rna-TanjilR_28435
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTU7_ARATH (Glutathione S-transferase U7 OS=Arabidopsis thaliana OX=3702 GN=GSTU7 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 4.163e-44 Identity = 64/104 (61.54%), Postives = 88/104 (84.62%), Query Frame = 1 Query: 7 SDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV 318 S+ + L+G W SPF+ R++ AL LKG+ Y+++E+D+TNKS+LL+Q NPV+K +PVLVH GK ++ESLVILEYIDETW+ NP+LP DPYE+ ARFWS+FVDE++ Sbjct: 7 SEEVKLLGMWASPFSRRIEIALTLKGVSYEFLEQDITNKSSLLLQLNPVHKMIPVLVHNGKPISESLVILEYIDETWRDNPILPQDPYERTMARFWSKFVDEQI 110 HSP 2 Score: 70.0922 bits (170), Expect = 5.599e-13 Identity = 32/109 (29.36%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 473 QCVPAVMTTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWLGCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKA 799 Q M K G E+ E R+ L LE GK + GG+ +GF D+ + W+ EEIVG+ ++ + +++ W + L + +IK+C+PP ++ L++ +A Sbjct: 109 QIYVTAMKVVGKTGKERDAVVEATRDLLMFLEKELVGKDFLGGKSLGFVDIVATLVAFWLMRTEEIVGVKVVPVEKFPEIHRWVKNLLGNDVIKKCIPPEDEHLKYIRA 217
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTU4_ARATH (Glutathione S-transferase U4 OS=Arabidopsis thaliana OX=3702 GN=GSTU4 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.671e-41 Identity = 66/104 (63.46%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 7 SDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV 318 + + L+GFW SPF RV+ A +LKG+ Y+Y+E+D+ NKS LL+Q NPVYKKVPVLV++GK L+ES VILEYID+ WK NP+LP DPYEKA A FW++FVDE+V Sbjct: 5 EEDVKLLGFWASPFTRRVEMAFKLKGVPYEYLEQDIVNKSPLLLQINPVYKKVPVLVYKGKILSESHVILEYIDQIWKNNPILPQDPYEKAMALFWAKFVDEQV 108 HSP 2 Score: 66.2402 bits (160), Expect = 1.406e-11 Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 473 QCVPAVMTTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWL--GCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVLRS 820 Q P + +K + A +EA+E LE GK +FGG+ IGF D+ G + C R E + GI++I + +LN W + E I++EC+PPRE+ +EH K + ++S Sbjct: 107 QVGPVAFMSVAKAEKGVEVAIKEAQELFMFLEKEVTGKDFFGGKTIGFLDLVAGSMIPFCLARGWEGM-GIDMIPEEKFPELNRWIKNLKEIEIVRECIPPREEQIEHMKKVVERIKS 223
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTU2_ARATH (Glutathione S-transferase U2 OS=Arabidopsis thaliana OX=3702 GN=GSTU2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.448e-41 Identity = 66/104 (63.46%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 7 SDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV 318 +S+ L+GFW SPF+ RV+ AL+LKG+ Y+Y+EEDL KS LL++ NPV+KKVPVLVH K L+ES VILEYID+TW NP+LP DPYEKA RFW++FVDE++ Sbjct: 5 EESVKLLGFWISPFSRRVEMALKLKGVPYEYLEEDLPKKSTLLLELNPVHKKVPVLVHNDKLLSESHVILEYIDQTWNNNPILPHDPYEKAMVRFWAKFVDEQI 108 HSP 2 Score: 63.929 bits (154), Expect = 9.160e-11 Identity = 40/118 (33.90%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 473 QCVPAVMTTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWL--GCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVLRS 820 Q +P K A EE RE L LE GK +FGG+ IGF D+ G + C R E +GI++ + +LN W + E I++EC+PP+EK +E K + +S Sbjct: 107 QILPVGFMPLVKAEKGIDVAIEEIREMLMFLEKEVTGKDFFGGKTIGFLDMVAGSMIPFCLAR-AWECLGIDMTPEDTFPELNRWIKNLNEVEIVRECIPPKEKHIERMKKIIERAKS 223
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTU5_ARATH (Glutathione S-transferase U5 OS=Arabidopsis thaliana OX=3702 GN=GSTU5 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.950e-41 Identity = 68/113 (60.18%), Postives = 90/113 (79.65%), Query Frame = 1 Query: 10 DSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV*NQIKMLQMA 348 + + L+G W SPF+ RV+ AL+LKGI Y+YVEE L NKS LL+ NP++KKVPVLVH GK++ ES VILEYIDETW QNP+LP DPYE++KARF+++ VDE++ N + + MA Sbjct: 5 EEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMN-VGFISMA 116 HSP 2 Score: 56.9954 bits (136), Expect = 2.033e-8 Identity = 35/98 (35.71%), Postives = 52/98 (53.06%), Query Frame = 2 Query: 533 AEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWL--GCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVLRS 820 AE+ RE + LE GK YFGG+ +GF D G L C R E I G+ +I + + W + + I+K+C+PPRE+ +EH + +RS Sbjct: 127 AEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGI-GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYMAERVRS 223
