rna-TanjilR_02501
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH35_ORYSJ (Jasmonic acid-amido synthetase JAR1 OS=Oryza sativa subsp. japonica OX=39947 GN=GH3.5 PE=2 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 3.022e-118 Identity = 195/295 (66.10%), Postives = 235/295 (79.66%), Query Frame = 3 Query: 792 SDEFCKSMFIFF*LDTILLCREYPIKNGKALNFIYSSKQFXXXXXXXXXXXXXNVFRNVSYKCGMKALQSQCCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKILKPNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPL-----NEIELC-----IDSQPLGLTEVKVGEEYEIVITNPAG 1646 +DE ++ + REYPI GKAL F+Y SKQ TKGG+LA TATTN++R YK GMK +QSQCCSPDEVIFGPDF+QSLYCHLLCGLI+ +EV V STFAHS+VH+F+TFE+VWEDLCTDIR+GVL+ +VT PSIR A+SKILKPNPELA+ ++KKC+ LS NWYG+I ++PNAKYVYGIMTGSMEPYLKKLRHYAG LPL++ADYG+SEGW+G+N++P V PE TYAVLPQ+GYFEFIPL E E I+S P+GLTEV+VG+ YE+VITN AG Sbjct: 108 NDELLETTLQIYRTSYAFRNREYPIGQGKALQFVYGSKQVITKGGILATTATTNLYRRQRYKEGMKDIQSQCCSPDEVIFGPDFHQSLYCHLLCGLIYSEEVHSVFSTFAHSLVHAFQTFEEVWEDLCTDIRDGVLSKKVTAPSIREAVSKILKPNPELADSIYKKCIGLS-NWYGVIPALWPNAKYVYGIMTGSMEPYLKKLRHYAGNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLEKPIGEETENSASIHYIESDPVGLTEVEVGKIYEVVITNFAG 401 HSP 2 Score: 257.299 bits (656), Expect = 1.348e-72 Identity = 120/184 (65.22%), Postives = 151/184 (82.07%), Query Frame = 1 Query: 3211 LVQITGLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQKLEIVDFTSHVDLSKEPGHYVIFFEMSGEASEELLSECCNCLDKSFVDAGYISSRKVKLIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAF 3762 + GLYRYRLGDVVK+ FHN+TPEL+FI R SL+L+INIDKNTEKDLQLAVE A++ L +KLE++DFTS V+ S +PG YVIF+E+SG+AS+E+LS C N LD +F+DAGY SRK+K I LELR++R GTF++ILDH+L LG AVSQ+KTPR V P+N+KVLQILS NV Q+Y STA+ Sbjct: 396 ITNFAGLYRYRLGDVVKIARFHNSTPELQFICRRSLVLSINIDKNTEKDLQLAVEEASKFLEGEKLEVMDFTSFVERSSDPGRYVIFWELSGDASDEVLSSCANALDLAFIDAGYTGSRKIKTIGPLELRILRKGTFKEILDHFLSLGGAVSQFKTPRFVNPSNSKVLQILSRNVTQSYFSTAY 579 HSP 3 Score: 128.257 bits (321), Expect = 2.605e-41 Identity = 57/89 (64.04%), Postives = 73/89 (82.02%), Query Frame = 1 Query: 31 NMDKVVEEFESLTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPITTISL 297 + ++ + EFE LT+DA RVQ++TLKKILE NASAEYLQN GL GRTD ES+K+C+PL H D+EPYI RIVDGD + ++TG+PIT +SL Sbjct: 5 SCEETINEFEMLTRDAARVQKDTLKKILEINASAEYLQNFGLGGRTDAESYKSCIPLCVHNDIEPYIQRIVDGDTSPVVTGEPITNLSL 93 HSP 4 Score: 65.0846 bits (157), Expect = 2.605e-41 Identity = 27/35 (77.14%), Postives = 33/35 (94.29%), Query Frame = 2 Query: 416 SSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNR 520 SSGTT GKPK++P+NDEL ETT+QIY+TS+AFRNR Sbjct: 94 SSGTTHGKPKFIPFNDELLETTLQIYRTSYAFRNR 128
