rna-TanjilR_13415
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: CB60C_ARATH (Calmodulin-binding protein 60 C OS=Arabidopsis thaliana OX=3702 GN=CBP60C PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 8.239e-94 Identity = 123/165 (74.55%), Postives = 147/165 (89.09%), Query Frame = 2
Query: 3173 RSSPKTIEGLDGRNLRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGE 3667
RSSPK IEG+ GRNL+L F+SRLS+PLFTGGK+EGEQGA +HVVL+D TG+++T GPEA KLDVVVL+G FN EDD+ W+ EEFE HLVKER+GKRPLLTG++QV+LKEG+GTLGEL FTDNSSWIR RKFRLGL+V+ G+CE +R+REAKT+AFTVKDHRGE
Sbjct: 84 RSSPKRIEGIGGRNLQLQFRSRLSVPLFTGGKIEGEQGAAIHVVLLDMTTGHVLTVGPEASAKLDVVVLDGDFNTEDDDGWSGEEFEGHLVKERQGKRPLLTGDVQVTLKEGVGTLGELIFTDNSSWIRCRKFRLGLRVSSGYCEGMRVREAKTEAFTVKDHRGE 248 HSP 2 Score: 101.679 bits (252), Expect = 8.239e-94 Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 3
Query: 3774 VYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
+YKKHYPPAL DEVWRLEKIGKDG+FHKKLN AG++ V+EFLRL+VKDSQKLR +
Sbjct: 249 LYKKHYPPALDDEVWRLEKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKLRTI 303 HSP 3 Score: 115.161 bits (287), Expect = 1.245e-24 Identity = 85/207 (41.06%), Postives = 124/207 (59.90%), Query Frame = 3
Query: 5253 YAIQSFSGYNDHMVTRYPSQSPIENLNSCNQFDSSLYLSNDQLINSAQQTKTTRNSHGAALXXXXXXXXXXXXXXXXXXXXXXXIQSCTVNPFDDWPHNMDKGVNDFFSEDEIRLRSNEMLENEDMQHLLRLLSMGA---HSSVNT-EDXXXXXXXXXXXXXNFDEGRSRSGRAVVGWLKIKAAMRWGXXXXXXXXXXXXQIEELDE 5861
Y+ + YN + +P QS + + + F +S + DQL+N+ ++++ NS+G ++ S + +N ++DW + ++GV+ F SE+EIR RSNEMLEN+DMQ LLRL SM + +N EDS+ F SF + M +++E RS SG+AVVGWLKIKAAMRWGFFIR+ AA +RAQI +LDE
Sbjct: 421 YSDVTVEAYNQSPASSFPGQSQLAD-TTYMHFGNSSFAPQDQLVNNTHESQSMINSNGGVRLALGPATGSQNQEQLVH-------PPPEINSYNDWSNTCNRGVDGFLSEEEIRARSNEMLENDDMQQLLRLFSMNGGDQQTPLNMGEDSFGFHSFGQTSMADYEEDRSNSGKAVVGWLKIKAAMRWGFFIRRKAAQRRAQIVQLDE 619 HSP 4 Score: 105.916 bits (263), Expect = 9.749e-22 Identity = 47/68 (69.12%), Postives = 59/68 (86.76%), Query Frame = 1
Query: 4180 ILGSGMSNKMWEVLLDHAKTCVLTGKLYVYYPEDTRIVGVIFNNIYELRGLITGEQFFSADSLTDSQK 4383
ILGSGMSN+MWE L +H+KTCVL+ LYVYYPED+ VGV+FNNIYE GLI+G+Q++ ADSL+D+QK
Sbjct: 303 ILGSGMSNRMWETLAEHSKTCVLSEMLYVYYPEDS--VGVVFNNIYEFSGLISGKQYYPADSLSDNQK 368
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: CB60D_ARATH (Calmodulin-binding protein 60 D OS=Arabidopsis thaliana OX=3702 GN=CBP60D PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 6.742e-93 Identity = 135/179 (75.42%), Postives = 154/179 (86.03%), Query Frame = 2
Query: 3134 VVRLVFNSISTKFRSSPKTIEGLDGRNLRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGEC 3670
+ +LV ++T SPK I G DGRNL+LHFKSRLSLPLFTGG+VEGEQGA +HVVLIDANTG VT GPEA +KL+VVVL G FNNEDDEDWTQEEFESH+VKEREGKRPLLTG+L V LKEG+GTLGE+ FTDNSSWIRSRKFRLGL+V G+C+ +RIREAKT+AF+VKDHRGE
Sbjct: 56 LAKLVPTRLTTSSVFSPKRIGGPDGRNLQLHFKSRLSLPLFTGGRVEGEQGATIHVVLIDANTGRPVTVGPEASLKLEVVVLGGDFNNEDDEDWTQEEFESHVVKEREGKRPLLTGDLFVVLKEGVGTLGEIVFTDNSSWIRSRKFRLGLRVPSGYCDGIRIREAKTEAFSVKDHRGEL 234 HSP 2 Score: 90.1225 bits (222), Expect = 6.742e-93 Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 3