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max OX=3847 GN=HSP26-A PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.968e-41 Identity = 63/105 (60.00%), Postives = 87/105 (82.86%), Query Frame = 1 Query: 4 ASDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV 318 + + L+G GSPF RV+ AL+LKG++Y+++EE+L NKS LL++YNPV+KKVPV VH + +AESLVI+EYIDETWK NP+LP DPY++A ARFWS+F+D+K+ Sbjct: 4 TQEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKI 108 HSP 2 Score: 83.1889 bits (204), Expect = 9.057e-18 Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 494 TTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWLGCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVLRS 820 + F+ E++K EE E L+ LE+ + K++FGGE+ G D+A ++ W+ + +EI G+ L ++ L W +FL HP + E +PPR+ L + KA Y+ L + Sbjct: 115 SVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESLSA 223
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GST23_MAIZE (Glutathione transferase GST 23 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.368e-41 Identity = 63/107 (58.88%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 1 MASDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQN-PLLPLDPYEKAKARFWSRFVDEKV 318 MA + ++G W SP +RV+WAL LKG++Y+YV+EDL NKSA L+++NPV KKVPVLVH GK +AES +I+EYIDE WK P++P DPYE+A+ARFW+RF ++K Sbjct: 1 MAEKGVKVLGMWASPMVIRVEWALRLKGVEYEYVDEDLANKSADLLRHNPVTKKVPVLVHDGKPVAESTIIVEYIDEVWKGGYPIMPGDPYERAQARFWARFAEDKC 107 HSP 2 Score: 98.9821 bits (245), Expect = 1.220e-23 Identity = 41/109 (37.61%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 473 QCVPAVMTTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWLGCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKA 799 +C A+ F+ G Q+KA EA++ LKTLE+ EGK++FGG+ +G+ D+ GW W+ ++EE+ G +++ + + + AWF FL ++K +P R++LL NKA Sbjct: 106 KCNAALYPIFTATGEAQRKAVHEAQQCLKTLETALEGKKFFGGDAVGYLDIVVGWFAHWLPVIEEVTGASVVTHEELPLMKAWFGRFLALDVVKAALPDRDRLLAANKA 214
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTU1_ARATH (Glutathione S-transferase U1 OS=Arabidopsis thaliana OX=3702 GN=GSTU1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.810e-41 Identity = 63/104 (60.58%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 7 SDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV 318 +S+ L+GFW SPF+ RV+ AL+LKG+ Y+Y+EEDL NK+ LL++ NP++KKVPVLVH K L ES +ILEYID+TWK +P+LP DPYEKA ARFW++F+D+++ Sbjct: 5 EESVKLLGFWASPFSRRVEMALKLKGVPYEYLEEDLPNKTPLLLELNPLHKKVPVLVHNDKILLESHLILEYIDQTWKNSPILPQDPYEKAMARFWAKFIDDQI 108 HSP 2 Score: 62.003 bits (149), Expect = 3.368e-10 Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 530 AAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWL--GCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVLRS 820 A EE RE L LE GK +FGG+ IGF D+ G + C RL + I GI++I + +LN W + E ++ C+PPREK +E + ++S Sbjct: 126 AIEETRELLMFLEKEVTGKDFFGGKTIGFLDMIAGSMIPFCLARLWKGI-GIDMIPEEKFPELNRWIKNLEEVEAVRGCIPPREKQIERMTKIAETIKS 223
