rna-TanjilR_01562
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: FBK70_ARATH (F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana OX=3702 GN=At3g27150 PE=2 SV=1) HSP 1 Score: 394.815 bits (1013), Expect = 6.580e-135 Identity = 200/369 (54.20%), Postives = 263/369 (71.27%), Query Frame = 1 Query: 40 SSSGQEPQDADY---DVPCLSDELETMILARFPISEHWKLCVLNKQFLAALKKGEVYKIRREIGFKEPSVFMLASGESNWCAFDENFKCCKKLPIIPSDYSFEYGDKESFSAGTNLFVSGKEIDGAVIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGL--ETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTLDASSNEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGATSLSYSERALTIYTCFP--DPAFEKLPWKQI-VCSSTKLNPFIHNCAVMLA 1122 SS+ +P+DADY +VP L ELE ILAR P E+WKL +LNK F LK E++K+RRE G EPSVFML+SG++ W FD+ F C+KLP +PSD F +GDKES AGT+L V+GKE +WRYEL T++WFKGP+M T R LFASA+CG FVAGGL E EV+ S E+Y+S++ +W L M ++RKFCSGCY+ KFYV+GG+DE +LTCGE +D+KTN+W LIP++LKD+ SS +SPPL+AV ++LY+L+ S+NE++VY +NSWKKLG VPVRA + GGWGVAFKSLG+KLLVIGA++ +++YT P +PA KL W++ C + N FI NC VM+A Sbjct: 55 SSTCLKPKDADYCLLNVPQLVYELEVEILARVPRFEYWKLKLLNKGFSRLLKSDEIFKVRRERGVVEPSVFMLSSGDTCWTMFDKGFGNCQKLPELPSDICFLHGDKESLCAGTHLIVTGKEEKSIALWRYELETSKWFKGPAMITPRILFASATCGTVVFVAGGLKIEGNGTMEVVDSVEKYDSKTKTWTLLRGMHKRRKFCSGCYLRGKFYVLGGRDENGQNLTCGESYDEKTNTWELIPDILKDMSFSSVQSPPLIAVVGDDLYSLETSANELRVYDANANSWKKLGDVPVRAKSNGGWGVAFKSLGDKLLVIGASAGPSRAETMSVYTSRPSANPA-NKLYWEESKRCCGVRFNHFILNCCVMIA 422
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: FBK15_ARATH (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana OX=3702 GN=At1g26930 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.526e-71 Identity = 138/384 (35.94%), Postives = 209/384 (54.43%), Query Frame = 1 Query: 4 RILELLTSKATGSSSGQEPQDADYDVPCLSDELETMILARFPISEHWKLCVLNKQFLAALKKGEVYKIRREIGFKEPSVFMLASGESNWCAFDENFKCCKKLPIIPSDYSFEYGDKESFSAGTNLFVSGKEIDGAVIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIG----GQDEQHNDLTCGEFFDQKTNSWNLIPNM------LKDILLSSSRSPPLVAVANNELYTLDASSNEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGATSLSYSERALTIYTCFPD---PAFEKLPWKQIVCSSTKLNPFIHNCAVM 1116 ++ +L T + G +G D+ +P ++ + L R +++ + +N+ + ++ GE+Y++RR G E V+ + + W AFD K LP +P + F Y DKES + GT+L V G E+ VI+RY L TN W SMN RCLF SAS G A +AGG ++ +L +AE YN E +W LP M ++RK CSG +MD KFYVIG G++ + LTCGE FD KT W IP M + + +++ +PPLVAV N++LY D + V+ Y KE W K+G +P +A + GWG+AF++ G++++VIG + E + + + P P + L KQ V F++NCAVM Sbjct: 48 KMYKLTTDSSEGEDNGSS-SDSGTLIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQGTLEHWVY-FSCHLNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFGWEVSSYVIYRYSLLTNSWSTAKSMNMPRCLFGSASYGEIAVLAGGCDSSG--RILDTAELYNYEDQTWLVLPGMNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEIPEMSPPRSNQGNGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQAGSMNGWGLAFRACGDRIIVIGGPK-APGEGFIELNSWVPSVTTPEWHLLGKKQSV-------NFVYNCAVM 419