Query: 3774 VYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
+YKKHYPPAL+DEVWRLEKIGKDG+FHK+L AG+ TV+ FLR +V+DS KLR +
Sbjct: 234 LYKKHYPPALNDEVWRLEKIGKDGAFHKRLTAAGIVTVEGFLRQLVRDSTKLRAI 288 HSP 3 Score: 117.087 bits (292), Expect = 2.977e-25 Identity = 52/69 (75.36%), Postives = 64/69 (92.75%), Query Frame = 1
Query: 4180 ILGSGMSNKMWEVLLDHAKTCVLTGKLYVYYPEDTRIVGVIFNNIYELRGLITGEQFFSADSLTDSQKV 4386
ILGSGMSNKMW++L++HAKTCVL+GKLY+YY ED+R VGV+FNNIYEL GLIT +Q+ SADSL++SQKV
Sbjct: 288 ILGSGMSNKMWDLLVEHAKTCVLSGKLYIYYTEDSRSVGVVFNNIYELSGLITEDQYLSADSLSESQKV 356 HSP 4 Score: 87.4261 bits (215), Expect = 6.360e-16 Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 3
Query: 5520 VNPFDDWPHNMDKGVNDFFSEDEIRLRSNEMLENEDMQHLLRLLSMGAHSSVNTEDXXXXXXXXXXXXXNFDEGRSRSGRAVVGWLKIKAAMRWGXXXXXXXXXXXXQIEEL 5855
+NPF+DW N+ + NDFFSE+EIR S+++L NEDMQ LL SMG + SF P +EGR RSG+AVVGWLK+KAAMRWGFFIR+ AA +RAQI EL
Sbjct: 488 LNPFEDW-TNLSE--NDFFSEEEIRQTSHDLLANEDMQQLL--FSMGGGKGEDGFTFPSFMQNTPMMQGYDEEGRGRSGKAVVGWLKVKAAMRWGFFIRRKAAERRAQIVEL 594
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: CB60B_ARATH (Calmodulin-binding protein 60 B OS=Arabidopsis thaliana OX=3702 GN=CBP60B PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.319e-91 Identity = 132/164 (80.49%), Postives = 143/164 (87.20%), Query Frame = 2
Query: 3176 SSPKTIEGLDGRNLRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGE 3667
SSPK IEG DGR L+LHFKSRLSLPLFTGGKVEGEQGA +HVVLIDANTG V GPEA KL +VVLEG FN EDDEDWTQEEFESH+VKER GKRPLLTGE+ V+LKEG+GTLGEL FTDNSSWIRSRKFRLGL+V G C+ +RIREAKT+AF VKDHRGE
Sbjct: 81 SSPKRIEGPDGRKLQLHFKSRLSLPLFTGGKVEGEQGAVIHVVLIDANTGRAVVYGPEASAKLHIVVLEGDFNTEDDEDWTQEEFESHVVKERSGKRPLLTGEVYVTLKEGVGTLGELVFTDNSSWIRSRKFRLGLRVVSGCCDGMRIREAKTEAFVVKDHRGE 244 HSP 2 Score: 89.7373 bits (221), Expect = 1.319e-91 Identity = 38/55 (69.09%), Postives = 49/55 (89.09%), Query Frame = 3
Query: 3774 VYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
+YKKHYPPAL+D+VWRL+KIGKDG+FHKKL G+ TV++FLR++VKDS KLR +
Sbjct: 245 LYKKHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSPKLRTI 299 HSP 3 Score: 120.939 bits (302), Expect = 2.534e-26 Identity = 88/188 (46.81%), Postives = 118/188 (62.77%), Query Frame = 3
Query: 5265 SFSGYNDHMVTRYPSQSPIENLNSCNQFD-SSLYLSNDQLINSAQQTKTTRNSH---GAALXXXXXXXXXXXXXXXXXXXXXXXIQSCTVNPFDDWPHNMDKGVNDFFSEDEIRLRSNEMLENEDMQHLLRLLSMGAHSSVNT----EDXXXXXXXXXXXXXNFDEGRSRSGRAVVGWLKIKAAMRWG 5804
+ GY+ + TRY S + N N QF+ +S S DQ + + QT++T N+ G ALGP QSS+S + +P + +N +DW + ++G +DFFSE+EIRLRS+EMLE+EDMQ LRL SMG + + ED Y+FPSF+ +PM +DE R RSGRAVVGWLKIKAAMRWG
Sbjct: 441 AIGGYDQTLATRYHSHPQLLNSNPRAQFEVASCSTSQDQFMGNLHQTQSTINNQHMNGLALGPSQSSTSGYQNINPSS------VHQADLNHLEDWSNPRERGPDDFFSEEEIRLRSHEMLESEDMQQFLRLFSMGGGGNGSATHLPEDGYTFPSFLHTPMQGYDEDRGRSGRAVVGWLKIKAAMRWG 622 HSP 4 Score: 119.783 bits (299), Expect = 5.488e-26 Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 1
