rna-TanjilR_01590
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2) HSP 1 Score: 422.165 bits (1084), Expect = 3.086e-140 Identity = 199/248 (80.24%), Postives = 218/248 (87.90%), Query Frame = 1 Query: 454 RSINASRRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 INASRRNLG LSCGTGNPIDDCWRC P WE NRQRLADCAIGFGK AIGGR+GKIYVVTDS D D VNP+PGTLRHA IQDEPLWIIF RDMVI LKEEL++NSFKTIDGRGASVHIA G CIT+ YV+NIIIHG++IHDCK +GN +R+SP H G+ T SDGD +SIF H+WVDHCSLSNC DGLIDAIHGSTAITISNNY +HH+KVMLLGH+D YT+DK+MQVTIAFNHFGEGLVQRMPR Sbjct: 42 EKINASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPR 289 HSP 2 Score: 155.992 bits (393), Expect = 5.654e-40 Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHW+MYAIGGSA PTINSQGNRFLAPN KEVTK+EDA +WK WNWRSEGDLFLNGAFF SGGGA +SYA+ASSLSARPSSLV S+T +GAL CRKG+ C Sbjct: 289 RCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1) HSP 1 Score: 418.698 bits (1075), Expect = 6.442e-139 Identity = 210/248 (84.68%), Postives = 227/248 (91.53%), Query Frame = 1 Query: 454 RSINASRRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 +SINASRRNLGYLSCGTGNPIDDCWRC PNW NNRQRLADCAIGFGK+A+GGRNG+IYVVTD G+DDPVNP PGTLR+A IQDEPLWIIF+RDMVI L++EL++NS KTIDGRG +VHI +G CITIHY SNIIIHGIHIHDCK GN NIRNSP HSG+WT SDGDGISIF SK IW+DH SLSNCHDGLIDAIHGSTAITISNNY THHDKVMLLGH+D YTQDK+MQVTIAFNHFGEGLVQRMPR Sbjct: 35 KSINASRRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPR 282 HSP 2 Score: 168.318 bits (425), Expect = 1.924e-44 Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSA+PTI SQGNRFLAPN RF KEVTKHE+A E EWKNWNWRSEGDL LNGA+FR+SGG A +S+ARASSLS RPS+LV SMT ++GAL+CRKG+ C Sbjct: 282 RCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1) HSP 1 Score: 414.461 bits (1064), Expect = 6.708e-137 Identity = 194/250 (77.60%), Postives = 221/250 (88.40%), Query Frame = 1 Query: 454 RSINAS--RRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 R IN S RR LG+ SCG+GNPIDDCWRC +WE NR+RLADC IGFGK+AIGGR+G+IYVVTD G+DDPVNPRPGTLR+A IQDEPLWIIF+RDM I LKEEL++NSFKT+DGRGASVHI+ G CITI YV+NIIIHG+HIHDCK GNT +R+SP+H G+ T+SDGDG+SIF H+WVDHCSLSNC+DGLIDAI GSTAITISNNY THH+KVMLLGH+D Y QDK+MQVTIAFNHFGEGLVQRMPR Sbjct: 62 RKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPR 311 HSP 2 Score: 163.31 bits (412), Expect = 2.199e-42 Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXX--XXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAP+ SKEVTKHEDA EDEW+NWNWRSEGDL LNGAFF SG +SY++ASSL+ARPSS VG +T+ SGAL C++G+HC Sbjct: 311 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana OX=3702 GN=At3g07010 PE=2 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 1.254e-130 Identity = 179/245 (73.06%), Postives = 213/245 (86.94%), Query Frame = 1 Query: 463 NASRRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 + RR LGY SC TGNPIDDCWRC W+ R+RLADC+IGFG++AIGGR+G+ YVVTD GDDDPVNP PGTLRHA IQDEPLWIIF+RDMVITLK+EL++NSFKTIDGRG +VHIA+G C+TI YV+NII+HGIH+HDCKP GN +R+SP H GF +++DGD ISIF S HIW+DH SLSNC DGL+DA+ STAIT+SNN+FTHH++VMLLGH+D YT+DK MQVTIA+NHFGEGL+QRMPR Sbjct: 53 STERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPR 297 HSP 2 Score: 153.68 bits (387), Expect = 4.639e-39 Identity = 95/120 (79.17%), Postives = 102/120 (85.00%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRFLAP F+KEVTK E E +WK+WNWRSEGDLFLNGAFF +SG GAGA+YARASSLSA+ SSLVG+MT SGAL CR G C Sbjct: 297 RCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2) HSP 1 Score: 