rna-TanjilR_27435
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 7.353e-36 Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 VLAVKKIDSS LP + ++DFT+IVS I+HL H NVT+L GYCSE+GQHL+VYEFH+NGSLHDFLHL +E SKPLIWN RVKIALGTARALE Sbjct: 443 VLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALE 533 HSP 2 Score: 104.76 bits (260), Expect = 4.727e-21 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 2 Query: 3701 HNAEVKLQTSSVIDTKMFDTSSSINLKPPPIDRHKSFDENE--LSXXXXXXXXXXXXXXNLKSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGKVF 3997 H +Q +++TK DTS S+NL+PPP +RHKSFD+++ + K V K V P+N+ +Y+++DLQ+AT SFSVD+L+GEG+FGRVYRAQF+DGKV Sbjct: 344 HQENKSVQNPPLVETKKLDTSLSMNLRPPPSERHKSFDDDDSTMRKPIVAKKAAVVVPSNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVL 444 HSP 3 Score: 103.605 bits (257), Expect = 1.303e-20 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 6669 NSSRPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQ 6830 +S+R R EQSLVRWATPQLHDIDAL KMVDP LKGLYPVKSLSRFADVIALCVQ Sbjct: 621 DSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQ 674 HSP 4 Score: 75.485 bits (184), Expect = 5.859e-12 Identity = 33/44 (75.00%), Postives = 42/44 (95.45%), Query Frame = 1 Query: 5416 HEVCSPSVVHKNIKSANILLDAELSPHLSGSGLASYIPNADQVI 5547 HEVCSPS+VHKNIKSANILLD+EL+PHLS SGLAS++P A++++ Sbjct: 536 HEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELL 579 HSP 5 Score: 71.633 bits (174), Expect = 9.322e-11 Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 5909 QVLNHNIGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGWKPFD 6046 ++LN N GY APE ++SGQY+LKSDVYSFGVVMLELL+G KPFD Sbjct: 577 ELLNQN-DEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFD 621 HSP 6 Score: 46.595 bits (109), Expect = 8.214e-10 Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 1 Query: 874 ILFQGLNSAPQLG-WPSNGNGDDPCGQYWKGITCSVNRVTEMYILTL 1011 I+F +NS QL W +G DPCGQ WKGITCS +RVT++ + +L Sbjct: 37 IMFSSMNSPGQLSQW--TASGGDPCGQNWKGITCSGSRVTQIKLPSL 81 HSP 7 Score: 39.2762 bits (90), Expect = 8.214e-10 Identity = 25/71 (35.21%), Postives = 34/71 (47.89%), Query Frame = 2 Query: 1094 LSNLGLTGTLPYGLKPLTSLTNL*D**LIHYICSFRHITIFHDFVIFCRDLSNNNLGGTIPYDFPQNVKRL 1306 L +LGL+G+L + L LTS+T D+SNNNLGG +PY P N++RL Sbjct: 78 LPSLGLSGSLGFMLDKLTSVTEF--------------------------DMSNNNLGGDLPYQLPPNLERL 122 HSP 8 Score: 21.557 bits (44), Expect = 8.214e-10 Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 3 Query: 1395 NLANNNLTGNIPFSFSDLTSLTDLCVA 1475 NLANN TG+ +S S + L L +A Sbjct: 123 NLANNQFTGSAQYSISMMAPLKYLNLA 149
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.896e-35 Identity = 68/91 (74.73%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 VLAVKKIDSS LP+ +++DF ++VS I++L HPNVT+LVGYC+E+GQHL+VYEFHKNGSLHDFLHL +E SK L+WN+RVKIALGTARALE Sbjct: 440 VLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALE 530 HSP 2 Score: 113.62 bits (283), Expect = 9.036e-24 Identity = 62/94 (65.96%), Postives = 77/94 (81.91%), Query Frame = 2 Query: 3719 LQTSSVIDTKMFDTSSSINLKPPPIDRHKSFD-ENELSXXXXXXXXXXXXXXNLKSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGKVF 3997 +Q+SS ++TK DTS SINL+PPPIDR+KSFD E+ K V K TV P+N++ YS+ADLQIATGSFSVD+L+GEG+FGRVYRA+FDDGKV Sbjct: 348 IQSSSSVETKKLDTSLSINLRPPPIDRNKSFDDEDSTRKPIAVKKSTVVVPSNVRLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVL 441 HSP 3 Score: 103.605 bits (257), Expect = 1.029e-20 Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 3 Query: 6669 NSSRPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQ 6830 +S+R R EQSLVRWATPQLHDIDAL+KMVDP LKGLYPVKSLSRFADVIALCVQ Sbjct: 618 DSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQ 671 HSP 4 Score: 72.7886 bits (177), Expect = 3.279e-11 Identity = 32/44 (72.73%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 5416 HEVCSPSVVHKNIKSANILLDAELSPHLSGSGLASYIPNADQVI 5547 HEVCSPS+V KNIKSANILLD+EL+PHLS SGLAS++P A++++ Sbjct: 533 HEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTANELL 576 HSP 5 Score: 70.0922 bits (170), Expect = 2.169e-10 Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 2 Query: 5936 GYDAPEVALSGQYTLKSDVYSFGVVMLELLSGWKPFD 6046 GY APEV++SGQY+LKSD+YSFGVVMLELL+G KPFD Sbjct: 582 GYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFD 618 HSP 6 Score: 42.3578 bits (98), Expect = 1.985e-9 Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 1 Query: 877 LFQGLNSAPQLGWPSNGNGDDPCGQYWKGITCSVNRVTEMYI 1002 LF G++S QL + GD PCGQ W+G+TCS +RVT++ + Sbjct: 38 LFSGMHSPAQLTQWTAAAGD-PCGQNWRGVTCSGSRVTQIKL 78 HSP 7 Score: 40.0466 bits (92), Expect = 1.985e-9 Identity = 30/72 (41.67%), Postives = 35/72 (48.61%), Query Frame = 2 Query: 1094 LSNLGLTGTLP-YGLKPLTSLTNL*D**LIHYICSFRHITIFHDFVIFCRDLSNNNLGGTIPYDFPQNVKRL 1306 LS L L+GTL Y L LTSLT L DLS+NNLGG +PY FP N++RL Sbjct: 78 LSGLELSGTLGGYMLDKLTSLTEL--------------------------DLSSNNLGGDLPYQFPPNLQRL 123 HSP 8 Score: 23.8682 bits (50), Expect = 1.985e-9 Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 3 Query: 1395 NLANNNLTGNIPFSFSDLTSLTDL 1466 NLANN TG +S S +T L L Sbjct: 124 NLANNQFTGAASYSLSQITPLKYL 147
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.758e-27 Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 LAVKKIDS++ + SE T IV ++S + H N+ ELVGYCSE G ++LVYE+ +NGSLH+FLHL D +SKPL WNTRV+IALGTARA+E Sbjct: 428 TLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVE 518 HSP 2 Score: 93.9745 bits (232), Expect = 1.161e-17 Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 3 Query: 6669 NSSRPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQVS-TFTPNVGFVIR 6869 + +PR E+SLVRWATPQLHDIDALS + DP L GLYP KSLSRFAD+IALCVQV F P + V+ Sbjct: 603 DGEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVE 670 HSP 3 Score: 61.2326 bits (147), Expect = 1.265e-7 Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 2 Query: 5918 NHNIGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGWKPFD 6046 + N+G GY+APE YT KSDVYSFGVVMLELL+G PFD Sbjct: 561 SQNLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFD 603
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.432e-22 Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 ++A+KKID++ L ++F + VSN+S L HPN+ L GYC+E+GQ LLVYE+ NG+L D LH D+ S L WN RVK+ALGTA+ALE Sbjct: 419 IMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALE 509 HSP 2 Score: 101.679 bits (252), Expect = 3.817e-20 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 6669 NSSRPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQ 6830 +SSR R EQSLVRWATPQLHDIDALSKMVDP+L G+YP KSLSRFAD+IALC+Q Sbjct: 600 DSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQ 653 HSP 3 Score: 65.855 bits (159), Expect = 4.685e-9 Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 5909 QVLNHNIGS-GYDAPEVALSGQYTLKSDVYSFGVVMLELLSGWKPFD 6046 QV +GS GY APE ALSG YT+KSDVY+FGVVMLELL+G KP D Sbjct: 554 QVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLD 600 HSP 4 Score: 65.855 bits (159), Expect = 4.931e-9 Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 