rna-TanjilR_07865

Transcript Overview


Name	rna-TanjilR_07865
Unique Name	rna-TanjilR_07865_La_Tanjil_v1.0
Type	mRNA
Organism	Lupinus angustifolius (blue lupin)
Sequence length	2039
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_LG15-CM007375.1	supercontig	Chr_LG15-CM007375.1:19480329..19482367 +	Lupinus angustifolius L. Tanjil genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Lupinus angustifolius L. Tanjil genome v1.0	2019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.0	2020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot	2020-01-28

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ananL034	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL036	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL080	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananL262	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR293	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR298	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR308	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ancaiR0424	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaiR0435	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaR0375	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancaR0383	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancaR0414	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccR0473	Cajanus cajan Asha genome v1.0	Cajanus cajan
anccR0479	Cajanus cajan Asha genome v1.0	Cajanus cajan
ancrR0427	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR0432	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR0446	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ancrR0486	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
anpsR0326	Pisum sativum Cameor genome v1a	Pisum sativum
anpsR0338	Pisum sativum Cameor genome v1a	Pisum sativum
anpsR0346	Pisum sativum Cameor genome v1a	Pisum sativum
anpvR0406	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anpvR0407	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anpvR0448	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anvuR0363	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anvuR0370	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anasR0409	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasR0422	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasR0448	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasR0451	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anzwsR0372	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
anzwsR0394	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
antifR0379	Vicia faba cv. Tiffany genome v1.0	Vicia faba
antifR0389	Vicia faba cv. Tiffany genome v1.0	Vicia faba
antifR0395	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR0379	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifR0407	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR0390	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
anvrvR0357	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvrvR0375	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvuaR0330	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvuaR0341	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvuaR0351	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvssR0420	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
anvssR0436	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ancanR0334	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ancanR0342	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
anavjR0390	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR0396	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR0418	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR0421	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ancarR0368		Cicer arietinum
ancarR0383		Cicer arietinum
anccaR0336	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anccaR0357	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anvumR0392	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR0414	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR0423	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvvaR0390	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR0409	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR0416	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvasR0405	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0400	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0423	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0424	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0432	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvasR0435	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0431	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anpvfR0420	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anpvfR0422	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anvunR0343	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anpvfR0434	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anvunR0351	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anpvfR0463	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
XM_058925054.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Vigun09g211600.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vigst.02G059800.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
LR48_mrnaVigan04g220800	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Phvul.009G091300.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vigan.02G078600.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
rna-XM_014644366.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
rna-XM_004501296.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
rna-KK1_009411	Cajanus cajan Asha genome v1.0	Cajanus cajan
Vfaba.Hedin2.R1.2g182560.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Ca_01739	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Psat5g031480.1	Pisum sativum Cameor genome v1a	Pisum sativum
Cc_v2.0_06982.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
jg55349.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Psat05G0107400-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
Va04G063710.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vfaba.Tiffany.R1.2g147320.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Vigun09g211600.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Ca_14768.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
PvulFLAVERTChr09.1000586	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Cr_02971.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Vum_02G00641.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-TanjilG_07865	gene-TanjilG_07865_La_Tanjil_v1.0	Lupinus angustifolius	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_07865	rna-TanjilR_07865_La_Tanjil_v1.0-protein	Lupinus angustifolius	polypeptide
rna-TanjilR_07865_La_Tanjil_v1.0	rna-TanjilR_07865_La_Tanjil_v1.0	Lupinus angustifolius	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480329..19480417	rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480329..19480417	Lupinus angustifolius	exon
rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480512..19480555	rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480512..19480555	Lupinus angustifolius	exon
rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481577..19481685	rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481577..19481685	Lupinus angustifolius	exon
rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481878..19481935	rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481878..19481935	Lupinus angustifolius	exon
rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482038..19482154	rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482038..19482154	Lupinus angustifolius	exon
rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482233..19482367	rna-TanjilR_07865_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482233..19482367	Lupinus angustifolius	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480329..19480417	rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480329..19480417	Lupinus angustifolius	CDS
rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480512..19480555	rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19480512..19480555	Lupinus angustifolius	CDS
rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481577..19481685	rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481577..19481685	Lupinus angustifolius	CDS
rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481878..19481935	rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19481878..19481935	Lupinus angustifolius	CDS
rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482038..19482154	rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482038..19482154	Lupinus angustifolius	CDS
rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482233..19482367	rna-TanjilR_07865_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19482233..19482367	Lupinus angustifolius	CDS

Homology

[Close]