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: JAR1_ARATH (Jasmonic acid-amido synthetase JAR1 OS=Arabidopsis thaliana OX=3702 GN=JAR1 PE=1 SV=2) HSP 1 Score: 364.385 bits (934), Expect = 2.564e-111 Identity = 177/286 (61.89%), Postives = 230/286 (80.42%), Query Frame = 3 Query: 792 SDEFCKSMFIFF*LDTILLCREYPIK-NGKALNFIYSSKQFXXXXXXXXXXXXXNVFRNVSYKCGMKALQSQCCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKILKPNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLNEIELCIDSQPLGLTEVKVGEEYEIVITNPAG 1646 +DE ++ F R++PI NGKAL FI+SSKQ+ + GG+ GTATTNV+RN ++K GMK++ S CSPDEVIF PD +Q+LYCHLL G++FRD+VQ V + FAH +VH+FRTFEQVWE++ TDI++GVL++R+TVPS+RTAMSK+L PNPELA + KC+ LS NWYGLI +FPNAKYVYGIMTGSMEPY+ KLRHYAG+LPL++ DYGSSEGWI ANV P+++PE AT+AV+P +GYFEF+P++E + +P+GLT+VK+GEEYE+VITN AG Sbjct: 114 TDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLS-NWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVSETGEG-EEKPVGLTQVKIGEEYEVVITNYAG 397 HSP 2 Score: 269.24 bits (687), Expect = 8.594e-77 Identity = 118/184 (64.13%), Postives = 156/184 (84.78%), Query Frame = 1 Query: 3211 LVQITGLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQKLEIVDFTSHVDLSKEPGHYVIFFEMSGEASEELLSECCNCLDKSFVDAGYISSRKVKLIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAF 3762 + GLYRYRLGDVVKV+GF+N TP+LKFI R +L+L+INIDKNTE+DLQL+VE+A + L E+K+E++DF+S++D+S +PGHY IF+E+SGE +E++L +CCNCLD++F+DAGY+SSRK K I ALELRVV GTF+KI +H+LGLG++ Q+K PRCV P+N KVLQIL ENVV +Y STAF Sbjct: 392 ITNYAGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPGHYAIFWEISGETNEDVLQDCCNCLDRAFIDAGYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSNAKVLQILCENVVSSYFSTAF 575 HSP 3 Score: 113.62 bits (283), Expect = 8.440e-35 Identity = 59/101 (58.42%), Postives = 79/101 (78.22%), Query Frame = 1 Query: 1 MLERVEDFNFNMDKVVEEFESLTKDAERVQRETLKKILEDNASAEYLQNLGLNGR-TDP-ESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPITTISL 297 MLE+VE F+M++V++EF+ +T++A +VQ++TLK+IL N SA YLQN GLNG TDP E+FK+ VPLVT +LEPYI R+VDGD + ILTG P+ ISL Sbjct: 1 MLEKVE--TFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEAFKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAISL 99 HSP 4 Score: 57.7658 bits (138), Expect = 8.440e-35 Identity = 22/35 (62.86%), Postives = 32/35 (91.43%), Query Frame = 2 Query: 416 SSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNR 520 SSGT+QG+PK++P+ DEL E T+Q+++T+FAFRNR Sbjct: 100 SSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNR 134
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH33_ORYSJ (Jasmonic acid-amido synthetase JAR2 OS=Oryza sativa subsp. japonica OX=39947 GN=GH3.3 PE=2 SV=2) HSP 1 Score: 323.553 bits (828), Expect = 9.876e-98 Identity = 171/298 (57.38%), Postives = 220/298 (73.83%), Query Frame = 3 Query: 768 RKFCNIIRSDEFCKSMFIFF*LDTILLCREYPIKNGKALNFIYSSKQFXXXXXXXXXXXXXNVFRNVSYKCGMKALQSQCCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREG-VLNSRVTVPSI-RTAMSKILKPNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLNEIE---LCIDSQPLGLTEVKVGEEYEIVITNPAG 1646 RK+ ++ ++E KS + + RE+P++NGKAL FIYSS++ +TKGGL A TATTNV+R+ +K M+ +QSQCCSPDEVIFGPDF QSLYCHLL GL+ +VQ+VS+TFAHS+V +F+TFE+ WEDLC DIR G V SRVT