1 Query: 5416 HEVCSPSVVHKNIKSANILLDAELSPHLSGSGLASYIPNAD-QVIL*VTGTLCF 5574 HEVC PS+VH+N KSANILLD EL+PHLS SGLA+ PN + QV V G+ + Sbjct: 512 HEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGY 565 HSP 5 Score: 40.0466 bits (92), Expect = 1.680e-7 Identity = 22/47 (46.81%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 871 RILFQGLNSAPQLGWPSNGNGDDPCGQYWKGITCSVNRVTEMYILTL 1011 ++L+ LNS QL NG GD PCG+ WKGITC + V + I L Sbjct: 38 QVLYTSLNSPSQLTNWKNGGGD-PCGESWKGITCEGSAVVTIDISDL 83 HSP 6 Score: 31.9574 bits (71), Expect = 1.680e-7 Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 3 Query: 1395 NLANNNLTGNIPFSFSDLTSLTDLCVA 1475 NLA NNL+GN+P+S S + SL+ + V+ Sbjct: 125 NLARNNLSGNLPYSISAMGSLSYMNVS 151 HSP 7 Score: 27.7202 bits (60), Expect = 1.680e-7 Identity = 21/72 (29.17%), Postives = 31/72 (43.06%), Query Frame = 2 Query: 1091 NLSNLGLTGTLPYGLKPLTSLTNL*D**LIHYICSFRHITIFHDFVIFCRDLSNNNLGGTIPYDFPQNVKRL 1306 ++S+LG++GTL Y L L SL L D+S N++ T+PY P N+ L Sbjct: 79 DISDLGVSGTLGYLLSDLKSLRKL--------------------------DVSGNSIHDTLPYQLPPNLTSL 124
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana OX=3702 GN=SRF4 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.225e-21 Identity = 56/90 (62.22%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 4612 LAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 AVK+IDSS+L E+F+ IVS+IS +HH N+ ELVGYCSE G+++LVYE+ +GSLH FLHL D++SKPL WNTR++IALGTA+A+E Sbjct: 440 FAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIE 529 HSP 2 Score: 74.7146 bits (182), Expect = 9.838e-12 Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 3 Query: 6669 NSSRPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCV 6827 +S RP+ EQSLVRWA PQL D+D L +MVDP L GLY +S+S FAD++++CV Sbjct: 614 DSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICV 666 HSP 3 Score: 62.7734 bits (151), Expect = 3.973e-8 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 5801 ALKIEHVLNQCSLSLLPIDIKLTKKVVKN--SNSVSHGQVLN------HNIGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGWKPFD 6046 A IE++ CS L+ +IK + ++ N + +S + N N+G GY+APE YT KSDVYSFGVVMLELL+G KP+D Sbjct: 525 AKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANFHHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYD 614
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.718e-20 Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 + AVKK+D +F ++V+NI + H N+ ELVGYC+E+ Q LLVYE+ NG+L D LH +DE+ K L WNTRV +ALG ARALE Sbjct: 509 LFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALE 599 HSP 2 Score: 83.5741 bits (205), Expect = 2.102e-14 Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 3 Query: 6678 RPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQ 6830 R R EQ LVRWA PQLHDIDAL KMVDP+L G YP KSLS FAD+I+ CVQ Sbjct: 693 RSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQ 743 HSP 3 Score: 59.6918 bits (143), Expect = 3.693e-7 Identity = 42/88 (47.73%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 5786 PI*HLALKIEHVLNQCSLSLLPIDIKLTKKVVKNSNSVSHGQVLNHNIGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGWKPFDR 6049 PI H K +VL LS+L D L + S S GQ+L GY APE SG YT +SDVYSFGVVMLELL+G +DR Sbjct: 608 PIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLL---AAYGYGAPEFD-SGIYTWQSDVYSFGVVMLELLTGRMSYDR 691