BLAST of rna-TanjilR_07865 vs. DB:Swiss
Match: Y4213_ARATH (ER membrane protein complex subunit 7 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g32130 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.264e-20
Identity = 74/156 (47.44%), Postives = 85/156 (54.49%), Query Frame = 3

Query: 1545 HSVPAGTHLIEVSALGYFFSPVDTQS*NYILFSSNNLLFFPMYA*LLYXXXXXXXXXXXXSARNPGKIQAALTETRRGLSEFVLEPLKGEQYYEVGRVLDLKFLFFIRMFA*CYYLVLLQIRQPFSIMSIVKSPXXXXXXXXXXXXXXXPKLMEGI 2012
            H VPAGTHLIEV ALGYFFSPV                                     VSAR+ GK+QA LTETRR L+E VLEPL+ EQYYE                          +R+PFS+MSIVKSPMGLM+GFM++VVF+MPKLME I
Sbjct:   79 HKVPAGTHLIEVYALGYFFSPVRVD----------------------------------VSARHRGKVQATLTETRRSLTELVLEPLRAEQYYE--------------------------MREPFSVMSIVKSPMGLMVGFMVVVVFLMPKLMENI 174

The following BLAST results are available for this feature:

BLAST of rna-TanjilR_07865 vs. DB:Swiss

BLAST of rna-TanjilR_07865 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
Y4213_ARATH	1.264e-20	47.44	ER membrane protein complex subunit 7 homolog OS=A...	[more]

InterPro

Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019008	Domain of unknown function DUF2012	PFAM	PF09430	DUF2012	coord: 57..157 e-value: 4.6E-17 score: 62.3
IPR013784	Carbohydrate-binding-like fold	SUPERFAMILY	49452	Starch-binding domain-like	coord: 32..110

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_LG15-CM007375.1:19480329..19482367+
coding sequence from alignment at Chr_LG15-CM007375.1:19480329..19482367+

mRNA sequence

>rna-TanjilR_07865_La_Tanjil_v1.0 ID=rna-TanjilR_07865_La_Tanjil_v1.0; Name=rna-TanjilR_07865; organism=Lupinus angustifolius; type=mRNA; length=2039bp
ATGGCTTCCACAATTCGATTATTCAAATCACTGatccttttcattttctc
acTCTTACCCCTTTCATTCGCTCAATCTTCTACCTCTGGGTATCAATTCT
ACATTCCCTAAACCCTAATAATGATTCATTCTCttttattgatattgatt
ttaatttgttCCAACCAATGTGATTTTTTGCAGATTTTCCGATGGTTACA
CCATCTACGGTCGAGTCAAGATCCCTAGTATGCTCTCttattttctatca
tatttTACAGTAtccgatttttatttaatttatagtcCAATTATAGGTTG
ATgtttaatttgattatataaatTCTCTGCAACTAATTTTTGATTGATAA
AATTTTCCAACTTCAATCTGTAAATGAAGGGTGTCCATGTCGTGATATGT
CTTAAGATGCTATTTGTTATGTGTGTCATTAAGGTTGATTTGGAAGTGTT
GATGAGACTGGTAATTGTAATTGTGTAATCAATCGGTTCAAGTTGTTTAT
ATGGTTTCACGAATTCACCCGTTAAGTGTGATTCGAAGGTTACATAGTTT
AAAGCTTTTGCTGGATTATGGTATAGTCAAGGTATCCCCTCCCcatatgg
gtaaggaactaacgCTTTCAGGGATTTGGAATACTGTACAGGGTTAGGCC
CAAAGAAAGTTTTAAAATGTGTCATCTTTTGATGGTTTTGCTTTAATGCA
CCATTTTATGCATGTGTTGCTCATTATTCTGTTTTGTATGCTAATTCAAT
CGATAAATTAAGCTTTCTTGTATTGTTCCCAACTCTTTTCGTCTTGCACT
GTAtgctccttttctttttaaattgttGTGCAAATAgaatttcttctcat
ttttagcAGGCAAAATTTCATGTGGCAAAACTTTTAAAACCTCGcatttt
aattaacaaaataaatggtTTTAAGCTTGTTATTTGATCTTTTCCTTTCA
TCAAATTAACAGTTGTAAACTTGTAATCAGAAGAGTGTTCAGAACTTGCA
AGGATCTTTTGTCATTGACAAAGTATATATGATTGTGTTAGCACGGATTT
AGGGGAGTTGATGGTTTGTTAAAATCTGTTGTAGGATGAttcaaagttta
ttttttactGTGAGGTTGAAATGCCAAAACTTAATGGTTATCAATTTATC
ATCCTTAGTGCATACTGCTTGTTGAAACCTTTATCTGGCTGCACATGGAT
CTGTGATAGATATTGTTGTATGATGCTATTGGTAAATCTTTTTGGCAGGT
ACTGGAACAAATGAATTTATTCTTCCCGGAAAAGTTTCAAATGTCAAAGT
CATACTCAATGGTGGTCAAAGAGTTACTCTTCTGAGGCCTGATGGATATT
TTTCATTGTATCCTTTGATTTACAACTTCATTTTGACTTCTATTTAATCT
GCATTACaacattttttggtacattaaactttatttaatattattttccc
TCCTTTTCCTGTTCTTGATTTTGAGAAGTCATAGTTAATGCTGGTAAATC
ATTGTTAAGAGACAATGTAGTTCCTTAATCTGTATGGTTTAAGCCACAGT
GTACCTGCAGGGACTCATCTAATTGAAGTGTCTGCATTAGGCTATTTCTT
TTCTCCGGTGGATACTCAATCttgaaattacattttattttcctCTAATA
ATTTACTGTTTTTTCCTATGTatgcttaattattatattgttgtgATGTT
TGAAAAAAGGTACGAGTTGATGTTAGTGCCAGAAACCCTGGCAAAATTCA
GGCAGCACTGACAGAAACTAGGAGGGGGCTCAGTGAGTTTGTTTTAGAGC
CATTGAAGGGTGAACAGTATTACGAGGTTGGTCGAGTCTTAGACTTAAAA
TTCCTATTTTTCATCCGAATGTTTGCGTGATGTTATTATCTGGTTTTATT
ACAGATTAGGCAACCATTCTCTATTATGTCCATTGTGAAAAGTCCAATGG
GTCTGATGATGGGATTTATGCTGCTTGTTGTCTTCGTCATGCCCAAGTTA
ATGGAGGGTATTGGTATGTGTTCTAAAATTCATCTGTAA

protein sequence of rna-TanjilR_07865_La_Tanjil_v1.0

>rna-TanjilR_07865_La_Tanjil_v1.0 ID=rna-TanjilR_07865_La_Tanjil_v1.0; Name=rna-TanjilR_07865_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=183bp
MASTIRLFKSLILFIFSLLPLSFAQSSTSGFSDGYTIYGRVKIPSTGTNE
FILPGKVSNVKVILNGGQRVTLLRPDGYFSFVPAGTHLIEVSALGYFFSP
VRVDVSARNPGKIQAALTETRRGLSEFVLEPLKGEQYYEIRQPFSIMSIV
KSPMGLMMGFMLLVVFVMPKLMEGIGMCSKIHL

mRNA from alignment at Chr_LG15-CM007375.1:19480329..19482367+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-TanjilR_07865_La_Tanjil_v1.0 ID=rna-TanjilR_07865_La_Tanjil_v1.0; Name=rna-TanjilR_07865; organism=Lupinus angustifolius; type=mRNA; length=2039bp; location=Sequence derived from: Chr_LG15-CM007375.1:19480329..19482367+ (Lupinus angustifolius
ATGGCTTCCACAATTCGATTATTCAAATCACTGatccttttcattttctc
acTCTTACCCCTTTCATTCGCTCAATCTTCTACCTCTGGGTATCAATTCT
ACATTCCCTAAACCCTAATAATGATTCATTCTCttttattgatattgatt
ttaatttgttCCAACCAATGTGATTTTTTGCAGATTTTCCGATGGTTACA
CCATCTACGGTCGAGTCAAGATCCCTAGTATGCTCTCttattttctatca
tatttTACAGTAtccgatttttatttaatttatagtcCAATTATAGGTTG
ATgtttaatttgattatataaatTCTCTGCAACTAATTTTTGATTGATAA
AATTTTCCAACTTCAATCTGTAAATGAAGGGTGTCCATGTCGTGATATGT
CTTAAGATGCTATTTGTTATGTGTGTCATTAAGGTTGATTTGGAAGTGTT
GATGAGACTGGTAATTGTAATTGTGTAATCAATCGGTTCAAGTTGTTTAT
ATGGTTTCACGAATTCACCCGTTAAGTGTGATTCGAAGGTTACATAGTTT
AAAGCTTTTGCTGGATTATGGTATAGTCAAGGTATCCCCTCCCcatatgg
gtaaggaactaacgCTTTCAGGGATTTGGAATACTGTACAGGGTTAGGCC
CAAAGAAAGTTTTAAAATGTGTCATCTTTTGATGGTTTTGCTTTAATGCA
CCATTTTATGCATGTGTTGCTCATTATTCTGTTTTGTATGCTAATTCAAT
CGATAAATTAAGCTTTCTTGTATTGTTCCCAACTCTTTTCGTCTTGCACT
GTAtgctccttttctttttaaattgttGTGCAAATAgaatttcttctcat
ttttagcAGGCAAAATTTCATGTGGCAAAACTTTTAAAACCTCGcatttt
aattaacaaaataaatggtTTTAAGCTTGTTATTTGATCTTTTCCTTTCA
TCAAATTAACAGTTGTAAACTTGTAATCAGAAGAGTGTTCAGAACTTGCA
AGGATCTTTTGTCATTGACAAAGTATATATGATTGTGTTAGCACGGATTT
AGGGGAGTTGATGGTTTGTTAAAATCTGTTGTAGGATGAttcaaagttta
ttttttactGTGAGGTTGAAATGCCAAAACTTAATGGTTATCAATTTATC
ATCCTTAGTGCATACTGCTTGTTGAAACCTTTATCTGGCTGCACATGGAT
CTGTGATAGATATTGTTGTATGATGCTATTGGTAAATCTTTTTGGCAGGT
ACTGGAACAAATGAATTTATTCTTCCCGGAAAAGTTTCAAATGTCAAAGT
CATACTCAATGGTGGTCAAAGAGTTACTCTTCTGAGGCCTGATGGATATT
TTTCATTGTATCCTTTGATTTACAACTTCATTTTGACTTCTATTTAATCT
GCATTACaacattttttggtacattaaactttatttaatattattttccc
TCCTTTTCCTGTTCTTGATTTTGAGAAGTCATAGTTAATGCTGGTAAATC
ATTGTTAAGAGACAATGTAGTTCCTTAATCTGTATGGTTTAAGCCACAGT
GTACCTGCAGGGACTCATCTAATTGAAGTGTCTGCATTAGGCTATTTCTT
TTCTCCGGTGGATACTCAATCttgaaattacattttattttcctCTAATA
ATTTACTGTTTTTTCCTATGTatgcttaattattatattgttgtgATGTT
TGAAAAAAGGTACGAGTTGATGTTAGTGCCAGAAACCCTGGCAAAATTCA
GGCAGCACTGACAGAAACTAGGAGGGGGCTCAGTGAGTTTGTTTTAGAGC
CATTGAAGGGTGAACAGTATTACGAGGTTGGTCGAGTCTTAGACTTAAAA
TTCCTATTTTTCATCCGAATGTTTGCGTGATGTTATTATCTGGTTTTATT
ACAGATTAGGCAACCATTCTCTATTATGTCCATTGTGAAAAGTCCAATGG
GTCTGATGATGGGATTTATGCTGCTTGTTGTCTTCGTCATGCCCAAGTTA
ATGGAGGGTATTGGTATGTGTTCTAAAATTCATCTGTAA

Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:19480329..19482367+

>rna-TanjilR_07865_La_Tanjil_v1.0 ID=rna-TanjilR_07865_La_Tanjil_v1.0; Name=rna-TanjilR_07865; organism=Lupinus angustifolius; type=CDS; length=552bp; location=Sequence derived from: Chr_LG15-CM007375.1:19480329..19482367+ (Lupinus angustifolius
ATGGCTTCCACAATTCGATTATTCAAATCACTGatccttttcattttctc
acTCTTACCCCTTTCATTCGCTCAATCTTCTACCTCTGGATTTTCCGATG
GTTACACCATCTACGGTCGAGTCAAGATCCCTAGTACTGGAACAAATGAA
TTTATTCTTCCCGGAAAAGTTTCAAATGTCAAAGTCATACTCAATGGTGG
TCAAAGAGTTACTCTTCTGAGGCCTGATGGATATTTTTCATTTGTACCTG
CAGGGACTCATCTAATTGAAGTGTCTGCATTAGGCTATTTCTTTTCTCCG
GTACGAGTTGATGTTAGTGCCAGAAACCCTGGCAAAATTCAGGCAGCACT
GACAGAAACTAGGAGGGGGCTCAGTGAGTTTGTTTTAGAGCCATTGAAGG
GTGAACAGTATTACGAGATTAGGCAACCATTCTCTATTATGTCCATTGTG
AAAAGTCCAATGGGTCTGATGATGGGATTTATGCTGCTTGTTGTCTTCGT
CATGCCCAAGTTAATGGAGGGTATTGGTATGTGTTCTAAAATTCATCTGT
AA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019008	EMC7_beta_sandwich
IPR013784	Carb-bd-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0030246	carbohydrate binding

Search form

rna-TanjilR_07865