P++ R + + PNP LA+ V +KC LS NWYG+I ++PNA+YVYGIMTGSME Y+KKLRHYAG LPL+ A+YG+SEGW+GANV P PE AT+ VLP I YFEFIPL + +++P+GLTEV GE YE+V+T AG Sbjct: 113 RKY--LLFNEELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSRETRTKGGLTATTATTNVYRSEEFKATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPSRVTSPAVRRAMAALLAAPNPGLADEVARKCAALS-NWYGVIPALWPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFAG 407 HSP 2 Score: 118.242 bits (295), Expect = 6.236e-35 Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 37 DKVVEEFESLTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPITTISL 297 + V+EEFE +T+DA VQRETL++IL +N EYL+ LGL G TDP +F+A VPL TH DLEPYI RI DGDA+ +LT KP T+ISL Sbjct: 18 EAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISL 104 HSP 3 Score: 53.9138 bits (128), Expect = 6.236e-35 Identity = 24/35 (68.57%), Postives = 31/35 (88.57%), Query Frame = 2 Query: 416 SSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNR 520 SSGTTQGK KY+ +N+EL ++TMQIY+ S+AFRNR Sbjct: 105 SSGTTQGKRKYLLFNEELVKSTMQIYRISYAFRNR 139
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH310_ARATH (Indole-3-acetic acid-amido synthetase GH3.10 OS=Arabidopsis thaliana OX=3702 GN=GH3.10 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.566e-75 Identity = 138/293 (47.10%), Postives = 201/293 (68.60%), Query Frame = 3 Query: 804 CKSMFIFF*LDTILLCREYPIK-NGKALNFIYSSKQFXXXXXXXXXXXXXNVFRNVSYKCGMKALQSQCCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKILKPNPELANLVHKKCVKLSHN--WYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPL----NEIELCID-----SQPLGLTEVKVGEEYEIVITNPAG 1646 ++ F L R YPI+ G+ L FIY+ K+FKT GGL GTATT+ + + +K + +S CSP EVI G DF Q YCHLL GL + +V+ V+S F+++IV +F FE++W ++C DI+EG L+SR+T+P +R A+ +++PNP LA+ + + C++L N W+GLI +++PNAK++ IMTGSM PYL KLRHYAG LPL++ADYGS+E WIG NV+P + PE ++AV+P YFEFIPL N+ ++CID +P+ L++VK+G+EYE+V+T G Sbjct: 121 AQTTLQIFRLSAAYRSRFYPIREGGRILEFIYAGKEFKTLGGLTVGTATTHYYASEEFKTKQETTKSFTCSPQEVISGGDFGQCTYCHLLLGLHYSSQVEFVASAFSYTIVQAFSFFEEIWREICADIKEGNLSSRITLPKMRKAVLALIRPNPSLASHIEEICLELETNLGWFGLISKLWPNAKFISSIMTGSMLPYLNKLRHYAGGLPLVSADYGSTESWIGVNVDPHLPPEDVSFAVIPTFSYFEFIPLYRRQNQSDICIDGDFVEDKPVPLSQVKLGQEYELVLTTFTG 413 HSP 2 Score: 199.134 bits (505), Expect = 1.293e-52 Identity = 96/186 (51.61%), Postives = 132/186 (70.97%), Query Frame = 1 Query: 3211 LVQITGLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQ-KLEIVDFTSHVDLSKEPGHYVIFFEMSGEASEELLSECCNCLDKSFVDAGYISSRKVKLIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAFN 3765 L TGLYRYRLGDVV+V FH TP+L FI R L+LTINIDKNTEKDLQ V+ A++LL + E+VDFTSH D+ PGHYVI++E+ GEA ++ L ECC +D +FVD GY+ SR++ I LELRVV GTF K+ + +G ++Q+KTPRC TN+ +L IL+++ ++ + S+A++ Sbjct: 408 LTTFTGLYRYRLGDVVEVTSFHKGTPKLSFIYRRKLILTINIDKNTEKDLQRVVDKASQLLSRSTRAEVVDFTSHADVIARPGHYVIYWEIRGEADDKALEECCREMDTAFVDYGYVVSRRMNSIGPLELRVVERGTFGKVAERCVGKCGGLNQFKTPRCT--TNSVMLDILNDSTIKRFRSSAYD 