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: SKI11_ARATH (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana OX=3702 GN=SKIP11 PE=1 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 6.224e-70 Identity = 134/343 (39.07%), Postives = 193/343 (56.27%), Query Frame = 1 Query: 115 LARFPISEHWKLCVLNKQFLAALKKGEVYKIRREIGFKEPSVFMLASGESNWCAFDENFKCCKKLPIIPSDYSFEYGDKESFSAGTNLFVSGKE-IDGAVIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGG-QDEQHNDLTCGEFFDQKTNSWNLIPNML-------KDILLSSSRSPPLVAVANNELYTLDASSNEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGATSLSYSERALTIYTCFPDPAFEKLPWKQIVCSSTKLNPFIHNCAVM 1116 L R S++ + LN+ F + +K GE+Y++RR+ GF E V+ + W AFD + +LP +PS +F DKES + GT+L V GK+ VI+RY L TN W G MN+ RCLF SAS G A AGG +++ ++L AE YNSE +W TLP+M + RK CSG +MD KFYVIGG LTCGE +D +T W IP++ + + ++ +PPLVAV NN+LY D + EV+ Y KE+ W +G +P RA + GWG+AF++ G +L+VIG S + + + P + P + + F++NCAVM Sbjct: 130 LIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVY-FSCQLLEWVAFDPVERRWMQLPTMPSSVTFMCADKESLAVGTDLLVLGKDDFSSHVIYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDSQG--KILDFAEMYNSELQTWITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTCGEEYDLETKKWTQIPDLSPPRSRADQADMSPAAEAPPLVAVVNNQLYAADHADMEVRKYDKENKKWLTVGRLPERAGSVNGWGLAFRACGERLIVIGGPKCS-GGGFIELNSWIPS---DGGPPQWTLLDRKHSPTFVYNCAVM 465
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: FK132_ARATH (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.160e-69 Identity = 133/351 (37.89%), Postives = 190/351 (54.13%), Query Frame = 1 Query: 67 ADYDVPCLSDELETMILARFPISEHWKLCVLNKQFLAALKKGEVYKIRREIGFKEPSVFMLASGESNWCAFDENFKCCKKLPIIPSDYSFEYGDKESFSAGTNLFVSGKEIDGAVIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTLDASSNEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGATSLSYSERALTIYTCFPDPAFE-KLPWKQIVCSSTKLNPFIHNCAVM 1116 +D +P L D++ LA P S++ L +NK++ + G ++ +R+E+G E VFM+ W F K LP +P D F + DKES + L V G+E+ IW+Y L + W K M+ RCLFAS S G A VAGG + +L+SAE Y+S S WE LP M R+ CSG +MD KFYVIGG + +T GE FD +T W I M ++ ++++PPLV V NNEL+TL+ S+N VK Y K N W+ +G +P D+ GWG+AFK G++LLV + E + C A + L WK ++ + F++NCAVM Sbjct: 46 SDSVLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMVCD-PRGWLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNG--NILASAELYDSSSGRWEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPNVSVTFGEEFDLETRKWRKIEGMYPNV-NRAAQAPPLVVVVNNELFTLEYSTNMVKKYDKVKNKWEVMGRLPPMVDSSNGWGLAFKPCGDQLLVFCGQRGPHGEGIVVNSWCPKSGAKDGNLDWK-VLGVKENVGVFVYNCAVM 391
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: FBK29_ARATH (F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana OX=3702 GN=At1g74510 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.965e-68 Identity = 135/349 (38.68%), Postives = 191/349 (54.73%), Query Frame = 1 Query: 115 LARFPISEHWKLCVLNKQFLAALKKGEVYKIRREIGFKEPSVFMLASGESNWCAFDENFKCCKKLPIIPSDYSFEYGDKESFSAGTNLFVSGKEIDGAVIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHND-LTCGEFFDQKTNSWNLIPNML------------KDI--LLSSSRSPPLVAVANNELYTLDASSNEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGATSLSYSERALTIYTCFPDPAFEKLPWKQIVCSSTKLNPFIHNCAVM 1116 LA +S+ + N+ F + +K E+Y++RR G E ++ + W A+D N ++P + + F DKES + GT L V GKEI VI+RY + TN W G MN RCLF SAS G A +AGG + + +LSSAE YNSE+ W +P M + RK CS +MD FY IGG E ++ L CGE +D K +W LIPNML K+I ++S +PPLVAV +ELY + + EVK Y K N W K+G +P RA + GWG+AF++ G++L+V+G + + I C P +L W+ V +S F++NCAVM Sbjct: 108 LAHCSLSDFGSIASTNRTFRSLIKDSELYRLRRAKGIVEHWIY-FSCRLLEWEAYDPNGDRWLRVPKMTFNECFMCSDKESLAVGTELLVFGKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLGEIAVIAGGCDPRG--RILSSAELYNSETGEWTVIPSMNKARKMCSSVFMDGNFYCIGGIGEGNSKMLLCGEVYDLKKKTWTLIPNMLPERSSGGGGDQAKEIAAATAASEAPPLVAVVKDELYAANYAQQEVKKYDKRLNVWNKVGNLPERASSMNGWGMAFRACGDQLVVVGGPR-AIGGGFIEINACVPSEG-TQLHWR--VLASKPSGNFVYNCAVM 449