Query: 4180 ILGSGMSNKMWEVLLDHAKTCVLTGKLYVYYPEDTRIVGVIFNNIYELRGLITGEQFFSADSLTDSQKV 4386
ILGSGMSNKMW+ L++HAKTCV + KLY+YY ED+R VGV+FNNIYEL GLI+G+Q+FSADSLTDSQKV
Sbjct: 299 ILGSGMSNKMWDALVEHAKTCVQSSKLYIYYAEDSRNVGVVFNNIYELSGLISGDQYFSADSLTDSQKV 367
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: CB60E_ARATH (Calmodulin-binding protein 60 E OS=Arabidopsis thaliana OX=3702 GN=CBP60E PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 4.323e-79 Identity = 116/172 (67.44%), Postives = 140/172 (81.40%), Query Frame = 2
Query: 3152 NSISTKFRSSPKTIEGLDGRNLRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGE 3667
N+ T PK I+ +GRNL+LHF++R+ LFTGGKVEGE+G+ +HVVLIDANTG +V +G E+ KL+VVVLEG FN+EDDEDWT+E FES VKEREGKRP+LTG+ Q+ LKEG+GTLGELTFTDNSSWIRSRKFRLG+K A G+ +S IREAKT+ F VKDHRGE
Sbjct: 68 NAKLTSRSPEPKRIQDRNGRNLQLHFRTRMPPHLFTGGKVEGERGSAIHVVLIDANTGNVVQTGEESASKLNVVVLEGDFNDEDDEDWTREHFESFEVKEREGKRPILTGDTQIVLKEGVGTLGELTFTDNSSWIRSRKFRLGVKPASGYGDSFCIREAKTEPFAVKDHRGE 239 HSP 2 Score: 83.5741 bits (205), Expect = 4.323e-79 Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 3
Query: 3774 VYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
+YKKHYPPA+ DEVWRL++I KDG HKKL A + TV++FLRL+VKD QKLRN+
Sbjct: 240 LYKKHYPPAVHDEVWRLDRIAKDGVLHKKLLKANIVTVEDFLRLLVKDPQKLRNL 294 HSP 3 Score: 97.8265 bits (242), Expect = 3.124e-19 Identity = 44/70 (62.86%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 4180 ILGSGMSNKMWEVLLDHAKTCVLTGKLYVYYPEDTRIVGVIFNNIYELRGLITGEQFFSADSLTDSQKVS 4389
+LGSGMSN+MWE ++HAKTCVL GKLYV+Y + T GV+FN+IYE RGLIT QF S +SL QK+S
Sbjct: 294 LLGSGMSNRMWENTVEHAKTCVLGGKLYVFYTDQTHATGVVFNHIYEFRGLITNGQFLSLESLNHDQKIS 363 HSP 4 Score: 73.559 bits (179), Expect = 1.434e-11 Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 3
Query: 5532 DDW--PHNMDKGVNDFFSEDEIRLRSNEMLENEDMQHLLRLLSMGAHSSVNTEDXXXXX---------XXXXXXXXNFDEGRSR-SGRAVVGWLKIKAAMRWGXXXXXXXXXXXXQIEELD 5858
+DW P +G+ D FSE EIRLRS+EMLE +DMQ LL+ +G ++V T+ + + + R+R SG+AVVGWLK+KAA+RWG FIRK AA +R QI E+D
Sbjct: 481 EDWCPPRAAGQGLEDIFSE-EIRLRSSEMLETDDMQRLLKTFGIGV-NTVGTQGGFGQTDESCYGYSIPYQAQIDNTYRRERNRGSGKAVVGWLKLKAALRWGIFIRKKAAERRPQIVEID 599
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: CB60F_ARATH (Calmodulin-binding protein 60 F OS=Arabidopsis thaliana OX=3702 GN=CBP60F PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 3.424e-76 Identity = 114/172 (66.28%), Postives = 139/172 (80.81%), Query Frame = 2
Query: 3152 NSISTKFRSSPKTIEGLDGRNLRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGE 3667
NS ST + P I+GLDGRNL+L F++R+ LFTGGKVEGEQG+ +HVVLIDANTG ++ +G E+ KL++VVL+G FN+EDD+DWT+E FES VKEREGKRP+LTG+ V +KEG+GTLG+LTFTDNSSWIRSRKFRLG+K A GF IREAKT+ F VKDHRGE
Sbjct: 72 NSKSTSRSTEPNKIQGLDGRNLQLRFRTRMPPHLFTGGKVEGEQGSAIHVVLIDANTGNVIQTGEESMTKLNIVVLDGDFNDEDDKDWTREHFESFEVKEREGKRPILTGDRHVIIKEGVGTLGKLTFTDNSSWIRSRKFRLGVKPATGF----HIREAKTEPFAVKDHRGE 239 HSP 2 Score: 77.7962 bits (190), Expect = 3.424e-76 Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 3
