rna-TanjilR_28495

Transcript Overview
Namerna-TanjilR_28495
Unique Namerna-TanjilR_28495_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length4550
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG15-CM007375.1supercontigChr_LG15-CM007375.1:18688199..18692748 +Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL262Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0431Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaiR0434Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancaR0381Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0383Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccR0477Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0459Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0481Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0326Pisum sativum Cameor genome v1aPisum sativum
anpsR0330Pisum sativum Cameor genome v1aPisum sativum
anpvR0448Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0454Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0370Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0373Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0422Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0375Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0370Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0374Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0387Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0372Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0375Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvfhR0387Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0357Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0351Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0420Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0354Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ancanR0342Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0396Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0375Cicer arietinum
ancarR0383Cicer arietinum
anccaR0336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0357Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0414Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0405Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0423Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0424Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvunR0351Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0463Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0354Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
jg55694.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat05G0066800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_14698.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigst.02G080400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.009G112300.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g189700.3Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_17522.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
PvulFLAVERTChr09.1000710Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr09.1797.12.62113179Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g196080.2Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014645588.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_009351Cajanus cajan Asha genome v1.0Cajanus cajan
Vigan.02G104200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058929266.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan04g206100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va04G060270.4Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_027334762.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_05010Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_02G00857.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun09g189700.4Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Tiffany.R1.2g159000.2Vicia faba cv. Tiffany genome v1.0Vicia faba
Cc_v2.0_06768.2Cajanus cajan cv. Asha genome v2.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_32919Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_28495gene-TanjilG_28495_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28495rna-TanjilR_28495_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_28495_La_Tanjil_v1.0rna-TanjilR_28495_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688199..18688336rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688199..18688336Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688438..18688515rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688438..18688515Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18689378..18689485rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18689378..18689485Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690161..18690223rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690161..18690223Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690308..18690469rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690308..18690469Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690865..18690978rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690865..18690978Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691079..18691141rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691079..18691141Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691271..18691600rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691271..18691600Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691676..18691840rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691676..18691840Lupinus angustifoliusexon
rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691975..18692748rna-TanjilR_28495_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691975..18692748Lupinus angustifoliusexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688199..18688336rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688199..18688336Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688438..18688515rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18688438..18688515Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18689378..18689485rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18689378..18689485Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690161..18690223rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690161..18690223Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690308..18690469rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690308..18690469Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690865..18690978rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18690865..18690978Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691079..18691141rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691079..18691141Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691271..18691600rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691271..18691600Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691676..18691840rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691676..18691840Lupinus angustifoliusCDS
rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691975..18692748rna-TanjilR_28495_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:18691975..18692748Lupinus angustifoliusCDS


Homology
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPS4_ARATH (Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana OX=3702 GN=PAPS4 PE=1 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 1.916e-159
Identity = 155/255 (60.78%), Postives = 172/255 (67.45%), Query Frame = 1 
Query: 2881 HFRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLRQLTLKV 3645
            HFRT LRCLK+WAK+RGVYSNV                                           TGFLGGVNWALLVARVCQLYPNAIPSMLV+RFFRVYTQWRWPNPVMLC+IEE+ELGFP+WD R+N RDR+H+MPIITPAYPCMNSSYNVS STLRVM EQ + GN           ILQ               EIELNK  WS+LF+ Y+FFEAY NYLQVDI+A DA+DLL WKGW+ESR RQLTLK+
Sbjct:  221 HFRTTLRCLKYWAKKRGVYSNV-------------------------------------------TGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNN----------ILQ---------------EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKI 407

HSP 2 Score: 228.794 bits (582), Expect = 1.916e-159
Identity = 107/174 (61.49%), Postives = 132/174 (75.86%), Query Frame = 3 
Query: 3756 FSFISEQIERDTNGILQCHPYPHEYADTLKPCAHSSFFMGLQRKEGVKGQEGQQFDIRGTVDEFRHEINMYAYWKPGMEIYVSHVRRKQLPAFVFPDGYRRTRIPRHMSHLAEKADEDATKCYSGS-AERCIKRKNDTEIMDVKPSKPEKRASVSPQRLECFSPESCTSRSGGT 4274
            F  ++ +IERDTNG+L CHP P+EY DT +   H +FFMGLQR EGV GQE QQFDIRGTVDEFR E+NMY +WKPGM+++VSHVRR+QLP FVFP+GYRR R  RH +    K+ ED +  +SGS  ER  KRKND+E+MDV+P KPEKRAS+SPQ L+  SPE+    +G T
Sbjct:  400 FRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWT 573

HSP 3 Score: 74.7146 bits (182), Expect = 1.916e-159
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 3 
Query: 2652 LTYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVE 2780
            L  PQDLDIS  SVL +VDEPTVRSLNGCRVADQILKLVPN E
Sbjct:  178 LVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLVPNFE 220

HSP 4 Score: 132.88 bits (333), Expect = 4.273e-30
Identity = 69/103 (66.99%), Postives = 73/103 (70.87%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VHGPGADIDTLCVGPSYVNRE                            EDFF++LH+ILAEMEEVTELHPVPDAHVPVMKFKFQGI IDLLYASIS LVVP+
Sbjct:  108 VHGPGADIDTLCVGPSYVNRE----------------------------EDFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQ 182

HSP 5 Score: 72.4034 bits (176), Expect = 2.428e-11
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 1 
Query: 1180 VVKSWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGV 1290
            +VK WVKQLT+ RGYTDQMVEDANAVIFTFGSYRLGV
Sbjct:   72 IVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGV 108

HSP 6 Score: 45.4394 bits (106), Expect = 1.353e-9
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   64 YGITKPISLAGPTDADFNRNLELEK 138
            YGITKP+SLAGP+ AD  RN+ELEK
Sbjct:   21 YGITKPLSLAGPSSADIKRNVELEK 45

HSP 7 Score: 41.5874 bits (96), Expect = 1.353e-9
Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 3 
Query:  231 LPQFLVDSGLYESDEETATRQEVLRRLDQVTSSHSSCFFYQLGYQ*KII 377
            L ++LVD GLYES ++T  R+EVL R+DQ+          Q GY  +++
Sbjct:   43 LEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGYTDQMV 91
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPS2_ARATH (Nuclear poly(A) polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=PAPS2 PE=1 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 7.946e-155
Identity = 151/255 (59.22%), Postives = 170/255 (66.67%), Query Frame = 1 
Query: 2881 HFRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLRQLTLKV 3645
            HFRT LRCLK+WAK+RGVYSNV                                           TGFLGGVNWALLVAR+CQ YPNAIPSMLV+RFFRVYTQWRWPNPVMLC+IEE++L FP+WDPR+N RDR+H+MPIITPAYPCMNSSYNVS STLRVM EQ + GN IC                          EIELNK  WS+LFQ Y+FFEAY NYLQVD++A DA+DLL WKGW+ESR RQLTLK+
Sbjct:  223 HFRTTLRCLKYWAKKRGVYSNV-------------------------------------------TGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQ-------------------------EIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKI 409