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.205e-19 Identity = 80/307 (26.06%), Postives = 139/307 (45.28%), Query Frame = 1 Query: 79 VPCLSDELETMILARFPISEHWKLCVLNKQFLAALKKGEVYKIRREIGFKEPSVFMLA---SGESNWCAFDENFKCCKKLPIIPSDYSFEYGDKESFSAGTNLFVSGKE--IDGAV--IWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTLDASSN-EVKVYLKESNSWKK-LGTVPVRADAQGGWGVAFKSLGNKLLVI 972 +P L D+L L R P +EH KL ++ K++ Y R+ +G E V++ G+ +W FD + + LP +P +YS G + +G +L++ G + + G++ + Y TN+W + P M R F +VAGG E + + L SAE Y+ + W + M G D K+++ G Q L E +D + NSW+ + D +++ R+P N LY LD +++V+ + ++SW K + + +++ A L NKL +I Sbjct: 79 LPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGG-ECEGIQRTLRSAEVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQ---LVMSEAYDPEVNSWSPV----SDGMVAGWRNP--CTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSKSLEAAALVPLHNKLCII 375
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: SKI30_ARATH (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 3.135e-15 Identity = 73/305 (23.93%), Postives = 132/305 (43.28%), Query Frame = 1 Query: 115 LARFPISEHWKLCVLNKQFLAALKKGEVYKIRREIGFKEPSVFMLASGESN-WCAFDENFKCCKKLPIIPSDYSFEYGDKESFSAGTNLFVSGKEIDGAV--------------IWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRK-FCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTLDASSNEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGAT 981 LA P+ H L ++++ + AA++ E++++R+E+ E + + A N W + N LP++PS +AG LFV G D +W Y+ +W SM R +FA VAGG TCR+ +S AE Y+ E+ W ++P + + CSG ++ K +V+ H L+ + + W+ +KD P+V V + LY + V+ +E ++WK + + ++ + G+A SL +++L++G Sbjct: 24 LAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCVCAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGM-LFVLGGGSDAVSPVTGDHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGF--TTCRKSISGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVL------HKGLSTVQVLESVKLGWD-----VKDYGWPQG---PMV-VVEDVLYVMSHG----LVFKQEGDTWKMVASA---SEFKRRIGMAMTSLSDEVLIVGGV 303
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: KLH20_CHICK (Kelch-like protein 20 OS=Gallus gallus OX=9031 GN=KLHL20 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.774e-14 Identity = 55/214 (25.70%), Postives = 103/214 (48.13%), Query Frame = 1 Query: 367 GTNLFVSGKEIDGA----VIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTL---DASS--NEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGAT 981 G L+ G + DG ++ RY+ N+W + SM+T R A A G + + GG + + L++ ERYN + + W T+ M +RK + Y +GG+D+ +L+ E ++ +TN W+ + + ++S RS +AV N +L + D ++ ++V+ ++N+W+ G G+ ++ LG + VI T Sbjct: 413 GGYLYAVGGQ-DGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTS---PLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDT-TELSSAERYNPRTNQWSPV------VAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYG------------GMNYRRLGGGVGVIKMT 