591 HSP 3 Score: 75.485 bits (184), Expect = 1.309e-18 Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 37 DKVVEEFESLTKDAERVQRETLKKILEDNASAEYLQN-LG------LNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPITTISL 297 D V+ FE ++++A +VQ ETL++ILE N+ EYL+ LG ++ T F + VP+V+H DL+PYI RI DG+ + +LT +PIT +SL Sbjct: 9 DDVIGWFEHVSENACKVQSETLRRILELNSGVEYLRKWLGTVDVEKMDDYTLETLFTSLVPIVSHADLDPYIQRIADGETSPLLTQEPITVLSL 102 HSP 4 Score: 41.9726 bits (97), Expect = 1.309e-18 Identity = 18/36 (50.00%), Postives = 28/36 (77.78%), Query Frame = 2 Query: 416 SSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNRY 523 SSGTT+G+ KYVP+ +TT+QI++ S A+R+R+ Sbjct: 103 SSGTTEGRQKYVPFTRHSAQTTLQIFRLSAAYRSRF 138
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH312_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica OX=39947 GN=GH3.12 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.208e-69 Identity = 137/316 (43.35%), Postives = 188/316 (59.49%), Query Frame = 3 Query: 771 KFCNIIRSDEFCKSMFIFF*LDTILLCREYPIKNGKALNFIYSSKQFXXXXXXXXXXXXXNVFRNVSYKCGMKALQSQ---CCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLN-SRVTVPSIRTAMSKILK-PNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLN---------------EIELCI----DSQPLGLTEVKVGEEYEIVITNPAG 1646 K ++ +D+ +S FF R +P+++G+ L F+Y S+ TKGGL A T TN+ R+ + M A CSP EV+F PDF +SLYCHLLCGL+ EV+ VS++FAHSIV + + E+VW +LC DIR G + +RVT P++R A++ IL PNP LA+ + ++C L +W G+I ++PNA+YV MTGSME Y+KKLRHYAG +PL++ +Y SSEG IG N PE + VLP YFEFIPL C D+ P+GLT+V VGE YE+V+T G Sbjct: 109 KRKRLLFNDDLLRSSIRFFHASYAFTNRAFPVEDGRVLQFMYGSRHETTKGGLTATTVMTNLLRSEEFTASMAARSRPRLPSCSPSEVVFSPDFDESLYCHLLCGLLLAGEVRAVSASFAHSIVVALQALERVWRELCADIRRGAASPARVTTPAVRRAVAPILAAPNPALADALERRCAALG-DWSGVIPALWPNARYVQATMTGSMEHYVKKLRHYAGGVPLVSGNYASSEGVIGINAEQHAPPESVVFTVLPDAAYFEFIPLKPPCTDAAADDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEVVMTTFTG 423 HSP 2 Score: 212.616 bits (540), Expect = 5.186e-57 Identity = 100/196 (51.02%), Postives = 142/196 (72.45%), Query Frame = 1 Query: 3205 IKLVQITGLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLL---GE--QKLEIVDFTSHVDLSKEPGHYVIFFEMS---GEASEELLSECCNCLDKSF-VDAGYISSRKVKLIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAFN 3765 + + TGLYRYRLGDVVKV GFH+ TP+L+F+ R SL+L+IN+DKN+E DLQLAV++A ++L GE ++LEI D+TSH D S +PGHYV+F+E++ E +L CC+ +D++F DAGY SRK I ALELRV+R G FQ++L HY+ G++ Q+K PRCV P+N VL++L +N + + STA++ Sbjct: 416 VVMTTFTGLYRYRLGDVVKVAGFHHATPKLRFVCRRSLILSINVDKNSEHDLQLAVDSAAKILAGDGENHKQLEIADYTSHADTSSDPGHYVVFWELNGGGEEDGGGVLQRCCDEMDRAFGADAGYAQSRKTCAIGALELRVLRRGAFQEVLRHYVAGGSSAGQFKMPRCVAPSNAGVLRVLKDNTINIFFSTAYD 611 HSP 3 Score: 108.997 bits (271), Expect = 2.116e-28 Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1 Query: 37 DKVVEEFESLTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPITTISL 297 ++++ FE T+DA VQRETL++IL +NA EYL+ LGL G TD SF+A VP+VTH DL+PYI R+ DGDA+ +LT KP+T ISL Sbjct: 15 EEIMAWFERTTRDAADVQRETLRRILAENAGVEYLRELGLAGLTDAGSFRARVPVVTHADLDPYIQRVADGDASPVLTAKPVTAISL 101 HSP 4 Score: 41.2022 bits (95), Expect = 2.116e-28 Identity = 17/35 (48.57%), Postives = 26/35 (74.29%), Query Frame = 2 Query: 416 SSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNR 520 SSGTTQGK K + +ND+L ++++ + S+AF NR Sbjct: 102 SSGTTQGKRKRLLFNDDLLRSSIRFFHASYAFTNR 136
