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Transcript Overview
Name | rna-TanjilR_09862 |
Unique Name | rna-TanjilR_09862_La_Tanjil_v1.0 |
Type | mRNA |
Organism | Lupinus angustifolius (blue lupin) |
Sequence length | 3141 |
Product | hypothetical protein |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_09862 | rna-TanjilR_09862_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
rna-TanjilR_09862_La_Tanjil_v1.0 | rna-TanjilR_09862_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19814702..19814923 | rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19814702..19814923 | Lupinus angustifolius | exon |
rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19815204..19815521 | rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19815204..19815521 | Lupinus angustifolius | exon |
rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817233..19817328 | rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817233..19817328 | Lupinus angustifolius | exon |
rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817448..19817515 | rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817448..19817515 | Lupinus angustifolius | exon |
rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817722..19817842 | rna-TanjilR_09862_La_Tanjil_v1.0-exon-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817722..19817842 | Lupinus angustifolius | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19814702..19814923 | rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19814702..19814923 | Lupinus angustifolius | CDS |
rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19815204..19815521 | rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19815204..19815521 | Lupinus angustifolius | CDS |
rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817233..19817328 | rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817233..19817328 | Lupinus angustifolius | CDS |
rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817448..19817515 | rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817448..19817515 | Lupinus angustifolius | CDS |
rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817722..19817842 | rna-TanjilR_09862_La_Tanjil_v1.0-CDS-Chr_LG15-CM007375.1_La_Tanjil_v1.0-1579734366:19817722..19817842 | Lupinus angustifolius | CDS |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_09862_La_Tanjil_v1.0 ID=rna-TanjilR_09862_La_Tanjil_v1.0; Name=rna-TanjilR_09862; organism=Lupinus angustifolius; type=mRNA; length=3141bp ATGTTCACCTCTCTTTACAGCGGCTTCCTCCGCCGTTGCTTCAGGGCGGC CGGACTCTCCTCTCAATCCATTGACCTAGATGATAAAACCACCCTCCACT ACTGGGGTCCCACAGAAAtatccaaaacccaaaaaccttcCCTAGTTCTT ATCCATGGGTTTGGTCCTATGGCTATATGGCAATGGCGTCAACAAGTTCA ATTCTTCTCCACTCACTTCAACGTCTATGTCCCCGACCTAATCTTCTTTG