603 HSP 2 Score: 58.151 bits (139), Expect = 5.652e-8 Identity = 46/168 (27.38%), Postives = 75/168 (44.64%), Query Frame = 1 Query: 496 CGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSS-RSPPLVAVANNELYTLDASS-----NEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGAT 981 CG F GG + + +SS ERY+ +++ W + M ++R +D+ Y +GG D + L E +D KTN W+ D+ +S+ R+ VAV LY + N V+ Y + N W ++ ++ R GVA LG L +G + Sbjct: 317 CGEVLFAVGGWCSG---DAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGS-SYLNSVERYDPKTNQWS------SDVAPTSTCRTSVGVAVLGGYLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRR-----LGVAVAVLGGFLYAVGGS 469 HSP 3 Score: 54.6842 bits (130), Expect = 9.132e-7 Identity = 52/201 (25.87%), Postives = 79/201 (39.30%), Query Frame = 1 Query: 349 KESFSAGTNLFVSGKEIDGAVI---WRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWET-LPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTLDASS-----NEVKVYLKESNSWKKLGTVPVRADAQG 924 ++ G LF G G I RY+ TNEW SM+ RC + + GG + + L+S ERY+ +++ W + + R + Y +GGQD + L E +D K N W + +M S+ R VAV LY + S N V+ Y + N W + + R G Sbjct: 312 RKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSS---YLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGYLYAVGGQDGV-SCLNIVERYDPKENKWTRVASM------STRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLG 502
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: KLH20_XENLA (Kelch-like protein 20 OS=Xenopus laevis OX=8355 GN=klhl20 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.452e-14 Identity = 55/214 (25.70%), Postives = 103/214 (48.13%), Query Frame = 1 Query: 367 GTNLFVSGKEIDGA----VIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTL---DASS--NEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGAT 981 G L+ G + DG ++ RY+ N+W + SM+T R A A G + + GG + + L++ ERYN + + W T+ M +RK + Y +GG+D+ +L+ E ++ +TN W+ + + ++S RS +AV N +L + D ++ ++V+ ++N+W+ G G+ ++ LG + VI T Sbjct: 407 GGYLYAVGGQ-DGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTS---PLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDT-TELSSAERYNPRTNQWSPV------VAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYG------------GMNYRRLGGGVGVIKMT 597 HSP 2 Score: 58.151 bits (139), Expect = 6.366e-8 Identity = 46/168 (27.38%), Postives = 75/168 (44.64%), Query Frame = 1 Query: 496 CGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSS-RSPPLVAVANNELYTLDASS-----NEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGAT 981 CG F GG + + +SS ERY+ +++ W + M ++R +D+ Y +GG D + L E +D KTN W+ D+ +S+ R+ VAV LY + N V+ Y + N W ++ ++ R GVA LG L +G + Sbjct: 311 CGEVLFAVGGWCSG---DAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGS-SYLNSVERYDPKTNQWS------SDVAPTSTCRTSVGVAVLGGYLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRR-----LGVAVAVLGGFLYAVGGS 463 HSP 3 Score: 54.6842 bits (130), Expect = 8.932e-7 Identity = 52/201 (25.87%), Postives = 79/201 (39.30%), Query Frame = 1 Query: 349 KESFSAGTNLFVSGKEIDGAVI---WRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWET-LPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTLDASS-----NEVKVYLKESNSWKKLGTVPVRADAQG 924 ++ G LF G G I RY+ TNEW SM+ RC + + GG + + L+S ERY+ +++ W + + R + Y +GGQD + L E +D K N W + +M S+ R VAV LY + S N V+ Y + N W + + R G Sbjct: 306 RKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSS---YLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGYLYAVGGQDGV-SCLNIVERYDPKENKWTRVASM------STRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLG 496