HSP 2 Score: 211.46 bits (537), Expect = 7.946e-155
Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 3 
Query: 3756 FSFISEQIERDTNGILQCHPYPHEYADTLKPCAHSSFFMGLQRKEGVKGQEGQQFDIRGTVDEFRHEINMYAYWKPGMEIYVSHVRRKQLPAFVFPDGYRRTRIPRHMSHLAEKADEDATKCYSGSAERCIKRKNDTEIMDVKPSKPEKRASVSPQRLECFSPESCTSRSGGTSQMSIDCIEGVRLDGSTMKDSDSICEIKS 4361
            F  ++ +IERDTNG+L CHP P+EY DT K   H +FFMGLQR +G  GQE QQFDIRGTVDEFR E+NMY +W+PGM+++VSHVRR+QLP+FVFP+GY+R+R  RH S    +  ++     S S ER  KRKND EIM+ +P K EKRAS S   L+  SP+S    + GT Q+ I  + G R     +   D +C + S
Sbjct:  402 FRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGITTSGTPQIGI--VPGPR--AECLVTGDLVCNVTS 599

HSP 3 Score: 73.1738 bits (178), Expect = 7.946e-155
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 3 
Query: 2652 LTYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVE 2780
            L  PQDLDIS+ SVL DVDE TVRSLNGCRVADQILKLVPN E
Sbjct:  180 LVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSE 222

HSP 4 Score: 119.398 bits (298), Expect = 7.787e-26
Identity = 64/103 (62.14%), Postives = 68/103 (66.02%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VHGP ADIDTLCVGPSYVNRE                            EDFF+   +ILAEMEEVTEL PV DAHVPVMKFKFQGISIDLLYASIS LV+P+
Sbjct:  110 VHGPMADIDTLCVGPSYVNRE----------------------------EDFFIFFRDILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQ 184

HSP 5 Score: 74.3294 bits (181), Expect = 6.107e-12
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 1 
Query: 1180 VVKSWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGV 1290
            +VK WVKQLTR RGYTDQMVEDANAVIFTFGSYRLGV
Sbjct:   74 IVKHWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGV 110

HSP 6 Score: 44.2838 bits (103), Expect = 7.828e-10
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 3 
Query:  231 LPQFLVDSGLYESDEETATRQEVLRRLDQVTSSHSSCFFYQLGYQ*KII 377
            L +FLVD GLYES EET  R+EV+ R+DQ+          Q GY  +++
Sbjct:   45 LEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQRGYTDQMV 93

HSP 7 Score: 43.5134 bits (101), Expect = 7.828e-10
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   64 YGITKPISLAGPTDADFNRNLELEK 138
            YGIT+P+S+AGP+ AD  RNLELEK
Sbjct:   23 YGITEPLSIAGPSAADVKRNLELEK 47
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPS1_ARATH (Nuclear poly(A) polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=PAPS1 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 5.705e-83
Identity = 131/263 (49.81%), Postives = 160/263 (60.84%), Query Frame = 1 
Query: 2881 HFRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLRQLTLKVVLLYSVIR 3669
            +FRT LRC++FWAKRRGVYSNV                                           +GFLGG+NWALLVAR+CQLYPNA+P++LV+RFFRV+ QW WPN + LCS +E  LG  +WDPR NP+DR HIMPIITPAYPCMNSSYNVS STLR+M  + + GN IC+                          +E NKA W  LF+P+ FFEAY NYLQ+DI A + DDL  WKGW+ESRLRQLTLK+   + ++ 
Sbjct:  211 NFRTTLRCMRFWAKRRGVYSNV-------------------------------------------SGFLGGINWALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEA-------------------------MESNKADWDTLFEPFAFFEAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHFKMLH 405

HSP 2 Score: 63.5438 bits (153), Expect = 5.705e-83
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 3 
Query: 2661 PQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVE 2780
            P+DLD+S  S+L + DE TVRSLNGCRV DQIL+LVPN++
Sbjct:  171 PEDLDLSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQ 210

HSP 3 Score: 123.25 bits (308), Expect = 3.702e-27
Identity = 57/106 (53.77%), Postives = 74/106 (69.81%), Query Frame = 3 
Query: 3765 ISEQIERDTNGILQCHPYPHEYADTLKPCAHSSFFMGLQRKEGVKGQEGQQFDIRGTVDEFRHEINMYAYWKPGMEIYVSHVRRKQLPAFVFPDGYRRTRIPRHMS 4082
            ++ +IER    +L CHP+PH++ DT +P  H S+FMGLQRK+GV   EG+QFDIR TV+EF+H +N Y  W PGMEI V H++R+ LP FVFP G R    P H S
Sbjct:  393 LTLKIERHFK-MLHCHPHPHDFQDTSRPL-HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVR----PSHTS 492

HSP 4 Score: 98.5969 bits (244), Expect = 2.060e-19
Identity = 52/103 (50.49%), Postives = 59/103 (57.28%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VHGPGADIDTLCVGP +  RE                             DFF  L  +L+EM EVTELHPVPDAHVP+M FK  G+SIDLLYA +   V+PE
Sbjct:   98 VHGPGADIDTLCVGPRHATREG----------------------------DFFGELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPE 172
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPOG_HUMAN (Poly(A) polymerase gamma OS=Homo sapiens OX=9606 GN=PAPOLG PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 9.893e-54
Identity = 100/250 (40.00%), Postives = 130/250 (52.00%), Query Frame = 1 
Query: 2884 FRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLRQL 3633
            FR  LR +K WAKRRG+YSN+                                            GFLGGV+WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV+L   EE+ L  P+WDPR NP DR+H+MPIITPAYP  NS+YNVS ST  VM+E+ + G  + D                         EI   K+ WS L +P  FF+ Y +Y+ +   A   ++ L W G +ES++R L
Sbjct:  219 FRLTLRAVKLWAKRRGIYSNM-------------------------------------------LGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTD-------------------------EILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVL 400