GCCAGTCCACAACAAAGTCTAGCGAGAGAAGCGAGAATTTTCAGGCACGG CTTTCACTATTTGAACATGAGTTACATTacccaccatttatttgtattac ttttgtttgagagtcagtaatgaatgatttgttgacagtataaaaacctC ATTACACTGTCGGTGTATATTGAACATTAGAATTTGACAACATTATTATA CATAATAGATGTGATCACATTTGTTGTCTAagaattattaatgttttttc aGGCAGTTTGTGTGGTGAAGCTTATGGAGAAGTTAGAAGTGAAAAAGTTT GACGTGGTGGGAACAAGCTATGGTGGGTTTGTAGCATATCATTTAGCTAC GATGTTGGGAGAAGAAAGGGTAGAGAAAGTGGTGATAGCAAGTTCAGGTG TTAACATGAGAAAGAGTGATAACGTGGCGTTGTTGGAAAGAGCTGAAATG GATAAGATTGAGGATCTCATGTTGCCTTCTACTCCTCAACATTTGCGCAA ATTGATGGCTTTGTCTGTCTCTTCCATGCGTTTCTATATCCCTGATTTTT TCTTGAAAGATTTCTTGAATGTAAGTTCAACTTTTTtttactctttcttt ttttatgctttagtTTATCTTCAATTTTTTGATTATGTGGAAAacaatat tattagtataattgACACATTAAGTCAGTCCAAGTAAACTCGATAAATAG ATAGATTTTGAGAACAAAAATTAAACTCCAATATACTCTAAATCATTTGG TTTGGCTTCATATAAGCTGAACCTAATAGTCCATTTGGGACACATAAGGG GGAACCCTTGAGCAGATTATTTTGGCAACTCACCACATATTAAAGAATCT ATTGTTCTAAACTATAATAGATTAATGatatagaaataaaaacaaaaaaa ttaataaatatttaattttttaattgatgttatttattatttatcatatt tttattggccTGTTAGGTCAAAGTCACATCTAACTCATAATACATGTTAC AAAATAGCTATTCTGTTACTATTAtgggtattataaatcaattattgtTT GAGATATGCAAAACTTGATTGGATATCTTTATACtttgaaaatgattact ttCTGTTTTCTGATCGGTAGTTGAGACACACTCTTGGTGCATATCAATAA ATAATAGTGCATGGGGCATACGGTATAGGCTTTCTGCACCATTTCCATGT TATTGAAATTAATAGTGAGATCTAGAGCAATAAAGTAAAGATTTTCGTCC CATCACTTATCTAATGAAACCAACCAGCATTGAAAATCCTACACGTTCCG TGTCACATGTCTAGTCGTTGGGAAAAAAGGaccacacacacatatataaa ttttcatatataatatctaTTTGAGTGACTATGCATTTgagaaacaaata aacaatttcCTCCACCTTGTTGCATACAATTGCATATACTTGCCAACACT AACCTTGAACTACTGCATACGTGGGATACAACAAGTCTAATTAGAGATGA CCATGAGTTTGAATGGTCCACGTAGTGCATTACCAAACCAtcttattgtt tcatttttaaacTAAGATCCACCCTAGATCAATGTTGGTATCAATGGGTA attataaattcaaaaatattaaaaataattatgaaaaatttatataattg tatgtttgtttctttaaatcttatatgttatttagataATTAACAAGAGA ACaaactattaaatataattaaaattttaaagagaatttaaattgactat taaacataacttattttatcaaaaacataaaaaaaaataaagtcactact taacattatatgtaaaattgatttagtaataaatgtttaattaatattat attatatatatgaattaataatataacatcacaTCACACTCGTTAACCAT AGAACATCAttatttaacaacataacagtcacatttatgaattaatatga tattataattatgaattaacaatataaaattacaattatgtTTAACaaga tattacaattatgttaatatatatatatatatttaggaagGGCGGGTCAG GGTACCAACATGTATGGATGCCTAATTACCTAGACCCATGCAATAGCGGA ACTCAAAAATCTCGAATCTCAGTTACTCATAAGTTCAAAACATGGACCCA TACCTGATTCTTACATGTATTATTTGTGGATACTTGCAGATATGCAACCG TAAGTCTAATTGAAAATTAAGAgagaatataataataagatgAGAAATCT AATACAAGTTAATTTTATGACCTTTATGCAGAAATTATACTCAGAAAACA GGAAGGAAAAGATGGAGCTTCTACATGGGTTATCCCTAGGAAGGGATGAC ACTTCAATCATTACACCTCTTCAACAAGTAGGCGAATAATTCATACTTAC ATGCATACCCCTACAATTATATACTgagtataaaattaaatattggatct cataagtattattatataatgattTATTCATAATCTTCTTATTCAGGAGG TTCTGATAATCTGGGGGGAGAATGACCAGATATTTCCTGTGCATAAGGCT CATGAACTGAAAGAGTATGTATCTAACTTCTTCAATATTAATAGGAGTGA TAAATCTATGCACTCACactataaagatatatatataatcagcatatttt tatcattcatttggattacttttttttgtaaagtTTGAGGATGATGCAGT AACattgtatacatctttttctcccTTATTAGAACACGTTCCACTAACAT