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana OX=3702 GN=SUB PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.874e-16 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 4612 LAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 LAVKK+ +++ +F ++VSN+ L ++ EL+GYC+E+GQ LLVYE+ NGSL D LHL+ + K L WN R+ IALG ++AL+ Sbjct: 522 LAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQ 611 HSP 2 Score: 78.5666 bits (192), Expect = 5.802e-13 Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 6675 SRPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQVS-TFTPNVGFVIR 6869 +RPR Q+L +WA P+LHDIDAL++MVDP+L G YP+KSLSRFAD+I+ +Q+ F P + +++ Sbjct: 697 TRPRGHQTLAQWAIPRLHDIDALTRMVDPSLHGAYPMKSLSRFADIISRSLQMEPGFRPPISEIVQ 762
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.008e-16 Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSE-DFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 + AV+K+D PN+ E F ++V+NI + H N+ +LVG+CSE+ Q LL++E+ +NG+LHD LH++D L WN RV+IAL A+ALE Sbjct: 502 LFAVRKLDKKS-PNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALE 592 HSP 2 Score: 85.5001 bits (210), Expect = 4.773e-15 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 3 Query: 6678 RPRLEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQ 6830 R R EQ LVRWA PQLHDIDAL+KMVDP+LKG YP KSLS FADVI+ CVQ Sbjct: 686 RDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCVQ 736
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: PBL23_ARATH (Probable serine/threonine-protein kinase PBL23 OS=Arabidopsis thaliana OX=3702 GN=PBL23 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.798e-14 Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHD-FLHLEDEYSKPLIWNTRVKIALGTARALE 4881 V+AVK++D + N +F V +S LHH N+ LVGYC++ Q +LVYE+ +NGSL D L L KPL W+TR+K+A G AR LE Sbjct: 107 VVAVKQLDRNGYQGN--REFLVEVMMLSLLHHQNLVNLVGYCADGDQRILVYEYMQNGSLEDHLLELARNKKKPLDWDTRMKVAAGAARGLE 196
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Match: PBL5_ARATH (Probable serine/threonine-protein kinase PBL5 OS=Arabidopsis thaliana OX=3702 GN=PBL5 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.736e-14 Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 4609 VLAVKKIDSSVLPNNLSEDFTDIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALE 4881 V+A+K++D + + +F V +S HPN+ +L+G+C+E Q LLVYE+ GSL D LH+ KPL WNTR+KIA G AR LE Sbjct: 128 VVAIKQLDRNGVQG--IREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLE 216 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_27435 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_27435_La_Tanjil_v1.0 ID=rna-TanjilR_27435_La_Tanjil_v1.0; Name=rna-TanjilR_27435; organism=Lupinus angustifolius; type=mRNA; length=7879bpback to top protein sequence of rna-TanjilR_27435_La_Tanjil_v1.0 >rna-TanjilR_27435_La_Tanjil_v1.0 ID=rna-TanjilR_27435_La_Tanjil_v1.0; Name=rna-TanjilR_27435_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=722bpback to top mRNA from alignment at Chr_LG02-CM007362.1:3193831..3201709+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_27435_La_Tanjil_v1.0 ID=rna-TanjilR_27435_La_Tanjil_v1.0; Name=rna-TanjilR_27435; organism=Lupinus angustifolius; type=mRNA; length=7879bp; location=Sequence derived from: Chr_LG02-CM007362.1:3193831..3201709+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG02-CM007362.1:3193831..3201709+ >rna-TanjilR_27435_La_Tanjil_v1.0 ID=rna-TanjilR_27435_La_Tanjil_v1.0; Name=rna-TanjilR_27435; organism=Lupinus angustifolius; type=CDS; length=2169bp; location=Sequence derived from: Chr_LG02-CM007362.1:3193831..3201709+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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