HSP 2 Score: 46.2098 bits (108), Expect = 9.893e-54
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 3 
Query: 2655 TYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVEVI 2786
            T   +LD+ D S L  +D   +RSLNGCRV D+IL LVPN E  
Sbjct:  176 TISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETF 219
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPOG_MOUSE (Poly(A) polymerase gamma OS=Mus musculus OX=10090 GN=Papolg PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.237e-53
Identity = 100/250 (40.00%), Postives = 130/250 (52.00%), Query Frame = 1 
Query: 2884 FRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLRQL 3633
            FR  LR +K WAKRRG+YSN+                                            GFLGGV+WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV+L   EE+ L  P+WDPR NP DR+H+MPIITPAYP  NS+YNVS ST  VM+E+ + G  + D                         EI   K+ WS L +P  FF+ Y +Y+ +   A   ++ L W G +ES++R L
Sbjct:  219 FRLTLRAVKLWAKRRGIYSNM-------------------------------------------LGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTD-------------------------EILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVL 400

HSP 2 Score: 46.2098 bits (108), Expect = 1.237e-53
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 3 
Query: 2655 TYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVEVI 2786
            T   +LD+ D S L  +D   +RSLNGCRV D+IL LVPN E  
Sbjct:  176 TISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETF 219
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAP_DICDI (Poly(A) polymerase OS=Dictyostelium discoideum OX=44689 GN=papA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.389e-52
Identity = 97/250 (38.80%), Postives = 133/250 (53.20%), Query Frame = 1 
Query: 2881 HFRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENE-LGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLR 3627
            +FR ALRC+K WA RRG+YSN+                                            GFLGGV+WALL AR+CQLYPN+ PS ++ RFF+VY  W+WP P++LC I+E   LG  +W+P+R   D+ H+MPIITPAYP MNS+YNVS STL++M  +         VRG  I                   +IE  +  W  L +   FF  Y+ Y+++D  +++ +D   W+GWIES+LR
Sbjct:  253 NFRMALRCIKLWAIRRGIYSNI-------------------------------------------LGFLGGVSWALLTARICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPIITPAYPSMNSTYNVSKSTLQLMKSEF--------VRGAEITR-----------------KIETGECTWKNLLEKCDFFTRYSFYIEIDCYSMNEEDSRKWEGWIESKLR 431

HSP 2 Score: 51.2174 bits (121), Expect = 1.389e-52
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 3 
Query: 2661 PQDL-DISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNV 2777
            P++L D+ D S L ++DE ++ SLNGCRV DQILKLVPN+
Sbjct:  212 PEELNDLIDESFLKNIDEKSILSLNGCRVTDQILKLVPNI 251

HSP 3 Score: 70.4774 bits (171), Expect = 1.019e-10
Identity = 40/103 (38.83%), Postives = 50/103 (48.54%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VHGPG+DIDTLCVGP ++ R                              DFF  L +IL    E+TE   V DA VPV+   F GI IDL+YA ++   +PE
Sbjct:  140 VHGPGSDIDTLCVGPKHIMRS-----------------------------DFFDDLSDILKVHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPE 213
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPOA_MOUSE (Poly(A) polymerase alpha OS=Mus musculus OX=10090 GN=Papola PE=1 SV=4)

HSP 1 Score: 187.193 bits (474), Expect = 6.761e-51
Identity = 101/249 (40.56%), Postives = 129/249 (51.81%), Query Frame = 1 
Query: 2881 HFRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLR 3627
            +FR  LR +K WAKR  +YSN+                                            GFLGGV+WA+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L   EE  L  P+WDPR NP DR+H+MPIITPAYP  NS+YNVS ST  VM+E+ + G  I D                         EI L+KA+WS LF+   FF+ Y +Y+ +   A      L W G +ES++R
Sbjct:  219 NFRLTLRAIKLWAKRHNIYSNI-------------------------------------------LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD-------------------------EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIR 399

HSP 2 Score: 38.891 bits (89), Expect = 6.761e-51
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 3 
Query: 2655 TYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVE 2780
            T P+DLD+ D S+L ++D   +RSLNGCRV D+IL LVPN++
Sbjct:  177 TIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNID 218

HSP 3 Score: 60.4622 bits (145), Expect = 1.232e-7
Identity = 36/103 (34.95%), Postives = 48/103 (46.60%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VH  GADID LCV P +V+R                              DFF   ++ L   EEV +L  V +A VPV+K  F GI ID+L+A ++   +PE
Sbjct:  107 VHTKGADIDALCVAPRHVDRS-----------------------------DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 180
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPOA_HUMAN (Poly(A) polymerase alpha OS=Homo sapiens OX=9606 GN=PAPOLA PE=1 SV=4)

HSP 1 Score: 186.808 bits (473), Expect = 7.654e-51
Identity = 101/249 (40.56%), Postives = 129/249 (51.81%), Query Frame = 1 
Query: 2881 HFRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLR 3627
            +FR  LR +K WAKR  +YSN+                                            GFLGGV+WA+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L   EE  L  P+WDPR NP DR+H+MPIITPAYP  NS+YNVS ST  VM+E+ + G  I D                         EI L+KA+WS LF+   FF+ Y +Y+ +   A      L W G +ES++R
Sbjct:  219 NFRLTLRAIKLWAKRHNIYSNI-------------------------------------------LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD-------------------------EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIR 399

HSP 2 Score: 38.891 bits (89), Expect = 7.654e-51
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 3 
Query: 2655 TYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVE 2780
            T P+DLD+ D S+L ++D   +RSLNGCRV D+IL LVPN++
Sbjct:  177 TIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNID 218

HSP 3 Score: 60.4622 bits (145), Expect = 1.369e-7
Identity = 36/103 (34.95%), Postives = 48/103 (46.60%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VH  GADID LCV P +V+R                              DFF   ++ L   EEV +L  V +A VPV+K  F GI ID+L+A ++   +PE
Sbjct:  107 VHTKGADIDALCVAPRHVDRS-----------------------------DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 180
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPOA_BOVIN (Poly(A) polymerase alpha OS=Bos taurus OX=9913 GN=PAPOLA PE=1 SV=3)

HSP 1 Score: 186.808 bits (473), Expect = 8.455e-51
Identity = 101/249 (40.56%), Postives = 129/249 (51.81%), Query Frame = 1 
Query: 2881 HFRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLR 3627
            +FR  LR +K WAKR  +YSN+                                            GFLGGV+WA+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L   EE  L  P+WDPR NP DR+H+MPIITPAYP  NS+YNVS ST  VM+E+ + G  I D                         EI L+KA+WS LF+   FF+ Y +Y+ +   A      L W G +ES++R
Sbjct:  219 NFRLTLRAIKLWAKRHNIYSNI-------------------------------------------LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD-------------------------EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIR 399