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH312_ARATH (4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana OX=3702 GN=GH3.12 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.275e-45 Identity = 99/262 (37.79%), Postives = 159/262 (60.69%), Query Frame = 3 Query: 864 IKNGKALNFIYSSKQFXXXXXXXXXXXXXNVFRNVSYKCGMKALQSQCCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKILK-PNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLNEIELCIDSQPLGLTEVKVGEEYEIVITNPAG 1646 ++ GK + F+++ ++ T GL A AT++ F++ +K SPDEVI P+ +SLYCHLLCGL+ RDEV S FA +V + + WE+LC++IR G L++ VT + ++S +L P PELA+ + + C + ++W G+++ ++PN KY+ ++TGSM Y+ L +Y +LPL++ YGSSE G N++P PE +Y +P + YFEFIP++ + + + L +VK+G YE V+TN AG Sbjct: 134 VEEGKGMMFLFTKQESMTPSGLPARVATSSYFKSDYFKNRPSNWYYSYTSPDEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELCSNIRSGHLSNWVTDLGCQNSVSLVLGGPRPELADTIEEICNQ--NSWKGIVKRLWPNTKYIETVVTGSMGQYVPMLNYYCNDLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIPMDGGD---KNDVVDLEDVKLGCTYEPVVTNFAG 390 HSP 2 Score: 147.132 bits (370), Expect = 2.165e-35 Identity = 83/208 (39.90%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 3166 VKSVMIKCFF*PIIKLVQITGLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQKLEIVDFTSHVDLSKEPGHYVIFFEMSG-----------EASEELLSECCNCLDKSFVDAGYISSR-KVKLIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLS 3753 ++ V + C + P++ GLYR R+GD+V V GF+N P+ KF+RR +++L+I+ DK E+DL AV A +L L++ DFTS+ D S PGHYV++ E+ E EE LS CC +++S +D Y R K I LE+RVVR GTF ++D ++ GA+ QYKTPRC+ + K LQ+L VV + S Sbjct: 372 LEDVKLGCTYEPVV--TNFAGLYRMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLFKAVSQAKLVLESSGLDLKDFTSYADTSTFPGHYVVYLEVDTKEGEEKETAQFELDEEALSTCCLVMEES-LDNVYKRCRFKDGSIGPLEIRVVRQGTFDSLMDFFISQGASTGQYKTPRCI--KSGKALQVLETCVVAKFFS 574 HSP 3 Score: 58.9214 bits (141), Expect = 2.550e-7 Identity = 30/91 (32.97%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 28 FNMDKVVE-EFESLTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPITTISL 297 F++++ E + + LT + + +Q L++I+ N EYLQ L R D E FK VP+V+++D++PY+ R+V+G+++ +++ + IT L Sbjct: 5 FDINETFEKQLKDLTSNVKSIQDNLLEEIITPNTKTEYLQRF-LIDRFDKELFKKNVPIVSYEDIKPYLDRVVNGESSDVISARTITGFLL 94
