rna-TanjilR_02515
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 255.758 bits (652), Expect = 2.315e-90 Identity = 171/556 (30.76%), Postives = 270/556 (48.56%), Query Frame = 2
Query: 7463 KFVLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKDGFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGRP------LAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLGHHFIIRTDQKSLKFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSRRSSYCAISVLQIHDFEEWVEEIKQDDKLQKII-----------------------QDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIPI-----ILKEF-PSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGK-DTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGT 9022
+FV V+LDDIL++ S EEH +HL VL L+ +L + KKC F+ + ++ G+ I I + K A+ +P PK +K FLG+ YYRRF+ KIA+P+ L D QW+ K A D+LK A+ N +L + + + TDAS G+GAVL + Y+S +L + + EL+ ++KA+ +++ G HF +RTD SL L ++ + +W+ LA YDF ++Y +G +N VA+A+SR + D E W K D ++ + L + F +ED+ ++Y+ ++V +PI +++ + +L GGH G+ T +++ + YW +++ ++ C Q KS GLLQPL I W DISMDFV GLP + + ILV VDR +K +F+A T++ + F+ I H FP +I DRD ++ ++ L K + SS HPQTDGQ++ + L LR T
Sbjct: 741 RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLV-------VPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYAST 1288 HSP 2 Score: 103.605 bits (257), Expect = 2.315e-90 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 7174 WRFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
+R CVDYR LNK TI D FP+P I+ LL IG A+IF+ LDL GYHQI M +D K F T G Y + V+PFGL NAPS+F M +
Sbjct: 646 FRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADT 736
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 1.068e-89 Identity = 170/554 (30.69%), Postives = 271/554 (48.92%), Query Frame = 2
Query: 7463 KFVLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKDGFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGRP------LAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLGHHFIIRTDQKSLKFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSRRSSYCAISVLQIHDFEEWVEEIKQDDKLQKII-----------------------QDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIPI-----ILKEF-PSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGK-DTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQT----KVVNRCLEVYL 9004
+FV V+LDDIL++ S EEH +HL VL L+ +L + KKC F+ + ++ G+ I I + K A+ +P PK +K FLG+ YYRRF+ KIA+P+ L D QW+ K A ++LK A+ N +L + + + TDAS G+GAVL + Y+S +L + + EL+ ++KA+ +++ G HF +RTD SL L ++ + +W+ LA YDF ++Y +G +N VA+A+SR + D E W K D ++ + L + F +ED+ ++Y+ ++V +PI +++ + +L GGH G+ T +++ + YW +++ ++ C Q KS GLLQPL I W DISMDFV GLP + + ILV VDR +K +F+A T++ + F+ I H FP +I DRD ++ ++ L K + SS HPQTDGQ+ + +NR L Y+
Sbjct: 767 RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLV-------VPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYV 1312 HSP 2 Score: 103.605 bits (257), Expect = 1.068e-89 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 7174 WRFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
+R CVDYR LNK TI D FP+P I+ LL IG A+IF+ LDL GYHQI M +D K F T G Y + V+PFGL NAPS+F M +
Sbjct: 672 FRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADT 762
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF26_SCHPO (Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-6 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-5 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-9 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.803e-85 Identity = 165/546 (30.22%), Postives = 270/546 (49.45%), Query Frame = 2
Query: 7469 VLVFLDDILVYIHSMEEHKQHLCDVLALLQQNDLKINDKKCIFSQDNLKY*GHXXXXXXXXTDPKKLEAMWLWPIPKDIKSLTTFLGLTGYYRRFVHGYGKIARPLTNLLKKD-GFQWSPKAQYAFDQLKQAMTNLLILAVPDFTKPFVVETDASDTGLGAVLLHEGR-----PLAYWSTTLSDMNQRKYVYDRELMVVVKAVQKWQHYFLG--HHFIIRTDQKSL--KFLTDQRMLGEKQYKWISKLAGYDFEIQYKSGKENSVAEALSR-------------RSSYCAISVLQIHD--FEEWVEEIKQDDKLQKIIQDLIIDPIFHTGCVMEDQKLFYKGKMVFSKNFSRIP-IILKEFPSSLVGGHSGIFRTYKRVASLVYWERMKSDKKNFVAACDVFQRNKSDTLSPAGLLQPLSIPTQVWKDISMDFVGGLPKSMGKDTILVGVDRLTKYVNFLALGHPNTTTEVATVFFQEIVRLHDFPSSIVCDRDPLFLSNFWKALFKAFSTQLKFSSEYHPQTDGQTKVVNRCLEVYLRCLTGTKP 9028
V+ ++DDIL++ S EH +H+ DVL L+ +L IN KC F Q +K+ G+ IS G + + ++ + W PK+ K L FLG Y R+F+ ++ PL NLLKKD ++W+P A + +KQ + + +L DF+K ++ETDASD +GAVL + P+ Y+S +S V D+E++ ++K+++ W+HY F I TD ++L + + ++ +W L ++FEI Y+ G N +A+ALSR +S ++ + I D + V E D KL ++ + D ++D L + N +++ I+K++ H GI + W+ ++ + +V C Q NKS P G LQP+ + W+ +SMDF+ LP+S G + + V VDR +K + T + A +F Q ++ P I+ D D +F S WK ++ +KFS Y PQTDGQT+ N+ +E LRC+ T P
Sbjct: 561 VVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE--DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1104 HSP 2 Score: 89.3521 bits (220), Expect = 1.803e-85 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7177 RFCVDYRALNKITIPDKFPIPVIEELLDEIGGARIFSNLDLRYGYHQIRMREEDIAKIVFRTHEGHY*FMVLPFGLTNAPSSFQSLMNEV 7446
R VDY+ LNK P+ +P+P+IE+LL +I G+ IF+ LDL+ YH IR+R+ D K+ FR G + ++V+P+G++ AP+ FQ +N +
Sbjct: 463 RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTI 552 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_02515 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_02515_La_Tanjil_v1.0 ID=rna-TanjilR_02515_La_Tanjil_v1.0; Name=rna-TanjilR_02515; organism=Lupinus angustifolius; type=mRNA; length=15071bpback to top protein sequence of rna-TanjilR_02515_La_Tanjil_v1.0 >rna-TanjilR_02515_La_Tanjil_v1.0 ID=rna-TanjilR_02515_La_Tanjil_v1.0; Name=rna-TanjilR_02515_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=1001bpback to top mRNA from alignment at Chr_LG02-CM007362.1:3649535..3664605- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_02515_La_Tanjil_v1.0 ID=rna-TanjilR_02515_La_Tanjil_v1.0; Name=rna-TanjilR_02515; organism=Lupinus angustifolius; type=mRNA; length=15071bp; location=Sequence derived from: Chr_LG02-CM007362.1:3649535..3664605- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG02-CM007362.1:3649535..3664605- >rna-TanjilR_02515_La_Tanjil_v1.0 ID=rna-TanjilR_02515_La_Tanjil_v1.0; Name=rna-TanjilR_02515; organism=Lupinus angustifolius; type=CDS; length=3006bp; location=Sequence derived from: Chr_LG02-CM007362.1:3649535..3664605- (Lupinus angustifoliusback to top |