HSP 2 Score: 38.891 bits (89), Expect = 8.455e-51
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 3 
Query: 2655 TYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVE 2780
            T P+DLD+ D S+L ++D   +RSLNGCRV D+IL LVPN++
Sbjct:  177 TIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNID 218

HSP 3 Score: 60.077 bits (144), Expect = 1.473e-7
Identity = 36/103 (34.95%), Postives = 48/103 (46.60%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VH  GADID LCV P +V+R                              DFF   ++ L   EEV +L  V +A VPV+K  F GI ID+L+A ++   +PE
Sbjct:  107 VHTKGADIDALCVAPRHVDRS-----------------------------DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 180
[Close]
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Match: PAPO1_XENLA (Poly(A) polymerase alpha-A (Fragment) OS=Xenopus laevis OX=8355 GN=papola-a PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.535e-50
Identity = 101/248 (40.73%), Postives = 126/248 (50.81%), Query Frame = 1 
Query: 2884 FRTALRCLKFWAKRRGVYSNV*VSLQPL*FFIFPYNIQR**VFISTDISFYFAVFVPFFPNI*VTGFLGGVNWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRICDVRGVFILILQ*FCDYLCI*LVFYC*EIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESRLR 3627
            FR  LR +K WAKR  +YSN+                                            GFLGGV+WA+LVAR CQLYPNAI S LV +FF V+++W WPNPV+L   EE  L  P+WDPR NP DR+H+MPIITPAYP  NS+YNVS ST  VM+E+ + G  I D                         EI L KA+WS LF    FF+ Y +Y+ +   A      L W G +ES++R
Sbjct:  202 FRLTLRAIKLWAKRHNIYSNI-------------------------------------------LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITD-------------------------EILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGLVESKIR 381

HSP 2 Score: 38.891 bits (89), Expect = 1.535e-50
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 3 
Query: 2655 TYPQDLDISDGSVLHDVDEPTVRSLNGCRVADQILKLVPNVE 2780
            T P+DLD+ D S+L ++D   +RSLNGCRV D+IL LVPN++
Sbjct:  159 TIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNID 200

HSP 3 Score: 62.003 bits (149), Expect = 3.740e-8
Identity = 36/103 (34.95%), Postives = 49/103 (47.57%), Query Frame = 1 
Query: 1963 VHGPGADIDTLCVGPSYVNREVRHCSWLLFSI*YYPCNCYILDNISLL*EDFFMLLHNILAEMEEVTELHPVPDAHVPVMKFKFQGISIDLLYASISHLVVPE 2271
            VH  GADID LCV P +V+R                              DFF   ++ L + EEV +L  V +A VPV+K  F GI ID+L+A ++   +PE
Sbjct:   89 VHTKGADIDALCVAPRHVDRS-----------------------------DFFSSFYDKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 162
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_28495 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PAPS4_ARATH1.916e-15960.78Nuclear poly(A) polymerase 4 OS=Arabidopsis thalia... [more]
PAPS2_ARATH7.946e-15559.22Nuclear poly(A) polymerase 2 OS=Arabidopsis thalia... [more]
PAPS1_ARATH5.705e-8349.81Nuclear poly(A) polymerase 1 OS=Arabidopsis thalia... [more]
PAPOG_HUMAN9.893e-5440.00Poly(A) polymerase gamma OS=Homo sapiens OX=9606 G... [more]
PAPOG_MOUSE1.237e-5340.00Poly(A) polymerase gamma OS=Mus musculus OX=10090 ... [more]
PAP_DICDI1.389e-5238.80Poly(A) polymerase OS=Dictyostelium discoideum OX=... [more]
PAPOA_MOUSE6.761e-5140.56Poly(A) polymerase alpha OS=Mus musculus OX=10090 ... [more]
PAPOA_HUMAN7.654e-5140.56Poly(A) polymerase alpha OS=Homo sapiens OX=9606 G... [more]
PAPOA_BOVIN8.455e-5140.56Poly(A) polymerase alpha OS=Bos taurus OX=9913 GN=... [more]
PAPO1_XENLA1.535e-5040.73Poly(A) polymerase alpha-A (Fragment) OS=Xenopus l... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007010Poly(A) polymerase, RNA-binding domainPFAMPF04926PAP_RNA-bindcoord: 434..501
e-value: 1.4E-5
score: 24.8
coord: 370..428
e-value: 1.5E-10
score: 40.9
NoneNo IPR availableGENE3D1.10.1410.10coord: 23..365
e-value: 2.6E-154
score: 514.8
NoneNo IPR availableGENE3D3.30.70.590coord: 369..485
e-value: 1.6E-18
score: 68.7
NoneNo IPR availableGENE3D3.30.460.10coord: 55..211
e-value: 2.6E-154
score: 514.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableCDDcd05402NT_PAP_TUTasecoord: 63..217
e-value: 9.35356E-29
score: 108.799
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 19..216
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 218..367
IPR014492Poly(A) polymerasePIRSFPIRSF018425PolyA_polymerasecoord: 13..605
e-value: 3.5E-222
score: 736.8
IPR007012Poly(A) polymerase, central domainPFAMPF04928PAP_centralcoord: 23..367
e-value: 2.3E-110
score: 367.8
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 93..172
e-value: 2.2E-9
score: 37.5
IPR011068Nucleotidyltransferase, class I-like, C-terminalSUPERFAMILY55003PAP/Archaeal CCA-adding enzyme, C-terminal domaincoord: 370..495