GAATAAAGTAATTATTGCAGGGTAATCAGTAATAATAAGGTAAAATTGGA ATTGATAAAGAACGCATCGCATGTGCCTCAGATTGAAAAGCCAGCAGAAT TCAACAACATCATCCTAAATTTCTTACACAGGACTActtga back to topprotein sequence of rna-TanjilR_09862_La_Tanjil_v1.0 >rna-TanjilR_09862_La_Tanjil_v1.0 ID=rna-TanjilR_09862_La_Tanjil_v1.0; Name=rna-TanjilR_09862_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=274bp MFTSLYSGFLRRCFRAAGLSSQSIDLDDKTTLHYWGPTEISKTQKPSLVL IHGFGPMAIWQWRQQVQFFSTHFNAVCVVKLMEKLEVKKFDVVGTSYGGF VAYHLATMLGEERVEKVVIASSGVNMRKSDNVALLERAEMDKIEDLMLPS TPQHLRKLMALSVSSMRFYIPDFFLKDFLNKLYSENRKEKMELLHGLSLG RDDTSIITPLQQEVLIIWGENDQIFPVHKAHELKEVISNNKVKLELIKNA SHVPQIEKPAEFNNIILNFLHRTT back to topmRNA from alignment at Chr_LG15-CM007375.1:19814702..19817842+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_09862_La_Tanjil_v1.0 ID=rna-TanjilR_09862_La_Tanjil_v1.0; Name=rna-TanjilR_09862; organism=Lupinus angustifolius; type=mRNA; length=3141bp; location=Sequence derived from: Chr_LG15-CM007375.1:19814702..19817842+ (Lupinus angustifolius ATGTTCACCTCTCTTTACAGCGGCTTCCTCCGCCGTTGCTTCAGGGCGGC
CGGACTCTCCTCTCAATCCATTGACCTAGATGATAAAACCACCCTCCACT
ACTGGGGTCCCACAGAAAtatccaaaacccaaaaaccttcCCTAGTTCTT
ATCCATGGGTTTGGTCCTATGGCTATATGGCAATGGCGTCAACAAGTTCA
ATTCTTCTCCACTCACTTCAACGTCTATGTCCCCGACCTAATCTTCTTTG
GCCAGTCCACAACAAAGTCTAGCGAGAGAAGCGAGAATTTTCAGGCACGG
CTTTCACTATTTGAACATGAGTTACATTacccaccatttatttgtattac
ttttgtttgagagtcagtaatgaatgatttgttgacagtataaaaacctC
ATTACACTGTCGGTGTATATTGAACATTAGAATTTGACAACATTATTATA
CATAATAGATGTGATCACATTTGTTGTCTAagaattattaatgttttttc
aGGCAGTTTGTGTGGTGAAGCTTATGGAGAAGTTAGAAGTGAAAAAGTTT
GACGTGGTGGGAACAAGCTATGGTGGGTTTGTAGCATATCATTTAGCTAC
GATGTTGGGAGAAGAAAGGGTAGAGAAAGTGGTGATAGCAAGTTCAGGTG
TTAACATGAGAAAGAGTGATAACGTGGCGTTGTTGGAAAGAGCTGAAATG
GATAAGATTGAGGATCTCATGTTGCCTTCTACTCCTCAACATTTGCGCAA
ATTGATGGCTTTGTCTGTCTCTTCCATGCGTTTCTATATCCCTGATTTTT
TCTTGAAAGATTTCTTGAATGTAAGTTCAACTTTTTtttactctttcttt
ttttatgctttagtTTATCTTCAATTTTTTGATTATGTGGAAAacaatat
tattagtataattgACACATTAAGTCAGTCCAAGTAAACTCGATAAATAG
ATAGATTTTGAGAACAAAAATTAAACTCCAATATACTCTAAATCATTTGG
TTTGGCTTCATATAAGCTGAACCTAATAGTCCATTTGGGACACATAAGGG
GGAACCCTTGAGCAGATTATTTTGGCAACTCACCACATATTAAAGAATCT
ATTGTTCTAAACTATAATAGATTAATGatatagaaataaaaacaaaaaaa
ttaataaatatttaattttttaattgatgttatttattatttatcatatt
tttattggccTGTTAGGTCAAAGTCACATCTAACTCATAATACATGTTAC
AAAATAGCTATTCTGTTACTATTAtgggtattataaatcaattattgtTT
GAGATATGCAAAACTTGATTGGATATCTTTATACtttgaaaatgattact
ttCTGTTTTCTGATCGGTAGTTGAGACACACTCTTGGTGCATATCAATAA
ATAATAGTGCATGGGGCATACGGTATAGGCTTTCTGCACCATTTCCATGT
TATTGAAATTAATAGTGAGATCTAGAGCAATAAAGTAAAGATTTTCGTCC
CATCACTTATCTAATGAAACCAACCAGCATTGAAAATCCTACACGTTCCG
TGTCACATGTCTAGTCGTTGGGAAAAAAGGaccacacacacatatataaa
ttttcatatataatatctaTTTGAGTGACTATGCATTTgagaaacaaata
aacaatttcCTCCACCTTGTTGCATACAATTGCATATACTTGCCAACACT
