rna-TanjilR_30631
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Match: NPGR1_ARATH (Protein NPGR1 OS=Arabidopsis thaliana OX=3702 GN=NPGR1 PE=1 SV=1) HSP 1 Score: 424.091 bits (1089), Expect = 1.243e-133 Identity = 213/398 (53.52%), Postives = 287/398 (72.11%), Query Frame = 2 Query: 1049 ESAKECRIILDIVGSAFPNGMLEGISEDCKLQEMFHRALELLPNLWIKAGFLDEAVTAYRRALVKPWNLELPRLAALQKDLATTLLYGGVEVGPPSPLQVSGPATLKSNVEESXXXXXXXMSKMAIQEIVWDAEVMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACGSSEETHRPHFPSFLFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPE--VIFSLGLENAFQRNLDAAYDNIMIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDEAGRTDQLELLRLKAVLQISQQQPKQAIETYRILLALIQAKRE 2236 E+A+EC+IILD+V +A P+GM +GIS KLQ++F +ALELLP LW KAG E + +YRRAL +PWNL+ RLA QK LA LLYG VE P K N+EE+I+LL++L+ KM + +I WD E+MDHLT+ALS+TG FE LA+ +EQ LPG+Y R ERWY L+LCYSAAG ++ A+NLL+ A G SE PH P LFGAKLCS+ P ++ +GI F+ ++DL +Q+EH L + KFLG+CYG AAR S LDSER Q++SL LN AA G DPE VIF+L +ENA QRN+ AA D + YS + G S +GW+ LA+++SA++R KDAE+I+DF ++EAG +++ELLRLKAVLQ++Q+QPK+A++T LL LI+A+ + Sbjct: 153 EAAEECKIILDVVENALPSGMPDGISGFAKLQDIFQKALELLPLLWKKAGNHHETIASYRRALSRPWNLDPQRLAVTQKSLALVLLYGSVEACP------------KDNIEEAIVLLMLLVKKMVVGDIQWDPELMDHLTYALSMTGQFEVLANYLEQTLPGVYTRGERWYLLSLCYSAAGIDKAAINLLKMALGPSESRQIPHIPLLLFGAKLCSKDPKHSRDGINFAHRLLDLGNSQSEHLLSQAHKFLGVCYGNAARSSKLDSERVFLQKKSLFSLNEAAKRGKADPELDVIFNLSVENAVQRNVQAALDGAVEYSSMVGGVSTKGWKHLAIVLSAEKRLKDAESILDFTMEEAGDIEKIELLRLKAVLQMAQEQPKKAMKTCSSLLGLIRAQEK 538 HSP 2 Score: 145.206 bits (365), Expect = 2.209e-34 Identity = 66/102 (64.71%), Postives = 88/102 (86.27%), Query Frame = 3 Query: 2910 GMLFESQSLYKEALVSFSVSLSIEPDYIPSIISTAELLLKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKREGSLQQAADFFQAAYELKLSAPVQKF 3215 G+ E++SL++EAL+SF +SLSIEPD++PSI+S AE+++K G +SLP A+SFLMNALRL+P NHDAW LG V+K++G QQAA+F+QAAYEL+LSAPVQ F Sbjct: 592 GLCLEAKSLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAYELELSAPVQSF 693 HSP 3 Score: 117.472 bits (293), Expect = 1.311e-25 Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = 2 Query: 506 LNYECNEFQEARALLGRLEYQQGNFEAALQVFQGIDIKGLIPKMIRAISERTKQNKSHSKADIAVIPNVMSLHSVSLLLEAVLLKAKSLEGLGRY 790 LNYE EARALLGRLEYQ+GNF+AALQVF+GIDIK L P++I+AI E+T K SKA + V P MS+HSVSLLLEA+LLKA+SLE LG Y Sbjct: 63 LNYE-----EARALLGRLEYQRGNFDAALQVFKGIDIKVLTPRIIKAIVEKTLPCKPRSKA-VIVPPTTMSMHSVSLLLEAILLKARSLEELGSY 151 HSP 4 Score: 106.686 bits (265), Expect = 3.364e-22 Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 1 MLCACSGEQHKFEEAPQSPESLATRDFSASGLSSRT--GDWESKLDEAQVEEAESTLKEALSLNYE 192 MLCACSGEQ +FE+ P SPESLATRDFSASGLSSR GDW+SKL++ QV+EAESTLKEALSLNYE Sbjct: 1 MLCACSGEQFRFEDQPGSPESLATRDFSASGLSSRNGGGDWDSKLEDIQVDEAESTLKEALSLNYE 66
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Match: NPG1_ARATH (Protein NPG1 OS=Arabidopsis thaliana OX=3702 GN=NPG1 PE=1 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.137e-94 Identity = 204/483 (42.24%), Postives = 287/483 (59.42%), Query Frame = 2 Query: 944 SRYKINSIM*IIYLIGLPLNGTDFNVMTLVLYHLSESAKECRIILDIVGSAFPNGMLEGISEDCKLQEMFHRALELLPNLWIKAGFLDEAVTAYRRALVKPWNLELPRLAALQKDLATTLLYGGVEVGPPS-PLQVSGPATLKSNVEESXXXXXXXMSKMAIQEIVWDAEVMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACGSSEETHRPHFPSFLFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPEVIFSLGLENAFQRNLDAAYDNIMIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDEAGRTDQLELLRLKAVLQISQQQPKQAIETYRILLALIQAKRELW-----LQDMNIDQAKEFK--HEVCILWGGTIITLVYNDIKVDGKEAAAL 2368 S++ N ++ IYL L L ++E+A EC+ +LD V F G+ + D KLQE A+ELLP LW ++G EA++AYRRAL+ WNL+ A +QKD A LL+ GVE PPS Q+ G ++N+EE+ILLL+IL+ K + + WD V +HLTFALS+ LA ++E+++PG++ R ERW LAL YSAAG N A+NLLRK+ E+ + L AKLCS+ PS A EG +++ I+ A+ +EH G G + LG+C G A++ D ERS Q ESL L+ A + +P++IF LG++ A QRNL AA + D T GS +GW+ LAL++SAQQRF +AE + D ALDE + DQ LLRLKA L+ISQ P +A+ETYR LLAL+QA+R+ + L M D+ EF+ H + L+ +ND++V K+A L Sbjct: 117 SQHAANLVLEAIYLKAKSLQK---------LGRITEAAHECKSVLDSVEKIFQQGIPDA-QVDNKLQETVSHAVELLPALWKESGDYQEAISAYRRALLSQWNLDNDCCARIQKDFAVFLLHSGVEASPPSLGSQIEGSYIPRNNIEEAILLLMILLKKFNLGKAKWDPSVFEHLTFALSLCSQTAVLAKQLEEVMPGVFSRIERWNTLALSYSAAGQNSAAVNLLRKSLHKHEQPD--DLVALLLAAKLCSEEPSLAAEGTGYAQRAINNAQGMDEHLKGVGLRMLGLCLGKQAKVPTSDFERSRLQSESLKALDGAIAFEHNNPDLIFELGVQYAEQRNLKAASRYAKEFIDATGGSVLKGWRFLALVLSAQQRFSEAEVVTDAALDETAKWDQGPLLRLKAKLKISQSNPTEAVETYRYLLALVQAQRKSFGPLRTLSQMEEDKVNEFEVWHGLAYLYSSLSH---WNDVEVCLKKAGEL 584 HSP 2 Score: 80.1073 bits (196), Expect = 6.927e-14 Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 2910 GMLFESQSLYKEALVSFSVSLSIEPDYIPSIISTAELLLKLGMQ---SLPIARSFLMNALRLEPTNHDAWFNLGLVSKREGSLQQAADFFQAAYELKLSAPVQKF 3215 G ++E + +K AL +F L ++ +P ++ LL + G +LP+ARS L +ALR++PTN AW+ LG+V K +G + A D FQAA L+ S P++ F Sbjct: 596 GRMWEGRKEFKPALAAFLDGLLLDGSSVPCKVAVGALLSERGKDHQPTLPVARSLLSDALRIDPTNRKAWYYLGMVHKSDGRIADATDCFQAASMLEESDPIESF 700 HSP 3 Score: 77.7962 bits (190), Expect = 3.444e-13 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 527 FQEARALLGRLEYQQGNFEAALQVFQGIDIKGLIPKMIRAI---SERTKQNKSHSKADIAVIPNVMSLHSVSLLLEAVLLKAKSLEGLGRYTGIA 802 F+EARALLGRLEYQ+GN E AL+VF+GID++ I ++ ++ TK+N+ +S H+ +L+LEA+ LKAKSL+ LGR T A Sbjct: 57 FEEARALLGRLEYQRGNLEGALRVFEGIDLQAAIQRLQVSVPLEKPATKKNRPREPQ------QSVSQHAANLVLEAIYLKAKSLQKLGRITEAA 145
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Match: NPGR2_ARATH (Protein NPGR2 OS=Arabidopsis thaliana OX=3702 GN=NPGR2 PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 6.981e-66 Identity = 157/400 (39.25%), Postives = 234/400 (58.50%), Query Frame = 2 Query: 1034 LYHLSESAKECRIILDIVGSAFPNGMLEGISEDCKLQEMFHRALELLPNLWIKAGFLDEAVTAYRRALVKPWNLELPRLAALQKDLATTLLYGGVEVGPPS-PLQVSGPATLKSNVEESXXXXXXXMSKMAIQEIVWDAEVMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACGSSEETHRPHFPSFLFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPEVIFSLGLENAFQRNLDAAYDNIMIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDEAGRTDQLELLRLKAVLQISQQQPKQAIETYRILLALIQAK 2230 L E+A+ CR+ILDIV ++ G + ++ D KLQE +A+ELLP LW A +A+ +YRRAL+ W L+ A +QK+ A LLY G E PP+ Q G ++NVEE+ILLL++L+ K+ ++ I WDA ++DHL+FAL++ G LA + E++ P + D+ E ++ L+LCY AG AL LLRK E+ +R L +K+C + A EG+ ++R+ I + G R LGI ++R++ ++ER Q E + L A + +P V+ L LENA QR LD+A + S W LLA ++SAQ+RF DAETIVD AL+E G+ +Q +LLRLKA L++++ + K AI+TY LLAL+Q + Sbjct: 175 LGRFQEAAESCRVILDIVETSLAEGASDNVTGDIKLQETLTKAVELLPELWKLADSPRDAILSYRRALLNHWKLDPETTARIQKEYAVFLLYSGEEAVPPNLRSQTEGSFIPRNNVEEAILLLMLLLRKVNLKRISWDAAILDHLSFALTIAGDLTALAKQFEELSPELLDQRELYHTLSLCYQGAGEGLVALGLLRKLFSEREDPNRT--SGLLMASKICGERSGLAEEGLDYARKAIGNLGKECSQLDGAARFVLGITLTESSRMAVTETERIARQSEGIQALESADMT---NPRVVHRLALENAEQRKLDSALAYAKEALKLGAESDLEVWLLLARVLSAQKRFSDAETIVDAALNETGKWEQGKLLRLKAKLRLAKGEVKDAIKTYTQLLALLQVQ 569 HSP 2 Score: 94.7449 bits (234), Expect = 1.688e-23 Identity = 47/108 (43.52%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 2904 IAGMLFESQSLYKEALVSFSVSLSIEPDYIPSIISTAELLLKLGMQS-LPIARSFLMNALRLEPTNHDAWFNLGLVSKREG---SLQQAADFFQAAYELKLSAPVQKF 3215 I G+L+ + +EA+ +F+ +L I+P ++PS+ S AE+LL++G +S + + RSFLM ALR++ NH AW+NLG + K EG S+Q+A + FQAA L+ + PV+ F Sbjct: 631 IEGVLYNRRGQLEEAMEAFTTALDIDPMHVPSLTSKAEILLEVGNRSGIAVVRSFLMEALRIDRLNHSAWYNLGKMFKAEGSVSSMQEAVECFQAAVTLEETMPVEPF 738 HSP 3 Score: 38.5058 bits (88), Expect = 1.688e-23 Identity = 16/44 (36.36%), Postives = 28/44 (63.64%), Query Frame = 1 Query: 2650 LEMEAWQDLATIYRDIGSLLDAKACVNKAQFIEFFSPRSWHITG 2781 LE+ W DLA IY ++ DA++C+++++ I +S +HI G Sbjct: 590 LELGTWHDLAHIYINLSQWRDAESCLSRSRLIAPYSSVRYHIEG 633 HSP 4 Score: 96.6709 bits (239), Expect = 5.445e-19 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 2 Query: 506 LNYECNEFQEARALLGRLEYQQGNFEAALQVFQGIDIKGLIPKMIRAISER-TKQNKSHSKADIAVIPN-VMSLHSVSLLLEAVLLKAKSLEGLGRY 790 LNYE EARALLGR+EYQ+GN EAAL+VF+GIDI G+ KM A++ R ++++ SK + P+ MS H+VSLL EA+ LKAKSL+ LGR+ Sbjct: 87 LNYE-----EARALLGRIEYQKGNIEAALRVFEGIDINGITVKMKTALTVREDRKHRRRSKGGFSTAPSPAMSKHAVSLLFEAIFLKAKSLQRLGRF 178
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Match: TTC7B_HUMAN (Tetratricopeptide repeat protein 7B OS=Homo sapiens OX=9606 GN=TTC7B PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 5.210e-12 Identity = 75/257 (29.18%), Postives = 122/257 (47.47%), Query Frame = 2 Query: 1451 VMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACG-SSEETHRPHFPSFLFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPEVIFSLGLENAFQRNLDAAYDNIMIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDEAGRTDQLELLRLKAVLQISQQQPKQAIETYRILLAL 2218 V D LT AL G +E L++ +E+ + ++ WY AL AAG + A+ +L++ ++ P L AKLC + E KF++ V+D+ + +E F +G LG+ Y A ++L + + QR++L RA D + F L L+ A R + A + + G A LLAL++SAQ+ + DA I+D AL E + LL K LQ + P +A+ T + +L + Sbjct: 365 VYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIP-----LLAAKLCMGSLHWLEEAEKFAKTVVDVGEKTSE-FKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQ-GDDANSLHLLALLLSAQKHYHDALNIIDMALSE--YPENFILLFSKVKLQSLCRGPDEALLTCKHMLQI 612
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Match: TTC7A_HUMAN (Tetratricopeptide repeat protein 7A OS=Homo sapiens OX=9606 GN=TTC7A PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 7.338e-12 Identity = 75/262 (28.63%), Postives = 122/262 (46.56%), Query Frame = 2 Query: 1445 AEVMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACGSSEETHRPHFPSF-LFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPEVIFSLGLENAFQRNLDAAYDNIMIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDEAGRTDQLELLRLKAVLQISQQQPKQAIETYRILLALIQA 2227 A + D L+ L G + L++ +E+ + + WY +AL A G + A++LLR+ RP P+ L AK+C + E F+ VI L + E FL +G LG+ Y A + L S++ R++L L RA DP+VI + L+ A R + +A + + V A LLAL+ SAQ+ + A +V+ A+ E + L+ K L+ + P++A+ T R +L L Q Sbjct: 380 AAIYDLLSITLGRRGQYVMLSECLERAMKFAFGEFHLWYQVALSMVACGKSAYAVSLLRECV-----KLRPSDPTVPLMAAKVCIGSLRWLEEAEHFAMMVISLGEEAGE-FLPKGYLALGLTYSLQATDATLKSKQDELHRKALQTLERAQQLAPSDPQVILYVSLQLALVRQISSAMEQLQEALKVR-KDDAHALHLLALLFSAQKHHQHALDVVNMAITE--HPENFNLMFTKVKLEQVLKGPEEALVTCRQVLRLWQT 632 HSP 2 Score: 61.6178 bits (148), Expect = 4.098e-8 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 2892 RLCAIAGMLFESQSLYKEALVSFSVSLSIEPDYIPSIISTAELLLKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKREGSLQQAADFFQAAYELKLSAPVQKF 3215 RL + G L E++ LYKEAL ++ PD + + S +L +LG +SL A+ L +A+ + T H+AW LG V + +G + A D F A EL+ S+PV F Sbjct: 753 RLAEVKGNLEEAKQLYKEAL-------TVNPDGVRIMHSLGLMLSRLGHKSL--AQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTALELEASSPVLPF 851
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Match: TTC7B_MOUSE (Tetratricopeptide repeat protein 7B OS=Mus musculus OX=10090 GN=Ttc7b PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.021e-10 Identity = 66/221 (29.86%), Postives = 105/221 (47.51%), Query Frame = 2 Query: 1451 VMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACG-SSEETHRPHFPSFLFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPEVIFSLGLENAFQRNLDAAYDNIMIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDE 2110 V D LT AL G +E L++ +E+ + ++ WY AL AAG + A+ +L++ ++ P L AKLC + E KF++ V+D+ + +E F +G LG+ Y A ++L + QR++L RA D + F L L+ A R + A + + G A LLAL++SAQ+ + DA I+D AL E Sbjct: 365 VYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIP-----LLAAKLCVGSLHWLEEAEKFAKTVVDVGEKTSE-FKAKGYLALGLTYSLQATDASLRGMQEGLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQ-GDDANSLHLLALLLSAQKHYHDALNIIDMALSE 578
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Match: TTC7A_MOUSE (Tetratricopeptide repeat protein 7A OS=Mus musculus OX=10090 GN=Ttc7a PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.019e-10 Identity = 70/264 (26.52%), Postives = 121/264 (45.83%), Query Frame = 2 Query: 1451 VMDHLTFALSVTGMFETLADRVEQILPGIYDRAERWYFLALCYSAAGHNEEALNLLRKACGSSEETHRPHFPSFLFGAKLCSQHPSYAHEGIKFSREVIDLAKNQNEHFLGEGRKFLGICYGAAARLSALDSERSIFQRESLDFLNRAAVNGNGDPEVIFSLGLENAFQRNLDAAYDNI-----MIYSDVTIGSSARGWQLLALIVSAQQRFKDAETIVDFALDEAGRTDQLELLRLKAVLQISQQQPKQAIETYRILLALIQA 2227 + D L+ L G + L++ +E+ + + WY +AL A G + A++LLR+ C + + P P L AK+C + E F+ VI L + E L +G LG+ Y A + L S++ R++L L RA DP++IF + L+ A R + +A + + M D AL+ SAQ+ ++ A +++ A+ E + L+ K L+ + P++A+ T R +L L Q Sbjct: 383 IYDLLSITLGRRGQYVMLSECLERAMKCAFGEFHLWYQVALSMVACGKSAYAVSLLRE-CMKLQPSD-PTVP--LMAAKVCIGSLHWLEEAEHFATVVIGLGEEAGES-LPKGYLALGLTYSLQATDATLKSKQDELHRKALQTLERARELAPDDPQIIFYVALQLALVRQISSAMERLQEALTMCRDDANALHLL------ALLFSAQKYYQHALDVINMAITE--HPENFNLMFTKVKLEQVLKGPEEALVTCRQMLRLWQT 633 HSP 2 Score: 58.9214 bits (141), Expect = 2.365e-7 Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 2892 RLCAIAGMLFESQSLYKEALVSFSVSLSIEPDYIPSIISTAELLLKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKREGSLQQAADFFQAAYELKLSAPVQKF 3215 RL + G E++ LYKEAL ++ PD + + S +L +LG +SL A+ L +A+ + T H+AW LG V + +G + A D F A EL+ S+PV F Sbjct: 753 RLAEVKGSFEEAKQLYKEAL-------TVNPDGVRIMHSLGLMLSQLGHKSL--AQKVLRDAVERQSTFHEAWQGLGEVLQDQGQNEAAVDCFLTALELEASSPVLPF 851 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_30631 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 7 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_30631_La_Tanjil_v1.0 ID=rna-TanjilR_30631_La_Tanjil_v1.0; Name=rna-TanjilR_30631; organism=Lupinus angustifolius; type=mRNA; length=3221bpback to top protein sequence of rna-TanjilR_30631_La_Tanjil_v1.0 >rna-TanjilR_30631_La_Tanjil_v1.0 ID=rna-TanjilR_30631_La_Tanjil_v1.0; Name=rna-TanjilR_30631_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=716bpback to top mRNA from alignment at Chr_LG03-CM007363.1:23988709..23991929- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_30631_La_Tanjil_v1.0 ID=rna-TanjilR_30631_La_Tanjil_v1.0; Name=rna-TanjilR_30631; organism=Lupinus angustifolius; type=mRNA; length=3221bp; location=Sequence derived from: Chr_LG03-CM007363.1:23988709..23991929- (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:23988709..23991929- >rna-TanjilR_30631_La_Tanjil_v1.0 ID=rna-TanjilR_30631_La_Tanjil_v1.0; Name=rna-TanjilR_30631; organism=Lupinus angustifolius; type=CDS; length=2151bp; location=Sequence derived from: Chr_LG03-CM007363.1:23988709..23991929- (Lupinus angustifoliusback to top |