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_28495_La_Tanjil_v1.0 ID=rna-TanjilR_28495_La_Tanjil_v1.0; Name=rna-TanjilR_28495; organism=Lupinus angustifolius; type=mRNA; length=4550bp
ATGGCGGTTTCCGATACTCCCAACGGTGCCGCTTTTACACCACCGCCCCC
ACCTACGCCAGAATACGGGATCACAAAGCCTATCTCTCTTGCCGGTCCCA
CCGATGCTGATTTCAACCGTAACCTAGAATTGGAGAAGGTAACTAACTAC
TCATTCTAATTCATCTCACCATTCCACTCCGAACCTTCGCATTTTTCTTA
TTGTTCTGTAAATCGATTTGATTTCGTTTTCTGCCTCAGTTCTTGGTTGA
TTCGGGGCTTTACGAGAGCGATGAAGAAACTGCAACTAGACAAGAGGTTC
TTCGCCGCCTTGATCAGGTGACGTCATCTCActcatcttgttttttttat
caactTGGTTATCAgtgaaaaatcattttattttgctaGTTATATTTGAA
CTATTAATGTGAAAATTACCTTAAAGGGATGGTGATGATAATTGAAATTA
CGCAGAACCCCTGAGAAGAGATGAACGTAGCTGTTGAAAGTGTTaggtgt
aattaagtcaaatcTGAAGTGATGCCATCGTAATTTCCCTTAATTGCACT
TGACAGATGACGCATCTGGttttaaaaattacaccaaCTACCTTTGAGAG
TTTGAggtttatatataatcattacacTGCATAGATGAGTGTAACTTTTA
TAACAAGAGGGGGTGTTAAGTGTAATCATGTCAAATATCAAGAGAGGTCA
GTGTAACTTTCCTTAATTGCACCTGACACAGTTTGTTTTGGAAATTTCAC
CAACCTCCATTGATGTTTATGTTATCATTACTCTGGAAAAATGAGTGTAA
CTTTTTGCAACAAGACTAGTGTCAAGTGGAATTAAGTCACATCTGAAGGA
GGTTAGTGTATTTTGTCCTTTATTAATTAGTAATTACCGAGGTGTTCCAT
TTACCATTTTTGGTGTCTTTCTAaccttatatttatgttattattattct
gTATTTAATTTATGGTAATGATATTCCTccaagttttgaaaaaacattaT
GAAACTTGTTTTATATTGTTACACATTGAACAACATGTTTGGAATGTTAA
GGATTCATTATGTTCTTCATTGCCAGTGATATGATGGCTTAATGATGGTA
CTTTTTCCAGTCATGATTGAGGTGTTTCACTgtcattaaattttaacttt
tattgtAACAAAATTGTCTGTCATCGTAGGTTGTAAAAAGCTGGGTGAAG
CAGTTGACACGCCTGCGAGGCTACACAGATCAGATGGTTGAGGATGCAAA
TGCTGTGATTTTCACTTTTGGTTCTTATCGACTAGGGGTGAGTATGCTTG
TATTTCCAGGCTCACTTTAGTGCTTGCATTTGCGTGCGGTGAAGTGAAAA
TATGTACACAAGGGATAATTGCTAATTTCTTTTTATCATTTGGAGTTTGG
TGGACTTCAACTTAAGACTCGCCGATACTCCTTGACTTGATTCATCATCA
TTATATGCCTGGAATTTGGAAAGCCAAATTTTGTAGACAAAATAATCTCA
CAATAATTGGTATGGCAGTCCCTTTCTGCTTAACACTCGACAGCTAACTG
CCACTCAAGAAAGAGACACCTGATGTGTTTCGTGTATATGCTGATGAGTG
TCACAATAATGTTTGATTCCCCAGGCCGTGGTAGTGCTGGAGTCCAATTG
TAACAATTGATTATTTGTACCAATATTACACTTCAGTCACTGTCAACAAA
TAACTGTTGGGTGATGATTTctattgaaatttattccactGTTATCATAA
AATGTCTTAATCTTTTGCCTGCATGAGTATTATCACCTTCTATTGGGCTC
ATATGTTCTCATAGCAAAACATGATATTCTATTCTCAAGAAAATATTAGC
AAAAAGTAGATGAGCCATAATATCGTTGTCTTATAGCATGTTCTGCTGTC
TGTTTTGTAAGTTTCTGTTCTATAGGtatttgttaatattgcaccaaTTC
AATCATTTCCAGGTGCATGGGCCTGGAGCTGACATAGACACTTTGTGTGT
TGGTCCTTCTTATGTGAATCGAGAGGTGAGACACTGCAGCTGGTTACTTT
TTTCAATTTAGTATTATCCTTGTAATTGTTATATTTTAGACAATATATCA
CTTTTGTAGGAAGACTTCTTTATGCTTTTGCATAACATCCTCGCTGAAAT
GGAAGAAGTTACTGAACTCCATCCAGTTCCTGATGCACATGTCCCAGTAA
TGAAATTCAAGTTCCAGGGAATATCTATAGATTTGCTGTATGCAAGCATA
TCTCATTTAGTTGTCCCAGAAGTAAGTTGGGTTACCGTATTCAACATTGC
CTTTGTCCATTCTGAAagctgttttttttattattatagtttGAGAGCTC
ATTTTTATCTGGATGTTTTTTATTACAAAGGCTTTCATCTTGCATTAAGA
ATATGAGGGCTTTCCTAAGATAAGCACACCATGAATTATAAAGTTTGAAG
CTCCTTATGCTTTAATCAGGATTGTCTTTGTTACCACCCATCCATTTCAT
GTTTATTTTgcattatttattgtttctaAGAGAAAAAAAGCACAATGCTT
TGGCTTTTCTTCCATTGGTACTTTCTCAATCTTCCAACttggttttttgt
tttgtttttcgtTTATTTTAAACTTGTCATGATTTTGATATGGTTTTGAA
ACTCACTTATCCACAGGACCTGGATATCTCAGATGGTTCTGTTCTGCATG
ATGTTGACGAGCCAACTGTTCGAAGTCTTAATGGCTGCCGTGTGGCAGAT
CAAATTCTTAAACTTGTTCCAAATGTTGaggttattatatattttattta
gtttggttcattgatatattatatttaatgttcTTTCGTCTTATTAATTT
TGATAGTCCATTAACCCTTGACAATGATAGCACTTCCGAACTGCACTGAG
ATGTTTAAAGTTTTGGGCTAAAAGGCGTGGTGTTTATTCAAATGTATGAG
TGTCTCTACAACCTTTATAGTTCTTTATTTTTCCCTATAACATACAACGT
TAATAGGTTTTCATCTCCACTGACATTAGCTTTTATTTTGCTGTCTTCGT
TCCTTTCTTTCCGAATATTTAGGTTACCGGATTCCTTGGTGGTGTAAATT
GGGCCCTTTTGGTTGCTCGAGTTTGCCAGCTTTACCCAAATGCAATCCCT
AGTATGTTGGTCACTCGATTCTTTAGGGTCTATACACAGTGGCGATGGCC
TAACCCTGTAATGCTATGCTCTATTGAAGAAAATGAACTGGGTTTCCCTA
TATGGGATCCTCGTAGAAACCCCCGAGACAGATTTCACATTATGCCAATA
ATTACTCCTGCATACCCTTGCATGAATTCCAGTTACAATGTCTCAGCAAG
CACTCTTCGTGTTATGATGGAACAGTTACGCCATGGCAACAGGATCTGTG
ACGTAAGAGGAgtctttattcttattttacaaTAATTTTGTGACTATCTC
TGTATCTGATTGGTATTTTACTGTTAGGAAATTGAGCTTAACAAAGCTCA
GTGGAGTGCACTTTTCCAGCCATATCTATTTTTTGAGGCGTACAACAACT
ATTTACAAGTGGACATAATTGCAGTAGACGCTGATGATTTACTACCGTGG
AAGGGTTGGATAGAGTCTCGGTTGAGACAGCTTACCCTCAAGGTTGTGTT
GTTGTACTCTGTAATAAGACTTTCCTCTGACTTTGTTCATTGGAAACATC
TTATCTTTGGACATTTggcaaattaaattttttgttgttatatattAACA
TATGTTTTTCATTTATCTCTGAGCAGATAGAACGGGATACGAATGGGATA
TTGCAgtgtcatccttatcctcatgagTATGCAGATACATTGAAGCCTTG
TGCacattcttcatttttcatggGCTTGCAAAGGAAAGAGGGGGTAAAAG
GTCAAGAAGGCCAGCAATTTGATATACGTGGAACAGTTGATGAATTCAGA
CATGAAATAAATATGTATGCATATTGGAAGCCAGGGATGGAAATTTATGT
TTCTCATGTTCGTCGGAAGCAGCTCCCTGCATTTGTTTTTCCAGATGGTT
ATAGACGTACTCGGATTCCAAGACATATGAGCCATTTAGCTGAAAAAGCA
GATGAGGATGCTACAAAGTGCTATTCTGGGTCTGCTGAGAGATGCATCAA
GAGGAAAAATGACACTGAAATTATGGATGTGAAGCCAAGCAAACCAGAAA
AACGAGCCTCTGTTAGCCCACAGAGGCTAGAGTGTTTTTCTCCTGAAAGT
TGTACCAGTAGATCAGGTGGTACATCTCAAATGAGTATTGATTGTATTGA
AGGGGTTAGGTTAGATGGTTCAACAATGAAAGATTCCGACAGCATTTGTG
AAATTAAGTCATCTGATAGTCTTGTAGGAAGTGCAATATGTGCTGAAAGA
CCTGACTTGCAGATTAGTGAAACAGGTGGTGTTGACTCCACATTTGATAG
GCAGAAATCAAGGAGTCCAGACGTTCAGAATGAGGTAAGCCTGTTGAACC
AGTGGAGCAACCTTCAATCAGGATGTTTTGGTTCATGTGAAGTTCCTTAA
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protein sequence of rna-TanjilR_28495_La_Tanjil_v1.0

