rna-TanjilR_06960

Transcript Overview
Namerna-TanjilR_06960
Unique Namerna-TanjilR_06960_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1722
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG01-CM007361.1supercontigChr_LG01-CM007361.1:2118059..2119780 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananR000Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR015Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR028Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR032Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaR0067Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaiR0093Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR0038Cajanus cajan Asha genome v1.0Cajanus cajan
ancrR0058Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0027Pisum sativum Cameor genome v1aPisum sativum
anpsR0036Pisum sativum Cameor genome v1aPisum sativum
anpsR0050Pisum sativum Cameor genome v1aPisum sativum
anpvR0003Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0052Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0095Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0022Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0051Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvuR0061Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0012Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0078Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0003Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0030Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0060Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
antifR0037Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0041Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0044Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvrvR0051Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvssR0057Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0063Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvuaR0025Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0044Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvuaR0066Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ancanR0063Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0032Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0061Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0087Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0004Cicer arietinum
ancarR0030Cicer arietinum
ancarR0072Cicer arietinum
anccaR0018Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0000Vigna umbellata FF25 genome v1.0Vigna umbellata
anccaR0065Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0056Vigna umbellata FF25 genome v1.0Vigna umbellata
anvumR0066Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0042Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvasR0013Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0000Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0044Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0055Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0044Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvstR0053Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anpvfR0003Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0015Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0045Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0090Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anvunR0043Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anvunR0054Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_022783817.