rna-TanjilR_01592
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_DANRE (Alpha/beta hydrolase domain-containing protein 17C OS=Danio rerio OX=7955 GN=abhd17c PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.752e-15 Identity = 54/127 (42.52%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG STGK PSE N YADIEAA++ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 131 YDYSGYGVSTGK------------------------------------PSEKNLYADIEAAWQVLRNKYGVTPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 220 HSP 2 Score: 25.0238 bits (53), Expect = 1.752e-15 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDK+ +V+ PVL+IH Sbjct: 222 SIDKVSKVASPVLVIH 237 HSP 3 Score: 64.6994 bits (156), Expect = 9.170e-10 Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +++ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FI+ Sbjct: 234 LVIHGTEDEVIDFSHGLAIYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIT 288
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AHO3_CAEEL (Alpha/beta hydrolase domain-containing protein aho-3 OS=Caenorhabditis elegans OX=6239 GN=aho-3 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.803e-15 Identity = 52/135 (38.52%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 1222 LHFHSQLSIFWCRYDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYPVRRSYW 1626 L FH ++F YDYSGYG STGK PSE N YADI AA++ L+ +G +E IILYGQS+G+ P++D A L A+VLHSP++SG+RV +P + W Sbjct: 135 LGFHLNCNVF--SYDYSGYGCSTGK------------------------------------PSEKNLYADITAAFELLKSEFGVPKEKIILYGQSIGTVPSVD-LASREDLAALVLHSPLMSGMRVAFPGTTTTW 230 HSP 2 Score: 28.4906 bits (62), Expect = 1.803e-15 Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 3 Query: 1740 CVYMQNIDKIPQVSCPVLIIH 1802 C +I+K+P+V CP L+IH Sbjct: 232 CDAFPSIEKVPRVKCPTLVIH 252 HSP 3 Score: 60.077 bits (144), Expect = 4.537e-8 Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFI 2894 +++ GT DEV+D SHG ++E C EPLW+ G H D+EL Y+ L+ FI Sbjct: 249 LVIHGTDDEVIDFSHGVSIYERCPTSVEPLWVPGAGHNDVELHAAYLERLRSFI 302
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_CHICK (Alpha/beta hydrolase domain-containing protein 17C OS=Gallus gallus OX=9031 GN=ABHD17C PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.068e-15 Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG STGK PSE N YADI+AA++ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 147 YDYSGYGVSTGK------------------------------------PSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 236 HSP 2 Score: 25.7942 bits (55), Expect = 5.068e-15 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDKI +V+ PVL+IH Sbjct: 238 SIDKISKVTSPVLVIH 253 HSP 3 Score: 65.855 bits (159), Expect = 5.274e-10 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +++ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FIS Sbjct: 250 LVIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS 304
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_XENLA (Alpha/beta hydrolase domain-containing protein 17C OS=Xenopus laevis OX=8355 GN=abhd17c PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.693e-15 Identity = 53/127 (41.73%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG S+GK PSE N YADIEAA+ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 148 YDYSGYGVSSGK------------------------------------PSEKNLYADIEAAWHALRTRYGVTPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 237 HSP 2 Score: 26.5646 bits (57), Expect = 6.693e-15 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDKI +V+ PVLIIH Sbjct: 239 SIDKISKVTSPVLIIH 254 HSP 3 Score: 66.2402 bits (160), Expect = 4.166e-10 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +I+ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FIS Sbjct: 251 LIIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS 305
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_XENTR (Alpha/beta hydrolase domain-containing protein 17C OS=Xenopus tropicalis OX=8364 GN=abhd17c PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.883e-15 Identity = 53/127 (41.73%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG S+GK PSE N YADIEAA+ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 147 YDYSGYGVSSGK------------------------------------PSEKNLYADIEAAWHALRTRYGVTPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 236 HSP 2 Score: 26.1794 bits (56), Expect = 7.883e-15 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDKI +V+ PVLIIH Sbjct: 238 SIDKISKVTSPVLIIH 253 HSP 3 Score: 65.855 bits (159), Expect = 5.086e-10 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +I+ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FIS Sbjct: 250 LIIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS 304
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_RAT (Alpha/beta hydrolase domain-containing protein 17C OS=Rattus norvegicus OX=10116 GN=Abhd17c PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.553e-14 Identity = 52/127 (40.94%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG S+GK PSE N YADI+AA++ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 157 YDYSGYGVSSGK------------------------------------PSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 246 HSP 2 Score: 25.7942 bits (55), Expect = 1.553e-14 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDKI +V+ PVL+IH Sbjct: 248 SIDKISKVTSPVLVIH 263 HSP 3 Score: 65.4698 bits (158), Expect = 7.048e-10 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +++ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FIS Sbjct: 260 LVIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS 314