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.274e-40 Identity = 62/101 (61.39%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 16 LTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV 318 + L+GFW SPF+ RV+WAL++KG++Y+Y+EED NKS+LL+Q NPVYKKVPVL+H GK + ES++ILEYIDET++ +LP DPY++A ARFW++F+D+KV Sbjct: 4 VKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKV 104 HSP 2 Score: 71.2478 bits (173), Expect = 1.748e-13 Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 353 IIRQHIIICYFVSHSNSSFRSPSMLNT*T---CIYRN*SSFIFQCVPAVMTTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWLGCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVL 814 I+ II+ Y + +F PS+L + R + F+ V AV+ TF + G EQ+K EE E LK L++ + K++F G+K GF D+A +G W+ + EE G L+ ++ + W D+++ + E +PPR++LL +A ++ + Sbjct: 63 IVESMIILEYI----DETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQAV 215
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.613e-40 Identity = 61/101 (60.40%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 16 LTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV 318 + L+GFW SPF+ RV+WAL++KG++Y+Y+EED NKS+LL+Q NP++KKVPVL+H GK + ES+VILEYIDET++ +LP DPY++A ARFW++F+D+KV Sbjct: 4 VKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKV 104 HSP 2 Score: 83.9593 bits (206), Expect = 4.183e-18 Identity = 50/155 (32.26%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 353 IIRQHIIICYFVSHSNSSFRSPSMLNT*T---CIYRN*SSFIFQCVPAVMTTFSKGGVEQKKAAEEARENLKTLESGFEGKRYFGGEKIGFTDVATGWLGCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYK 808 I+ +I+ Y + +F PS+L + R + F+ VPAV+ TF + G EQ+K EE E LK L++ + K++F G+K GF D+A + W+ + EE G+ L+ ++ W +++ IKE +PPR++LL AFY+ Sbjct: 63 IVESMVILEYI----DETFEGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELL----AFYR 209
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Match: GSTU6_ARATH (Glutathione S-transferase U6 OS=Arabidopsis thaliana OX=3702 GN=GSTU6 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.632e-40 Identity = 60/106 (56.60%), Postives = 87/106 (82.08%), Query Frame = 1 Query: 7 SDSLTLIGFWGSPFALRVKWALELKGIQYQYVEEDLTNKSALLMQYNPVYKKVPVLVHQGKSLAESLVILEYIDETWKQNPLLPLDPYEKAKARFWSRFVDEKV*N 324 ++ + L+G W SPF+ R++ AL+LKG+ Y+Y+EEDL NKS+LL+ +P++KK+PVLVH GK++ ES VILEYIDETWK NP+LP DP++++KAR ++ VDEK+ N Sbjct: 4 NEEVKLLGIWASPFSRRIEMALKLKGVPYEYLEEDLENKSSLLLALSPIHKKIPVLVHNGKTIIESHVILEYIDETWKHNPILPQDPFQRSKARVLAKLVDEKIVN 109 HSP 2 Score: 56.6102 bits (135), Expect = 2.482e-8 Identity = 34/97 (35.05%), Postives = 49/97 (50.52%), Query Frame = 2 Query: 536 EEARENLKTLESGFEGKRYFGGEKIGFTDVATGWL--GCWVRLVEEIVGINLIDTKSMAKLNAWFDDFLEHPIIKECMPPREKLLEHNKAFYKVLRS 820 E+ RE + LE GK YFGG+ +GF D G + C R E + G+ +I K + N W E I+ +C+P REK +EH + +RS Sbjct: 127 EQTRELIMCLEKELAGKDYFGGKTVGFLDFVAGSMIPFCLERAWEGM-GVEMITEKKFPEYNKWVKKLKEVEIVVDCIPLREKHIEHMNNMAEKIRS 222 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_28435 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_28435_La_Tanjil_v1.0 ID=rna-TanjilR_28435_La_Tanjil_v1.0; Name=rna-TanjilR_28435; organism=Lupinus angustifolius; type=mRNA; length=832bpback to top protein sequence of rna-TanjilR_28435_La_Tanjil_v1.0 >rna-TanjilR_28435_La_Tanjil_v1.0 ID=rna-TanjilR_28435_La_Tanjil_v1.0; Name=rna-TanjilR_28435_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=223bpback to top mRNA from alignment at Chr_LG15-CM007375.1:18069025..18069856- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_28435_La_Tanjil_v1.0 ID=rna-TanjilR_28435_La_Tanjil_v1.0; Name=rna-TanjilR_28435; organism=Lupinus angustifolius; type=mRNA; length=832bp; location=Sequence derived from: Chr_LG15-CM007375.1:18069025..18069856- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:18069025..18069856- >rna-TanjilR_28435_La_Tanjil_v1.0 ID=rna-TanjilR_28435_La_Tanjil_v1.0; Name=rna-TanjilR_28435; organism=Lupinus angustifolius; type=CDS; length=672bp; location=Sequence derived from: Chr_LG15-CM007375.1:18069025..18069856- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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