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.003G158500.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun08g049900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.4g184440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.001G046400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_01G03445.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr08.247Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat4g032080.1Pisum sativum Cameor genome v1aPisum sativum
Psat4g033880.1Pisum sativum Cameor genome v1aPisum sativum
Vigun08g049900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Ca_21943.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Va07G063450.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun03g368900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.4g139840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigst.03G150000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.03G239100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va01G084990.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr03.1750Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat04G0113300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr03.941Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr01.1000330Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Psat06G0074000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_012718018.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg19716.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_19595.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigan.01G418400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
LR48_mrnaVigan07g243900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_06767Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun03g368900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigst.01G316900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_03G01671.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan01g247000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg35696.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_26199Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_10787Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_06960gene-TanjilG_06960_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06960rna-TanjilR_06960_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_06960_La_Tanjil_v1.0rna-TanjilR_06960_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119699..2119780rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119699..2119780Lupinus angustifoliusCDS
rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119125..2119429rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119125..2119429Lupinus angustifoliusCDS
rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118236..2118926rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118236..2118926Lupinus angustifoliusCDS
rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118059..2118138rna-TanjilR_06960_La_Tanjil_v1.0-CDS-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118059..2118138Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119699..2119780rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119699..2119780Lupinus angustifoliusexon
rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119125..2119429rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2119125..2119429Lupinus angustifoliusexon
rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118236..2118926rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118236..2118926Lupinus angustifoliusexon
rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118059..2118138rna-TanjilR_06960_La_Tanjil_v1.0-exon-Chr_LG01-CM007361.1_La_Tanjil_v1.0-1579734366:2118059..2118138Lupinus angustifoliusexon


Homology
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHIC_ARATH (Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.016e-49
Identity = 112/242 (46.28%), Postives = 151/242 (62.40%), Query Frame = 3
Query:  852 QVARNNNFHGLDLDWEYPSTGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQITSLQNYPGQELANNLDFLNVMTYDLFTSDGYPMVTQPPAPLKNPGGQF-SVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXXXXXXXXXXX----XVKYKDIK----NAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQDSNWALSQAGE 1550
            +VAR+  FHGLDLDWEYPS+ T+ TN G L++EWR+A+  E+ +SGKP LLL+AAV  S+   S+  YP   +A++LD++N+M YD F   G+  VT PPA L +P     S D G   WI Q GLP KK  LG P+YG+ W L++   H+ +A  +  A     ++ Y  I+    + G   VYNST   +Y Y GT+W GYDD QS+  KV YAK +GL GYF+WH+  D N  LS+A  
Sbjct:  125 RVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVL-YPVSAVASSLDWVNLMAYD-FYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWI-QAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAAS 363          

HSP 2 Score: 105.145 bits (261), Expect = 3.772e-23
Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 3
Query:  291 MAESKSLSLLF---FTMLVGFSSAQTAIKGGYWYSESGLKVSDIDASHFTHLFCAFAIL--ENNKVXXXXXXXXXXXTFTQTLLQKKSSIKTLLSIGGGKGPSLAKSFSDMASQASTRKSFIDSSIQVLALCYNIH 683
            M+ +K +SL+    F + +  S AQT +K  YW+  S   V+DID+S FTHLFCAFA L  + N+V++SS++   FSTFTQT+ ++  S+KTLLSIGGG     A  ++ MAS  ++RKSFIDSSI+V A  Y  H
Sbjct:    1 MSSTKLISLIVSITFFLTLQCSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTA--YASMASNPTSRKSFIDSSIRV-ARSYGFH 133          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHIT5_LOTJA (Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.156e-31
Identity = 89/242 (36.78%), Postives = 127/242 (52.48%), Query Frame = 3
Query:  852 QVARNNNFHGLDLDWEYPSTGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQITSLQN----YPGQELANNLDFLNVMTYDLFTSDGYPMVTQPPAPLKNPGGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXXXXXXXXXXX----XVKYKDI----KNAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQDSNWALSQ 1541
             VAR + F+GLDLDWE+P    D +NL LL+KEW  A+  E+ TS K  LLL++AV  +  I+ + N    YP + +   LD+ + M +D   +  +   T   A L +P    S   GI  WI       K +      YG  W L DP  H + A+A   A     ++ Y +I    K+ G +VVY+    + YSY GT W GYDD  S++ KV +A+  GL GYF W I +D +W +S+
Sbjct:  151 HVARKHEFNGLDLDWEWPGDEKDMSNLALLLKEWYKALVVEANTSRKSRLLLTSAVYFNSTISLIGNGPRSYPVRAIRKYLDWASPMCFDY--NGAWANETGFNAALYDPNSNISTKYGIGSWIGSGVPAEKLVMGLP-LYGRAWELKDPNDHGVGAKAVGPAVDTDGSMDYDEILVFNKDTGAKVVYDEVAVSFYSYSGTTWIGYDDGPSITKKVQFARSMGLKGYFFWAIGKDKDWTISK 389          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHT5A_MEDTR (Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.224e-29