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH33_ARATH (Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana OX=3702 GN=GH3.3 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 4.948e-44 Identity = 99/262 (37.79%), Postives = 158/262 (60.31%), Query Frame = 3 Query: 864 IKNGKALNFIYSSKQFXXXXXXXXXXXXXNVFRNVSYKCGMKALQSQCCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKIL-KPNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLNEIELCIDSQPLGLTEVKVGEEYEIVITNPAG 1646 + GKAL F++ + KT GGL A T+ +++ +K + SP+E I PD QS+Y +LCGL+ R EV + + FA ++ + + W++L DI G L+SR++ P+I+ +MSKIL KP+ ELA+ + C + ++W G+I +I+PN KY+ I+TG+M Y+ L +Y+G LP+ Y SSE + G N+ P P +Y ++P + YFEF+P +E+ S+ + L +V+VG+EYE+VIT AG Sbjct: 146 LDKGKALYFLFVKTESKTPGGLPARPVLTSYYKSEQFKRRPNDPYNVYTSPNEAILCPDSSQSMYTQMLCGLLMRHEVLRLGAVFASGLLRAIGFLQTNWKELADDISTGTLSSRISDPAIKESMSKILTKPDQELADFITSVCGQ-DNSWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHHEVP-TEKSELVELADVEVGKEYELVITTYAG 405 HSP 2 Score: 154.451 bits (389), Expect = 1.089e-37 Identity = 75/185 (40.54%), Postives = 127/185 (68.65%), Query Frame = 1 Query: 3226 GLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQKLEIVDFTSHVDLSKEPGHYVIFFEM-----SGEASEELLSECCNCLDKSFVDAGYISSRKV-KLIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAF 3762 GL RYR+GD+++V GF+N+ P+ KF+RR ++LL+I DK E +LQ AVE A+ LLGEQ ++++TS+ + PGHYVI++E+ + ++E+++ CC +++S +++ Y SR K I LE+RVV++GTF++++D+ + GA+++QYK PRCV + T ++++L VV + S A Sbjct: 405 GLNRYRVGDILQVTGFYNSAPQFKFVRRKNVLLSIESDKTDEAELQSAVENASLLLGEQGTRVIEYTSYAETKTIPGHYVIYWELLVKDQTNPPNDEVMARCCLEMEES-LNSVYRQSRVADKSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCV--SFTPIMELLDSRVVSTHFSPAL 586 HSP 3 Score: 72.4034 bits (176), Expect = 1.906e-11 Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 40 KVVEEFESLTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPIT 285 K + E +T++ + VQ++ +++IL N+ EYL+ GL G TD ++FK VP+V + DL+P I RI +GD + IL+ PIT Sbjct: 21 KALRFIEEMTRNVDFVQKKVIREILSRNSDTEYLKRFGLKGFTDRKTFKTKVPVVIYDDLKPEIQRIANGDRSMILSSYPIT 102
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH31_ARATH (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana OX=3702 GN=GH3.1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.420e-44 Identity = 87/212 (41.04%), Postives = 126/212 (59.43%), Query Frame = 3 Query: 1011 SPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKILKPNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLNEIELCIDSQPLGLTEVKVGEEYEIVITNPAG 1646 SP+E I PD +QS+Y +LCGL+ R V V + FA ++ + R + W DI G L+S +T PSIR MS ILKP+P LA + ++C S NW +I I+PN KY+ I+TG+M Y+ L +Y+G LP+ Y SSE + G N+NP P +Y ++P + YFEFIPL ++ + L +V +G+EYE+V+T AG Sbjct: 195 SPNEAILCPDSFQSMYTQMLCGLLDRLSVLRVGAVFASGLLRAIRFLQLHWSRFAHDIELGCLDSEITDPSIRQCMSGILKPDPVLAEFIRRECK--SDNWEKIITRIWPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFIPLG------GTKAVELVDVNIGKEYELVVTTYAG 398 HSP 2 Score: 143.28 bits (360), Expect = 4.418e-34 Identity = 73/186 (39.25%), Postives = 123/186 (66.13%), Query Frame = 1 Query: 3226 GLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQ-KLEIVDFTSHVDLSKEPGHYVIFFEM-----SGEASEELLSECCNCLDKSFVDAGYISSRKV-KLIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAF 3762 GL RYR+GD+++V GFHN+ P+ F+RR ++LL+I+ DK E +LQ AVE A+ +L E+ + ++TS+ D S PGHYV+++E+ + + S E L+ CC +++S +++ Y SR + LE+RVVR+GTF++++D+ + GA+++QYK PRCV T ++++L VV + S + Sbjct: 398 GLCRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQKAVENASSILHEECGSRVAEYTSYADTSTIPGHYVLYWELLVRDGARQPSHETLTRCCLGMEES-LNSVYRQSRVADNSVGPLEIRVVRNGTFEELMDYAISRGASINQYKVPRCVN--FTPIVELLDSRVVSAHFSPSL 580 HSP 3 Score: 73.9442 bits (180), Expect = 6.171e-12 Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 40 KVVEEFESLTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPIT 285 K + E +T++A+ VQ L +IL NA EYL+ L G TD ++FK +P++T++DL+P I RI DGD + IL+ PI+ Sbjct: 21 KALRFIEEMTRNADTVQENLLAEILARNADTEYLRRFNLCGATDRDTFKTKIPVITYEDLQPEIQRIADGDRSPILSAHPIS 102
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica OX=39947 GN=GH3.8 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 6.825e-44 Identity = 86/214 (40.19%), Postives = 127/214 (59.35%), Query Frame = 3 Query: 1011 SPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKILKPNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLNEIELCID--SQPLGLTEVKVGEEYEIVITNPAG 1646 SP I D +QS+Y ++CGL R++V + + FA ++ + R + WE L DI G L RVT PS+R A++ IL P+PELA L+ +C K +W G+I ++PN KY+ I+TG+M Y+ L Y+G LP+ Y SSE + G N+ P P +Y ++P +GYFEF+P++E +Q + L V+VG EYE+VIT AG Sbjct: 202 SPTAAILCADAFQSMYAQMVCGLCQRNDVLRLGAVFASGLLRAIRFLQLNWEQLADDIESGELTPRVTDPSVREAVAAILLPDPELAKLIRAECSK--GDWAGIITRVWPNTKYLDVIVTGAMAQYIPTLEFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVDETGAASGDATQLVDLARVEVGREYELVITTYAG 413 HSP 2 Score: 140.198 bits (352), Expect = 6.127e-33 Identity = 73/186 (39.25%), Postives = 116/186 (62.37%), Query Frame = 1 Query: 3226 GLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQKLEIVDFTSHVDLSKEPGHYVIFFEMSGEAS------EELLSECCNCLDKSFVDAGYISSRKVK-LIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAF 3762 GL RYR+GDV++V GFHN P+ +F+RR ++LL+I DK E +LQ AVE A+ LL +V++TS + PGHYVI++E+ + + + L CC ++++ ++ Y SR I LE+RVVR GTF++++D+ + GA+++QYK PRCV T ++++L VV ++ S A Sbjct: 413 GLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCLEMEEA-LNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCV--TFPPIVELLDSRVVSSHFSPAL 595 HSP 3 Score: 71.633 bits (174), Expect = 2.853e-11 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 64 LTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPIT 285 +T + + VQ L +IL NA EYL GL+G TD +F+A VP+V++ DL+PYI RI +GD + IL+ P++ Sbjct: 36 MTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQRIANGDRSPILSTHPVS 109
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica OX=39946 GN=GH3.8 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 6.825e-44 Identity = 86/214 (40.19%), Postives = 127/214 (59.35%), Query Frame = 3 Query: 1011 SPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSRVTVPSIRTAMSKILKPNPELANLVHKKCVKLSHNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKVAPEMATYAVLPQIGYFEFIPLNEIELCID--SQPLGLTEVKVGEEYEIVITNPAG 1646 SP I D +QS+Y ++CGL R++V + + FA ++ + R + WE L DI G L RVT PS+R A++ IL P+PELA L+ +C K +W G+I ++PN KY+ I+TG+M Y+ L Y+G LP+ Y SSE + G N+ P P +Y ++P +GYFEF+P++E +Q + L V+VG EYE+VIT AG Sbjct: 202 SPTAAILCADAFQSMYAQMVCGLCQRNDVLRLGAVFASGLLRAIRFLQLNWEQLADDIESGELTPRVTDPSVREAVAAILLPDPELAKLIRAECSK--GDWAGIITRVWPNTKYLDVIVTGAMAQYIPTLEFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVDETGAASGDATQLVDLARVEVGREYELVITTYAG 413 HSP 2 Score: 140.198 bits (352), Expect = 6.127e-33 Identity = 73/186 (39.25%), Postives = 116/186 (62.37%), Query Frame = 1 Query: 3226 GLYRYRLGDVVKVMGFHNTTPELKFIRRISLLLTINIDKNTEKDLQLAVEAATRLLGEQKLEIVDFTSHVDLSKEPGHYVIFFEMSGEAS------EELLSECCNCLDKSFVDAGYISSRKVK-LIEALELRVVRSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILSENVVQNYLSTAF 3762 GL RYR+GDV++V GFHN P+ +F+RR ++LL+I DK E +LQ AVE A+ LL +V++TS + PGHYVI++E+ + + + L CC ++++ ++ Y SR I LE+RVVR GTF++++D+ + GA+++QYK PRCV T ++++L VV ++ S A Sbjct: 413 GLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCLEMEEA-LNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCV--TFPPIVELLDSRVVSSHFSPAL 595 HSP 3 Score: 71.633 bits (174), Expect = 2.853e-11 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 64 LTKDAERVQRETLKKILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHQDLEPYIYRIVDGDAASILTGKPIT 285 +T + + VQ L +IL NA EYL GL+G TD +F+A VP+V++ DL+PYI RI +GD + IL+ P++ Sbjct: 36 MTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQRIANGDRSPILSTHPVS 109 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_02501 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_02501_La_Tanjil_v1.0 ID=rna-TanjilR_02501_La_Tanjil_v1.0; Name=rna-TanjilR_02501; organism=Lupinus angustifolius; type=mRNA; length=3768bpback to top protein sequence of rna-TanjilR_02501_La_Tanjil_v1.0 >rna-TanjilR_02501_La_Tanjil_v1.0 ID=rna-TanjilR_02501_La_Tanjil_v1.0; Name=rna-TanjilR_02501_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=577bpback to top mRNA from alignment at Chr_LG02-CM007362.1:3369687..3373454+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_02501_La_Tanjil_v1.0 ID=rna-TanjilR_02501_La_Tanjil_v1.0; Name=rna-TanjilR_02501; organism=Lupinus angustifolius; type=mRNA; length=3768bp; location=Sequence derived from: Chr_LG02-CM007362.1:3369687..3373454+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG02-CM007362.1:3369687..3373454+ >rna-TanjilR_02501_La_Tanjil_v1.0 ID=rna-TanjilR_02501_La_Tanjil_v1.0; Name=rna-TanjilR_02501; organism=Lupinus angustifolius; type=CDS; length=1734bp; location=Sequence derived from: Chr_LG02-CM007362.1:3369687..3373454+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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