>rna-TanjilR_28495_La_Tanjil_v1.0 ID=rna-TanjilR_28495_La_Tanjil_v1.0; Name=rna-TanjilR_28495_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=664bp
MAVSDTPNGAAFTPPPPPTPEYGITKPISLAGPTDADFNRNLELEKFLVD
SGLYESDEETATRQEVLRRLDQVVKSWVKQLTRLRGYTDQMVEDANAVIF
TFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFMLLHNILAEMEEVTELH
PVPDAHVPVMKFKFQGISIDLLYASISHLVVPEDLDISDGSVLHDVDEPT
VRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGV
NWALLVARVCQLYPNAIPSMLVTRFFRVYTQWRWPNPVMLCSIEENELGF
PIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQLRHGNRI
CDEIELNKAQWSALFQPYLFFEAYNNYLQVDIIAVDADDLLPWKGWIESR
LRQLTLKIERDTNGILQCHPYPHEYADTLKPCAHSSFFMGLQRKEGVKGQ
EGQQFDIRGTVDEFRHEINMYAYWKPGMEIYVSHVRRKQLPAFVFPDGYR
RTRIPRHMSHLAEKADEDATKCYSGSAERCIKRKNDTEIMDVKPSKPEKR
ASVSPQRLECFSPESCTSRSGGTSQMSIDCIEGVRLDGSTMKDSDSICEI
KSSDSLVGSAICAERPDLQISETGGVDSTFDRQKSRSPDVQNEVSLLNQW
SNLQSGCFGSCEVP
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mRNA from alignment at Chr_LG15-CM007375.1:18688199..18692748+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_28495_La_Tanjil_v1.0 ID=rna-TanjilR_28495_La_Tanjil_v1.0; Name=rna-TanjilR_28495; organism=Lupinus angustifolius; type=mRNA; length=4550bp; location=Sequence derived from: Chr_LG15-CM007375.1:18688199..18692748+ (Lupinus angustifolius
ATGGCGGTTTCCGATACTCCCAACGGTGCCGCTTTTACACCACCGCCCCC
ACCTACGCCAGAATACGGGATCACAAAGCCTATCTCTCTTGCCGGTCCCA
CCGATGCTGATTTCAACCGTAACCTAGAATTGGAGAAGGTAACTAACTAC
TCATTCTAATTCATCTCACCATTCCACTCCGAACCTTCGCATTTTTCTTA
TTGTTCTGTAAATCGATTTGATTTCGTTTTCTGCCTCAGTTCTTGGTTGA
TTCGGGGCTTTACGAGAGCGATGAAGAAACTGCAACTAGACAAGAGGTTC
TTCGCCGCCTTGATCAGGTGACGTCATCTCActcatcttgttttttttat
caactTGGTTATCAgtgaaaaatcattttattttgctaGTTATATTTGAA
CTATTAATGTGAAAATTACCTTAAAGGGATGGTGATGATAATTGAAATTA
CGCAGAACCCCTGAGAAGAGATGAACGTAGCTGTTGAAAGTGTTaggtgt
aattaagtcaaatcTGAAGTGATGCCATCGTAATTTCCCTTAATTGCACT
TGACAGATGACGCATCTGGttttaaaaattacaccaaCTACCTTTGAGAG
TTTGAggtttatatataatcattacacTGCATAGATGAGTGTAACTTTTA
TAACAAGAGGGGGTGTTAAGTGTAATCATGTCAAATATCAAGAGAGGTCA
GTGTAACTTTCCTTAATTGCACCTGACACAGTTTGTTTTGGAAATTTCAC
CAACCTCCATTGATGTTTATGTTATCATTACTCTGGAAAAATGAGTGTAA
CTTTTTGCAACAAGACTAGTGTCAAGTGGAATTAAGTCACATCTGAAGGA
GGTTAGTGTATTTTGTCCTTTATTAATTAGTAATTACCGAGGTGTTCCAT
TTACCATTTTTGGTGTCTTTCTAaccttatatttatgttattattattct
gTATTTAATTTATGGTAATGATATTCCTccaagttttgaaaaaacattaT
GAAACTTGTTTTATATTGTTACACATTGAACAACATGTTTGGAATGTTAA
GGATTCATTATGTTCTTCATTGCCAGTGATATGATGGCTTAATGATGGTA
CTTTTTCCAGTCATGATTGAGGTGTTTCACTgtcattaaattttaacttt
tattgtAACAAAATTGTCTGTCATCGTAGGTTGTAAAAAGCTGGGTGAAG
CAGTTGACACGCCTGCGAGGCTACACAGATCAGATGGTTGAGGATGCAAA
TGCTGTGATTTTCACTTTTGGTTCTTATCGACTAGGGGTGAGTATGCTTG
TATTTCCAGGCTCACTTTAGTGCTTGCATTTGCGTGCGGTGAAGTGAAAA
TATGTACACAAGGGATAATTGCTAATTTCTTTTTATCATTTGGAGTTTGG
TGGACTTCAACTTAAGACTCGCCGATACTCCTTGACTTGATTCATCATCA
TTATATGCCTGGAATTTGGAAAGCCAAATTTTGTAGACAAAATAATCTCA
CAATAATTGGTATGGCAGTCCCTTTCTGCTTAACACTCGACAGCTAACTG
CCACTCAAGAAAGAGACACCTGATGTGTTTCGTGTATATGCTGATGAGTG
TCACAATAATGTTTGATTCCCCAGGCCGTGGTAGTGCTGGAGTCCAATTG
TAACAATTGATTATTTGTACCAATATTACACTTCAGTCACTGTCAACAAA