Identity = 89/243 (36.63%), Postives = 133/243 (54.73%), Query Frame = 3
Query:  852 QVARNNNFHGLDLDWEYPSTGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQITSL-----QNYPGQELANNLDFLNVMTYDLFTSDGYPMVTQPPAPLKNPGGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDP----IKHXXXXXXXXXXXXVKYKDI----KNAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQDSNWALSQ 1541
            +VAR   F G+DLDWE+P T  D  NLGLL +EW  A+  E+K   KP LLL++AV  +  +  +     ++YP Q +   LD+ + M +D   +  +   T   A L +   + S + G+  WI + G+ P+KL +GL  YG  W L DP    +       A+   G++ Y +I    K +G  VVY+    + YSY GT W GYDD  S++ KV +AK  GL GYF W + +D +W++S+
Sbjct:  137 EVARKYRFDGVDLDWEFPETQQDMFNLGLLYEEWYNALFAEAKVRRKPRLLLTSAVYYNSTVRLIGKHGPRSYPTQAINKYLDWASPMCFDYHGT--WDNNTDFNAALYDSKSEISTNFGLHSWI-KSGVRPEKLVMGLALYGRAWELKDPNVNGVGAEAVGPATDTDGSMNYNEILKFNKQSGANVVYDKVAISFYSYAGTTWIGYDDGPSITTKVRFAKSLGLKGYFFWALGKDKDWSISK 376          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: NFH1_MEDTR (Nod factor hydrolase protein 1 OS=Medicago truncatula OX=3880 GN=NFH1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.045e-28
Identity = 90/246 (36.59%), Postives = 132/246 (53.66%), Query Frame = 3
Query:  852 QVARNNNFHGLDLDWEYPSTGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQIT---SLQNYPGQELANNLDFLNVMTYDLFTSDGYPMVTQPPAPLKNPGGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXX----XXXXXXXXXXVKYKDI----KNAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQD-SNWALSQAGEC 1553
            QVAR   F G+D DWE+P+T  +  +LG L+ +WR AI+ E+ ++ +P LLL+AAV  +         + YP   +  NLD++NVM+YDL  S     VT  P+ + +     SV  G+  WI + G+ P+K+ +G+P YG  W L DP  H +            G + Y  +    K  G +VVY+    + YSY G+ W GYDD  +VS KV +A+   L GYF W    D S+W +S A + 
Sbjct:  138 QVARTFGFDGIDFDWEFPTTTKEMNDLGELLFQWRRAISDETASTSRPPLLLTAAVYFAVNFFLSGERRMYPVDSINKNLDWVNVMSYDLRGSGS--NVTGAPSGMFDSKSNVSVVSGLFSWI-RGGVAPEKIVMGMPLYGKSWKLQDPNVHGIGAPNVGPGPGVDGGMAYFQVVDFNKQMGAKVVYDKETGSVYSYSGSTWIGYDDPFTVSVKVGFAQALKLGGYFFWAAGYDTSDWKVSTASKA 380          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHT5B_MEDTR (Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.719e-24
Identity = 83/240 (34.58%), Postives = 126/240 (52.50%), Query Frame = 3
Query:  855 VARNNNFHGLDLDWEYPSTGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQIT---SLQNYPGQELANNLDFLNVMTYDLFTSDGYPMVTQPPAPLKNPGGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXXXXXXXXXXXXVK----YKDI----KNAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQDS-NWALS 1538
            VAR   F G+DLDWE+P    +  +LG ++ +WR AI+ E  T+G+P LLL+AAV  +   +     + YP   +  NLD++NVM+Y+L         T  P+   +P    SV  G+  WI+  G+ P+KL +G+P YG  W L DP  H + A +      V     Y  +    +    +V Y+    + YSY G+ W GYD+  +VS KV +A+   L GYF W    D+ +W ++
Sbjct:  133 VARTFGFDGIDLDWEFPKNTKEMNDLGEMLFQWRKAISDEGATTGRPPLLLTAAVYFAVNFSIYGEPRMYPVNSINENLDWVNVMSYELRGPRSNK--TGAPSGTFDPKSNVSVVSGLLSWIHS-GVVPEKLVMGMPLYGKSWKLRDPNVHGIGAPSVGSGPGVNGLMAYFQVLDFNRQKSAKVEYDVDTASVYSYSGSTWIGYDNPFTVSIKVGFAQALKLRGYFFWVAGLDTLDWKIA 369          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHIL3_MOUSE (Chitinase-like protein 3 OS=Mus musculus OX=10090 GN=Chil3 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.571e-18
Identity = 82/244 (33.61%), Postives = 113/244 (46.31%), Query Frame = 3