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_MOUSE (Alpha/beta hydrolase domain-containing protein 17C OS=Mus musculus OX=10090 GN=Abhd17c PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.553e-14 Identity = 52/127 (40.94%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG S+GK PSE N YADI+AA++ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 157 YDYSGYGVSSGK------------------------------------PSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 246 HSP 2 Score: 25.7942 bits (55), Expect = 1.553e-14 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDKI +V+ PVL+IH Sbjct: 248 SIDKISKVTSPVLVIH 263 HSP 3 Score: 65.4698 bits (158), Expect = 7.048e-10 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +++ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FIS Sbjct: 260 LVIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS 314
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_HUMAN (Alpha/beta hydrolase domain-containing protein 17C OS=Homo sapiens OX=9606 GN=ABHD17C PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.616e-14 Identity = 52/127 (40.94%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG S+GK PSE N YADI+AA++ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 166 YDYSGYGVSSGK------------------------------------PSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 255 HSP 2 Score: 25.7942 bits (55), Expect = 1.616e-14 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDKI +V+ PVL+IH Sbjct: 257 SIDKISKVTSPVLVIH 272 HSP 3 Score: 65.4698 bits (158), Expect = 7.808e-10 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +++ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FIS Sbjct: 269 LVIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS 323
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17C_BOVIN (Alpha/beta hydrolase domain-containing protein 17C OS=Bos taurus OX=9913 GN=ABHD17C PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.873e-14 Identity = 52/127 (40.94%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG S+GK PSE N YADI+AA++ L YG E+IILYGQS+G+ PT+D A + AV+LHSP++SGLRV +P R++Y FD + Sbjct: 166 YDYSGYGVSSGK------------------------------------PSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVD-LASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAF 255 HSP 2 Score: 25.7942 bits (55), Expect = 1.873e-14 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 +IDKI +V+ PVL+IH Sbjct: 257 SIDKISKVTSPVLVIH 272 HSP 3 Score: 65.4698 bits (158), Expect = 8.022e-10 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +++ GT DEV+D SHG ++E C EPLW++G H D+EL+ +Y+ LK+FIS Sbjct: 269 LVIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS 323
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Match: AB17B_HUMAN (Alpha/beta hydrolase domain-containing protein 17B OS=Homo sapiens OX=9606 GN=ABHD17B PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 7.075e-14 Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 1261 YDYSGYGQSTGKVCKNIRNAXXXXXXXXXXXXSR*KHVLMNIILPELQPSEHNTYADIEAAYKCLEESYGAKQEDIILYGQSVGSGPTLDXXXXXXXXXXXXXHSPILSGLRVMYP-VRRSYWFDIY 1638 YDYSGYG S+GK P+E N YADIEAA+ L YG + E++I+YGQS+G+ P++D A + AV+LHSP+ SG+RV +P +++Y FD + Sbjct: 125 YDYSGYGASSGK------------------------------------PTEKNLYADIEAAWLALRTRYGIRPENVIIYGQSIGTVPSVD-LAARYESAAVILHSPLTSGMRVAFPDTKKTYCFDAF 214 HSP 2 Score: 28.8758 bits (63), Expect = 7.075e-14 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 1755 NIDKIPQVSCPVLIIH 1802 NIDKI +++ PVLIIH Sbjct: 216 NIDKISKITSPVLIIH 231 HSP 3 Score: 66.6254 bits (161), Expect = 2.475e-10 Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 2733 VIV*GTSDEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELFPEYMRHLKKFIS 2897 +I+ GT DEV+D SHG L+E C+ EPLW++G H D+EL+ +Y+ LK+F+S Sbjct: 228 LIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVELYGQYLERLKQFVS 282 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01592 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01592_La_Tanjil_v1.0 ID=rna-TanjilR_01592_La_Tanjil_v1.0; Name=rna-TanjilR_01592; organism=Lupinus angustifolius; type=mRNA; length=3224bpback to top protein sequence of rna-TanjilR_01592_La_Tanjil_v1.0 >rna-TanjilR_01592_La_Tanjil_v1.0 ID=rna-TanjilR_01592_La_Tanjil_v1.0; Name=rna-TanjilR_01592_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=360bpback to top mRNA from alignment at Chr_LG20-CM007380.1:20617608..20620831+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01592_La_Tanjil_v1.0 ID=rna-TanjilR_01592_La_Tanjil_v1.0; Name=rna-TanjilR_01592; organism=Lupinus angustifolius; type=mRNA; length=3224bp; location=Sequence derived from: Chr_LG20-CM007380.1:20617608..20620831+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20617608..20620831+ >rna-TanjilR_01592_La_Tanjil_v1.0 ID=rna-TanjilR_01592_La_Tanjil_v1.0; Name=rna-TanjilR_01592; organism=Lupinus angustifolius; type=CDS; length=1083bp; location=Sequence derived from: Chr_LG20-CM007380.1:20617608..20620831+ (Lupinus angustifoliusback to top |