396.356 bits (1017), Expect = 3.679e-130 Identity = 197/251 (78.49%), Postives = 224/251 (89.24%), Query Frame = 1 Query: 454 RSINAS---RRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 +SINAS RR LGYLSC TGNPIDDCWRC P+WE +RQRLADCAIGFGK+AIGGR+G+IYVVTDSG+D+PV+P+PGTLRHA +QDEPLWIIFQRDM I LKEEL++NSFKTIDGRGASVHI+ G CITI YV+NIIIHGIHIHDCK GN +R+SP+H G+ TISDGDG+SIF H+WVDHCS SNC DGLIDAI GSTAIT+SNN+ THHDKVMLLGH+D Y++DK+MQVTIAFNHFGEGLVQRMPR Sbjct: 39 KSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPR 289 HSP 2 Score: 173.711 bits (439), Expect = 3.644e-46 Identity = 101/120 (84.17%), Postives = 106/120 (88.33%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDA E EWK WNWRS GDL LNGAFF SGG A +SYA+ASSL A+PSSLVG +T TSGAL CRKG+ C Sbjct: 289 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2) HSP 1 Score: 390.193 bits (1001), Expect = 8.412e-128 Identity = 189/246 (76.83%), Postives = 214/246 (86.99%), Query Frame = 1 Query: 460 INASRRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 NASRR+L YLSC TGNPIDDCWRC PNWE NRQRLADCAIGFGK+AIGGR G+IYVVTD +DDPVNPRPGTLR+A Q+EPLWIIF+RDMVI LK+EL++ SFKTIDGRG+SVHI G C+ IHY +NIIIHGI+IHDCKP I++ P H+G+W SDGD ++IF KH+W+DHCSLSNC DGLIDAIHGSTAITISNN+ THHDKVMLLGH+D YTQDK+MQVTIAFNHFGEGLVQRMPR Sbjct: 48 FNASRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPR 293 HSP 2 Score: 166.007 bits (419), Expect = 1.743e-43 Identity = 94/120 (78.33%), Postives = 107/120 (89.17%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSA+PTI SQGNRFLAPN RF+KEVTKHEDA E +W++WNWRSEGD+ LNGA+FR+SG A ++YARASSLSARPSSLVGS+T T+G L CR+G C Sbjct: 293 RCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 9.906e-128 Identity = 172/243 (70.78%), Postives = 213/243 (87.65%), Query Frame = 1 Query: 469 SRRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 +RR LG+ SCGTGNPIDDCWRC NW NR+RLADC IGFG++AIGGR+G+ Y+VTD D+D VNP+PGTLRHA IQ+EPLWI+F+RDMVI LK+EL++NSFKTID RG++VHIA+G CITI +++N+IIHG+HIHDCKP GN +R+SP H G+ T++DGD +SIF S HIW+DH SLS+C DGL+DA+ GSTAIT+SNN+FTHH++VMLLGH+D YT+DK MQVTIA+NHFGEGLVQRMPR Sbjct: 109 ARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPR 351 HSP 2 Score: 156.377 bits (394), Expect = 1.214e-39 Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNR+ AP RF+KEVTK + EWK WNWRSEGDL LNGAFFR SG GA ASY RASSL+A+PSS+V ++T T+GAL CRKG C Sbjct: 351 RCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC 470
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g04680 PE=2 SV=2) HSP 1 Score: 390.578 bits (1002), Expect = 1.496e-127 Identity = 176/243 (72.43%), Postives = 211/243 (86.83%), Query Frame = 1 Query: 469 SRRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 RR LGY +CGTGNPIDDCWRC PNW NR+RLADC IGFG++AIGGR+G+ YVVTD DD+PVNPRPGTLRHA IQD PLWI+F+RDMVI LK+EL+VNSFKTIDGRGA+VHIA+GGCITI +V+N+I+HG+HIHDCKP GN +R+S H G+ T++DGD ISIF S H+W+DH SLS+C DGL+DA+ GSTAITISNN+ THH++VMLLGH+D Y +DK MQVTIA+NHFG GL+QRMPR Sbjct: 68 ERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPR 310 HSP 2 Score: 143.665 bits (361), Expect = 1.608e-35 Identity = 86/120 (71.67%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR+ AP F+KEVTK D WK WNWRSEGDL NGA+F SG A SYARASSLSA+ SSLVG +T +GAL CR+G C Sbjct: 310 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAGALPCRRGRQC 429