Query:  861 RNNNFHGLDLDWEYP----STGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGS-DQITSLQNYPGQELANNLDFLNVMTYDLF-TSDGYPMVTQPPAPL-KNP-----GGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXXXXXXXXXXXXVKYKD------------IKNAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQD 1520
            R  NF GL+LDW+YP    S   DK    +LVKE R A  +ES     P LLL++  AG  D I S    P  EL+ +LD++ VMTYDL    DGY   T   +PL K+P         +VD  I+ W +      K +      YG  ++LSDP K  + A   +     KY D              N G   V+++     Y+Y+G +W GYD+ +S   K  + K   L G   W ++ D
Sbjct:  128 RQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDVIKSGYKIP--ELSQSLDYIQVMTYDLHDPKDGY---TGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPA-YGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEVWDAPQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMD 365          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHIL4_MOUSE (Chitinase-like protein 4 OS=Mus musculus OX=10090 GN=Chil4 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.597e-18
Identity = 76/243 (31.28%), Postives = 113/243 (46.50%), Query Frame = 3
Query:  861 RNNNFHGLDLDWEYP----STGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAG-SDQITSLQNYPGQELANNLDFLNVMTYDL------FTSDGYPMVTQPPAPLKNPGGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXXXXXXXXXXXXVKYKDIK------------NAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQD 1520
            R  NF GL+LDW+YP    S   DK    +LV+E R A  +ES  +  P LLL++  AG  D I S    P  EL+ +LD++ VMTYDL      +T +  P+   P    K+     +VD  IT W +      K +      YG  ++LSDP K+ +     +     KY + +            N G   ++++T    Y+Y G +W GYD+ +S   K  + K   L G   W ++ D
Sbjct:  128 RQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVQEMRKAFEEESTLNHIPRLLLTSTGAGFIDVIKSGYKIP--ELSQSLDYIQVMTYDLHDPKNGYTGENSPLYKSPYDIGKS--ADLNVDSIITYWKDHGAASEKLIVGFPA-YGHTFILSDPSKNGIGDPTVSAGPPGKYTNEQGLLAYFEICTFLNEGATEIFDATQEVPYAYLGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMD 365          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHIA_MOUSE (Acidic mammalian chitinase OS=Mus musculus OX=10090 GN=Chia PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.520e-17
Identity = 78/243 (32.10%), Postives = 112/243 (46.09%), Query Frame = 3
Query:  861 RNNNFHGLDLDWEYP----STGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQITSLQ-NYPGQELANNLDFLNVMTYDL------FTSDGYPMVTQPPAPLKNPGGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXXXXXXXXXXXXVKYKD------------IKNAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQD 1520
            R   F GLDLDWEYP    S   DK    +LVKE R A  QE+  S +P L+++AAVAG   I+++Q  Y   EL+  LDF++VMTYDL      +T +  P+   P     N     +VD  +  W N      K +      YG  ++L +P  + + A  S    A  Y                 +G   V++++    Y+YK  +W GYD+ +S S K  + K     G   W I+ D
Sbjct:  128 RQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKEMREAFEQEAIESNRPRLMVTAAVAGG--ISNIQAGYEIPELSKYLDFIHVMTYDLHGSWEGYTGENSPLYKYPTETGSN--AYLNVDYVMNYWKNNGAPAEKLIVGFPE-YGHTFILRNPSDNGIGAPTSGDGPAGPYTRQAGFWAYYEICTFLRSGATEVWDASQEVPYAYKANEWLGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLD 365          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHIA_RAT (Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.662e-17
Identity = 84/243 (34.57%), Postives = 112/243 (46.09%), Query Frame = 3
Query:  861 RNNNFHGLDLDWEYP----STGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQITSLQ-NYPGQELANNLDFLNVMTYDLFTS-DGYPMVTQPPAPLKNPGGQ---FSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSDPIKHXXXXXXXXXXXXVKYKDIKNAGGQVVYN-STYFTN-------------YSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQD 1520
            R   F GLDLDWEYP    S   DK    +LVKE R A  QE+  S +P L+++AAVA    I+++Q  Y   EL+  LDF++VMTYDL  S DGY     P   L    G     +VD  +  W +      K +      YG  ++LS+P    + A  S    A  Y   + AG    Y   T+  N             Y+YKG +W GYD+ +S S K  + K     G   W I+ D
Sbjct:  128 RQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKELREAFEQEAIESNRPRLMVTAAVAAG--ISNIQAGYEIPELSQYLDFIHVMTYDLHGSWDGYTGENSPLYKLPTETGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPE-YGHTYILSNPSDTGIGAPTSGNGPAGPYT--RQAGFWAYYEICTFLRNGATQDWDAPQEVPYAYKGNEWVGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLD 365          
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Match: CHIT_CAEEL (Probable endochitinase OS=Caenorhabditis elegans OX=6239 GN=cht-1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.068e-16
Identity = 78/238 (32.77%), Postives = 120/238 (50.42%), Query Frame = 3
Query:  861 RNNNFHGLDLDWEYPSTGTDKTNLGLLVKEWRAAITQESKTSGKPALLLSAAV-AGSDQITSLQNYPGQELANNLDFLNVMTYDLFTS----DGY--PMVTQPPAPLKNPGGQFSVDEGITKWINQXXXXXXXXXXXXXFYGFKWLLSD-----------PIKHXXXXXXXXXXXXVKYKDIKNAGGQVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQD 1520
            R   F G+D+DWEYPS  TD  N   LVKE +AA   E+ ++GK  LL++AAV AG   I +  + P   LA N DF+ +M+YD F +     G+  P+      P +  G  ++VD     W NQ G+P +K+ +G+P YG  W L++           P K   + Q +      ++ ++   G    ++S     Y  +G  W+ YDD +S + K+ Y K +G  G F W ++ D
Sbjct:  167 RTWGFDGIDIDWEYPSGATDMANYVALVKELKAACESEAGSTGKDRLLVTAAVAAGPATIDAGYDIP--NLAPNFDFILLMSYDFFGAWASLVGFNSPLYATTELPAEWNG--WNVDSSARYW-NQKGMPKEKIIVGMPTYGRGWTLNNASAINPGTSGSPAKITQYVQEAGVGAYFEFCEMLANGATRYWDSQSQVPYLVQGNQWWSYDDEESFANKMAYVKREGYGGAFVWTLDFD 399          
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_06960 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CHIC_ARATH5.016e-4946.28Class V chitinase OS=Arabidopsis thaliana OX=3702 ... [more]
CHIT5_LOTJA1.156e-3136.78Class V chitinase CHIT5 OS=Lotus japonicus OX=3430... [more]
CHT5A_MEDTR1.224e-2936.63Class V chitinase CHIT5a OS=Medicago truncatula OX... [more]
NFH1_MEDTR1.045e-2836.59Nod factor hydrolase protein 1 OS=Medicago truncat... [more]
CHT5B_MEDTR7.719e-2434.58Class V chitinase CHIT5b OS=Medicago truncatula OX... [more]
CHIL3_MOUSE1.571e-1833.61Chitinase-like protein 3 OS=Mus musculus OX=10090 ... [more]
CHIL4_MOUSE2.597e-1831.28Chitinase-like protein 4 OS=Mus musculus OX=10090 ... [more]
CHIA_MOUSE1.520e-1732.10Acidic mammalian chitinase OS=Mus musculus OX=1009... [more]
CHIA_RAT1.662e-1734.57Acidic mammalian chitinase OS=Rattus norvegicus OX... [more]
CHIT_CAEEL1.068e-1632.77Probable endochitinase OS=Caenorhabditis elegans O... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011583Chitinase IISMARTSM006362g34coord: 31..351
e-value: 1.4E-83
score: 293.7
IPR029070Chitinase insertion domain superfamilyGENE3D3.10.50.10coord: 264..322
e-value: 2.0E-106
score: 357.8
IPR029070Chitinase insertion domain superfamilySUPERFAMILY54556Chitinase insertion domaincoord: 265..323
NoneNo IPR availableGENE3D3.20.20.80coord: 47..351
e-value: 2.0E-106
score: 357.8
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 35..351
e-value: 1.8E-71
score: 241.4
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 34..367

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_06960_La_Tanjil_v1.0 ID=rna-TanjilR_06960_La_Tanjil_v1.0; Name=rna-TanjilR_06960; organism=Lupinus angustifolius; type=mRNA; length=1722bp
ATGTTAAGTGGTCCAAGCAAAACTATAGTACATCCATATATTGAAATTGT
CTCAAATATCACACCATGTGACATTGGTGTCGGTCCATTTACTTCAACAA
AATCATTCTGAGTTGTGGAAGTGGGTAAAGTGAAGGAATACTAGAGTATG
ATTACTTGTGTAGATAGCTATTTATATCCATCAAGAAACAACACTTATCT
TATTCACTTGAGGAGCTATATATATATATATATATAGAAGTGTGATCAAA
CTCCATCAAGCTAAGGAAACCAAAAACACAACACAACACAATGGCTGAGT
CCAAAAGCCTTTCACTTCTGTTTTTCACTATGCTTGTTGGTTTTTCATCA
GCACAAACTGCCATCAAAGGTGGATATTGGTATTCAGAAAGTGGGCTTAA
GGTTTCTGATATTGATGCCTCCCACTTTACCCATCTCTTTTGTGCTTTTG
CAATCCTTGAAAACAACAAAGTCAGCATTTCTTCTTCTGATGCATCCTCT
TTCTCAACCTTCACCCAAACCCTCCTCCAAAAGAAATCTTCAATCAAAAC
CCTTCTATCCATAGGTGGTGGTAAAGGTCCTTCCCTGGCAAAATCTTTTT
CTGACATGGCTAGCCAAGCCAGTACCCGAAAATCCTTCATAGATTCTTCA
ATACAGGTCTTGGCACTATGTTATAATATTCATTGTGTATTTTGTTTGGG
AATTGATTATGTTATTATGAGTCATATATTAGTATGAGTTATGTCTTTAT
GTGCAATTATGTTTGGATCTTTTATCCTTGGCCTATAGATAGTACTTTTG
TATGTCTGATATATAGCAGAAACTTATTCATGTTTCTCTTATCTTTAATA
ACAGGTAGCTAGAAACAACAACTTCCATGGTCTTGATCTTGATTGGGAGT
ACCCTTCCACAGGCACAGACAAAACCAATCTTGGCTTACTCGTCAAGGAA
TGGCGCGCAGCTATTACACAAGAGTCTAAAACTTCAGGCAAACCAGCATT
GCTGCTATCTGCAGCAGTTGCTGGCTCAGACCAAATCACATCACTACAAA
ACTATCCAGGTCAAGAACTTGCCAACAACTTAGACTTCCTAAATGTAATG
ACTTATGACCTTTTCACTTCTGATGGCTACCCTATGGTGACACAACCACC
TGCTCCTTTGAAAAATCCCGGTGGCCAATTCAGTGTAGATGAAGGGATCA
CCAAGTGGATTAACCAACTAGGATTGCCACCAAAGAAACTTGCTCTTGGT
TTACCTTTCTATGGCTTCAAATGGCTTTTATCCGATCCTATTAAGCACGC
GTTGTTTGCACAAGCTAGTGCAGGAGCTGGAGCAGTGAAGTATAAGGATA
TCAAGAATGCTGGAGGACAGGTCGTGTATAATTCTACTTATTTTACCAAC
TATTCCTATAAAGGAACAGATTGGTATGGCTATGATGATACTCAGAGTGT
ATCTGCCAAGGTTGATTATGCCAAGGGAAAGGGATTGTTTGGTTACTTTG
CTTGGCATATTGAACAAGACAGTAACTGGGCTCTTTCACAAGCTGGTGAG
TGTATATATTGTTTCACTTTAATCTGGAGCTAAGTTTTGTGCAGTTATTA
TGTTAGGCAAATTATTCTAATGGTAGCTTTAATGTGTTGCAGCTTCTCAA
GCATGGGGATCACAGATAGATGCCTTGCAGAGCAAGTTCACTGAGAATAA
AGATAGAGAGCTATCTACATAG
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protein sequence of rna-TanjilR_06960_La_Tanjil_v1.0

>rna-TanjilR_06960_La_Tanjil_v1.0 ID=rna-TanjilR_06960_La_Tanjil_v1.0; Name=rna-TanjilR_06960_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=385bp
MLSGPSKTIVHPYIEIVSNITPCDIGVAQTAIKGGYWYSESGLKVSDIDA
SHFTHLFCAFAILENNKVSISSSDASSFSTFTQTLLQKKSSIKTLLSIGG
GKGPSLAKSFSDMASQASTRKSFIDSSIQVARNNNFHGLDLDWEYPSTGT
DKTNLGLLVKEWRAAITQESKTSGKPALLLSAAVAGSDQITSLQNYPGQE
LANNLDFLNVMTYDLFTSDGYPMVTQPPAPLKNPGGQFSVDEGITKWINQ
LGLPPKKLALGLPFYGFKWLLSDPIKHALFAQASAGAGAVKYKDIKNAGG
QVVYNSTYFTNYSYKGTDWYGYDDTQSVSAKVDYAKGKGLFGYFAWHIEQ
DSNWALSQAASQAWGSQIDALQSKFTENKDRELST
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mRNA from alignment at Chr_LG01-CM007361.1:2118059..2119780-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_06960_La_Tanjil_v1.0 ID=rna-TanjilR_06960_La_Tanjil_v1.0; Name=rna-TanjilR_06960; organism=Lupinus angustifolius; type=mRNA; length=1722bp; location=Sequence derived from: Chr_LG01-CM007361.1:2118059..2119780- (Lupinus angustifolius
