAGtgaat
ttcattttcatgtCTTTAGAGTTCAACACCCATATTATGCTCAATATGTA
GAGCAACTGAGCAAGTCCAATTATTTTAAATGGATGTCTGCTGATTATTT
TCTCCTTAGCAGTTGCCATCAAATGAAATACATATGTACAATATTGTTAT
TGTCTTGCCAATTTTTCTCAAAGGCTTATTTATTTAGTACATTTTAAGGA
AACTTAAATCTCTACCTGACATTATGTTGTAGGAGCTTTTTTGCGCTATT
GTCTGAAAATTCCATGCAGCCGACCCCACCTAATAGCATAAAGGCTTGAT
CTTTGTCTACTATCTGAAAGTTACATCCATGAACTAACAGTCTGTTATTA
TGCATTTGTCTGTGCACCAGGTTGACAGATGGAATGAGCAAAGGGAGAAC
GGAACATTCCCCGGACCGCTGTAG
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Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:17848485..17851708+

>rna-TanjilR_09277_La_Tanjil_v1.0 ID=rna-TanjilR_09277_La_Tanjil_v1.0; Name=rna-TanjilR_09277; organism=Lupinus angustifolius; type=CDS; length=786bp; location=Sequence derived from: Chr_LG15-CM007375.1:17848485..17851708+ (Lupinus angustifolius
ATGGCTCAACCTGCTTCTGACAATTCTCCAACTCTAGCTGAGCAATATTT
TGTGAACGAGACACAGGAGAAAACAGATATCGCTGCAAAACATGCGGAAG
TCAAAGAGGTTGAAAACCCAAATGAGGCTGCTTCAGAGGAAGCTCCTGTT
GAGGAAACTGTAGATGCTCCTGTTAAGGAACAGGAAACCGTAGAAGTTCC
TGTTGTGGAAACCGTAGAAGCTCCTGTTGCGGAAACCGTAGAAGCTCCTG
TTTCGGAAACCATAGAAGCTCCTGTTTCGGAAACCGTAGAAGCTCCTGTT
GCGGAAACCGTAGAAGCTCCTGTTGCAGAAACCGTAGAAGCTCCTGTTGT
GGAAACCGTTGAAGCTGCTGTTGAGAAAACTGTGGAAGCAACCCCCACAG
TTGTTGAGGAAAGCAGTGAAGCCACCCTTCCAGCTGAACAAAGCACTGAT
CCCACATCTAACACTCCCGAAGTGATCAATGAAGCAACGATAGAGCAAAG
TAGTGGGAATACTGCAGAAGAAAATGCTGGTGATCAAGTTGCAGCAGAAG
AGACACCCGGAATTAAGATTGAGACTGCTCCTGCAGATTTCCGCTTTCCA
ACGACAAATCAAACCAGGCATTGCTTTACCCGATACGTTGAATTTCATCG
ATGTGTAGCCGCAAAGGGAGAAGATGCTCCTGAATGCGACAAGTTTGCAA
AATATTATCGTTCTCTTTGCCCTGGTGAATGGGTTGACAGATGGAATGAG
CAAAGGGAGAACGGAACATTCCCCGGACCGCTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036549CX6/COA6-like_sf
IPR003213Cyt_c_oxidase_su6B
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion