rna-TanjilR_09871
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana OX=3702 GN=FDH PE=1 SV=2) HSP 1 Score: 372.474 bits (955), Expect = 2.543e-116 Identity = 170/214 (79.44%), Postives = 199/214 (92.99%), Query Frame = 1 Query: 871 QVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVF 1512 +V++E+FIE+ARKSGKF+E +L F+KRIL +SGIGDETY+P++ ISS+EN TMKEGR EAS V+FGALDELFEKTR++PKD+GVLVVNCSIFNPTPSLSAM+INHYKMRGNILSYNLGGMGCSAGIIA+DLARD+LQSNPN+YAVVVSTEMVG+NWY G ++SM+IPNCFFRMGCSA++LSNRRRD+ KYRLEHIVRTHK ADDRSFR V+ Sbjct: 136 KVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPRS-ISSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLSAMVINHYKMRGNILSYNLGGMGCSAGIIAIDLARDMLQSNPNSYAVVVSTEMVGYNWYVGSDKSMVIPNCFFRMGCSAVMLSNRRRDFRHAKYRLEHIVRTHKAADDRSFRSVY 348 HSP 2 Score: 300.827 bits (769), Expect = 1.826e-89 Identity = 143/206 (69.42%), Postives = 165/206 (80.10%), Query Frame = 1 Query: 2506 RCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNK-------------KSDGNNLASS--KKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPWLDCINTYPVSL 3078 R VYQEED+Q FKGLKIS+DL+E+GG+ALKTNITTLGPLVLPFSEQLLFF L R + K K++G +SS KPYIPDYKLAFEHFC HAASK +L+ELQ+NL LS+ NMEASRMTLHRFGNTSSS IWYELAY+EAKE V++GDR+WQ+AFGSGFKCNSVVW+AMR+ K +RNNPW+DCIN YPV L Sbjct: 345 RSVYQEEDEQGFKGLKISRDLMEVGGEALKTNITTLGPLVLPFSEQLLFFAALLRRTFSPAAKTSTTTSFSTSATAKTNGIKSSSSDLSKPYIPDYKLAFEHFCFHAASKVVLEELQKNLGLSEENMEASRMTLHRFGNTSSSGIWYELAYMEAKESVRRGDRVWQIAFGSGFKCNSVVWKAMRKVKKPTRNNPWVDCINRYPVPL 550 HSP 3 Score: 203.756 bits (517), Expect = 9.560e-55 Identity = 105/137 (76.64%), Postives = 120/137 (87.59%), Query Frame = 1 Query: 4 ASERDLFSTEIVNRGIESTGPNAGSMTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLSKEDLWKKLWQDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDELKV 414 ++E+DL STEIVNRGIE +GPNAGS TFSVRVRRRLPDFLQSVNLKYVKLGYHYLINH +YL TIP+L++VFSAEVGSLS+E++WKKLW YDLATV+ FGVFV T VYFMSRPR +YLID+ACY+P DE KV Sbjct: 4 SNEQDLLSTEIVNRGIEPSGPNAGSPTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAVYLATIPVLVLVFSAEVGSLSREEIWKKLWD---YDLATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKV 137
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana OX=3702 GN=KCS4 PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 1.789e-81 Identity = 129/209 (61.72%), Postives = 166/209 (79.43%), Query Frame = 1 Query: 886 QFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVF 1512 +F+E +R +G F++ +LEFQ++IL SG+G++TY+P+A + +M R EA VMFGALD LF T ++PKDIG+LVVNCS+FNPTPSLSAMI+N YK+RGNI SYNLGGMGCSAG+IAVDLA+D+L + N YAVVVSTE + NWY G ++SMLIPNC FR+G SA+LLSN+ RD R KYRL H+VRTH+GADD++FR V+ Sbjct: 132 RFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPEA-MHYVPPRISMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDMLLVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYRLVHVVRTHRGADDKAFRCVY 339 HSP 2 Score: 261.536 bits (667), Expect = 1.612e-75 Identity = 119/192 (61.98%), Postives = 149/192 (77.60%), Query Frame = 1 Query: 2506 RCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPWLDCINTYPVSLT 3081 RCVYQE+DD G+ +SKDL+ I G+ LKTNITTLGPLVLP SEQ+LFF TL + LF K PYIPD+KLAFEHFC+HA + ++DEL++NL+LS ++EASRMTLHRFGNTSSSSIWYELAY+EAK R+++G+R+WQ+AFGSGFKCNS +W A+R K S N+PW DCI+ YPV+L+ Sbjct: 336 RCVYQEQDDTGRTGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQILFFMTLVVKKLFNGKVK-----------PYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRH-VKPSNNSPWEDCIDKYPVTLS 515 HSP 3 Score: 104.76 bits (260), Expect = 5.424e-22 Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 91 VRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLSKEDLWKKLWQDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDELK 411 +R R LPDFLQSVNLKYVKLGYHYLI++ + L P L VV S E ++ +DL K+LW Y+L +++ + VF +VY M+RPRP+YL+D++CY P D LK Sbjct: 23 IRQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFP-LAVVISVEASQMNPDDL-KQLWIHLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLK 127
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana OX=3702 GN=KCS1 PE=1 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 2.512e-81 Identity = 124/214 (57.94%), Postives = 171/214 (79.91%), Query Frame = 1 Query: 871 QVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVF 1512 ++S + F+ + ++G F + +++FQ+RI +G+GDETY+P+ I+ST M E RAEA VMFGALD LFEKT I+P ++G+L+VNCS+FNPTPSLSAMI+NHYKMR +I SYNLGGMGCSAG+I++DLA ++L++NPN+YAVVVSTE + NWY G +RSML+ NC FRMG +A+LLSNRR+D + KY L ++VRTHKG+DD+++ V+ Sbjct: 137 KISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRG-ITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVY 349 HSP 2 Score: 241.121 bits (614), Expect = 5.034e-68 Identity = 110/191 (57.59%), Postives = 142/191 (74.35%), Query Frame = 1 Query: 2509 CVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRR-ATKGSRNNPWLDCINTYPVSL 3078 CVYQ+ED++ G+ ++++L+ + GDALKTNITTLGP+VLP SEQL+F +L R +F KPYIPD+KLAFEHFC+HA + +LDE+Q+NL+L D +ME SRMTLHRFGNTSSSS+WYE+AY EAK RVK GDR+WQ+AFGSGFKCNS VW+A+R +T+ N W I+ YPV + Sbjct: 347 CVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMF-----------KLKVKPYIPDFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKV 526 HSP 3 Score: 77.7962 bits (190), Expect = 2.111e-13 Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 91 VRVRRRLPDFLQSVNLKYVKLGYHYLINHG---IYLLTIPLLLVVFSAEVGSLSKEDLWKKLW--QDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDELKV 414 +R+RRRLPD L SV LKYVKLG H N +L+ +PL V G D + +LW Q D AT LT F ++Y +R +P+YL+D++CY+PEDE K+ Sbjct: 28 IRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTG--LTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKI 138
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana OX=3702 GN=KCS11 PE=1 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 4.936e-80 Identity = 123/210 (58.57%), Postives = 163/210 (77.62%), Query Frame = 1 Query: 871 QVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSF 1500 + +++ F++ ++ +G F E +LEFQ++IL SG+G+ TY+P+AV++ N MKE R EA VMFGA+DEL KT + PKDIG+L+VNCS+FNPTPSLSAM++NHYK+RGNILSYNLGGMGCSAG+I++DLA+ +L S PN YA+V+S E + NWY G +RS L+ NC FRMG +A+LLSN+R D R KY L VRTHKGADD+ F Sbjct: 115 KCTKKIFMDRSKLTGSFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPC-MKEARKEAETVMFGAIDELLAKTNVNPKDIGILIVNCSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLHSIPNTYAMVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNKRWDRRRSKYELVDTVRTHKGADDKCF 323 HSP 2 Score: 251.521 bits (641), Expect = 5.916e-72 Identity = 117/190 (61.58%), Postives = 142/190 (74.74%), Query Frame = 1 Query: 2509 CVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPWLDCINTYPVSL 3078 C+ QEED G+ +SK+L+ + GDALKTNITTLGPLVLP SEQLLFF TL R LF KPYIPD+KLAFEHFC+HA + +LDEL++NL+L++ +ME SRMTL+RFGNTSSSS+WYELAY EAK R+KKGDRIWQ+AFGSGFKCNS VWRA+R NPW+D I+ +PV + Sbjct: 325 CITQEEDSASKIGVTLSKELMAVAGDALKTNITTLGPLVLPTSEQLLFFATLVGRKLF-----------KMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRIWQIAFGSGFKCNSSVWRAVRSVNPKKEKNPWMDEIHEFPVEV 503 HSP 3 Score: 106.686 bits (265), Expect = 1.471e-22 Identity = 51/107 (47.66%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 103 RRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLSKEDLWKKLWQDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDELKVKTK 423 R LPDF +SV LKYVKLGYHYLI HG+YL PL+LV+ +A++ + S DL + LW+ Y+L +V+ + VF ++YFM+RPRP+YL++++C++P++ K K Sbjct: 15 RNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVLVI-AAQISTFSVTDL-RSLWEHLQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDESRKCTKK 119
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS2_ARATH (3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana OX=3702 GN=KCS2 PE=2 SV=2) HSP 1 Score: 273.863 bits (699), Expect = 8.239e-80 Identity = 125/212 (58.96%), Postives = 163/212 (76.89%), Query Frame = 1 Query: 877 SREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVF 1512 +RE F++ +++ G F E +L FQ++IL SG+G +TY P+A++ N M E R EA VMFGA+D + EKT + PKDIG+LVVNCS+FNPTPSLSAMI+N YK+RGN+LSYNLGGMGCSAG+I++DLA+ +LQ PN+YA+VVSTE + NWY G +RSML+ NC FRMG +A+LLSNR D R KY+L H VRTHKG+DD +F V+ Sbjct: 122 TRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPC-MSEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVY 332 HSP 2 Score: 249.21 bits (635), Expect = 5.652e-71 Identity = 119/196 (60.71%), Postives = 146/196 (74.49%), Query Frame = 1 Query: 2509 CVYQEED--DQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRR----ATKGSRNNPWLDCINTYPVSL 3078 CVYQ ED D K G+ +SK+L+ I G+ALKTNITTLGPLVLP SEQLLFF TL R +F K KPYIPD+KLAFEHFC+HA + +LDE+++NL+LS+ +ME SRMTL+RFGNTSSSS+WYELAY EAK R+K+GDR WQ+AFGSGFKCNS VWRA+R K + NPW+D I+ +PV + Sbjct: 330 CVYQREDNDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVKKI----------KPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKEKKKKTNPWIDEIHEFPVPV 515 HSP 3 Score: 79.337 bits (194), Expect = 6.629e-14 Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 103 RRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLSKEDLWKKLWQDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDEL 408 ++LP+FL SV LKYVKLGYHYLI++ +Y+L +P+ L+ +A S S DL + + + +F ++YF +RPR I+L+D+ACY+P+ L Sbjct: 20 KKLPNFLLSVRLKYVKLGYHYLISNAVYILILPVGLL--AATSSSFSLTDLTLLYNHLLKFHFLSSTLFAALLIFLTTLYFTTRPRRIFLLDFACYKPDSSL 119
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana OX=3702 GN=KCS9 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.501e-78 Identity = 126/220 (57.27%), Postives = 167/220 (75.91%), Query Frame = 1 Query: 871 QVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVFANAASN 1530 QV ++F++ ++ F E SLEFQ++IL SG+G+ETY+P+A + TM R E+ VMFGALD+LFE T+I P+DIGVLVVNCS+FNPTPSLSAMI+N YK+RGN+ S+NLGGMGCSAG+I++DLA+D+LQ + N YAVVVSTE + NWY G +++MLIPNC FR+G SA+LLSN+ +D R KY+L H VRTHKGA +++F V+ N Sbjct: 123 QVKYQKFMDHSKLIEDFNESSLEFQRKILERSGLGEETYLPEA-LHCIPPRPTMMAAREESEQVMFGALDKLFENTKINPRDIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNVKSFNLGGMGCSAGVISIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKAMLIPNCLFRVGGSAILLSNKGKDRRRSKYKLVHTVRTHKGAVEKAFNCVYQEQDDN 341 HSP 2 Score: 253.447 bits (646), Expect = 1.124e-72 Identity = 118/190 (62.11%), Postives = 145/190 (76.32%), Query Frame = 1 Query: 2509 CVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPWLDCINTYPVSL 3078 CVYQE+DD G+ +SKDL+ I G+ALK NITTLGPLVLP SEQ+LFF TL + LF S KPYIPD+KLAF+HFC+HA + ++DEL++NL+LS ++EASRMTLHRFGNTSSSSIWYELAY+EAK R+KKG+R+WQ+AFGSGFKCNS VW A+ K S ++PW CI+ YPV L Sbjct: 333 CVYQEQDDNGKTGVSLSKDLMAIAGEALKANITTLGPLVLPISEQILFFMTLVTKKLFNS-----------KLKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLSQTHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMKKGNRVWQIAFGSGFKCNSAVWVALNN-VKPSVSSPWEHCIDRYPVKL 510 HSP 3 Score: 105.531 bits (262), Expect = 3.080e-22 Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 100 RRRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLSKEDLWKKLWQDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDELKVK 417 RR+LP+FLQSVN+KYVKLGYHYLI H L +PL+ V+ + E+ L+ +DL+ ++W Y+L + + +F +VY MSRPR +YL+DY+CY P + L+VK Sbjct: 22 RRKLPNFLQSVNMKYVKLGYHYLITHLFKLCLVPLMAVLVT-EISRLTTDDLY-QIWLHLQYNLVAFIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVK 125
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana OX=3702 GN=KCS17 PE=1 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 9.286e-77 Identity = 126/214 (58.88%), Postives = 163/214 (76.17%), Query Frame = 1 Query: 871 QVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVF 1512 +VS ++F+ + F E SLEFQ++IL+ SG+G+ETY+P + I S TM R EA V+FGALD LFE T+I P++IGVLVVNCS+FNPTPSLSAMI+N YK+RGNI S+NLGGMGCSAG+IAVDLA D+LQ + N +A+VVSTE + NWY G +++MLIPNC FR+G SA+LLSN+ D R KY+L H VRTHKG+D+ +F V+ Sbjct: 97 KVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYLPDS-IHSIPPRPTMAAAREEAEQVIFGALDNLFENTKINPREIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNIKSFNLGGMGCSAGVIAVDLASDMLQIHRNTFALVVSTENITQNWYFGNKKAMLIPNCLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVY 309 HSP 2 Score: 251.906 bits (642), Expect = 2.542e-72 Identity = 115/190 (60.53%), Postives = 146/190 (76.84%), Query Frame = 1 Query: 2509 CVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPWLDCINTYPVSL 3078 CVYQE+D+ G+ +SKDL+ I G+ALKTNIT+LGPLVLP SEQ+LFF T + LF KK KPYIPD+KLA +HFC+HA + ++DEL+++L+LS +++EASRMTLHRFGNTSSSSIWYELAY EAK R++KG+R+WQ+AFGSGFKCNS VW A+R + S NNPW CI+ YPV + Sbjct: 307 CVYQEQDECLKTGVSLSKDLMAIAGEALKTNITSLGPLVLPISEQILFFATFVAKRLFNDKKK----------KPYIPDFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWVALRN-VEPSVNNPWEHCIHRYPVKI 485 HSP 3 Score: 64.3142 bits (155), Expect = 3.534e-9 Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 142 YVKLGYHYLINHGIYLLTIPLLLVVF-SAEVGSLSKEDLWKKLWQDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDELKV 414 YVKLGYHYLI H L+ +PL+ V+F + + SL+ L+ Y+ + + + V+FMSRPR IYL+DY+CY P KV Sbjct: 15 YVKLGYHYLITHFFKLMFLPLMAVLFMNVSLLSLNHLQLY--------YNSTGFIFVITLAIVGSIVFFMSRPRSIYLLDYSCYLPPSSQKV 98
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS20_ARATH (3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana OX=3702 GN=KCS20 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 2.083e-76 Identity = 129/218 (59.17%), Postives = 168/218 (77.06%), Query Frame = 1 Query: 877 SREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVFANAASN 1530 +RE F++ +++ G F E +L FQ++IL SG+G +TY P+A++ N M+E R EA VMFGA+D + EKT ++PKDIG+LVVNCS+FNPTPSLSAMI+N YK+RGNILSYNLGGMGCSAG+I++DLA+ +LQ PN+YA+VVSTE + NWY G +RSML+ NC FRMG +A+LLSNR D SR KY+L H VRTHKGADD +F V+ +N Sbjct: 128 TRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPC-MEEARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNLGGMGCSAGLISIDLAKQMLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDNN 344 HSP 2 Score: 243.432 bits (620), Expect = 7.566e-69 Identity = 115/195 (58.97%), Postives = 145/195 (74.36%), Query Frame = 1 Query: 2509 CVYQEEDDQKFK----GLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATK-GSRNNPWLDCINTYPVSL 3078 CVYQ ED+ + G+ +SK+L+ I G+ALKTNITTLGPLVLP SEQLLFF TL R +F K KPYIPD+KLAFEHFC+HA + +LDE+++NL+LS+ +ME SRMTL+RFGNTSSSS+WYELAY EAK R+K+GDR WQ+AFGSGFKCNS VW+A+R + NPW+D I+ +PV + Sbjct: 336 CVYQREDNNAEETGKIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKI----------KPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIDPMDEKTNPWIDEIDDFPVQV 520
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana OX=3702 GN=CUT1 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 1.289e-75 Identity = 122/214 (57.01%), Postives = 165/214 (77.10%), Query Frame = 1 Query: 871 QVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFVF 1512 +V F+E +R K + S+EFQ RIL SG+G+ET +P A I T TM R+EA MV+F A+D+LF+KT ++PKD+ +L+VNCS+F+PTPSLSAM+IN YK+R NI S+NL GMGCSAG+I+VDLARD+LQ +PN+ A++VSTE++ N+YQG ER+ML+PNC FRMG +A+ +SNRR D R KY+L H+VRTH+GADD+SF V+ Sbjct: 104 RVPFATFMEHSRLILKDKPKSVEFQMRILERSGLGEETCLPPA-IHYIPPTPTMDAARSEAQMVIFEAMDDLFKKTGLKPKDVDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLQVHPNSNAIIVSTEIITPNYYQGNERAMLLPNCLFRMGAAAIHMSNRRSDRWRAKYKLSHLVRTHRGADDKSFYCVY 316 HSP 2 Score: 245.358 bits (625), Expect = 7.230e-70 Identity = 110/188 (58.51%), Postives = 142/188 (75.53%), Query Frame = 1 Query: 2509 CVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPWLDCINTYPV 3072 CVY++ED + G+ +SKDL+ I G+ALK NITT+GPLVLP SEQLLF +L R +F K PYIPD+KLAFEHFC+HA + ++DELQ+NL+LS ++EASRMTLHRFGNTSSSS+WYEL+Y+E+K R+++GDR+WQ+AFGSGFKCNS VW+ R K ++ PW DCI+ YPV Sbjct: 314 CVYEQEDKEGHVGINLSKDLMAIAGEALKANITTIGPLVLPASEQLLFLTSLIGRKIFNPKWK-----------PYIPDFKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIESKGRMRRGDRVWQIAFGSGFKCNSAVWKC-NRTIKTPKDGPWSDCIDRYPV 489 HSP 3 Score: 84.3445 bits (207), Expect = 1.762e-15 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 109 LPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLSKEDLWKKLWQDASYDLAXXXXXXXXXXXXXXXYFMSRPRPIYLIDYACYRPEDELKVKTKT 426 +P+F SV LKYVKLGY YL+NH + L IP++ +V + E+ + E++ +W +DL VL S +F +VYFMS+PR IYL+DY+CY+P +V T Sbjct: 6 MPEFSSSVKLKYVKLGYQYLVNHFLSFLLIPIMAIV-AVELLRMGPEEIL-NVWNSLQFDLVQVLCSSFFVIFISTVYFMSKPRTIYLVDYSCYKPPVTCRVPFAT 109
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana OX=3702 GN=KCS15 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.685e-73 Identity = 113/213 (53.05%), Postives = 161/213 (75.59%), Query Frame = 1 Query: 871 QVSREQFIEVARKSGKFEEGSLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRGKYRLEHIVRTHKGADDRSFRFV 1509 ++++ FIE+A KSG F E ++E Q+++L SGIG+E+Y+P+ V +++GR EA+MV+FGA+DEL T+I K I +LV+NC + N TPSLSAM+INHYK+R N SYNLGGMGCSAG+IA+DLA+D+L ++ +YA+VVSTE+V F WY G + ++L PNCFFRMG +A++LS+RR D R KY+L +VRTHKG +D S++ + Sbjct: 103 KITKSDFIELAMKSGNFNETAIELQRKVLDQSGIGEESYMPRVVFKPGHRV-NLRDGREEAAMVIFGAIDELLAATKINVKHIKILVLNCGVLNTTPSLSAMVINHYKLRHNTESYNLGGMGCSAGVIAIDLAKDLLNAHQGSYALVVSTEIVSFTWYSGNDVALLPPNCFFRMGAAAVMLSSRRIDRWRAKYQLMQLVRTHKGMEDTSYKSI 314 HSP 2 Score: 155.606 bits (392), Expect = 3.936e-39 Identity = 80/174 (45.98%), Postives = 105/174 (60.34%), Query Frame = 1 Query: 2524 EDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGSNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRATKGSRNNPW 3045 ED +GL +S+D++E+G ALK NI TLG L +P +FEH CV A+SK +LD++ ++L+L++ NMEASR TL RFGNTSSSSIWYELAYLE K ++K+GDR+WQ+ FGSGFKCNSVVW+A++ NNPW Sbjct: 318 EDRDGKQGLYVSRDVMEVGRHALKANIATLGRL-----------------------------------EP-------SFEHICVLASSKKVLDDIHKDLKLTEENMEASRRTLERFGNTSSSSIWYELAYLEHKAKMKRGDRVWQIGFGSGFKCNSVVWKALKNIDPPRHNNPW 449 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_09871 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_09871_La_Tanjil_v1.0 ID=rna-TanjilR_09871_La_Tanjil_v1.0; Name=rna-TanjilR_09871; organism=Lupinus angustifolius; type=mRNA; length=3084bpback to top protein sequence of rna-TanjilR_09871_La_Tanjil_v1.0 >rna-TanjilR_09871_La_Tanjil_v1.0 ID=rna-TanjilR_09871_La_Tanjil_v1.0; Name=rna-TanjilR_09871_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=538bpback to top mRNA from alignment at Chr_LG15-CM007375.1:19738510..19741593- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_09871_La_Tanjil_v1.0 ID=rna-TanjilR_09871_La_Tanjil_v1.0; Name=rna-TanjilR_09871; organism=Lupinus angustifolius; type=mRNA; length=3084bp; location=Sequence derived from: Chr_LG15-CM007375.1:19738510..19741593- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:19738510..19741593- >rna-TanjilR_09871_La_Tanjil_v1.0 ID=rna-TanjilR_09871_La_Tanjil_v1.0; Name=rna-TanjilR_09871; organism=Lupinus angustifolius; type=CDS; length=1617bp; location=Sequence derived from: Chr_LG15-CM007375.1:19738510..19741593- (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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