AACCTTGAACTACTGCATACGTGGGATACAACAAGTCTAATTAGAGATGA
CCATGAGTTTGAATGGTCCACGTAGTGCATTACCAAACCAtcttattgtt
tcatttttaaacTAAGATCCACCCTAGATCAATGTTGGTATCAATGGGTA
attataaattcaaaaatattaaaaataattatgaaaaatttatataattg
tatgtttgtttctttaaatcttatatgttatttagataATTAACAAGAGA
ACaaactattaaatataattaaaattttaaagagaatttaaattgactat
taaacataacttattttatcaaaaacataaaaaaaaataaagtcactact
taacattatatgtaaaattgatttagtaataaatgtttaattaatattat
attatatatatgaattaataatataacatcacaTCACACTCGTTAACCAT
AGAACATCAttatttaacaacataacagtcacatttatgaattaatatga
tattataattatgaattaacaatataaaattacaattatgtTTAACaaga
tattacaattatgttaatatatatatatatatttaggaagGGCGGGTCAG
GGTACCAACATGTATGGATGCCTAATTACCTAGACCCATGCAATAGCGGA
ACTCAAAAATCTCGAATCTCAGTTACTCATAAGTTCAAAACATGGACCCA
TACCTGATTCTTACATGTATTATTTGTGGATACTTGCAGATATGCAACCG
TAAGTCTAATTGAAAATTAAGAgagaatataataataagatgAGAAATCT
AATACAAGTTAATTTTATGACCTTTATGCAGAAATTATACTCAGAAAACA
GGAAGGAAAAGATGGAGCTTCTACATGGGTTATCCCTAGGAAGGGATGAC
ACTTCAATCATTACACCTCTTCAACAAGTAGGCGAATAATTCATACTTAC
ATGCATACCCCTACAATTATATACTgagtataaaattaaatattggatct
cataagtattattatataatgattTATTCATAATCTTCTTATTCAGGAGG
TTCTGATAATCTGGGGGGAGAATGACCAGATATTTCCTGTGCATAAGGCT
CATGAACTGAAAGAGTATGTATCTAACTTCTTCAATATTAATAGGAGTGA
TAAATCTATGCACTCACactataaagatatatatataatcagcatatttt
tatcattcatttggattacttttttttgtaaagtTTGAGGATGATGCAGT
AACattgtatacatctttttctcccTTATTAGAACACGTTCCACTAACAT
GAATAAAGTAATTATTGCAGGGTAATCAGTAATAATAAGGTAAAATTGGA
ATTGATAAAGAACGCATCGCATGTGCCTCAGATTGAAAAGCCAGCAGAAT
TCAACAACATCATCCTAAATTTCTTACACAGGACTActtga back to topCoding sequence (CDS) from alignment at Chr_LG15-CM007375.1:19814702..19817842+ >rna-TanjilR_09862_La_Tanjil_v1.0 ID=rna-TanjilR_09862_La_Tanjil_v1.0; Name=rna-TanjilR_09862; organism=Lupinus angustifolius; type=CDS; length=825bp; location=Sequence derived from: Chr_LG15-CM007375.1:19814702..19817842+ (Lupinus angustifolius ATGTTCACCTCTCTTTACAGCGGCTTCCTCCGCCGTTGCTTCAGGGCGGC CGGACTCTCCTCTCAATCCATTGACCTAGATGATAAAACCACCCTCCACT ACTGGGGTCCCACAGAAAtatccaaaacccaaaaaccttcCCTAGTTCTT ATCCATGGGTTTGGTCCTATGGCTATATGGCAATGGCGTCAACAAGTTCA ATTCTTCTCCACTCACTTCAACGCAGTTTGTGTGGTGAAGCTTATGGAGA AGTTAGAAGTGAAAAAGTTTGACGTGGTGGGAACAAGCTATGGTGGGTTT GTAGCATATCATTTAGCTACGATGTTGGGAGAAGAAAGGGTAGAGAAAGT GGTGATAGCAAGTTCAGGTGTTAACATGAGAAAGAGTGATAACGTGGCGT TGTTGGAAAGAGCTGAAATGGATAAGATTGAGGATCTCATGTTGCCTTCT ACTCCTCAACATTTGCGCAAATTGATGGCTTTGTCTGTCTCTTCCATGCG TTTCTATATCCCTGATTTTTTCTTGAAAGATTTCTTGAATAAATTATACT CAGAAAACAGGAAGGAAAAGATGGAGCTTCTACATGGGTTATCCCTAGGA AGGGATGACACTTCAATCATTACACCTCTTCAACAAGAGGTTCTGATAAT CTGGGGGGAGAATGACCAGATATTTCCTGTGCATAAGGCTCATGAACTGA AAGAGGTAATCAGTAATAATAAGGTAAAATTGGAATTGATAAAGAACGCA TCGCATGTGCCTCAGATTGAAAAGCCAGCAGAATTCAACAACATCATCCT AAATTTCTTACACAGGACTActtga back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
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