TAACTGTTGGGTGATGATTTctattgaaatttattccactGTTATCATAA
AATGTCTTAATCTTTTGCCTGCATGAGTATTATCACCTTCTATTGGGCTC
ATATGTTCTCATAGCAAAACATGATATTCTATTCTCAAGAAAATATTAGC
AAAAAGTAGATGAGCCATAATATCGTTGTCTTATAGCATGTTCTGCTGTC
TGTTTTGTAAGTTTCTGTTCTATAGGtatttgttaatattgcaccaaTTC
AATCATTTCCAGGTGCATGGGCCTGGAGCTGACATAGACACTTTGTGTGT
TGGTCCTTCTTATGTGAATCGAGAGGTGAGACACTGCAGCTGGTTACTTT
TTTCAATTTAGTATTATCCTTGTAATTGTTATATTTTAGACAATATATCA
CTTTTGTAGGAAGACTTCTTTATGCTTTTGCATAACATCCTCGCTGAAAT
GGAAGAAGTTACTGAACTCCATCCAGTTCCTGATGCACATGTCCCAGTAA
TGAAATTCAAGTTCCAGGGAATATCTATAGATTTGCTGTATGCAAGCATA
TCTCATTTAGTTGTCCCAGAAGTAAGTTGGGTTACCGTATTCAACATTGC
CTTTGTCCATTCTGAAagctgttttttttattattatagtttGAGAGCTC
ATTTTTATCTGGATGTTTTTTATTACAAAGGCTTTCATCTTGCATTAAGA
ATATGAGGGCTTTCCTAAGATAAGCACACCATGAATTATAAAGTTTGAAG
CTCCTTATGCTTTAATCAGGATTGTCTTTGTTACCACCCATCCATTTCAT
GTTTATTTTgcattatttattgtttctaAGAGAAAAAAAGCACAATGCTT
TGGCTTTTCTTCCATTGGTACTTTCTCAATCTTCCAACttggttttttgt
tttgtttttcgtTTATTTTAAACTTGTCATGATTTTGATATGGTTTTGAA
ACTCACTTATCCACAGGACCTGGATATCTCAGATGGTTCTGTTCTGCATG
ATGTTGACGAGCCAACTGTTCGAAGTCTTAATGGCTGCCGTGTGGCAGAT
CAAATTCTTAAACTTGTTCCAAATGTTGaggttattatatattttattta
gtttggttcattgatatattatatttaatgttcTTTCGTCTTATTAATTT
TGATAGTCCATTAACCCTTGACAATGATAGCACTTCCGAACTGCACTGAG
ATGTTTAAAGTTTTGGGCTAAAAGGCGTGGTGTTTATTCAAATGTATGAG
TGTCTCTACAACCTTTATAGTTCTTTATTTTTCCCTATAACATACAACGT
TAATAGGTTTTCATCTCCACTGACATTAGCTTTTATTTTGCTGTCTTCGT
TCCTTTCTTTCCGAATATTTAGGTTACCGGATTCCTTGGTGGTGTAAATT
GGGCCCTTTTGGTTGCTCGAGTTTGCCAGCTTTACCCAAATGCAATCCCT
AGTATGTTGGTCACTCGATTCTTTAGGGTCTATACACAGTGGCGATGGCC
TAACCCTGTAATGCTATGCTCTATTGAAGAAAATGAACTGGGTTTCCCTA
TATGGGATCCTCGTAGAAACCCCCGAGACAGATTTCACATTATGCCAATA
ATTACTCCTGCATACCCTTGCATGAATTCCAGTTACAATGTCTCAGCAAG
CACTCTTCGTGTTATGATGGAACAGTTACGCCATGGCAACAGGATCTGTG
ACGTAAGAGGAgtctttattcttattttacaaTAATTTTGTGACTATCTC
TGTATCTGATTGGTATTTTACTGTTAGGAAATTGAGCTTAACAAAGCTCA
GTGGAGTGCACTTTTCCAGCCATATCTATTTTTTGAGGCGTACAACAACT
ATTTACAAGTGGACATAATTGCAGTAGACGCTGATGATTTACTACCGTGG
AAGGGTTGGATAGAGTCTCGGTTGAGACAGCTTACCCTCAAGGTTGTGTT
GTTGTACTCTGTAATAAGACTTTCCTCTGACTTTGTTCATTGGAAACATC
TTATCTTTGGACATTTggcaaattaaattttttgttgttatatattAACA
TATGTTTTTCATTTATCTCTGAGCAGATAGAACGGGATACGAATGGGATA
TTGCAgtgtcatccttatcctcatgagTATGCAGATACATTGAAGCCTTG
TGCacattcttcatttttcatggGCTTGCAAAGGAAAGAGGGGGTAAAAG
GTCAAGAAGGCCAGCAATTTGATATACGTGGAACAGTTGATGAATTCAGA
CATGAAATAAATATGTATGCATATTGGAAGCCAGGGATGGAAATTTATGT
TTCTCATGTTCGTCGGAAGCAGCTCCCTGCATTTGTTTTTCCAGATGGTT
ATAGACGTACTCGGATTCCAAGACATATGAGCCATTTAGCTGAAAAAGCA
GATGAGGATGCTACAAAGTGCTATTCTGGGTCTGCTGAGAGATGCATCAA
GAGGAAAAATGACACTGAAATTATGGATGTGAAGCCAAGCAAACCAGAAA
AACGAGCCTCTGTTAGCCCACAGAGGCTAGAGTGTTTTTCTCCTGAAAGT
TGTACCAGTAGATCAGGTGGTACATCTCAAATGAGTATTGATTGTATTGA
AGGGGTTAGGTTAGATGGTTCAACAATGAAAGATTCCGACAGCATTTGTG
AAATTAAGTCATCTGATAGTCTTGTAGGAAGTGCAATATGTGCTGAAAGA
CCTGACTTGCAGATTAGTGAAACAGGTGGTGTTGACTCCACATTTGATAG
GCAGAAATCAAGGAGTCCAGACGTTCAGAATGAGGTAAGCCTGTTGAACC
AGTGGAGCAACCTTCAATCAGGATGTTTTGGTTCATGTGAAGTTCCTTAA
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Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:18688199..18692748+