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum OX=4081 GN=9612 PE=2 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 1.082e-125 Identity = 196/250 (78.40%), Postives = 218/250 (87.20%), Query Frame = 1 Query: 454 RSINAS--RRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 RSINAS RRNLGYLSCG+GNPID P + CAIGFGK+AIGG+NG+IYVVTDSG+DDPVNP+PGTLRHA IQDEPLWIIF+RDMVI LK+EL++NS+KTIDGRGASVHI+ G CITIH+ SNIIIHGI+IHDCK GN NIR+SP HSG+W +SDGDGISIF K+IWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGH+D +TQDK MQVT+AFNHFGEGLVQRMPR Sbjct: 34 RSINASLTRRNLGYLSCGSGNPIDRLLAMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEPLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQSGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPR 283 HSP 2 Score: 159.844 bits (403), Expect = 2.057e-41 Identity = 80/122 (65.57%), Postives = 94/122 (77.05%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXX--XMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRFLAPN ++ KEVTKHEDA E +W++WNWRSEGDL LNGA+FRQ+G GA +S A + S S+T +G + C+KG+ C Sbjct: 283 RCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Match: PLY10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana OX=3702 GN=At3g24670 PE=2 SV=2) HSP 1 Score: 378.637 bits (971), Expect = 7.318e-123 Identity = 175/245 (71.43%), Postives = 206/245 (84.08%), Query Frame = 1 Query: 463 NASRRNLGYLSCGTGNPIDDCWRCYPNWENNRQRLADCAIGFGKDAIGGRNGKIYVVTDSGDDDPVNPRPGTLRHAAIQDEPLWIIFQRDMVITLKEELLVNSFKTIDGRGASVHIASGGCITIHYVSNIIIHGIHIHDCKPRGNTNIRNSPQHSGFWTISDGDGISIFNSKHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHNDYYTQDKDMQVTIAFNHFGEGLVQRMPR 1197 + RR LG+ SC TGNPIDDCWRC NW R+RLA+CAIGFG++AIGGR+G+ YVVTD D D VNPRPGTLRHA IQD PLWI+F+RDMVITL +EL++NSFKTIDGRG +V IA G CITI YV+NIIIHGI++HDC+ GN +R+SP H G+ T++DGD ISIF S HIW+DH SLSNC DGLIDAI GSTAITISNNY THH++VML+GH+D YT+DK MQVTIA+NHFGEGL+QRMPR Sbjct: 77 STERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPR 321 HSP 2 Score: 146.747 bits (369), Expect = 1.583e-36 Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 1 Query: 1939 RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDASEDEWKNWNWRSEGDLFLNGAFFRQXXXXXXXXXXXXXXXXXXXXXXXXXMTVTSGALICRKGAHC 2298 RCRHGYFHVVNNDYTHW MYAIGGSANPTINSQGNRFLAP F+KEVTK + + EWK WNWRS+GDL LNGA+F +SG A ASYARASSL A+P+S+V +T +SGAL CR G C Sbjct: 321 RCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPASVVSMLTYSSGALKCRIGMRC 440 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01590 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01590_La_Tanjil_v1.0 ID=rna-TanjilR_01590_La_Tanjil_v1.0; Name=rna-TanjilR_01590; organism=Lupinus angustifolius; type=mRNA; length=2301bpback to top protein sequence of rna-TanjilR_01590_La_Tanjil_v1.0 >rna-TanjilR_01590_La_Tanjil_v1.0 ID=rna-TanjilR_01590_La_Tanjil_v1.0; Name=rna-TanjilR_01590_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=404bpback to top mRNA from alignment at Chr_LG20-CM007380.1:20636771..20639071- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01590_La_Tanjil_v1.0 ID=rna-TanjilR_01590_La_Tanjil_v1.0; Name=rna-TanjilR_01590; organism=Lupinus angustifolius; type=mRNA; length=2301bp; location=Sequence derived from: Chr_LG20-CM007380.1:20636771..20639071- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20636771..20639071- >rna-TanjilR_01590_La_Tanjil_v1.0 ID=rna-TanjilR_01590_La_Tanjil_v1.0; Name=rna-TanjilR_01590; organism=Lupinus angustifolius; type=CDS; length=1215bp; location=Sequence derived from: Chr_LG20-CM007380.1:20636771..20639071- (Lupinus angustifoliusback to top |