ATGTTAAGTGGTCCAAGCAAAACTATAGTACATCCATATATTGAAATTGT CTCAAATATCACACCATGTGACATTGGTGTCGGTCCATTTACTTCAACAA AATCATTCTGAGTTGTGGAAGTGGGTAAAGTGAAGGAATACTAGAGTATG ATTACTTGTGTAGATAGCTATTTATATCCATCAAGAAACAACACTTATCT TATTCACTTGAGGAGCTATATATATATATATATATAGAAGTGTGATCAAA CTCCATCAAGCTAAGGAAACCAAAAACACAACACAACACAATGGCTGAGT CCAAAAGCCTTTCACTTCTGTTTTTCACTATGCTTGTTGGTTTTTCATCA GCACAAACTGCCATCAAAGGTGGATATTGGTATTCAGAAAGTGGGCTTAA GGTTTCTGATATTGATGCCTCCCACTTTACCCATCTCTTTTGTGCTTTTG CAATCCTTGAAAACAACAAAGTCAGCATTTCTTCTTCTGATGCATCCTCT TTCTCAACCTTCACCCAAACCCTCCTCCAAAAGAAATCTTCAATCAAAAC CCTTCTATCCATAGGTGGTGGTAAAGGTCCTTCCCTGGCAAAATCTTTTT CTGACATGGCTAGCCAAGCCAGTACCCGAAAATCCTTCATAGATTCTTCA ATACAGGTCTTGGCACTATGTTATAATATTCATTGTGTATTTTGTTTGGG AATTGATTATGTTATTATGAGTCATATATTAGTATGAGTTATGTCTTTAT GTGCAATTATGTTTGGATCTTTTATCCTTGGCCTATAGATAGTACTTTTG TATGTCTGATATATAGCAGAAACTTATTCATGTTTCTCTTATCTTTAATA ACAGGTAGCTAGAAACAACAACTTCCATGGTCTTGATCTTGATTGGGAGT ACCCTTCCACAGGCACAGACAAAACCAATCTTGGCTTACTCGTCAAGGAA TGGCGCGCAGCTATTACACAAGAGTCTAAAACTTCAGGCAAACCAGCATT GCTGCTATCTGCAGCAGTTGCTGGCTCAGACCAAATCACATCACTACAAA ACTATCCAGGTCAAGAACTTGCCAACAACTTAGACTTCCTAAATGTAATG ACTTATGACCTTTTCACTTCTGATGGCTACCCTATGGTGACACAACCACC TGCTCCTTTGAAAAATCCCGGTGGCCAATTCAGTGTAGATGAAGGGATCA CCAAGTGGATTAACCAACTAGGATTGCCACCAAAGAAACTTGCTCTTGGT TTACCTTTCTATGGCTTCAAATGGCTTTTATCCGATCCTATTAAGCACGC GTTGTTTGCACAAGCTAGTGCAGGAGCTGGAGCAGTGAAGTATAAGGATA TCAAGAATGCTGGAGGACAGGTCGTGTATAATTCTACTTATTTTACCAAC TATTCCTATAAAGGAACAGATTGGTATGGCTATGATGATACTCAGAGTGT ATCTGCCAAGGTTGATTATGCCAAGGGAAAGGGATTGTTTGGTTACTTTG CTTGGCATATTGAACAAGACAGTAACTGGGCTCTTTCACAAGCTGGTGAG TGTATATATTGTTTCACTTTAATCTGGAGCTAAGTTTTGTGCAGTTATTA TGTTAGGCAAATTATTCTAATGGTAGCTTTAATGTGTTGCAGCTTCTCAA GCATGGGGATCACAGATAGATGCCTTGCAGAGCAAGTTCACTGAGAATAA AGATAGAGAGCTATCTACATAG
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Coding sequence (CDS) from alignment at Chr_LG01-CM007361.1:2118059..2119780-

>rna-TanjilR_06960_La_Tanjil_v1.0 ID=rna-TanjilR_06960_La_Tanjil_v1.0; Name=rna-TanjilR_06960; organism=Lupinus angustifolius; type=CDS; length=1158bp; location=Sequence derived from: Chr_LG01-CM007361.1:2118059..2119780- (Lupinus angustifolius
ATGTTAAGTGGTCCAAGCAAAACTATAGTACATCCATATATTGAAATTGT
CTCAAATATCACACCATGTGACATTGGTGTCGCACAAACTGCCATCAAAG
GTGGATATTGGTATTCAGAAAGTGGGCTTAAGGTTTCTGATATTGATGCC
TCCCACTTTACCCATCTCTTTTGTGCTTTTGCAATCCTTGAAAACAACAA
AGTCAGCATTTCTTCTTCTGATGCATCCTCTTTCTCAACCTTCACCCAAA
CCCTCCTCCAAAAGAAATCTTCAATCAAAACCCTTCTATCCATAGGTGGT
GGTAAAGGTCCTTCCCTGGCAAAATCTTTTTCTGACATGGCTAGCCAAGC
CAGTACCCGAAAATCCTTCATAGATTCTTCAATACAGGTAGCTAGAAACA
ACAACTTCCATGGTCTTGATCTTGATTGGGAGTACCCTTCCACAGGCACA
GACAAAACCAATCTTGGCTTACTCGTCAAGGAATGGCGCGCAGCTATTAC
ACAAGAGTCTAAAACTTCAGGCAAACCAGCATTGCTGCTATCTGCAGCAG
TTGCTGGCTCAGACCAAATCACATCACTACAAAACTATCCAGGTCAAGAA
CTTGCCAACAACTTAGACTTCCTAAATGTAATGACTTATGACCTTTTCAC
TTCTGATGGCTACCCTATGGTGACACAACCACCTGCTCCTTTGAAAAATC
CCGGTGGCCAATTCAGTGTAGATGAAGGGATCACCAAGTGGATTAACCAA
CTAGGATTGCCACCAAAGAAACTTGCTCTTGGTTTACCTTTCTATGGCTT
CAAATGGCTTTTATCCGATCCTATTAAGCACGCGTTGTTTGCACAAGCTA
GTGCAGGAGCTGGAGCAGTGAAGTATAAGGATATCAAGAATGCTGGAGGA
CAGGTCGTGTATAATTCTACTTATTTTACCAACTATTCCTATAAAGGAAC
AGATTGGTATGGCTATGATGATACTCAGAGTGTATCTGCCAAGGTTGATT
ATGCCAAGGGAAAGGGATTGTTTGGTTACTTTGCTTGGCATATTGAACAA
GACAGTAACTGGGCTCTTTCACAAGCTGCTTCTCAAGCATGGGGATCACA
GATAGATGCCTTGCAGAGCAAGTTCACTGAGAATAAAGATAGAGAGCTAT
CTACATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR029070Chitinase_insertion_sf
IPR001223Glyco_hydro18_cat
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process