>rna-TanjilR_28495_La_Tanjil_v1.0 ID=rna-TanjilR_28495_La_Tanjil_v1.0; Name=rna-TanjilR_28495; organism=Lupinus angustifolius; type=CDS; length=1995bp; location=Sequence derived from: Chr_LG15-CM007375.1:18688199..18692748+ (Lupinus angustifolius
ATGGCGGTTTCCGATACTCCCAACGGTGCCGCTTTTACACCACCGCCCCC
ACCTACGCCAGAATACGGGATCACAAAGCCTATCTCTCTTGCCGGTCCCA
CCGATGCTGATTTCAACCGTAACCTAGAATTGGAGAAGTTCTTGGTTGAT
TCGGGGCTTTACGAGAGCGATGAAGAAACTGCAACTAGACAAGAGGTTCT
TCGCCGCCTTGATCAGGTTGTAAAAAGCTGGGTGAAGCAGTTGACACGCC
TGCGAGGCTACACAGATCAGATGGTTGAGGATGCAAATGCTGTGATTTTC
ACTTTTGGTTCTTATCGACTAGGGGTGCATGGGCCTGGAGCTGACATAGA
CACTTTGTGTGTTGGTCCTTCTTATGTGAATCGAGAGGAAGACTTCTTTA
TGCTTTTGCATAACATCCTCGCTGAAATGGAAGAAGTTACTGAACTCCAT
CCAGTTCCTGATGCACATGTCCCAGTAATGAAATTCAAGTTCCAGGGAAT
ATCTATAGATTTGCTGTATGCAAGCATATCTCATTTAGTTGTCCCAGAAG
ACCTGGATATCTCAGATGGTTCTGTTCTGCATGATGTTGACGAGCCAACT
GTTCGAAGTCTTAATGGCTGCCGTGTGGCAGATCAAATTCTTAAACTTGT
TCCAAATGTTGagCACTTCCGAACTGCACTGAGATGTTTAAAGTTTTGGG
CTAAAAGGCGTGGTGTTTATTCAAATGTTACCGGATTCCTTGGTGGTGTA
AATTGGGCCCTTTTGGTTGCTCGAGTTTGCCAGCTTTACCCAAATGCAAT
CCCTAGTATGTTGGTCACTCGATTCTTTAGGGTCTATACACAGTGGCGAT
GGCCTAACCCTGTAATGCTATGCTCTATTGAAGAAAATGAACTGGGTTTC
CCTATATGGGATCCTCGTAGAAACCCCCGAGACAGATTTCACATTATGCC
AATAATTACTCCTGCATACCCTTGCATGAATTCCAGTTACAATGTCTCAG
CAAGCACTCTTCGTGTTATGATGGAACAGTTACGCCATGGCAACAGGATC
TGTGACGAAATTGAGCTTAACAAAGCTCAGTGGAGTGCACTTTTCCAGCC
ATATCTATTTTTTGAGGCGTACAACAACTATTTACAAGTGGACATAATTG
CAGTAGACGCTGATGATTTACTACCGTGGAAGGGTTGGATAGAGTCTCGG
TTGAGACAGCTTACCCTCAAGATAGAACGGGATACGAATGGGATATTGCA
gtgtcatccttatcctcatgagTATGCAGATACATTGAAGCCTTGTGCac
attcttcatttttcatggGCTTGCAAAGGAAAGAGGGGGTAAAAGGTCAA
GAAGGCCAGCAATTTGATATACGTGGAACAGTTGATGAATTCAGACATGA
AATAAATATGTATGCATATTGGAAGCCAGGGATGGAAATTTATGTTTCTC
ATGTTCGTCGGAAGCAGCTCCCTGCATTTGTTTTTCCAGATGGTTATAGA
CGTACTCGGATTCCAAGACATATGAGCCATTTAGCTGAAAAAGCAGATGA
GGATGCTACAAAGTGCTATTCTGGGTCTGCTGAGAGATGCATCAAGAGGA
AAAATGACACTGAAATTATGGATGTGAAGCCAAGCAAACCAGAAAAACGA
GCCTCTGTTAGCCCACAGAGGCTAGAGTGTTTTTCTCCTGAAAGTTGTAC
CAGTAGATCAGGTGGTACATCTCAAATGAGTATTGATTGTATTGAAGGGG
TTAGGTTAGATGGTTCAACAATGAAAGATTCCGACAGCATTTGTGAAATT
AAGTCATCTGATAGTCTTGTAGGAAGTGCAATATGTGCTGAAAGACCTGA
CTTGCAGATTAGTGAAACAGGTGGTGTTGACTCCACATTTGATAGGCAGA
AATCAAGGAGTCCAGACGTTCAGAATGAGGTAAGCCTGTTGAACCAGTGG
AGCAACCTTCAATCAGGATGTTTTGGTTCATGTGAAGTTCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007010PolA_pol_RNA-bd_dom
IPR014492PolyA_polymerase
IPR007012PolA_pol_cen_dom
IPR002934Polymerase_NTP_transf_dom
IPR011068NuclTrfase_I-like_C
Vocabulary: Biological Process
TermDefinition
GO:0043631obsolete RNA polyadenylation
GO:0031123RNA 3'-end processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0004652obsolete polynucleotide adenylyltransferase activity
GO:0016779nucleotidyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus