rna-TanjilR_30649
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KNAP2_MALDO (Homeobox protein knotted-1-like 2 OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.686e-28 Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAVFM-----ADGHYRLGP 4865
ESEKV LAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHP NAA++M DGHYRLGP
Sbjct: 331 ESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHYIGDGHYRLGP 397 HSP 2 Score: 119.398 bits (298), Expect = 3.710e-27 Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 1 Query: 4207 PHCEIYTHSC*ADDKCEGVGSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
P I++ S +DKCEG+GSSEEEQ+NS GETE+ IDP+ EDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPS
Sbjct: 237 PPLRIFSPS---EDKCEGIGSSEEEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPS 330 HSP 3 Score: 81.6481 bits (200), Expect = 1.259e-14 Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = 1 Query: 802 EAYYDMLVKYRDELTRPIQEAMDFMQKIETQLNTLCNGNG--PLRIFS 939
EAYYDMLVKYR+ELTRPIQEAMDFM++IETQLN L N N PLRIFS
Sbjct: 196 EAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIFS 243 HSP 4 Score: 72.7886 bits (177), Expect = 8.672e-12 Identity = 69/167 (41.32%), Postives = 85/167 (50.90%), Query Frame = 1 Query: 1 MEEYTNNNNHIRENTGQVPRENFLYTTAVGDXXXXXXXXXXQFPINTFHLQSGGSGHSFQP-DQVRYDS------NVKTES-------------NNNTSQQLQTPIFHYPLLRGSILQPHQTQHG-------GSHSSNEVEEDIKAKIIAHPQYSNLLQVYMDCQKV 420
ME+Y N +H E++G R NFLY + + G +Q INTFHLQS G G DQ + S NVKTE+ NNN S + + H P++ HQ Q+ S SSNEVE IKAKIIAHPQYSNLL+ YMDCQ+V
Sbjct: 1 MEDYNNQMDH--ESSGG--RGNFLYASPNLGGNYGRAASDHQMGINTFHLQSSGGGGGGGSGDQCNFQSPGTHPINVKTEATTSQHGHQKFQYNNNNNSHLVSSSRGHQPVI-------HQLQNNFDLLNDDHSLSSNEVEA-IKAKIIAHPQYSNLLEAYMDCQRV 155 HSP 5 Score: 61.2326 bits (147), Expect = 3.907e-8 Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 545 KVGAPPEVVARMAAAQQDFEARQRSSVRSNLEGSKDPELDQFMVRILFTLISFK 706
+VGAP +VVAR++ A+Q+FEARQRSS S E SKDPELDQFM L+ ++
Sbjct: 154 RVGAPSDVVARLSVARQEFEARQRSSGTSR-ETSKDPELDQFMEAYYDMLVKYR 206
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KN1_SOLLC (Homeotic protein knotted-1 OS=Solanum lycopersicum OX=4081 GN=KN1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.966e-27 Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 1 Query: 4240 ADDKCEGVGSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
++DKCEGVGSSEE+QDNS GETEL IDP+ EDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKL++WWELHYKWPYPS
Sbjct: 202 SEDKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPS 287 HSP 2 Score: 111.694 bits (278), Expect = 8.842e-25 Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAVFMADGHY 4853
ESEKV LAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHP +AA +GHY
Sbjct: 288 ESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQSAAALYMEGHY 345 HSP 3 Score: 75.8702 bits (185), Expect = 5.619e-13 Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 1 Query: 802 EAYYDMLVKYRDELTRPIQEAMDFMQKIETQLNTLCNGNGPLRIFS 939
EAYYDMLVKYR+ELTRP+QEAM+FMQKIE QLN L GN P+RIF+
Sbjct: 158 EAYYDMLVKYREELTRPLQEAMEFMQKIEAQLNML--GNAPVRIFN 201 HSP 4 Score: 65.855 bits (159), Expect = 1.237e-9 Identity = 39/75 (52.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 208 VKTESNNNTSQQLQTPIFHYPLLRGSILQPHQTQH----GGSHSSNEVEEDIKAKIIAHPQYSNLLQVYMDCQKV 420
VKTE +TS T FHYP SI++ H GG + EV E +KAKIIAHPQ SNLL YMDCQKV
Sbjct: 49 VKTEGGGSTSHHNHT--FHYP----SIIRNHHHDSTETSGGGAGAGEVIEALKAKIIAHPQCSNLLDAYMDCQKV 117 HSP 5 Score: 61.6178 bits (148), Expect = 2.789e-8 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 545 KVGAPPEVVARMAAAQQDFEARQRSSVRSNLEGSKDPELDQFMVRILFTLISFKP--FSPLQ 724
KVGAPPEV AR++A +Q+FEARQR S+ ++ + SKDPELDQFM L+ ++ PLQ
Sbjct: 116 KVGAPPEVAARLSAVRQEFEARQRRSL-TDRDVSKDPELDQFMEAYYDMLVKYREELTRPLQ 176
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KNAP1_MALDO (Homeobox protein knotted-1-like 1 OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 7.367e-27 Identity = 56/67 (83.58%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAVFM-----ADGHYRLGP 4865
ESEKV LAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHP NAA++M D HYRLGP
Sbjct: 332 ESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHYTGDVHYRLGP 398 HSP 2 Score: 116.316 bits (290), Expect = 5.180e-26 Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 1 Query: 4207 PHCEIYTHSC*ADDKCEGVGSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
P I++ S +DKCEG+GSSE+EQ+NS GETE+ IDP+ EDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPK+ARQKLLSWWELHYKWPYPS
Sbjct: 238 PPLRIFSPS---EDKCEGIGSSEDEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 331 HSP 3 Score: 81.6481 bits (200), Expect = 1.414e-14 Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = 1 Query: 802 EAYYDMLVKYRDELTRPIQEAMDFMQKIETQLNTLCNGNG--PLRIFS 939
EAYYDMLVKYR+ELTRPIQEAMDFM++IETQLN L N N PLRIFS
Sbjct: 197 EAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIFS 244 HSP 4 Score: 72.0182 bits (175), Expect = 1.398e-11 Identity = 70/164 (42.68%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 1 MEEYTNNNNHIRENTGQVPRENFLYTTAVGDXXXXXXXXXXQFPINTFHLQSGGSGHSFQP-DQVRYDS------NVKTESNNNTSQQLQTPIFHYPLL----------RGSILQPHQTQH-------GGSHSSNEVEEDIKAKIIAHPQYSNLLQVYMDCQKV 420
ME+Y N +H E++G R NFLY + + G +Q INTFHLQS G G DQ + S NVKTE+ T+ Q P F Y RG HQ QH S SSNEVE IKAKIIAHPQYSNL++ YMDCQ+V
Sbjct: 1 MEDYNNQMDH--ESSGG--RGNFLYASPNLGGNYGRAASDHQMGINTFHLQSSGGGGGGGSGDQCNFQSPGTHPINVKTEA---TTSQHGHPKFQYNNNNNNHHLVSSSRGHQPVVHQLQHNLDLQNDDHSLSSNEVEA-IKAKIIAHPQYSNLVEAYMDCQRV 156 HSP 5 Score: 58.9214 bits (141), Expect = 2.299e-7 Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 2 Query: 545 KVGAPPEVVARMAAAQQDFEARQRSSVRSNLEGSKDPELDQFMVRILFTLISFK 706
+VGAP +VV R++ A+Q+FEARQRSS S E SKDPELDQFM L+ ++
Sbjct: 155 RVGAPSDVVPRLSVARQEFEARQRSSGTSR-ETSKDPELDQFMEAYYDMLVKYR 207
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KNAT1_ARATH (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.194e-25 Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL-HPHNAAV-----FMADGHYRLGP 4865
ESEKV LAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL HPH+AA+ +M DG YRLGP
Sbjct: 331 ESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMDGHYMGDGPYRLGP 398 HSP 2 Score: 100.138 bits (248), Expect = 9.891e-21 Identity = 70/86 (81.40%), Postives = 78/86 (90.70%), Query Frame = 1 Query: 4243 DDKCEGVGSSEEEQ-DNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
D K + +GSS+EEQ +NS GETEL IDP+ EDRELKNHLL+KYSGYLSSLKQELSKKKKKGKLPK+ARQKLL+WWELHYKWPYPS
Sbjct: 245 DGKSDNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPS 330 HSP 3 Score: 62.3882 bits (150), Expect = 1.735e-8 Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 1 Query: 802 EAYYDMLVKYRDELTRPIQEAMDFMQKIETQLNTLCNGNGPLRIFSG 942
EAY DMLVKYR+ELTRPIQEAM+F+++IE+QL+ LC P+ I +
Sbjct: 199 EAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLC--QSPIHILNN 243 HSP 4 Score: 61.2326 bits (147), Expect = 3.755e-8 Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 2 Query: 545 KVGAPPEVVARMAAAQQDFEARQRSSVRSNLEGSKDPELDQFMVRILFTLISFK 706
K+GAPP+VV R+ AA+QDFEARQ+ S S S+DPELDQFM L+ ++
Sbjct: 156 KIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYR 209
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KNOSC_ORYSJ (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH15 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.776e-24 Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAV------FMADGHYRLG 4862
E+EK+ LAESTGLDQKQINNWFINQRKRHWKPSEDM F++M+G HP NAA FMADG YRLG
Sbjct: 288 ETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLG 354 HSP 2 Score: 87.4261 bits (215), Expect = 1.140e-16 Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 1 Query: 4240 ADDKCEGVGSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
AD K E VGSSE++ D S E E IDP+ ED+ELK LL+KYSGYLSSL+QE SKKKKKGKLPK+ARQKLL WWELHYKWPYPS
Sbjct: 202 ADGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KNOSC_ORYSI (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH15 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 6.776e-24 Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAV------FMADGHYRLG 4862
E+EK+ LAESTGLDQKQINNWFINQRKRHWKPSEDM F++M+G HP NAA FMADG YRLG
Sbjct: 288 ETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLG 354 HSP 2 Score: 87.4261 bits (215), Expect = 1.140e-16 Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 1 Query: 4240 ADDKCEGVGSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
AD K E VGSSE++ D S E E IDP+ ED+ELK LL+KYSGYLSSL+QE SKKKKKGKLPK+ARQKLL WWELHYKWPYPS
Sbjct: 202 ADGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: RSH1_MAIZE (Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.671e-23 Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAV------FMADGHYRLG 4862
E+EK+ LAESTGLDQKQINNWFINQRKRHWKPSEDM F++M+G HP NAA FM DG YRLG
Sbjct: 284 ETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMRDGMYRLG 350 HSP 2 Score: 87.4261 bits (215), Expect = 9.979e-17 Identity = 62/86 (72.09%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 4240 ADDKCEGVGSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
AD K EGVGSSE++ D + E + IDP+ ED+ELK LL+KYSGYLSSL+QE SKKKKKGKLPK+ARQKLL WWELHYKWPYPS
Sbjct: 198 ADGKSEGVGSSEDDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 283
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KNOS6_ORYSJ (Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 2.552e-22 Identity = 49/68 (72.06%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAVFMADGH-------YRLG 4862
ES+KV LAESTGLD KQINNWFINQRKRHWKPS++MQF++MDG HP NAA F DGH YRLG
Sbjct: 294 ESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAAFYMDGHFINDGGLYRLG 361 HSP 2 Score: 88.5817 bits (218), Expect = 4.774e-17 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 1 Query: 4264 GSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
GSSEE+Q+ S GETEL ID D+ELK+HLL+KYSGYLSSLKQELSKKKKKGKLPKDARQ+LL+WWELHYKWPYPS
Sbjct: 216 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPS 293 HSP 3 Score: 64.6994 bits (156), Expect = 2.895e-9 Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 1 Query: 802 EAYYDMLVKYRDELTRPIQEAMDFMQKIETQLNTLCNGNGPLR 930
EAY++MLVKYR+ELTRP+QEAM+F++++ETQLNTL LR
Sbjct: 168 EAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLR 210
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: KNOX3_HORVU (Homeobox protein KNOX3 OS=Hordeum vulgare OX=4513 GN=KNOX3 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.725e-20 Identity = 43/58 (74.14%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNAAVFMADGHY 4853
ES+KV LAESTGLD KQINNWFINQRKRHWKP+++MQF++MD HP NAA +M DGH+
Sbjct: 298 ESQKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQFVMMDAYHPPNAAFYM-DGHF 354 HSP 2 Score: 87.0409 bits (214), Expect = 1.380e-16 Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 1 Query: 4261 VGSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
GSSEE+Q+ S GETEL ID D+ELK+HLL+KYSGYLSSLKQELSKKKKKGKLPK+ARQ+LLSWWE+HYKWPYPS
Sbjct: 219 TGSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPS 297 HSP 3 Score: 63.5438 bits (153), Expect = 6.676e-9 Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 1 Query: 802 EAYYDMLVKYRDELTRPIQEAMDFMQKIETQLNTLCNGNGPLR 930
EAY++MLVKYR+ELTRP+QEAM+F++++ETQLN+L LR
Sbjct: 172 EAYHEMLVKYREELTRPLQEAMEFLRRVETQLNSLSISGRSLR 214
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Match: LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.237e-19 Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 3 Query: 4680 ESEKVTLAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPH 4820
ES+K+ LAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD HPH
Sbjct: 289 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPH 335 HSP 2 Score: 70.4774 bits (171), Expect = 3.286e-11 Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 4264 GSSEEEQDNSDGETELSVIDPQTEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXDARQKLLSWWELHYKWPYPS 4497
GSS+EE D ++ S IDPQ EDRELK LLRKYSGYL SLKQE KK+KKGKLPK+ARQ+L+ WW H KWPYPS
Sbjct: 216 GSSDEEVDVNN-----SFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPS 288 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_30649 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_30649_La_Tanjil_v1.0 ID=rna-TanjilR_30649_La_Tanjil_v1.0; Name=rna-TanjilR_30649; organism=Lupinus angustifolius; type=mRNA; length=4868bpback to top protein sequence of rna-TanjilR_30649_La_Tanjil_v1.0 >rna-TanjilR_30649_La_Tanjil_v1.0 ID=rna-TanjilR_30649_La_Tanjil_v1.0; Name=rna-TanjilR_30649_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=374bpback to top mRNA from alignment at Chr_LG03-CM007363.1:23843900..23848767+ Legend: mRNApolypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_30649_La_Tanjil_v1.0 ID=rna-TanjilR_30649_La_Tanjil_v1.0; Name=rna-TanjilR_30649; organism=Lupinus angustifolius; type=mRNA; length=4868bp; location=Sequence derived from: Chr_LG03-CM007363.1:23843900..23848767+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:23843900..23848767+ >rna-TanjilR_30649_La_Tanjil_v1.0 ID=rna-TanjilR_30649_La_Tanjil_v1.0; Name=rna-TanjilR_30649; organism=Lupinus angustifolius; type=CDS; length=1125bp; location=Sequence derived from: Chr_LG03-CM007363.1:23843900..23848767+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|