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Match: KLH20_RAT (Kelch-like protein 20 OS=Rattus norvegicus OX=10116 GN=Klhl20 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.813e-14 Identity = 50/196 (25.51%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 409 VIWRYELPTNEWFKGPSMNTSRCLFASASCGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSSRSPPLVAVANNELYTL---DASS--NEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGAT 981 ++ RY+ N+W + SM+T R A A G + + GG + + L++ ERYN + + W T+ M +RK + Y +GG+D+ +L+ E ++ +TN W+ + + ++S RS +AV N +L + D ++ ++V+ ++N+W+ G G+ ++ LG + VI T Sbjct: 429 IVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTS---PLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDT-TELSSAERYNPRTNQWSPV------VAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYG------------GMNYRRLGGGVGVIKMT 602 HSP 2 Score: 57.7658 bits (138), Expect = 9.434e-8 Identity = 46/168 (27.38%), Postives = 75/168 (44.64%), Query Frame = 1 Query: 496 CGIYAFVAGGLETKTCREVLSSAERYNSESHSWETLPKMIRKRKFCSGCYMDNKFYVIGGQDEQHNDLTCGEFFDQKTNSWNLIPNMLKDILLSSS-RSPPLVAVANNELYTLDASS-----NEVKVYLKESNSWKKLGTVPVRADAQGGWGVAFKSLGNKLLVIGAT 981 CG F GG + + +SS ERY+ +++ W + M ++R +D+ Y +GG D + L E +D KTN W+ D+ +S+ R+ VAV LY + N V+ Y + N W ++ ++ R GVA LG L +G + Sbjct: 316 CGEVLFAVGGWCSG---DAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGS-SYLNSVERYDPKTNQWS------SDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRR-----LGVAVAVLGGFLYAVGGS 468 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_01562 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_01562_La_Tanjil_v1.0 ID=rna-TanjilR_01562_La_Tanjil_v1.0; Name=rna-TanjilR_01562; organism=Lupinus angustifolius; type=mRNA; length=1125bpback to top protein sequence of rna-TanjilR_01562_La_Tanjil_v1.0 >rna-TanjilR_01562_La_Tanjil_v1.0 ID=rna-TanjilR_01562_La_Tanjil_v1.0; Name=rna-TanjilR_01562_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=164bpback to top mRNA from alignment at Chr_LG20-CM007380.1:20919279..20920403+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_01562_La_Tanjil_v1.0 ID=rna-TanjilR_01562_La_Tanjil_v1.0; Name=rna-TanjilR_01562; organism=Lupinus angustifolius; type=mRNA; length=1125bp; location=Sequence derived from: Chr_LG20-CM007380.1:20919279..20920403+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20919279..20920403+ >rna-TanjilR_01562_La_Tanjil_v1.0 ID=rna-TanjilR_01562_La_Tanjil_v1.0; Name=rna-TanjilR_01562; organism=Lupinus angustifolius; type=CDS; length=495bp; location=Sequence derived from: Chr_LG20-CM007380.1:20919279..20920403+ (Lupinus angustifoliusback to top |