Query: 3774 VYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
+YKKHYPP L DEVWRL+KI KDG+ HKKL + + TV++FL++++KD QKLR++
Sbjct: 240 LYKKHYPPVLHDEVWRLDKIAKDGALHKKLLKSNIVTVEDFLQILMKDPQKLRSL 294 HSP 3 Score: 89.7373 bits (221), Expect = 9.903e-17 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 4180 ILGSGMSNKMWEVLLDHAKTCVLTGKLYVYYPEDTRIVGVIFNNIYELRGLITGEQFFSADSLTDSQKVS 4389
+LGSGMSN+MW+ ++HAKTCVL GKLY YY + T V+FN+IYE +GLI F S++SL QK+S
Sbjct: 294 LLGSGMSNRMWDNTVEHAKTCVLGGKLYAYYTDQTHQTAVVFNHIYEFQGLIANGHFLSSESLNHDQKIS 363 HSP 4 Score: 63.1586 bits (152), Expect = 2.012e-8 Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 3
Query: 5559 GVNDFFSEDEIRLRSNEMLENEDMQHLLRLLSMGAHSSVNTEDXXXXXXXXXXXXXN--FDEGRSRSGRAVVGWLKIKAAMRWGXXXXXXXXXXXXQIEELD 5858
G+ D F+E EIR RS+EMLE ++MQ LL+ + E Y F + + EG +G+AVVGWLK+KAA+RWG FIRK AA +R QI E+D
Sbjct: 462 GLEDIFTE-EIRARSSEMLETDNMQRLLKTFGISGGFGNRDESIYGFSDQYEAQIDKGYMREGGRGAGKAVVGWLKLKAALRWGIFIRKKAAERRPQIVEID 562
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: CB60A_ARATH (Calmodulin-binding protein 60 A OS=Arabidopsis thaliana OX=3702 GN=CBP60A PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 6.123e-55 Identity = 81/161 (50.31%), Postives = 116/161 (72.05%), Query Frame = 2
Query: 3185 KTIEGLDGRNLRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGE 3667
K L+ RNL+L F + LSLP+FT ++EG++G + V LID +TG I +SGP + KL+V V+EG FN+ DWT E+ +++V+EREGK+PLL G + L +GIG + E++FTDNSSW RSRKFRLG+++ F + ++IREA T++F V+DHRGE
Sbjct: 61 KETHPLESRNLQLKFLNNLSLPVFTSARIEGDEGQAIRVGLIDPSTGQIFSSGPASSAKLEVFVVEGDFNSV--SDWTDEDIRNNIVREREGKKPLLNGNVFAVLNDGIGVMDEISFTDNSSWTRSRKFRLGVRIVDQF-DYVKIREAITESFVVRDHRGE 218 HSP 2 Score: 73.1738 bits (178), Expect = 6.123e-55 Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = 3
Query: 3774 VYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
+YKKH+PP+L DEVWRLEKIGKDG+FH++LN + + TV++FL +S KLR V
Sbjct: 219 LYKKHHPPSLFDEVWRLEKIGKDGAFHRRLNLSNINTVKDFLTHFHLNSSKLRQV 273 HSP 3 Score: 63.5438 bits (153), Expect = 1.394e-8 Identity = 28/70 (40.00%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 4180 ILGSGMSNKMWEVLLDHAKTCVLTGKLYVYY-PEDTRIVGVIFNNIYELRGLITGEQFFSADSLTDSQKV 4386
+LG+GMS+KMWE+ LDHA++CVL ++VY P + V+FN + ++ GL+ Q+ A+ L++ +K
Sbjct: 273 VLGTGMSSKMWEITLDHARSCVLDSSVHVYQAPGFQKKTAVVFNVVAQVLGLLVDFQYIPAEKLSEIEKA 342
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: SARD1_ARATH (Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=SARD1 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.200e-51 Identity = 80/176 (45.45%), Postives = 114/176 (64.77%), Query Frame = 2
Query: 3158 ISTKFR---SSPKTIEGLDGRN--LRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFC-ESLRIREAKTDAFTVKDHRGE 3667
IS +FR SS IE + L+L F+ L P+FTG K+ P+ ++L+D + + + P +KLD+V L G F + D WT +EFES+++KER+GKRPLL GE+ V+++ G+ T+GE+ FTDNSSWIRSRKFR+G KVA G + + + EA T+A V+DHRGE
Sbjct: 66 ISKRFRLSRSSSFRIEAPEATTPTLKLIFRKNLMTPIFTGSKISDVDNNPLEIILVDDSNKPVNLNRP---IKLDIVALHGDFPSGDK--WTSDEFESNIIKERDGKRPLLAGEVSVTVRNGVATIGEIVFTDNSSWIRSRKFRIGAKVAKGSSGQGVVVCEAMTEAIVVRDHRGE 236 HSP 2 Score: 78.9518 bits (193), Expect = 5.200e-51 Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 3
Query: 3774 VYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
+YKKH+PP L DEVWRLEKIGKDG+FHKKL++ + TVQ+FL+L V D +LR +
Sbjct: 237 LYKKHHPPMLEDEVWRLEKIGKDGAFHKKLSSRHINTVQDFLKLSVVDVDELRQI 291
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Match: CB60G_ARATH (Calmodulin-binding protein 60 G OS=Arabidopsis thaliana OX=3702 GN=CBP60G PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.786e-39 Identity = 66/152 (43.42%), Postives = 98/152 (64.47%), Query Frame = 2
Query: 3215 LRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTL-GELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGE 3667
L+L F + +FTG K+E E G+P+ + L+DA T +V++GP + ++++V L F +E WT E F +++ +REGKRPLLTG+L V LK G+G + G++ F+DNSSW RSRKFRLG K+ EA+++AF +D RGE
Sbjct: 86 LKLCFINSPPSSIFTGSKIEAEDGSPLVIELVDATTNTLVSTGPFSSSRVELVPLNADFT---EESWTVEGFNRNILTQREGKRPLLTGDLTVMLKNGVGVITGDIAFSDNSSWTRSRKFRLGAKLTGDGAV-----EARSEAFGCRDQRGE 229 HSP 2 Score: 60.077 bits (144), Expect = 8.786e-39 Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 3
Query: 3777 YKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNV 3938
YKKH+PP SDEVWRLEKI KDG +L + TV++F RL + +L N+
Sbjct: 231 YKKHHPPCPSDEVWRLEKIAKDGVSATRLAERKILTVKDFRRLYTVNRNELHNI 284 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_13415 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 8
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_13415_La_Tanjil_v1.0 ID=rna-TanjilR_13415_La_Tanjil_v1.0; Name=rna-TanjilR_13415; organism=Lupinus angustifolius; type=mRNA; length=5864bpback to top protein sequence of rna-TanjilR_13415_La_Tanjil_v1.0 >rna-TanjilR_13415_La_Tanjil_v1.0 ID=rna-TanjilR_13415_La_Tanjil_v1.0; Name=rna-TanjilR_13415_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=639bpback to top mRNA from alignment at Chr_LG01-CM007361.1:22030464..22036327+ Legend: mRNApolypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_13415_La_Tanjil_v1.0 ID=rna-TanjilR_13415_La_Tanjil_v1.0; Name=rna-TanjilR_13415; organism=Lupinus angustifolius; type=mRNA; length=5864bp; location=Sequence derived from: Chr_LG01-CM007361.1:22030464..22036327+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG01-CM007361.1:22030464..22036327+ >rna-TanjilR_13415_La_Tanjil_v1.0 ID=rna-TanjilR_13415_La_Tanjil_v1.0; Name=rna-TanjilR_13415; organism=Lupinus angustifolius; type=CDS; length=1920bp; location=Sequence derived from: Chr_LG01-CM007361.1:22030464..22036327+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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